Pregenerated sensors for DDIT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020108Ensembl transcript IDs: ENSMUST00000020308.5
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGACTCCTAAGCCTTTGTTTCATGCTACAGTACTGAGGGGCGTGTaGCCCAACAGGGAGCCACCTGCATACAACCTAGAGACTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: VTPKPLFHATVLRGV*PNREPPAYNLETSW Trigger: CCAGGAAGTCTCTAGGTTGTATGCAGGTGGCTCCCTGTTGGGGCACACGCCCCTCAGTACTGTAGCATGAAACAAAGGCTTAGGAGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR-3UTR GCA 90 bp | CCAACCCCCAGCCGGGGCAGAGGCCAGTGCAGACCAGCTGCCCTTCTGGCTCTGCCTTCAGTCCTTGCCTaGGGGTCTCCACCACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PTPSRGRGQCRPAALLALPSVLA*GSPPQK Trigger: TTTCTGTGGTGGAGACCCGCAGGCAAGGACTGAAGG...CAGAGCCAGAAGGGCAGCTGGTCTGCACTGGCCTCTGCCCCGGCTGGGGGTTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR-3UTR CCA 90 bp | CCAACCCCCAGCCGGGGCAGAGGCCAGTGCAGACCAGCTGCCCTTCTGGCTCTGAACCTAGAGACTTCCTaGAGAACACTTCCTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: PTPSRGRGQCRPAALLALNLETS*RTLPSP Trigger: GGGGGAAGGAAGTGTTCTCCAGGAAGTCTCTAGGTT...CAGAGCCAGAAGGGCAGCTGGTCTGCACTGGCCTCTGCCCCGGCTGGGGGTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGACCAGCTGCCCTTCTGGCTCTGGCCCACAACTGCTGTTGTAACTTGTCAGTTCATGCTACAGTACTaGGGGGCGTGTGCCCCAACA | + |
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Preference number: 2 (lower is better) Translates to: ADQLPFWLWPTTAVVTCQFMLQY*GACAPT Trigger: TGTTGGGGCACACGCCCCTCAGTACTGTAGCATGAA...CTGACAAGTTACAACAGCAGTTGTGGGCCAGAGCCAGAAGGGCAGCTGGTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCATGCAGTCTGTAAGATAGCTGCCTCGAACAGGTCAGTAGTGAAGCGCCGACGGGGCAGAGGCCAGTaGAGACCAGCTGCCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: IHAVCKIAASNRSVVKRRRGRGQ*RPAALL Trigger: CAGAAGGGCAGCTGGTCTGCACTGGCCTCTGCCCCG...TCGGCGCTTCACTACTGACCTGTTCGAGGCAGCTATCTTACAGACTGCATGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR CAA 90 bp | TACATGGGCACCGGGATGGGCTGGCTGCAGCTCCCAGGTGTAATTTaGTTTCAAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: YMGTGMGWLQLPGVI*FQVSKIPNDPNTHP Trigger: GGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTTGAAACAAAATTACACCTGGGAGCTGCAGCCAGCCCATCCCGGTGCCCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR CAA 90 bp | TGCTACATACACATCCAGCCAGAAGCCTGTGTGACTCCTAAGCCTTaGTTTCATGCTACAGTACTGAGGGGCGTGTGCCCCAACAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: CYIHIQPEACVTPKP*FHATVLRGVCPNRE Trigger: CTCCCTGTTGGGGCACACGCCCCTCAGTACTGTAGCATGAAACAAAGGCTTAGGAGTCACACAGGCTTCTGGCTGGATGTGTATGTAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR-3UTR TCA 90 bp | AGACCAGCTGCCCTTCTGGCTCTGGCCCACAACTGCTGTTGTAACTTGTCAGTAAGCCAGAAGCCTGTGTaGCTCCTAAGCCTTTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: RPAALLALAHNCCCNLSVSQKPV*LLSLCF Trigger: GAAACAAAGGCTTAGGAGTCACACAGGCTTCTGGCT...TACTGACAAGTTACAACAGCAGTTGTGGGCCAGAGCCAGAAGGGCAGCTGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR CAA 90 bp | GTGGCTATCGTCAGTTTTCTAACACAGGGGACAGTCCTTCAGTCCTaGCCTGCGGGTCTCCACCACAGAAATTCCTTGTCTTCACTTTGG | + |
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Preference number: 2 (lower is better) Translates to: VAIVSFLTQGTVLQS*PAGLHHRNSLSSLW Trigger: CCAAAGTGAAGACAAGGAATTTCTGTGGTGGAGACCCGCAGGCAAGGACTGAAGGACTGTCCCCTGTGTTAGAAAACTGACGATAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCAAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTCCTTGTCTTCACTTTaGGGGGCAGTGAGAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: CFKCRRSRMILTPTPFLLSLSSL*GAVRNP Trigger: AGGGTTTCTCACTGCCCCCCAAAGTGAAGACAAGGA...GAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTTGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR CCA 72 bp | CCAGCCCCTCTCCTCACAGTTGAATCCTCCAGTACATaGGCACCGGGATGGGCTGGCTGCAGCTCCCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: PAPLLTVESSST*APGWAGCSSQV Trigger: CACCTGGGAGCTGCAGCCAGCCCATCCCGGTGCCCATGTACTGGAGGATTCAACTGTGAGGAGAGGGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR CCA 72 bp | AACAGGGAGCCACCTGCATACAACCTAGAGACTTCCTaGAGAACACTTCCTTCCCCCACCTGGCCCTGCGCC | + |
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Preference number: 3 (lower is better) Translates to: NREPPAYNLETS*RTLPSPTWPCA Trigger: GGCGCAGGGCCAGGTGGGGGAAGGAAGTGTTCTCCAGGAAGTCTCTAGGTTGTATGCAGGTGGCTCCCTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR-3UTR CAA 90 bp | CCCCAGCCCCTCTCCTCACAGTTGAATCCTCCAGTACATGGGCACCGGGATGGGCTCCCAGGTGTAATTTaGTTTCAAGTGTCGAAGATC | + |
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Preference number: 3 (lower is better) Translates to: PQPLSSQLNPPVHGHRDGLPGVI*FQVSKI Trigger: GATCTTCGACACTTGAAACAAAATTACACCTGGGAG...CCCATCCCGGTGCCCATGTACTGGAGGATTCAACTGTGAGGAGAGGGGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR GCA 72 bp | AAGCCTTTGTTTCATGCTACAGTACTGAGGGGCGTGTaGCCCAACAGGGAGCCACCTGCATACAACCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: KPLFHATVLRGV*PNREPPAYNLE Trigger: CTCTAGGTTGTATGCAGGTGGCTCCCTGTTGGGGCACACGCCCCTCAGTACTGTAGCATGAAACAAAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR-3UTR CAA 90 bp | TCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTTACATTCATGACAGTCCTTCAGTCCTaGCCTGCGGGTCTCCACCAC | + |
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Preference number: 3 (lower is better) Translates to: SKIPNDPNTHPIPTLTFMTVLQS*PAGLHH Trigger: GTGGTGGAGACCCGCAGGCAAGGACTGAAGGACTGT...CATGAATGTAAGAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR GCA 90 bp | CCAACCCCCAGCCGGGGCAGAGGCCAGTGCAGACCAGCTGCCCTTCTGGCTCTGGCCCTCTTCTCTGGCTaGAGACCCCCAGGCGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: PTPSRGRGQCRPAALLALALFSG*RPPGGA Trigger: CGCTCCGCCTGGGGGTCTGCAGCCAGAGAAGAGGGC...CAGAGCCAGAAGGGCAGCTGGTCTGCACTGGCCTCTGCCCCGGCTGGGGGTTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCCGGGGCAGAGGCCAGTGCAGACCAGCTGCCCTTCTGGCTCTGGCCCAGTTCCTTGCCCACCTaGCTCACCAGCTGGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: PPAGAEASADQLPFWLWPSSLPT*LTSWLG Trigger: GCCGAGCCAGCTGGTGAGCCAGGTGGGCAAGGAACT...GGGCCAGAGCCAGAAGGGCAGCTGGTCTGCACTGGCCTCTGCCCCGGCTGGGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCCCTCTCCTCACAGTTGAATCCTCCAGTACATGGGCACCGGGATGGGACACACGTCCAGCAGTaGCCCCCGCAGGCCGCACGG | + |
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Preference number: 4 (lower is better) Translates to: PQPLSSQLNPPVHGHRDGTHVQQ*PPQAAR Trigger: CCGTGCGGCCTGCGGGGGGCACTGCTGGACGTGTGT...CCCATCCCGGTGCCCATGTACTGGAGGATTCAACTGTGAGGAGAGGGGCTGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CCA 90 bp | GGGGCAGAGGCCAGTGCAGACCAGCTGCCCTTCTGGCTCTGGCCCACAACTGCTGAGCCCAATCGCGCCTaGGACAGGCTCTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAEASADQLPFWLWPTTAEPNRA*DRLSCS Trigger: GCTGCAGGAGAGCCTGTCCCAGGCGCGATTGGGCTC...AGCAGTTGTGGGCCAGAGCCAGAAGGGCAGCTGGTCTGCACTGGCCTCTGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR TCA 90 bp | CACAGGGGACAGTCCTTCAGTCCTTGCCTGCGGGTCTCCACCACAGAAATTCCTCCAGCTGGCTCGGCATaGGCAAACGCGCAGGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: HRGQSFSPCLRVSTTEIPPAGSA*ANAQGA Trigger: GGCGCCCTGCGCGTTTGCTCATGCCGAGCCAGCTGG...AGGAATTTCTGTGGTGGAGACCCGCAGGCAAGGACTGAAGGACTGTCCCCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCCCTCTCCTCACAGTTGAATCCTCCAGTACATGGGCACCGGGATGGGGCCCGAAGCCACTGTTaGTGCTGTCCAGGGACTCGC | + |
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Preference number: 4 (lower is better) Translates to: PQPLSSQLNPPVHGHRDGARSHC*CCPGTR Trigger: GCGAGTCCCTGGACAGCAGCAACAGTGGCTTCGGGC...CCCATCCCGGTGCCCATGTACTGGAGGATTCAACTGTGAGGAGAGGGGCTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CCA 90 bp | CAAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTTACAAGGTGGGCACCAGGCTaGGGTCGAGGGCCAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QVSKIPNDPNTHPIPTLTRWAPG*GRGPAE Trigger: CTCAGCTGGCCCTCGACCCCAGCCTGGTGCCCACCT...TGTAAGAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CCA 90 bp | CAAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTTACACAAGGCCCTCTTCTCTaGCTGCAGACCCCCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: QVSKIPNDPNTHPIPTLTQGPLL*LQTPRR Trigger: CCGCCTGGGGGTCTGCAGCCAGAGAAGAGGGCCTTG...TGTAAGAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CCA 90 bp | GGGATGGGCTGGCTGCAGCTCCCAGGTGTAATTTTGTTTCAAGTGTCGAAGATCACAGCCCCTGGATCTTaGGCCAGAGGCGAGAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GMGWLQLPGVILFQVSKITAPGS*ARGESP Trigger: TGGACTCTCGCCTCTGGCCCAAGATCCAGGGGCTGT...GATCTTCGACACTTGAAACAAAATTACACCTGGGAGCTGCAGCCAGCCCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR TCA 90 bp | CAAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTTACACACCCCATCCAGGTATaGGGAGTCTTCCTCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: QVSKIPNDPNTHPIPTLTHPIQV*GVFLRP Trigger: GGGCCGGAGGAAGACTCCTCATACCTGGATGGGGTG...TGTAAGAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR TCA 90 bp | CAAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTTACAAGCACCAGGGTCAACTaGAAGGTGGGCACCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QVSKIPNDPNTHPIPTLTSTRVN*KVGTRL Trigger: CAGCCTGGTGCCCACCTTTCAGTTGACCCTGGTGCT...TGTAAGAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR GCA 90 bp | ATTCATGCAGTCTGTAAGATAGCTGCCTCGAACAGGTCAGTAGTGAAGCGCCGAAGGTTGGCACACAGGTaGTCATCCTCGGGGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: IHAVCKIAASNRSVVKRRRLAHR*SSSGSL Trigger: CAGTGACCCCGAGGATGAGCACCTGTGTGCCAACCT...TCGGCGCTTCACTACTGACCTGTTCGAGGCAGCTATCTTACAGACTGCATGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR GCA 90 bp | TTTCAAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTTGGCGCAGGAGTTCCTTaGCCACCTGGCTCACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FQVSKIPNDPNTHPIPTLGAGVP*PPGSPA Trigger: AGCTGGTGAGCCAGGTGGGCAAGGAACTCCTGCGCC...AAGAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR GCA 90 bp | TGTTTCAAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTGGCAGCTCTTGCCTTaGTCCACACACACGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CFKCRRSRMILTPTPFLLWQLLP*STHTSS Trigger: GCTGGACGTGTGTGTGGAGCAAGGCAAGAGCTGCCA...GAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTTGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR GCA 90 bp | AAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTTACATCGAAGCCACTGTTGCTaGTGTCCAGGGACTCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KCRRSRMILTPTPFLLLHRSHCC*CPGTRS Trigger: ACTGCGAGTCCCTGGACAGCAGCAACAGTGGCTTCG...ATGTAAGAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| 3UTR CAA 72 bp | GTCAGTTTTCTAACACAGGGGACAGTCCTTCAGTCCTaGCCTGCGGGTCTCCACCACAGAAATTCCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: VSFLTQGTVLQS*PAGLHHRNSLS Trigger: AGACAAGGAATTTCTGTGGTGGAGACCCGCAGGCAAGGACTGAAGGACTGTCCCCTGTGTTAGAAAACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS GCA 90 bp | CGAGCTCTCCAGGCTCGCGCAGCGGTCAAGGCCCTCTTCTCTGGCTaGAGACCCCCAGGCGGAGCGCGGCGGCCGATCAGCGGCCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: RALQARAAVKALFSG*RPPGGARRPISGRS Trigger: ACTCCGGCCGCTGATCGGCCGCCGCGCTCCGCCTGGGGGTCTGCAGCCAGAGAAGAGGGCCTTGACCGCTGCGCGAGCCTGGAGAGCTCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CCA 90 bp | AGTCCGAGCTCTCCAGGCTCGCGCAGCGGTCAAGGCCCTCTTCTCTaGCTGCAGACCCCCAGGCGGAGCGCGGCGGCCGATCAGCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: SPSSPGSRSGQGPLL*LQTPRRSAAADQRP Trigger: CGGCCGCTGATCGGCCGCCGCGCTCCGCCTGGGGGTCTGCAGCCAGAGAAGAGGGCCTTGACCGCTGCGCGAGCCTGGAGAGCTCGGACT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS TCA 90 bp | GGCGCAGGAGTTCCTTGCCCACCTGGCTCACCAGCTGGCTCGGCATaGGCAAACGCGCAGGGCGCCGCGAGCCCAATCGCGCCTGGGACA | + |
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Preference number: 5 (lower is better) Translates to: GAGVPCPPGSPAGSA*ANAQGAASPIAPGT Trigger: TGTCCCAGGCGCGATTGGGCTCGCGGCGCCCTGCGCGTTTGCTCATGCCGAGCCAGCTGGTGAGCCAGGTGGGCAAGGAACTCCTGCGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CCA 90 bp | CCGCACGGCTCACTGTATGCCAGGCGCAGGAGTTCCTTGCCCACCTaGCTCACCAGCTGGCTCGGCATGAGCAAACGCGCAGGGCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: PHGSLYARRRSSLPT*LTSWLGMSKRAGRR Trigger: GCGGCGCCCTGCGCGTTTGCTCATGCCGAGCCAGCTGGTGAGCCAGGTGGGCAAGGAACTCCTGCGCCTGGCATACAGTGAGCCGTGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS GCA 90 bp | CGCCGCGAGCCCAATCGCGCCTGGGACAGGCTCTCCTGCAGCAGCTaGATCAGGTTGGCACACAGGTGCTCATCCTCGGGGTCACTGAGC | + |
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Preference number: 5 (lower is better) Translates to: RREPNRAWDRLSCSS*IRLAHRCSSSGSLS Trigger: GCTCAGTGACCCCGAGGATGAGCACCTGTGTGCCAACCTGATGCAGCTGCTGCAGGAGAGCCTGTCCCAGGCGCGATTGGGCTCGCGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS GCA 90 bp | CACGCTATGGCAGCTCTTGCCTTGCTCCACACACACGTCCAGCAGTaGCCCCCGCAGGCCGCACGGCTCACTGTATGCCAGGCGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: HAMAALALLHTHVQQ*PPQAARLTVCQAQE Trigger: CTCCTGCGCCTGGCATACAGTGAGCCGTGCGGCCTGCGGGGGGCACTGCTGGACGTGTGTGTGGAGCAAGGCAAGAGCTGCCATAGCGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CCA 90 bp | AGTCCAGACGCAGCACCAGGGTCAACTGAAAGGTGGGCACCAGGCTaGGGTCGAGGGCCAGCTGAGCCACGCTATGGCAGCTCTTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SPDAAPGSTERWAPG*GRGPAEPRYGSSCL Trigger: AAGGCAAGAGCTGCCATAGCGTGGCTCAGCTGGCCCTCGACCCCAGCCTGGTGCCCACCTTTCAGTTGACCCTGGTGCTGCGTCTGGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS TCA 90 bp | GCAGCTGCATCAGGTTGGCACACAGGTGCTCATCCTCGGGGTCACTaGGCAGCTCAAAGTCGGGCAGGGACACCCCATCCAGGTATGAGG | + |
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Preference number: 5 (lower is better) Translates to: AAASGWHTGAHPRGH*AAQSRAGTPHPGMR Trigger: CCTCATACCTGGATGGGGTGTCCCTGCCCGACTTTGAGCTGCTCAGTGACCCCGAGGATGAGCACCTGTGTGCCAACCTGATGCAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CAA 90 bp | CACAGGGGACAGTCCTTCAGTCCTTGCCTGCGGGTCTCCACCACAGAAATTCCTGGCCCGAAGCCACTGTaGCTGCTGTCCAGGGACTCG | + |
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Preference number: 5 (lower is better) Translates to: HRGQSFSPCLRVSTTEIPGPKPL*LLSRDS Trigger: CGAGTCCCTGGACAGCAGCAACAGTGGCTTCGGGCC...AGGAATTTCTGTGGTGGAGACCCGCAGGCAAGGACTGAAGGACTGTCCCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CAA 90 bp | GCAGACCAGCTGCCCTTCTGGCTCTGGCCCACAACTGCTGTTGTAACTTGTCAGAGGCGCAGGAGTTCCTaGCCCACCTGGCTCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: ADQLPFWLWPTTAVVTCQRRRSS*PTWLTS Trigger: GCTGGTGAGCCAGGTGGGCAAGGAACTCCTGCGCCT...CTGACAAGTTACAACAGCAGTTGTGGGCCAGAGCCAGAAGGGCAGCTGGTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CAA 90 bp | CACAGGGGACAGTCCTTCAGTCCTTGCCTGCGGGTCTCCACCACAGAAATTCCTACGCTATGGCAGCTCTaGCCTTGCTCCACACACACG | + |
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Preference number: 5 (lower is better) Translates to: HRGQSFSPCLRVSTTEIPTLWQL*PCSTHT Trigger: CGTGTGTGTGGAGCAAGGCAAGAGCTGCCATAGCGT...AGGAATTTCTGTGGTGGAGACCCGCAGGCAAGGACTGAAGGACTGTCCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CCA 90 bp | TACTTAGCGTCAGGGACTGGCTGTAACCAGGGACCAAGGAAGAGTTaGCAGAACTTAACAGCCCCTGGATCTTGGGCCAGAGGCGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: YLASGTGCNQGPRKS*QNLTAPGSWARGES Trigger: ACTCTCGCCTCTGGCCCAAGATCCAGGGGCTGTTAAGTTCTGCCAACTCTTCCTTGGTCCCTGGTTACAGCCAGTCCCTGACGCTAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CAA 90 bp | CCCAACAGGGAGCCACCTGCATACAACCTAGAGACTTCCTGGAGAACACTTCCTGGGACCAAGGAAGAGTaGGCAGAACTTAACAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PNREPPAYNLETSWRTLPGTKEE*AELNSP Trigger: GGGGCTGTTAAGTTCTGCCAACTCTTCCTTGGTCCC...AGGAAGTGTTCTCCAGGAAGTCTCTAGGTTGTATGCAGGTGGCTCCCTGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS-3UTR CAA 90 bp | TTTCAAGTGTCGAAGATCCCGAATGATCCTAACACCCACCCCATTCCTACTCTTATGGCAGCTCTTGCCTaGCTCCACACACACGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: FQVSKIPNDPNTHPIPTLMAALA*LHTHVQ Trigger: CTGGACGTGTGTGTGGAGCAAGGCAAGAGCTGCCAT...AAGAGTAGGAATGGGGTGGGTGTTAGGATCATTCGGGATCTTCGACACTTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS GCA 72 bp | CAGGCTCGCGCAGCGGTCAAGGCCCTCTTCTCTGGCTaGAGACCCCCAGGCGGAGCGCGGCGGCCGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: QARAAVKALFSG*RPPGGARRPIS Trigger: GCTGATCGGCCGCCGCGCTCCGCCTGGGGGTCTGCAGCCAGAGAAGAGGGCCTTGACCGCTGCGCGAGCCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CCA 72 bp | TCTCCAGGCTCGCGCAGCGGTCAAGGCCCTCTTCTCTaGCTGCAGACCCCCAGGCGGAGCGCGGCGGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: SPGSRSGQGPLL*LQTPRRSAAAD Trigger: ATCGGCCGCCGCGCTCCGCCTGGGGGTCTGCAGCCAGAGAAGAGGGCCTTGACCGCTGCGCGAGCCTGGAGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS TCA 72 bp | GTTCCTTGCCCACCTGGCTCACCAGCTGGCTCGGCATaGGCAAACGCGCAGGGCGCCGCGAGCCCAATCGCG | + |
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Preference number: 6 (lower is better) Translates to: VPCPPGSPAGSA*ANAQGAASPIA Trigger: CGCGATTGGGCTCGCGGCGCCCTGCGCGTTTGCTCATGCCGAGCCAGCTGGTGAGCCAGGTGGGCAAGGAAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CAA 90 bp | CCCCGCAGGCCGCACGGCTCACTGTATGCCAGGCGCAGGAGTTCCTaGCCCACCTGGCTCACCAGCTGGCTCGGCATGAGCAAACGCGCA | + |
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Preference number: 6 (lower is better) Translates to: PRRPHGSLYARRRSS*PTWLTSWLGMSKRA Trigger: TGCGCGTTTGCTCATGCCGAGCCAGCTGGTGAGCCAGGTGGGCAAGGAACTCCTGCGCCTGGCATACAGTGAGCCGTGCGGCCTGCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS GCA 72 bp | GCAGCTCTTGCCTTGCTCCACACACACGTCCAGCAGTaGCCCCCGCAGGCCGCACGGCTCACTGTATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AALALLHTHVQQ*PPQAARLTVCQ Trigger: CTGGCATACAGTGAGCCGTGCGGCCTGCGGGGGGCACTGCTGGACGTGTGTGTGGAGCAAGGCAAGAGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CCA 72 bp | TCACTGTATGCCAGGCGCAGGAGTTCCTTGCCCACCTaGCTCACCAGCTGGCTCGGCATGAGCAAACGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SLYARRRSSLPT*LTSWLGMSKRA Trigger: TGCGCGTTTGCTCATGCCGAGCCAGCTGGTGAGCCAGGTGGGCAAGGAACTCCTGCGCCTGGCATACAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CAA 72 bp | AGGTATGAGGAGTCTTCCTCCGGCCCGAAGCCACTGTaGCTGCTGTCCAGGGACTCGCAGTCCGAGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RYEESSSGPKPL*LLSRDSQSELS Trigger: GGAGAGCTCGGACTGCGAGTCCCTGGACAGCAGCAACAGTGGCTTCGGGCCGGAGGAAGACTCCTCATACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS TCA 72 bp | TCAGGTTGGCACACAGGTGCTCATCCTCGGGGTCACTaGGCAGCTCAAAGTCGGGCAGGGACACCCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: SGWHTGAHPRGH*AAQSRAGTPHP Trigger: TGGATGGGGTGTCCCTGCCCGACTTTGAGCTGCTCAGTGACCCCGAGGATGAGCACCTGTGTGCCAACCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS GCA 72 bp | CTCTCCTGCAGCAGCTGCATCAGGTTGGCACACAGGTaGTCATCCTCGGGGTCACTGAGCAGCTCAAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: LSCSSCIRLAHR*SSSGSLSSSKS Trigger: CGACTTTGAGCTGCTCAGTGACCCCGAGGATGAGCACCTGTGTGCCAACCTGATGCAGCTGCTGCAGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CCA 72 bp | GGGACCAAGGAAGAGTTGGCAGAACTTAACAGCCCCTaGATCTTGGGCCAGAGGCGAGAGTCCAGACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GTKEELAELNSP*ILGQRRESRRS Trigger: GCTGCGTCTGGACTCTCGCCTCTGGCCCAAGATCCAGGGGCTGTTAAGTTCTGCCAACTCTTCCTTGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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| CDS CCA 72 bp | TCAGGGACTGGCTGTAACCAGGGACCAAGGAAGAGTTaGCAGAACTTAACAGCCCCTGGATCTTGGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGTGCNQGPRKS*QNLTAPGSWAR Trigger: TCTGGCCCAAGATCCAGGGGCTGTTAAGTTCTGCCAACTCTTCCTTGGTCCCTGGTTACAGCCAGTCCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020308.5 |
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