Pregenerated sensors for DDIT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025408Ensembl transcript IDs: ENSMUST00000026475.15, ENSMUST00000139091.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCCTGGTCTACCCTCAGTCCCCTCCTCAGCATGTGCAGTGCAGTaGAGGGTCACATGCTTGGCGCTGGCGCGATGGTGCTGGGTACAC | + |
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Preference number: 1 (lower is better) Translates to: SPGLPSVPSSACAVQ*RVTCLALARWCWVH Trigger: GTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGGAGGGGACTGAGGGTAGACCAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR GCA 90 bp | TCACTTTACTGGACATGGACAGTAATAAACAATGTACCGTCTATGTaGAAGCCGAGCCCTCTCCTGGTCTACCCTCAGTCCCCTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: SLYWTWTVINNVPSM*KPSPLLVYPQSPPQ Trigger: CTGAGGAGGGGACTGAGGGTAGACCAGGAGAGGGCTCGGCTTGCACATAGACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR-3UTR GCA 90 bp | TGGACATGGACAGTAATAAACAATGTACCGTCTATGTGCAAGCCGAGCCCTCTCCCTCAGCATGTGCAGTaGAGTGCAGGGTCACATGCT | + |
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Preference number: 2 (lower is better) Translates to: WTWTVINNVPSMCKPSPLPQHVQ*SAGSHA Trigger: AGCATGTGACCCTGCACTGCACTGCACATGCTGAGG...GAGAGGGCTCGGCTTGCACATAGACGGTACATTGTTTATTACTGTCCATGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR GCA 72 bp | CTACCCTCAGTCCCCTCCTCAGCATGTGCAGTGCAGTaGAGGGTCACATGCTTGGCGCTGGCGCGATGGTGC | + |
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Preference number: 3 (lower is better) Translates to: LPSVPSSACAVQ*RVTCLALARWC Trigger: GCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGGAGGGGACTGAGGGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR GCA 72 bp | CAGTGCAGGGTCACATGCTTGGCGCTGGCGCGATGGTaGTGGGTACACTTCCGGAGAGACAGACAGGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: QCRVTCLALARW*WVHFRRDRQEV Trigger: CACCTCCTGTCTGTCTCTCCGGAAGTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR GCA 72 bp | CCCTCCTCAGCATGTGCAGTGCAGTGCAGGGTCACATaGTTGGCGCTGGCGCGATGGTGCTGGGTACACTTC | + |
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Preference number: 3 (lower is better) Translates to: PSSACAVQCRVT*LALARWCWVHF Trigger: GAAGTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR CCA 72 bp | GTGCAGTGCAGGGTCACATGCTTGGCGCTGGCGCGATaGTGCTGGGTACACTTCCGGAGAGACAGACAGGAG | + |
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Preference number: 3 (lower is better) Translates to: VQCRVTCLALAR*CWVHFRRDRQE Trigger: CTCCTGTCTGTCTCTCCGGAAGTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR CCA 72 bp | CCTCAGCATGTGCAGTGCAGTGCAGGGTCACATGCTTaGCGCTGGCGCGATGGTGCTGGGTACACTTCCGGA | + |
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Preference number: 3 (lower is better) Translates to: PQHVQCSAGSHA*RWRDGAGYTSG Trigger: TCCGGAAGTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR CCA 72 bp | TGCAGGGTCACATGCTTGGCGCTGGCGCGATGGTGCTaGGTACACTTCCGGAGAGACAGACAGGAGGTGATG | + |
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Preference number: 3 (lower is better) Translates to: CRVTCLALARWC*VHFRRDRQEVM Trigger: CATCACCTCCTGTCTGTCTCTCCGGAAGTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR CCA 72 bp | ACAATGTACCGTCTATGTGCAAGCCGAGCCCTCTCCTaGTCTACCCTCAGTCCCCTCCTCAGCATGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: TMYRLCASRALS*STLSPLLSMCS Trigger: ACTGCACATGCTGAGGAGGGGACTGAGGGTAGACCAGGAGAGGGCTCGGCTTGCACATAGACGGTACATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR GCA 72 bp | TGGACATGGACAGTAATAAACAATGTACCGTCTATGTaGAAGCCGAGCCCTCTCCTGGTCTACCCTCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: WTWTVINNVPSM*KPSPLLVYPQS Trigger: GGACTGAGGGTAGACCAGGAGAGGGCTCGGCTTGCACATAGACGGTACATTGTTTATTACTGTCCATGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR CCA 90 bp | CCTCCTCAGCATGTGCAGTGCAGTGCAGGGTCACATGCTTGGCGCTGGCGCGATTCAGAGCCCGCCGTGTaGTCTCCACCTCCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PPQHVQCSAGSHAWRWRDSEPAV*SPPPWS Trigger: TGACCAGGGAGGTGGAGACCACACGGCGGGCTCTGA...ATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR TCA 90 bp | GTGCAGTGCAGTGCAGGGTCACATGCTTGGCGCTGGCGCGATGGTGCTGGGTACGCCCCCAATTTCATCTaGGGACAGGACCTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VQCSAGSHAWRWRDGAGYAPNFI*GQDLLQ Trigger: CTGCAGGAGGTCCTGTCCTCAGATGAAATTGGGGGC...GTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR GCA 90 bp | CAGTGCAGTGCAGGGTCACATGCTTGGCGCTGGCGCGATGGTGCTGGGTACACTTTCTCCTTCATGCGTTaGTTCCCAGGCCGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QCSAGSHAWRWRDGAGYTFSFMR*FPGRAG Trigger: CCCAGCCCGGCCTGGGAAGCAACGCATGAAGGAGAA...AGTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR CCA 90 bp | GCGCTGGCGCGATGGTGCTGGGTACACTTCCGGAGAGACAGACAGGAGGTGATGGCGTGTGACCTCTGTTaGCCCTGGCTCCTCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: ALARWCWVHFRRDRQEVMACDLC*PWLLCQ Trigger: CTGACAGAGGAGCCAGGGCCAACAGAGGTCACACGC...CATCACCTCCTGTCTGTCTCTCCGGAAGTGTACCCAGCACCATCGCGCCAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCAGCATGTGCAGTGCAGTGCAGGGTCACATGCTTGGCGCTGGCGCGAGGAGAGCGAGGGCTTTaGGATGTGCGTGTGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSSACAVQCRVTCLALARGERGL*DVRVTS Trigger: AGAGGTCACACGCACATCCCAAAGCCCTCGCTCTCC...TCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR CCA 90 bp | TGCTTGGCGCTGGCGCGATGGTGCTGGGTACACTTCCGGAGAGACAGACAGGAGCTTCCCAGGCCGGGCTaGGCACTGACCACTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: CLALARWCWVHFRRDRQELPRPG*ALTTLF Trigger: AAACAGAGTGGTCAGTGCCCAGCCCGGCCTGGGAAG...CTCCTGTCTGTCTCTCCGGAAGTGTACCCAGCACCATCGCGCCAGCGCCAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| 3UTR CAA 72 bp | TCCTCAGCATGTGCAGTGCAGTGCAGGGTCACATGCTaGGCGCTGGCGCGATGGTGCTGGGTACACTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SSACAVQCRVTC*ALARWCWVHFR Trigger: CCGGAAGTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR TCA 90 bp | CCCTCAGTCCCCTCCTCAGCATGTGCAGTGCAGTGCAGGGTCACATGCTTGGCGACACCGTCTCCAAGGTaGAAGGCAGGGACTCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSVPSSACAVQCRVTCLATPSPR*KAGTQL Trigger: CAGCTGAGTCCCTGCCTTTCACCTTGGAGACGGTGT...CGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGGAGGGGACTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR GCA 90 bp | CCTCCTCAGCATGTGCAGTGCAGTGCAGGGTCACATGCTTGGCGCTGGCGCGATAGGCGCTCGATTTCCTaGTTGAGCCGCTCGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PPQHVQCSAGSHAWRWRDRRSIS*LSRSFS Trigger: AGAGAACGAGCGGCTCAAGCAGGAAATCGAGCGCCT...ATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR CCA 90 bp | GTCACATGCTTGGCGCTGGCGCGATGGTGCTGGGTACACTTCCGGAGAGACAGATGGTCTCCACCTCCCTaGTCAGGCGCTCGATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VTCLALARWCWVHFRRDRWSPPP*SGARFP Trigger: AGGAAATCGAGCGCCTGACCAGGGAGGTGGAGACCA...TCTGTCTCTCCGGAAGTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR TCA 90 bp | GTCACATGCTTGGCGCTGGCGCGATGGTGCTGGGTACACTTCCGGAGAGACAGAGCTCGATTTCCTGCTTaGGCCGCTCGTTCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VTCLALARWCWVHFRRDRARFPA*AARSLQ Trigger: CTGAAGAGAACGAGCGGCTCAAGCAGGAAATCGAGC...TCTGTCTCTCCGGAAGTGTACCCAGCACCATCGCGCCAGCGCCAAGCATGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR TCA 90 bp | GCGCTGGCGCGATGGTGCTGGGTACACTTCCGGAGAGACAGACAGGAGGTGATGTTCGTTTCCTGGGGATaGGATATAGGTGCCCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: ALARWCWVHFRRDRQEVMFVSWG*DIGAPN Trigger: ATTGGGGGCACCTATATCTCATCCCCAGGAAACGAA...CATCACCTCCTGTCTGTCTCTCCGGAAGTGTACCCAGCACCATCGCGCCAGCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR TCA 90 bp | CTCCTCAGCATGTGCAGTGCAGTGCAGGGTCACATGCTTGGCGCTGGCGCGATGAGTAGTGAAGGTTTTTaGTTCTTCCTCTTCGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LLSMCSAVQGHMLGAGAMSSEGF*FFLFVS Trigger: GGAAACGAAGAGGAAGAATCAAAAACCTTCACTACT...CATCGCGCCAGCGCCAAGCATGTGACCCTGCACTGCACTGCACATGCTGAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR TCA 90 bp | ATGGACAGTAATAAACAATGTACCGTCTATGTGCAAGCCGAGCCCTCTCCTGGTATGCTTGGTGCAGGCTaGCCATGCGGTCGATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: MDSNKQCTVYVQAEPSPGMLGAG*PCGRSE Trigger: CTCTGATCGACCGCATGGTCAGCCTGCACCAAGCAT...ACCAGGAGAGGGCTCGGCTTGCACATAGACGGTACATTGTTTATTACTGTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR GCA 90 bp | AATAAACAATGTACCGTCTATGTGCAAGCCGAGCCCTCTCCTGGTCTACCCTCAGAGGACAGGACCTCCTaGAGATCCTCATACCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: NKQCTVYVQAEPSPGLPSEDRTS*RSSYQA Trigger: AGCCTGGTATGAGGATCTGCAGGAGGTCCTGTCCTC...TGAGGGTAGACCAGGAGAGGGCTCGGCTTGCACATAGACGGTACATTGTTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR CCA 90 bp | TCACTTTACTGGACATGGACAGTAATAAACAATGTACCGTCTATGTGCAAGCCGACTCTGACTGGAATCTaGAGAGCGAGGGCTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLYWTWTVINNVPSMCKPTLTGI*RARALG Trigger: TCCCAAAGCCCTCGCTCTCCAGATTCCAGTCAGAGT...CGGCTTGCACATAGACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS-3UTR CAA 90 bp | TCTCCTGGTCTACCCTCAGTCCCCTCCTCAGCATGTGCAGTGCAGTGCAGGGTCCTTCTCCTTCATGCGTaGCTTCCCAGGCCGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SPGLPSVPSSACAVQCRVLLLHA*LPRPGW Trigger: CCAGCCCGGCCTGGGAAGCAACGCATGAAGGAGAAG...GACCCTGCACTGCACTGCACATGCTGAGGAGGGGACTGAGGGTAGACCAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026475.15 |
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| CDS CCA 90 bp | CTCTTCCTCCTCTTCCTCCTGGGCCATAGAACTCTGACTGGAATCTaGAGAGCGAGGGCTTTGGGATGTGCGTGTGACCTCTGTTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LFLLFLLGHRTLTGI*RARALGCACDLCWP Trigger: GGGCCAACAGAGGTCACACGCACATCCCAAAGCCCTCGCTCTCCAGATTCCAGTCAGAGTTCTATGGCCCAGGAGGAAGAGGAGGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026475.15 ENSMUST00000139091.2 |
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| CDS CAA 90 bp | CGCCGTGTGGTCTCCACCTCCCTGGTCAGGCGCTCGATTTCCTGCTaGAGCCGCTCGTTCTCTTCAGCTAGCTGTGCCACTTTCCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RRVVSTSLVRRSISC*SRSFSSASCATFRS Trigger: CGAGCGGAAAGTGGCACAGCTAGCTGAAGAGAACGAGCGGCTCAAGCAGGAAATCGAGCGCCTGACCAGGGAGGTGGAGACCACACGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026475.15 ENSMUST00000139091.2 |
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| CDS CAA 90 bp | CTCCTGGGCCATAGAACTCTGACTGGAATCTGGAGAGCGAGGGCTTaGGGATGTGCGTGTGACCTCTGTTGGCCCTGGCTCCTCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLGHRTLTGIWRARA*GCACDLCWPWLLCQ Trigger: CTGACAGAGGAGCCAGGGCCAACAGAGGTCACACGCACATCCCAAAGCCCTCGCTCTCCAGATTCCAGTCAGAGTTCTATGGCCCAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026475.15 ENSMUST00000139091.2 |
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| CDS CCA 72 bp | CTCCTTCTCCTTCATGCGTTGCTTCCCAGGCCGGGCTaGGCACTGACCACTCTGTTTCCGTTTCCTAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLLLHALLPRPG*ALTTLFPFPSS Trigger: AGAACTAGGAAACGGAAACAGAGTGGTCAGTGCCCAGCCCGGCCTGGGAAGCAACGCATGAAGGAGAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026475.15 ENSMUST00000139091.2 |
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| CDS CAA 72 bp | CATAGAACTCTGACTGGAATCTGGAGAGCGAGGGCTTaGGGATGTGCGTGTGACCTCTGTTGGCCCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: HRTLTGIWRARA*GCACDLCWPWL Trigger: GAGCCAGGGCCAACAGAGGTCACACGCACATCCCAAAGCCCTCGCTCTCCAGATTCCAGTCAGAGTTCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026475.15 ENSMUST00000139091.2 |
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