Pregenerated sensors for DDIT4L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046818Ensembl transcript IDs: ENSMUST00000053855.8, ENSMUST00000165845.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATTGCAGTAAGAGGCACACTTCTCGTGTCTCCTGGGCACGGGTGTaGGGAGACCACCAGGCAGGGAAGCCATGCTCTTGTCACTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: HCSKRHTSRVSWARV*GDHQAGKPCSCHCD Trigger: ATCACAGTGACAAGAGCATGGCTTCCCTGCCTGGTGGTCTCCCCACACCCGTGCCCAGGAGACACGAGAAGTGTGCCTCTTACTGCAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CCA 90 bp | CCATCATGTAATCATTGCAGTAAGAGGCACACTTCTCGTGTCTCCTaGGCACGGGTGTGGGGAGACCACCAGGCAGGGAAGCCATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PSCNHCSKRHTSRVS*ARVWGDHQAGKPCS Trigger: AGAGCATGGCTTCCCTGCCTGGTGGTCTCCCCACACCCGTGCCCAGGAGACACGAGAAGTGTGCCTCTTACTGCAATGATTACATGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 90 bp | GTGAGACACACAGAAGGAAAAGGGCCTAAATCTGGGATTTCCTGGTaGGGGCAAGCAGGCAAACTACAAATGACTGGCTGGATAGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: VRHTEGKGPKSGISW*GQAGKLQMTGWIAS Trigger: TGAAGCTATCCAGCCAGTCATTTGTAGTTTGCCTGCTTGCCCTCACCAGGAAATCCCAGATTTAGGCCCTTTTCCTTCTGTGTGTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 90 bp | ATCCAGTTCCTAGAAAAGACCAGAGATGAGCTAACTGCCATGTGGTaGGACACTTCACTGGAGAGGAAGCATCTTGGTGGCACAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: IQFLEKTRDELTAMW*DTSLERKHLGGTKQ Trigger: CTGCTTTGTGCCACCAAGATGCTTCCTCTCCAGTGAAGTGTCTCACCACATGGCAGTTAGCTCATCTCTGGTCTTTTCTAGGAACTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 90 bp | GTGATGTTAAGGAAAGGTGATCCAGTTCCTAGAAAAGACCAGAGATaGGCTAACTGCCATGTGGTGAGACACTTCACTGGAGAGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: VMLRKGDPVPRKDQR*ANCHVVRHFTGEEA Trigger: TGCTTCCTCTCCAGTGAAGTGTCTCACCACATGGCAGTTAGCTCATCTCTGGTCTTTTCTAGGAACTGGATCACCTTTCCTTAACATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 90 bp | CCCGAAAATGTTACTTTCCATGACCCAAGGAAGAAAAGACCTTGCTaGATAGAACAGAGTTACGTGGAAGGTAAATTGTCTCATGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: PENVTFHDPRKKRPC*IEQSYVEGKLSHGH Trigger: ATGGCCATGAGACAATTTACCTTCCACGTAACTCTGTTCTATTCAGCAAGGTCTTTTCTTCCTTGGGTCATGGAAAGTAACATTTTCGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 90 bp | AAGCCATGCTCTTGTCACTGTGATGTTTATTCGCTCTATGTAAGGTaGTGTTTTAATCCAGCGGATCAATTTAACTGTACCCTCTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: KPCSCHCDVYSLYVR*CFNPADQFNCTLLC Trigger: ACACAAGAGGGTACAGTTAAATTGATCCGCTGGATTAAAACATCACCTTACATAGAGCGAATAAACATCACAGTGACAAGAGCATGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CCA 90 bp | TTCTTTTTCCTCCTTATTCCATTCTATCCCATATGGACACATATGTaGGCAATTTGCTCTCTTGAATTATGTCTTAAAAGCTGGACAAAA | + |
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Preference number: 1 (lower is better) Translates to: FFFLLIPFYPIWTHM*AICSLELCLKSWTK Trigger: TTTTGTCCAGCTTTTAAGACATAATTCAAGAGAGCAAATTGCCCACATATGTGTCCATATGGGATAGAATGGAATAAGGAGGAAAAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGTCCTGGGCACGGGTGTaGGGAGACCACCAGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RRTRELLTGKRSMSMPEKSWARV*GDHQAG Trigger: CCCTGCCTGGTGGTCTCCCCACACCCGTGCCCAGGA...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCATTGAAAAGATGGCTCTCAGAGAGGGAGGGAGGGGAGGAGAGAGAGAGGTGGGTTGCTATGGGTaGGACACACAGAAGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PVIEKMALREGGRGGEREVGCYG*DTQKEK Trigger: CTTTTCCTTCTGTGTGTCTCACCCATAGCAACCCAC...CTCTCTCTCTCCTCCCCTCCCTCCCTCTCTGAGAGCCATCTTTTCAATGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGACTGGCCCAGTCTTGTaGAGACTAGCTCCGTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: RRTRELLTGKRSMSMPEKTGPVL*RLAPWY Trigger: GTACCACGGAGCTAGTCTTCACAAGACTGGGCCAGT...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACTCTGGGATTTCCTGGTaGGGGCAAGCAGGCAAACTA | + |
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Preference number: 2 (lower is better) Translates to: SVVATTSQSQVRLCQYKHSGISW*GQAGKL Trigger: TAGTTTGCCTGCTTGCCCTCACCAGGAAATCCCAGA...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCATTGAAAAGATGGCTCTCAGAGAGGGAGGGAGGGGAGGAGAGAGAGAGAATAACAGCAAGCCCTaGGCACATGAAAGTCAAATT | + |
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Preference number: 2 (lower is better) Translates to: PVIEKMALREGGRGGERENNSKP*AHESQI Trigger: AATTTGACTTTCATGTGCCCAGGGCTTGCTGTTATT...CTCTCTCTCTCCTCCCCTCCCTCCCTCTCTGAGAGCCATCTTTTCAATGACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACGGAGAGGAAGCATCTTaGTGGCACAAAGCAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: SVVATTSQSQVRLCQYKHGEEAS*WHKAAM Trigger: CATTGCTGCTTTGTGCCACCAAGATGCTTCCTCTCC...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGTTGTCCCAGCCAAGCTaGTGCCTGAGGTATACAAAC | + |
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Preference number: 2 (lower is better) Translates to: RRTRELLTGKRSMSMPEKLSQPS*CLRYTN Trigger: GTTTGTATACCTCAGGCACCAGCTTGGCTGGGACAA...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCATTGAAAAGATGGCTCTCAGAGAGGGAGGGAGGGGAGGAGAGAGAGAGCATATGTGGGCAATTTaGTCTCTTGAATTATGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PVIEKMALREGGRGGEREHMWAI*SLELCL Trigger: AAGACATAATTCAAGAGAGCAAATTGCCCACATATG...CTCTCTCTCTCCTCCCCTCCCTCCCTCTCTGAGAGCCATCTTTTCAATGACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACCTGTCATTGAAAAGATaGCTCTCAGAGAGGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SVVATTSQSQVRLCQYKHLSLKR*LSEREG Trigger: TCCCTCCCTCTCTGAGAGCCATCTTTTCAATGACAG...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACTCGCTCTATGTAAGGTaGTGTTTTAATCCAGCGGAT | + |
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Preference number: 2 (lower is better) Translates to: SVVATTSQSQVRLCQYKHSLYVR*CFNPAD Trigger: ATCCGCTGGATTAAAACATCACCTTACATAGAGCGA...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGATGCTCTTGTCACTGTaGTGTTTATTCGCTCTATGT | + |
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Preference number: 2 (lower is better) Translates to: RRTRELLTGKRSMSMPEKMLLSL*CLFALC Trigger: ACATAGAGCGAATAAACATCACAGTGACAAGAGCAT...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACCTAGGAAAACCAAGTTaGCACAATACTACAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SVVATTSQSQVRLCQYKHLGKPS*HNTTKA Trigger: TGCCTTTGTAGTATTGTGTCAACTTGGTTTTCCTAG...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACCCATCATGTAATCATTaGAGTAAGAGGCACACTTCT | + |
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Preference number: 2 (lower is better) Translates to: SVVATTSQSQVRLCQYKHPSCNH*SKRHTS Trigger: AGAAGTGTGCCTCTTACTGCAATGATTACATGATGG...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGATATGGACACATATGTaGGCAATTTGCTCTCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: RRTRELLTGKRSMSMPEKIWTHM*AICSLE Trigger: TTCAAGAGAGCAAATTGCCCACATATGTGTCCATAT...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CAA 90 bp | CCTGGGCACATGAAAGTCAAATTAGGCAAAGTGGATCTTGCTCTGTaGCTAAGACTACCTGCTAAATATGAGACCAAATATAAAATTAAA | + |
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Preference number: 2 (lower is better) Translates to: PGHMKVKLGKVDLAL*LRLPAKYETKYKIK Trigger: TTTAATTTTATATTTGGTCTCATATTTAGCAGGTAGTCTTAGCAACAGAGCAAGATCCACTTTGCCTAATTTGACTTTCATGTGCCCAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CCA 72 bp | AAGAGGCACACTTCTCGTGTCTCCTGGGCACGGGTGTaGGGAGACCACCAGGCAGGGAAGCCATGCTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: KRHTSRVSWARV*GDHQAGKPCSC Trigger: ACAAGAGCATGGCTTCCCTGCCTGGTGGTCTCCCCACACCCGTGCCCAGGAGACACGAGAAGTGTGCCTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CCA 72 bp | AATCATTGCAGTAAGAGGCACACTTCTCGTGTCTCCTaGGCACGGGTGTGGGGAGACCACCAGGCAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: NHCSKRHTSRVS*ARVWGDHQAGK Trigger: CTTCCCTGCCTGGTGGTCTCCCCACACCCGTGCCCAGGAGACACGAGAAGTGTGCCTCTTACTGCAATGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR GCA 72 bp | GCACGGGTGTGGGGAGACCACCAGGCAGGGAAGCCATaGTCTTGTCACTGTGATGTTTATTCGCTCTATGTA | + |
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Preference number: 3 (lower is better) Translates to: ARVWGDHQAGKP*SCHCDVYSLYV Trigger: TACATAGAGCGAATAAACATCACAGTGACAAGAGCATGGCTTCCCTGCCTGGTGGTCTCCCCACACCCGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CCA 72 bp | TGCACATCATCTTGTCAGGTCCTGTCATTGAAAAGATaGCTCTCAGAGAGGGAGGGAGGGGAGGAGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: CTSSCQVLSLKR*LSEREGGEERE Trigger: CTCTCTCTCCTCCCCTCCCTCCCTCTCTGAGAGCCATCTTTTCAATGACAGGACCTGACAAGATGATGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 72 bp | CAGGATGAAGACATTTGTCCCAGCCAAGCTGGTGCCTaGGGTATACAAACTCATACTGAAGGCCTAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QDEDICPSQAGA*GIQTHTEGLGR Trigger: CCTGCCTAGGCCTTCAGTATGAGTTTGTATACCTCAGGCACCAGCTTGGCTGGGACAAATGTCTTCATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 72 bp | CAGATCAACAGGGTTTTGCCTACTGGCCCAGTCTTGTaGAGACTAGCTCCGTGGTACCTCCCCAAGTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: QINRVLPTGPVL*RLAPWYLPKLE Trigger: TTCTAACTTGGGGAGGTACCACGGAGCTAGTCTTCACAAGACTGGGCCAGTAGGCAAAACCCTGTTGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 72 bp | ACAGAAGGAAAAGGGCCTAAATCTGGGATTTCCTGGTaGGGGCAAGCAGGCAAACTACAAATGACTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: TEGKGPKSGISW*GQAGKLQMTGW Trigger: CCAGCCAGTCATTTGTAGTTTGCCTGCTTGCCCTCACCAGGAAATCCCAGATTTAGGCCCTTTTCCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 72 bp | CTAGAAAAGACCAGAGATGAGCTAACTGCCATGTGGTaGGACACTTCACTGGAGAGGAAGCATCTTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: LEKTRDELTAMW*DTSLERKHLGG Trigger: GCCACCAAGATGCTTCCTCTCCAGTGAAGTGTCTCACCACATGGCAGTTAGCTCATCTCTGGTCTTTTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CCA 72 bp | ATCTGTAAGCCTACAGATCAACAGGGTTTTGCCTACTaGCCCAGTCTTGTGAAGACTAGCTCCGTGGTACCT | + |
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Preference number: 3 (lower is better) Translates to: ICKPTDQQGFAY*PSLVKTSSVVP Trigger: AGGTACCACGGAGCTAGTCTTCACAAGACTGGGCCAGTAGGCAAAACCCTGTTGATCTGTAGGCTTACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 72 bp | AGGGAGGAAGCTGGTAGTGCAGATCTCTATATGTTTTaGTGGGGCTGCACATCATCTTGTCAGGTCCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: REEAGSADLYMF*WGCTSSCQVLS Trigger: TGACAGGACCTGACAAGATGATGTGCAGCCCCATCAAAACATATAGAGATCTGCACTACCAGCTTCCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 72 bp | CAGCCAAGCTGGTGCCTGAGGTATACAAACTCATACTaGAGGCCTAGGCAGGTGACCCGAAAATGTTACTTT | + |
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Preference number: 3 (lower is better) Translates to: QPSWCLRYTNSY*RPRQVTRKCYF Trigger: AAAGTAACATTTTCGGGTCACCTGCCTAGGCCTTCAGTATGAGTTTGTATACCTCAGGCACCAGCTTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CCA 72 bp | GAGAGAGAGAGAGGCGGGTACAATAACAGCAAGCCCTaGGCACATGAAAGTCAAATTAGGCAAAGTGGATCT | + |
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Preference number: 3 (lower is better) Translates to: ERERGGYNNSKP*AHESQIRQSGS Trigger: AGATCCACTTTGCCTAATTTGACTTTCATGTGCCCAGGGCTTGCTGTTATTGTACCCGCCTCTCTCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 72 bp | TGTTATTGCAAGAGCCTCCTTCAGCCATTACTATTTTaGGAGTCAAATGGGCAGGAGAACCAGAGAACTGCT | + |
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Preference number: 3 (lower is better) Translates to: CYCKSLLQPLLF*ESNGQENQRTA Trigger: AGCAGTTCTCTGGTTCTCCTGCCCATTTGACTCTCAAAATAGTAATGGCTGAAGGAGGCTCTTGCAATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGACTAGGAAAACCAAGTaGACACAATACTACAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: RRTRELLTGKRSMSMPEKTRKTK*TQYYKG Trigger: GCCTTTGTAGTATTGTGTCAACTTGGTTTTCCTAGT...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGGGGCAATTTGCTCTCTaGAATTATGTCTTAAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: RRTRELLTGKRSMSMPEKGQFAL*NYVLKA Trigger: AGCTTTTAAGACATAATTCAAGAGAGCAAATTGCCC...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGAAGGAAGAAAAGACCTaGCTGAATAGAACAGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: RRTRELLTGKRSMSMPEKKEEKT*LNRTEL Trigger: TAACTCTGTTCTATTCAGCAAGGTCTTTTCTTCCTT...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR TCA 72 bp | TCTTGTCACTGTGATGTTTATTCGCTCTATGTAAGGTaGTGTTTTAATCCAGCGGATCAATTTAACTGTACC | + |
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Preference number: 3 (lower is better) Translates to: SCHCDVYSLYVR*CFNPADQFNCT Trigger: GGTACAGTTAAATTGATCCGCTGGATTAAAACATCACCTTACATAGAGCGAATAAACATCACAGTGACAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR GCA 72 bp | CCATTCTATCCCATATGGACACATATGTGGGCAATTTaGTCTCTTGAATTATGTCTTAAAAGCTGGACAAAA | + |
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Preference number: 3 (lower is better) Translates to: PFYPIWTHMWAI*SLELCLKSWTK Trigger: TTTTGTCCAGCTTTTAAGACATAATTCAAGAGAGCAAATTGCCCACATATGTGTCCATATGGGATAGAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CCA 72 bp | CTCCTTATTCCATTCTATCCCATATGGACACATATGTaGGCAATTTGCTCTCTTGAATTATGTCTTAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LLIPFYPIWTHM*AICSLELCLKS Trigger: GCTTTTAAGACATAATTCAAGAGAGCAAATTGCCCACATATGTGTCCATATGGGATAGAATGGAATAAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CCA 72 bp | TGCTTCTTTTTCCTCCTTATTCCATTCTATCCCATATaGACACATATGTGGGCAATTTGCTCTCTTGAATTA | + |
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Preference number: 3 (lower is better) Translates to: CFFFLLIPFYPI*THMWAICSLEL Trigger: TAATTCAAGAGAGCAAATTGCCCACATATGTGTCCATATGGGATAGAATGGAATAAGGAGGAAAAAGAAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR CCA 90 bp | CCTGTCATTGAAAAGATGGCTCTCAGAGAGGGAGGGAGGGGAGGAGAGAGAGAGGGCCGCAGGGCTCCGTaGACGAGAGCCGCAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: PVIEKMALREGGRGGEREGRRAP*TRAAGH Trigger: ATGTCCTGCGGCTCTCGTCCACGGAGCCCTGCGGCC...CTCTCTCTCTCCTCCCCTCCCTCCCTCTCTGAGAGCCATCTTTTCAATGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR GCA 90 bp | CCTGTCATTGAAAAGATGGCTCTCAGAGAGGGAGGGAGGGGAGGAGAGAGAGAGCCAACAACTCTGAAATaGTGGCCGGGTTCTTACTGC | + |
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Preference number: 4 (lower is better) Translates to: PVIEKMALREGGRGGEREPTTLK*WPGSYC Trigger: GCAGTAAGAACCCGGCCAGCATTTCAGAGTTGTTGG...CTCTCTCTCTCCTCCCCTCCCTCCCTCTCTGAGAGCCATCTTTTCAATGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR TCA 90 bp | TTGCTATGGGTGAGACACACAGAAGGAAAAGGGCCTAAATCTGGGATTTCCTGGAGCCGCAGGACATCTTaGGCAATTCTCTGGGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LLWVRHTEGKGPKSGISWSRRTS*AILWVS Trigger: ACTGACCCAGAGAATTGCTCAAGATGTCCTGCGGCT...CCAGGAAATCCCAGATTTAGGCCCTTTTCCTTCTGTGTGTCTCACCCATAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR GCA 90 bp | TTGCTATGGGTGAGACACACAGAAGGAAAAGGGCCTAAATCTGGGATTTCCTGGTGGCCGGGTTCTTACTaGTCAAACTGCCCGTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: LLWVRHTEGKGPKSGISWWPGSY*SNCPLQ Trigger: TTGCAACGGGCAGTTTGAGCAGTAAGAACCCGGCCA...CCAGGAAATCCCAGATTTAGGCCCTTTTCCTTCTGTGTGTCTCACCCATAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR CCA 90 bp | CCTGTCATTGAAAAGATGGCTCTCAGAGAGGGAGGGAGGGGAGGAGAGAGAGAGTGGTTTGCTTTGATCTaGACAGACAGTTCTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: PVIEKMALREGGRGGEREWFALI*TDSSPT Trigger: TGTTGGAGAACTGTCTGTCCAGATCAAAGCAAACCA...CTCTCTCTCTCCTCCCCTCCCTCCCTCTCTGAGAGCCATCTTTTCAATGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR TCA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGACCGTCCAACAACTCTaGAATGCTGGCCGGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RRTRELLTGKRSMSMPEKTVQQL*NAGRVL Trigger: AAGAACCCGGCCAGCATTTCAGAGTTGTTGGACGGT...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR TCA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGCACAAGTCGAAATCCTaGGCTGAGAATCAGAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: RRTRELLTGKRSMSMPEKHKSKS*AENQSS Trigger: CGAACTCTGATTCTCAGCTCAGGATTTCGACTTGTG...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR GCA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACATCTCCAAGTTCACGTaGATAACACAACCCCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SVVATTSQSQVRLCQYKHISKFT*ITQPRR Trigger: CCTTCGGGGTTGTGTTATGCACGTGAACTTGGAGAT...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR CCA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGACAACTCTGAAATGCTaGCCGGGTTCTTACTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RRTRELLTGKRSMSMPEKTTLKC*PGSYCS Trigger: TGAGCAGTAAGAACCCGGCCAGCATTTCAGAGTTGT...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR TCA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACAAGTTTGGTTTGCTTTaGTCTGGACAGACAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SVVATTSQSQVRLCQYKHKFGLL*SGQTVL Trigger: GAGAACTGTCTGTCCAGATCAAAGCAAACCAAACTT...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR GCA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACCAACCAAGTTTGGTTTaGTTTGATCTGGACAGACAG | + |
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Preference number: 4 (lower is better) Translates to: SVVATTSQSQVRLCQYKHQPSLV*FDLDRQ Trigger: CTGTCTGTCCAGATCAAAGCAAACCAAACTTGGTTG...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CAA 72 bp | TTGTTATTGCAAGAGCCTCCTTCAGCCATTACTATTTaGAGAGTCAAATGGGCAGGAGAACCAGAGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: LLLQEPPSAITI*RVKWAGEPENC Trigger: GCAGTTCTCTGGTTCTCCTGCCCATTTGACTCTCAAAATAGTAATGGCTGAAGGAGGCTCTTGCAATAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CAA 72 bp | TGTTTTAATCCAGCGGATCAATTTAACTGTACCCTCTaGTGTAAAAGCTCTTCAAATTCAGGGAGGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: CFNPADQFNCTL*CKSSSNSGRKL Trigger: CAGCTTCCTCCCTGAATTTGAAGAGCTTTTACACAAGAGGGTACAGTTAAATTGATCCGCTGGATTAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CAA 72 bp | CTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACATaGGTAACTAAAAAGAAGTGTGATGTTAAGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LRVKSGSANIST*VTKKKCDVKER Trigger: CCTTTCCTTAACATCACACTTCTTTTTAGTTACCAATGTGCTTATATTGGCAGAGCCTGACTTGACTCTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| 3UTR CAA 72 bp | ATGAAAGTCAAATTAGGCAAAGTGGATCTTGCTCTGTaGCTAAGACTACCTGCTAAATATGAGACCAAATAT | + |
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Preference number: 4 (lower is better) Translates to: MKVKLGKVDLAL*LRLPAKYETKY Trigger: ATATTTGGTCTCATATTTAGCAGGTAGTCTTAGCAACAGAGCAAGATCCACTTTGCCTAATTTGACTTTCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS TCA 90 bp | CCCCGAAGGCCGCAGGGCTCCGTGGACGAGAGCCGCAGGACATCTTaGGCAATTCTCTGGGTCAGTTTCTCAGGGACCAAGACCTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: PRRPQGSVDESRRTS*AILWVSFSGTKTLE Trigger: CTCTAAGGTCTTGGTCCCTGAGAAACTGACCCAGAGAATTGCTCAAGATGTCCTGCGGCTCTCGTCCACGGAGCCCTGCGGCCTTCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS GCA 90 bp | CTGCTAAAGAAGAAGTCCTTGAGGCTGGTCCACGGGCAGCTCTCCTaGTTAAACACAAGCGTGAGCTCAAAGGTCGGCACCACGCTAGCA | + |
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Preference number: 5 (lower is better) Translates to: LLKKKSLRLVHGQLS*LNTSVSSKVGTTLA Trigger: TGCTAGCGTGGTGCCGACCTTTGAGCTCACGCTTGTGTTTAAGCAGGAGAGCTGCCCGTGGACCAGCCTCAAGGACTTCTTCTTTAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR CAA 90 bp | CCTGTCATTGAAAAGATGGCTCTCAGAGAGGGAGGGAGGGGAGGAGAGAGAGAGCTAAAGAAGAAGTCCTaGAGGCTGGTCCACGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PVIEKMALREGGRGGERELKKKS*RLVHGQ Trigger: CTGCCCGTGGACCAGCCTCAAGGACTTCTTCTTTAG...CTCTCTCTCTCCTCCCCTCCCTCCCTCTCTGAGAGCCATCTTTTCAATGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR CAA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGGAGCCGCAGGACATCTaGAGCAATTCTCTGGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: RRTRELLTGKRSMSMPEKEPQDI*SNSLGQ Trigger: CTGACCCAGAGAATTGCTCAAGATGTCCTGCGGCTC...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR CAA 90 bp | TCTGTGGTAGCAACAACATCTCAGAGTCAAGTCAGGCTCTGCCAATATAAGCACCCAAATTCTGGCATGTaGTCTCTTCAAATACCACCT | + |
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Preference number: 5 (lower is better) Translates to: SVVATTSQSQVRLCQYKHPNSGM*SLQIPP Trigger: AGGTGGTATTTGAAGAGACAACATGCCAGAATTTGG...GTGCTTATATTGGCAGAGCCTGACTTGACTCTGAGATGTTGTTGCTACCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS-3UTR CAA 90 bp | AGGAGAACCAGAGAACTGCTAACGGGTAAAAGATCTATGTCCATGCCTGAGAAGCAAGTTTGGTTTGCTTaGATCTGGACAGACAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RRTRELLTGKRSMSMPEKQVWFA*IWTDSS Trigger: AGAACTGTCTGTCCAGATCAAAGCAAACCAAACTTG...CTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTCTCTGGTTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS CCA 90 bp | TGCTTTGATCTGGACAGACAGTTCTCCAACATTTTAACCAAATTCTaGCATGTTGTCTCTTCAAATACCACCTCGTTGAGGTTGGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: CFDLDRQFSNILTKF*HVVSSNTTSLRLGS Trigger: TGAGCCCAACCTCAACGAGGTGGTATTTGAAGAGACAACATGCCAGAATTTGGTTAAAATGTTGGAGAACTGTCTGTCCAGATCAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS TCA 90 bp | TTTCTCAGGGACCAAGACCTTAGAGCAACCAAGTTTGGTTTGCTTTaGTCTGGACAGACAGTTCTCCAACATTTTAACCAAATTCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: FLRDQDLRATKFGLL*SGQTVLQHFNQILA Trigger: TGCCAGAATTTGGTTAAAATGTTGGAGAACTGTCTGTCCAGATCAAAGCAAACCAAACTTGGTTGCTCTAAGGTCTTGGTCCCTGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS GCA 90 bp | GTCAGTTTCTCAGGGACCAAGACCTTAGAGCAACCAAGTTTGGTTTaGTTTGATCTGGACAGACAGTTCTCCAACATTTTAACCAAATTC | + |
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Preference number: 5 (lower is better) Translates to: VSFSGTKTLEQPSLV*FDLDRQFSNILTKF Trigger: GAATTTGGTTAAAATGTTGGAGAACTGTCTGTCCAGATCAAAGCAAACCAAACTTGGTTGCTCTAAGGTCTTGGTCCCTGAGAAACTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS TCA 72 bp | CCGCAGGGCTCCGTGGACGAGAGCCGCAGGACATCTTaGGCAATTCTCTGGGTCAGTTTCTCAGGGACCAAG | + |
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Preference number: 6 (lower is better) Translates to: PQGSVDESRRTS*AILWVSFSGTK Trigger: CTTGGTCCCTGAGAAACTGACCCAGAGAATTGCTCAAGATGTCCTGCGGCTCTCGTCCACGGAGCCCTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS CAA 90 bp | ACCCCGAAGGCCGCAGGGCTCCGTGGACGAGAGCCGCAGGACATCTaGAGCAATTCTCTGGGTCAGTTTCTCAGGGACCAAGACCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: TPKAAGLRGREPQDI*SNSLGQFLRDQDLR Trigger: TCTAAGGTCTTGGTCCCTGAGAAACTGACCCAGAGAATTGCTCAAGATGTCCTGCGGCTCTCGTCCACGGAGCCCTGCGGCCTTCGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS GCA 72 bp | AAGAAGTCCTTGAGGCTGGTCCACGGGCAGCTCTCCTaGTTAAACACAAGCGTGAGCTCAAAGGTCGGCACC | + |
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Preference number: 6 (lower is better) Translates to: KKSLRLVHGQLS*LNTSVSSKVGT Trigger: GGTGCCGACCTTTGAGCTCACGCTTGTGTTTAAGCAGGAGAGCTGCCCGTGGACCAGCCTCAAGGACTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053855.8 |
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| CDS TCA 72 bp | CAGACTCCCAGGGTGATAGCCACCGTCCAACAACTCTaGAATGCTGGCCGGGTTCTTACTGCTCAAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: QTPRVIATVQQL*NAGRVLTAQTA Trigger: GGCAGTTTGAGCAGTAAGAACCCGGCCAGCATTTCAGAGTTGTTGGACGGTGGCTATCACCCTGGGAGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS GCA 72 bp | TCCCAGGGTGATAGCCACCGTCCAACAACTCTGAAATaGTGGCCGGGTTCTTACTGCTCAAACTGCCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: SQGDSHRPTTLK*WPGSYCSNCPL Trigger: CAACGGGCAGTTTGAGCAGTAAGAACCCGGCCAGCATTTCAGAGTTGTTGGACGGTGGCTATCACCCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS CCA 72 bp | CAGGGTGATAGCCACCGTCCAACAACTCTGAAATGCTaGCCGGGTTCTTACTGCTCAAACTGCCCGTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: QGDSHRPTTLKC*PGSYCSNCPLQ Trigger: TTGCAACGGGCAGTTTGAGCAGTAAGAACCCGGCCAGCATTTCAGAGTTGTTGGACGGTGGCTATCACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS CAA 90 bp | CTCTGGGTCAGTTTCTCAGGGACCAAGACCTTAGAGCAACCAAGTTaGGTTTGCTTTGATCTGGACAGACAGTTCTCCAACATTTTAACC | + |
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Preference number: 6 (lower is better) Translates to: LWVSFSGTKTLEQPS*VCFDLDRQFSNILT Trigger: GGTTAAAATGTTGGAGAACTGTCTGTCCAGATCAAAGCAAACCAAACTTGGTTGCTCTAAGGTCTTGGTCCCTGAGAAACTGACCCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS TCA 72 bp | AATTCTGGCATGTTGTCTCTTCAAATACCACCTCGTTaGGGTTGGGCTCAGGGACAACATAATCCCAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: NSGMLSLQIPPR*GWAQGQHNPSS Trigger: ACTACTGGGATTATGTTGTCCCTGAGCCCAACCTCAACGAGGTGGTATTTGAAGAGACAACATGCCAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS CAA 72 bp | AGTTTCTCAGGGACCAAGACCTTAGAGCAACCAAGTTaGGTTTGCTTTGATCTGGACAGACAGTTCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: SFSGTKTLEQPS*VCFDLDRQFSN Trigger: GTTGGAGAACTGTCTGTCCAGATCAAAGCAAACCAAACTTGGTTGCTCTAAGGTCTTGGTCCCTGAGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS GCA 72 bp | TCAGGGACCAAGACCTTAGAGCAACCAAGTTTGGTTTaGTTTGATCTGGACAGACAGTTCTCCAACATTTTA | + |
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Preference number: 6 (lower is better) Translates to: SGTKTLEQPSLV*FDLDRQFSNIL Trigger: TAAAATGTTGGAGAACTGTCTGTCCAGATCAAAGCAAACCAAACTTGGTTGCTCTAAGGTCTTGGTCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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| CDS CCA 72 bp | CTGGACAGACAGTTCTCCAACATTTTAACCAAATTCTaGCATGTTGTCTCTTCAAATACCACCTCGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LDRQFSNILTKF*HVVSSNTTSLR Trigger: CCTCAACGAGGTGGTATTTGAAGAGACAACATGCCAGAATTTGGTTAAAATGTTGGAGAACTGTCTGTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053855.8 ENSMUST00000165845.2 |
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