RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDI2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078515

Ensembl transcript IDs: ENSMUST00000102484.5, ENSMUST00000177592.2

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTaGTCTCCGGCCTGTCTGGGCCTGGATTATGCACATGCTCTGAAG +
Preference number: 1 (lower is better)
Translates to: GPIHYGATQLQGRHC*SPACLGLDYAHALK
Trigger: CTTCAGAGCATGTGCATAATCCAGGCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp AACGGTGGAAGAACGGAGGGGGTGGACAAGGACTGTGTGGGAGGTTaGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTG +
Preference number: 1 (lower is better)
Translates to: NGGRTEGVDKDCVGG*SNPLRGNPAPGQTL
Trigger: CAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp ATACAAGCTCACCACACCTGGCTTCTGCAGTGCTGGGGGTTGGACTaGGGGCTTTCTGCAGCTAGGCAGGCATTCTGCCTGCCGCTGTGC +
Preference number: 1 (lower is better)
Translates to: IQAHHTWLLQCWGLD*GLSAARQAFCLPLC
Trigger: GCACAGCGGCAGGCAGAATGCCTGCCTAGCTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTGAGCTTGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp TGGGAATACAAGCTCACCACACCTGGCTTCTGCAGTGCTGGGGGTTaGACTGAGGGCTTTCTGCAGCTAGGCAGGCATTCTGCCTGCCGC +
Preference number: 1 (lower is better)
Translates to: WEYKLTTPGFCSAGG*TEGFLQLGRHSACR
Trigger: GCGGCAGGCAGAATGCCTGCCTAGCTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTGAGCTTGTATTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp AAATGGAGACCACTGCTGGAGGAAAGCAGTCACCACAGAACGCCCTaGCAGTGGTCTGGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGG +
Preference number: 1 (lower is better)
Translates to: KWRPLLEESSHHRTP*QWSGRGAALAVTVG
Trigger: CCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp ACTGCTGGAGGAAAGCAGTCACCACAGAACGCCCTGACAGTGGTCTaGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGGATCTGACAGGA +
Preference number: 1 (lower is better)
Translates to: TAGGKQSPQNALTVV*PRSCPCCYSWDLTG
Trigger: TCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp GAAACAGAGCGAGCGAGACTCGTCGGGCTACCAACCTCAGGACTCTaGCCTGAAGGAGCTGGATGGTCAAACCCATCTGAAGTCGGCAAT +
Preference number: 1 (lower is better)
Translates to: ETERARLVGLPTSGL*PEGAGWSNPSEVGN
Trigger: ATTGCCGACTTCAGATGGGTTTGACCATCCAGCTCCTTCAGGGCAGAGTCCTGAGGTTGGTAGCCCGACGAGTCTCGCTCGCTCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp GACTCAGAACGTCACCCCCACCCCCAAGCCAACACCAGGCTTCACTaGACTTCCTGTTCTTGCTTCAGACATGGCTCTAAGCTGGGTGAC +
Preference number: 1 (lower is better)
Translates to: DSERHPHPQANTRLH*TSCSCFRHGSKLGD
Trigger: GTCACCCAGCTTAGAGCCATGTCTGAAGCAAGAACAGGAAGTGCAGTGAAGCCTGGTGTTGGCTTGGGGGTGGGGGTGACGTTCTGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp AAGCAGTCACCACAGAACGCCCTGACAGTGGTCTGGCCGAGGAGCTaGCCTTGCTGTTACAGTTGGGATCTGACAGGATCAACACTGGGT +
Preference number: 1 (lower is better)
Translates to: KQSPQNALTVVWPRS*PCCYSWDLTGSTLG
Trigger: ACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp CGCTTCCTGCAGAGTGAAGCCGGCACCAAGAATCCTGTCAACATCTaGAGCAGGAAAGATGAACGGTGGAAGAACGGAGGGGGTGGACAA +
Preference number: 1 (lower is better)
Translates to: RFLQSEAGTKNPVNI*SRKDERWKNGGGGQ
Trigger: TTGTCCACCCCCTCCGTTCTTCCACCGTTCATCTTTCCTGCTGCAGATGTTGACAGGATTCTTGGTGCCGGCTTCACTCTGCAGGAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp CCCAAACTTCCACATGGGAGAGTCGTTGGGCCACACCACTGCCTTTaGATGCCAATTTCGTCTGCTCACAAAGGCCTTCTGGGAGGAGTC +
Preference number: 1 (lower is better)
Translates to: PKLPHGRVVGPHHCL*MPISSAHKGLLGGV
Trigger: GACTCCTCCCAGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGAAGTTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp CTCGTCGGGCTACCAACCTCAGGACTCTGCCCTGAAGGAGCTGGATaGTCAAACCCATCTGAAGTCGGCAATGATGACATTCCCAGTGAG +
Preference number: 1 (lower is better)
Translates to: LVGLPTSGLCPEGAG*SNPSEVGNDDIPSE
Trigger: CTCACTGGGAATGTCATCATTGCCGACTTCAGATGGGTTTGACCATCCAGCTCCTTCAGGGCAGAGTCCTGAGGTTGGTAGCCCGACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp GGCACCAAGAATCCTGTCAACATCTGCAGCAGGAAAGATGAACGGTaGAAGAACGGAGGGGGTGGACAAGGACTGTGTGGGAGGTTGGTC +
Preference number: 1 (lower is better)
Translates to: GTKNPVNICSRKDER*KNGGGGQGLCGRLV
Trigger: GACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGTTCATCTTTCCTGCTGCAGATGTTGACAGGATTCTTGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp TCGCAGTTCTCAGTCTCCCAGACTCTCAAAGCATCTGACCGTGGCTaGGAGGGCCACTGGCAAGCAGGTTTTGCTAACCAGACCAGATCT +
Preference number: 1 (lower is better)
Translates to: SQFSVSQTLKASDRG*EGHWQAGFANQTRS
Trigger: AGATCTGGTCTGGTTAGCAAAACCTGCTTGCCAGTGGCCCTCCCAGCCACGGTCAGATGCTTTGAGAGTCTGGGAGACTGAGAACTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp ACCAAGGCCACTGTTGTCAGAACTTCCATTGTATTTCCACCGCCATaGGGGGCGCTCACAAACAAGTACCGAGAGAGGGGCCAGGGACAA +
Preference number: 1 (lower is better)
Translates to: TKATVVRTSIVFPPP*GALTNKYRERGQGQ
Trigger: TTGTCCCTGGCCCCTCTCTCGGTACTTGTTTGTGAGCGCCCCTCATGGCGGTGGAAATACAATGGAAGTTCTGACAACAGTGGCCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp CACTTCTGCTCTGGATTCTCCTTCACACACTGCAGAGGCCTTGGCTaGGTTCTGCTCTGGAGGGTGGAGCAGTCACCTATCTTAGAGCTG +
Preference number: 1 (lower is better)
Translates to: HFCSGFSFTHCRGLG*VLLWRVEQSPILEL
Trigger: CAGCTCTAAGATAGGTGACTGCTCCACCCTCCAGAGCAGAACTCAGCCAAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGAGCAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp GAGAGTCGTTGGGCCACACCACTGCCTTTGCATGCCAATTTCGTCTaGTCACAAAGGCCTTCTGGGAGGAGTCTGCCATCAGTACTTTCT +
Preference number: 1 (lower is better)
Translates to: ESRWATPLPLHANFV*SQRPSGRSLPSVLS
Trigger: AGAAAGTACTGATGGCAGACTCCTCCCAGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp CAGTGGTCTGGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGGATCTaGCAGGATCAACACTGGGTTCACACTGATGTGATCTTACTCCTA +
Preference number: 1 (lower is better)
Translates to: QWSGRGAALAVTVGI*QDQHWVHTDVILLL
Trigger: TAGGAGTAAGATCACATCAGTGTGAACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp GCTGCAAGTTCAGGTGCTATTTCTACCCCTGAGGTGCAGGGCAACTaGTCAGACAGTTTAGCTGAGGTTATGGCGACAGAACAGCTCTTC +
Preference number: 1 (lower is better)
Translates to: AASSGAISTPEVQGN*SDSLAEVMATEQLF
Trigger: GAAGAGCTGTTCTGTCGCCATAACCTCAGCTAAACTGTCTGAGCAGTTGCCCTGCACCTCAGGGGTAGAAATAGCACCTGAACTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp CAATCACTTCTGCTCTGGATTCTCCTTCACACACTGCAGAGGCCTTaGCTGAGTTCTGCTCTGGAGGGTGGAGCAGTCACCTATCTTAGA +
Preference number: 1 (lower is better)
Translates to: QSLLLWILLHTLQRP*LSSALEGGAVTYLR
Trigger: TCTAAGATAGGTGACTGCTCCACCCTCCAGAGCAGAACTCAGCCAAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGAGCAGAAGTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp CTACAGAGTCCTGAAGCTGGAAGACCCTTCTCTGCACTGGGAAGATaGGCGTGTCTTTGTAGCTCACCTTTCCTCAGAGCTTCCAAACTG +
Preference number: 1 (lower is better)
Translates to: LQSPEAGRPFSALGR*ACLCSSPFLRASKL
Trigger: CAGTTTGGAAGCTCTGAGGAAAGGTGAGCTACAAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTCTTCCAGCTTCAGGACTCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp ATGTGCTACACTAGGGCTCTTGATGACGGCATCCTGCCTGCCTGTTaGGCTGCACATAGCAACCAGAGACTGTTCAGCTGTATCTACTTC +
Preference number: 1 (lower is better)
Translates to: MCYTRALDDGILPAC*AAHSNQRLFSCIYF
Trigger: GAAGTAGATACAGCTGAACAGTCTCTGGTTGCTATGTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAAGAGCCCTAGTGTAGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp CAGAGCTTCCAAACTGACAACTTCTTCATGAAGCTCAAGGTCTTCTaGGTCACAAAGACAGCCCTGGTCCTGTGGAACACTCTGCTGTCC +
Preference number: 1 (lower is better)
Translates to: QSFQTDNFFMKLKVF*VTKTALVLWNTLLS
Trigger: GGACAGCAGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTCATGAAGAAGTTGTCAGTTTGGAAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp CTATCCAGAGTGATTATTGCACAGTGGGGCCCACGGACAGAGACTTaGAAGGCGAGGGCTTACACTAAAAAGGCCACAACAAACACAGCT +
Preference number: 1 (lower is better)
Translates to: LSRVIIAQWGPRTET*KARAYTKKATTNTA
Trigger: AGCTGTGTTTGTTGTGGCCTTTTTAGTGTAAGCCCTCGCCTTGCAAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCACTCTGGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp ATGGACAGCTACAGAGTCCTGAAGCTGGAAGACCCTTCTCTGCACTaGGAAGATGAGCGTGTCTTTGTAGCTCACCTTTCCTCAGAGCTT +
Preference number: 1 (lower is better)
Translates to: MDSYRVLKLEDPSLH*EDERVFVAHLSSEL
Trigger: AAGCTCTGAGGAAAGGTGAGCTACAAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTCTTCCAGCTTCAGGACTCTGTAGCTGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp ACCACTGCCTTTGCATGCCAATTTCGTCTGCTCACAAAGGCCTTCTaGGAGGAGTCTGCCATCAGTACTTTCTTTTATCCACCCCACCCT +
Preference number: 1 (lower is better)
Translates to: TTAFACQFRLLTKAF*EESAISTFFYPPHP
Trigger: AGGGTGGGGTGGATAAAAGAAAGTACTGATGGCAGACTCCTCCCAGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp ATTTTAGCTAGGGCCACTTCCCAAACTTCCACATGGGAGAGTCGTTaGGCCACACCACTGCCTTTGCATGCCAATTTCGTCTGCTCACAA +
Preference number: 1 (lower is better)
Translates to: ILARATSQTSTWESR*ATPLPLHANFVCSQ
Trigger: TTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGAAGTTTGGGAAGTGGCCCTAGCTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp GAGCTTTACAAGAAAATCCTTTGGTGCATAAATGGAGACCACTGCTaGAGGAAAGCAGTCACCACAGAACGCCCTGACAGTGGTCTGGCC +
Preference number: 1 (lower is better)
Translates to: ELYKKILWCINGDHC*RKAVTTERPDSGLA
Trigger: GGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp TACACTCCCTGTTTCTCTGTGCTGCTGAAGGCCGTTCACGGGACTTaGGGTCTGATTTTCTGGATGCCAACTCTTTTCCTCCGCAAATAT +
Preference number: 1 (lower is better)
Translates to: YTPCFSVLLKAVHGT*GLIFWMPTLFLRKY
Trigger: ATATTTGCGGAGGAAAAGAGTTGGCATCCAGAAAATCAGACCCCAAGTCCCGTGAACGGCCTTCAGCAGCACAGAGAAACAGGGAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp CTGGTACTCTATATTTTAGCTAGGGCCACTTCCCAAACTTCCACATaGGAGAGTCGTTGGGCCACACCACTGCCTTTGCATGCCAATTTC +
Preference number: 1 (lower is better)
Translates to: LVLYILARATSQTST*ESRWATPLPLHANF
Trigger: GAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGAAGTTTGGGAAGTGGCCCTAGCTAAAATATAGAGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp TGTAGCTCACCTTTCCTCAGAGCTTCCAAACTGACAACTTCTTCATaGAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGT +
Preference number: 1 (lower is better)
Translates to: CSSPFLRASKLTTSS*SSRSSASQRQPWSC
Trigger: ACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTCATGAAGAAGTTGTCAGTTTGGAAGCTCTGAGGAAAGGTGAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp GAAAGGTCTGAAACACTTGGTTGGCTCTCAGCTCCTATCTCTGACTaGCAGGTAACATGCTCAGGTGACTCTTCTGAAGCTGGCTTACAG +
Preference number: 1 (lower is better)
Translates to: ERSETLGWLSAPISD*QVTCSGDSSEAGLQ
Trigger: CTGTAAGCCAGCTTCAGAAGAGTCACCTGAGCATGTTACCTGTCAGTCAGAGATAGGAGCTGAGAGCCAACCAAGTGTTTCAGACCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp TGTGAGCTTTACAAGAAAATCCTTTGGTGCATAAATGGAGACCACTaGTGGAGGAAAGCAGTCACCACAGAACGCCCTGACAGTGGTCTG +
Preference number: 1 (lower is better)
Translates to: CELYKKILWCINGDH*WRKAVTTERPDSGL
Trigger: CAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp CGCATCCCAGTAGTTGTGAGAGTTAAACTAGCGTCCTGTCTTGTGTaGAGATACACTCTGAGGCCCTGGGTTCCTTTCTCAACAGATTTC +
Preference number: 1 (lower is better)
Translates to: RIPVVVRVKLASCLV*RYTLRPWVPFSTDF
Trigger: GAAATCTGTTGAGAAAGGAACCCAGGGCCTCAGAGTGTATCTCCACACAAGACAGGACGCTAGTTTAACTCTCACAACTACTGGGATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp GATTACCTGCAACAACGGCTTCTTTTGATGACTTATGGAAAGGCATaGCTAGACTCTGCTCTGCTGAGGAAGCAAGGTCAGGAAGAACCT +
Preference number: 1 (lower is better)
Translates to: DYLQQRLLLMTYGKA*LDSALLRKQGQEEP
Trigger: AGGTTCTTCCTGACCTTGCTTCCTCAGCAGAGCAGAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGAAGCCGTTGTTGCAGGTAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp CCTGTTCTTGCTTCAGACATGGCTCTAAGCTGGGTGACAGAATCCTaGGAGCAATTTCCTAGCGAATCACACAGACATCTTTGGTGTAGA +
Preference number: 1 (lower is better)
Translates to: PVLASDMALSWVTES*EQFPSESHRHLWCR
Trigger: TCTACACCAAAGATGTCTGTGTGATTCGCTAGGAAATTGCTCCCAGGATTCTGTCACCCAGCTTAGAGCCATGTCTGAAGCAAGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp TCTCCAGCCCTTCAGCTTGAGTGTGAGCTTTACAAGAAAATCCTTTaGTGCATAAATGGAGACCACTGCTGGAGGAAAGCAGTCACCACA +
Preference number: 1 (lower is better)
Translates to: SPALQLECELYKKIL*CINGDHCWRKAVTT
Trigger: TGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTCACACTCAAGCTGAAGGGCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp GATTTCTCCAGATTACCTGCAACAACGGCTTCTTTTGATGACTTATaGAAAGGCATGGCTAGACTCTGCTCTGCTGAGGAAGCAAGGTCA +
Preference number: 1 (lower is better)
Translates to: DFSRLPATTASFDDL*KGMARLCSAEEARS
Trigger: TGACCTTGCTTCCTCAGCAGAGCAGAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGAAGCCGTTGTTGCAGGTAATCTGGAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp GGAACACAGGTCTATTCTGCAGGTCACAGACACACTCATTTTAGTTaGCAGGTTTGGGGCAACCAAACTCTTAAGTACAATCACTGCCCA +
Preference number: 1 (lower is better)
Translates to: GTQVYSAGHRHTHFS*QVWGNQTLKYNHCP
Trigger: TGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCAAACCTGCCAACTAAAATGAGTGTGTCTGTGACCTGCAGAATAGACCTGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 90 bp AACAGTTTATATTCCAGGAAAGGATTCTTTCAAACCTATCCAGAGTaGTTATTGCACAGTGGGGCCCACGGACAGAGACTTGCAAGGCGA +
Preference number: 1 (lower is better)
Translates to: NSLYSRKGFFQTYPE*LLHSGAHGQRLARR
Trigger: TCGCCTTGCAAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCACTCTGGATAGGTTTGAAAGAATCCTTTCCTGGAATATAAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp GGTGACTCTTCTGAAGCTGGCTTACAGCTAATGACCAAAAGCTCATaGAGTTCTTTCAAGGCCACTGTGACAGATGAACAAAATTCTTCT +
Preference number: 1 (lower is better)
Translates to: GDSSEAGLQLMTKSS*SSFKATVTDEQNSS
Trigger: AGAAGAATTTTGTTCATCTGTCACAGTGGCCTTGAAAGAACTCCATGAGCTTTTGGTCATTAGCTGTAAGCCAGCTTCAGAAGAGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp ATTGTCATCTTTGTTATCCATTGTAGACATGTCAACATTATCTTCTaGGAGCTGCAATTCCCGAGTCAAGATGGAATGTTCCACAGGCTC +
Preference number: 1 (lower is better)
Translates to: IVIFVIHCRHVNIIF*ELQFPSQDGMFHRL
Trigger: GAGCCTGTGGAACATTCCATCTTGACTCGGGAATTGCAGCTCCCAGAAGATAATGTTGACATGTCTACAATGGATAACAAAGATGACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp AGACAGAGCTATGTAAGATGCACTCATGTTCTATGCCTTATGATCTaGGGTTCAAACTTTGCAGGTAAACAAACTCCCATGTTGAGCCAT +
Preference number: 1 (lower is better)
Translates to: RQSYVRCTHVLCLMI*GSNFAGKQTPMLSH
Trigger: ATGGCTCAACATGGGAGTTTGTTTACCTGCAAAGTTTGAACCCCAGATCATAAGGCATAGAACATGAGTGCATCTTACATAGCTCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 90 bp CCAAATGCTATTGTGTTAACTACCGAGAGGGAAATTACACAGTTCTaGTCAGCCACAGACTTTATTAAATCCCAAGACTGGCTTTTACTT +
Preference number: 1 (lower is better)
Translates to: PNAIVLTTEREITQF*SATDFIKSQDWLLL
Trigger: AAGTAAAAGCCAGTCTTGGGATTTAATAAAGTCTGTGGCTGACCAGAACTGTGTAATTTCCCTCTCGGTAGTTAACACAATAGCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 90 bp ATCAAAACCTTCTTTAGTTGCTTTCTCAGACAGAGCTATGTAAGATaGACTCATGTTCTATGCCTTATGATCTGGGGTTCAAACTTTGCA +
Preference number: 1 (lower is better)
Translates to: IKTFFSCFLRQSYVR*THVLCLMIWGSNFA
Trigger: TGCAAAGTTTGAACCCCAGATCATAAGGCATAGAACATGAGTGCATCTTACATAGCTCTGTCTGAGAAAGCAACTAAAGAAGGTTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR GCA 90 bp GCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTGGGAGGGCTGGGGTGTCAGTCGGGCCCACTCCAGCTaGAGCACACACACACTACAT +
Preference number: 2 (lower is better)
Translates to: ASRLLAVSPDHWEGWGVSRAHSS*STHTLH
Trigger: ATGTAGTGTGTGTGTGCTGCAGCTGGAGTGGGCCCG...ACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp GCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTGGGAGGGCTGGGGTGTCAGTGGTCTCCGGCCTGTCTaGGCCTGGATTATGCACATG +
Preference number: 2 (lower is better)
Translates to: ASRLLAVSPDHWEGWGVSGLRPV*AWIMHM
Trigger: CATGTGCATAATCCAGGCCCAGACAGGCCGGAGACC...ACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 90 bp GAACGGTGGAAGAACGGAGGGGGTGGACAAGGACTGTGTGGGAGGTaGGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACT +
Preference number: 2 (lower is better)
Translates to: ERWKNGGGGQGLCGR*VQSTTGQPSSRADT
Trigger: AGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp GGTTGGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTGGTCACAGCTACAGAGTCCTaGAGCTGGAAGACCCTTCTC +
Preference number: 2 (lower is better)
Translates to: GWSNPLRGNPAPGQTLLVTATES*SWKTLL
Trigger: GAGAAGGGTCTTCCAGCTTCAGGACTCTGTAGCTGT...GACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp AAGTACCGAGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTGCTCGCTGTGACTGTGTGGGAGGTTaGTCCAATCCACTACGGGGC +
Preference number: 2 (lower is better)
Translates to: KYRERGQGQKALPALARCDCVGG*SNPLRG
Trigger: GCCCCGTAGTGGATTGGACCAACCTCCCACACAGTC...ACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCTCGGTACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp ACGTCGGGATTCCTGAGAGCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAACAGGGCAGACACTGCTaGTCTCCGGCCTGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: TSGFLRASSQFSVSQTLKQGRHC*SPACLG
Trigger: GCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTG...TTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGCTCTCAGGAATCCCGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 90 bp GTCACCACAGAACGCCCTGACAGTGGTCTGGCCGAGGAGCTGCCCTaGCTGTTACAGTTGGGATCTGACAGGATCAACACTGGGTTCACA +
Preference number: 2 (lower is better)
Translates to: VTTERPDSGLAEELP*LLQLGSDRINTGFT
Trigger: TGTGAACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR GCA 90 bp AAGTACCGAGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTGCTCGCTGTGTGGGCACCCTCACTTaGTGCAAGTTCAGGTGCTAT +
Preference number: 2 (lower is better)
Translates to: KYRERGQGQKALPALARCVGTLT*CKFRCY
Trigger: ATAGCACCTGAACTTGCAGCAAGTGAGGGTGCCCAC...ACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCTCGGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 90 bp GTAGCCTCCATAGCTAGAGATTCAATGCTATTGGGGTCACCGGGCTaGATGGCGCAGACGGAAGCAGAAACAGAGCGAGCGAGACTCGTC +
Preference number: 2 (lower is better)
Translates to: VASIARDSMLLGSPG*MAQTEAETERARLV
Trigger: GACGAGTCTCGCTCGCTCTGTTTCTGCTTCCGTCTGCGCCATCAAGCCCGGTGACCCCAATAGCATTGAATCTCTAGCTATGGAGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTGTTTCTCTGTGCTGCTaGAGGCCGTTCACGGGACTT +
Preference number: 2 (lower is better)
Translates to: HQTIPLSPVALLVIHQTVVSLCC*RPFTGL
Trigger: AAGTCCCGTGAACGGCCTTCAGCAGCACAGAGAAAC...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp AAGTACCGAGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTGCTCGCTGTCTCAGACAGTTTAGCTaGGGTTATGGCGACAGAACA +
Preference number: 2 (lower is better)
Translates to: KYRERGQGQKALPALARCLRQFS*GYGDRT
Trigger: TGTTCTGTCGCCATAACCTCAGCTAAACTGTCTGAG...ACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCTCGGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR GCA 90 bp GCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAAGCATCTGACCGTGGCTGGATCCAGAGTGATTATTaGACAGTGGGGCCCACGGAC +
Preference number: 2 (lower is better)
Translates to: ASSQFSVSQTLKASDRGWIQSDY*TVGPTD
Trigger: GTCCGTGGGCCCCACTGTGCAATAATCACTCTGGAT...CCAGCCACGGTCAGATGCTTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAAGTGATTATTGCACAGTaGGGCCCACGGACAGAGACT +
Preference number: 2 (lower is better)
Translates to: SDTPDSSATGSNGNALGEVIIAQ*GPRTET
Trigger: AGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCAC...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 90 bp TCAGCTGAAGCCTTCGTAGCCTCCATAGCTAGAGATTCAATGCTATaGGGGTCACCGGGCTTGATGGCGCAGACGGAAGCAGAAACAGAG +
Preference number: 2 (lower is better)
Translates to: SAEAFVASIARDSML*GSPGLMAQTEAETE
Trigger: CTCTGTTTCTGCTTCCGTCTGCGCCATCAAGCCCGGTGACCCCAATAGCATTGAATCTCTAGCTATGGAGGCTACGAAGGCTTCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATGATCACTGGGAGGGCTaGGGTGTCAGTGAGACGCCT +
Preference number: 2 (lower is better)
Translates to: WGNQTLKYNHCPSPDRKDDHWEG*GVSETP
Trigger: AGGCGTCTCACTGACACCCCAGCCCTCCCAGTGATC...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTCTCACAAAGGCCTTCTaGGAGGAGTCTGCCATCAGT +
Preference number: 2 (lower is better)
Translates to: HQTIPLSPVALLVIHQTVLTKAF*EESAIS
Trigger: ACTGATGGCAGACTCCTCCCAGAAGGCCTTTGTGAG...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 90 bp TCCATAGTGGGATTATCTGAAGCGAGATGTGCTACACTAGGGCTCTaGATGACGGCATCCTGCCTGCCTGTTGAGCTGCACATAGCAACC +
Preference number: 2 (lower is better)
Translates to: SIVGLSEARCATLGL*MTASCLPVELHIAT
Trigger: GGTTGCTATGTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAAGAGCCCTAGTGTAGCACATCTCGCTTCAGATAATCCCACTATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTGATTTCTGTCTTTCCTaGTTCAGAGGTGGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: HQTIPLSPVALLVIHQTVDFCLS*FRGGLV
Trigger: CACCAGGCCACCTCTGAATCAGGAAAGACAGAAATC...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCAACATGCTCTGAAGGCTaGCTGTGGGCACCCTCACTT +
Preference number: 2 (lower is better)
Translates to: SSTRFHANVNFPTPFPWSTCSEG*LWAPSL
Trigger: AAGTGAGGGTGCCCACAGTCAGCCTTCAGAGCATGT...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTATGGCAGGTTCCTCATaGCTCCTGCTTTCAAAGCAC +
Preference number: 2 (lower is better)
Translates to: HQTIPLSPVALLVIHQTVMAGSS*LLLSKH
Trigger: GTGCTTTGAAAGCAGGAGTCATGAGGAACCTGCCAT...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCAGCGTCCTGTCTTGTGTaGAGATACACTCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: SSTRFHANVNFPTPFPWSASCLV*RYTLRP
Trigger: GGGCCTCAGAGTGTATCTCCACACAAGACAGGACGC...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp ACGTCGGGATTCCTGAGAGCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAATGGACAAGGACTGTGTaGGAGGTTGGTCCAATCCAC +
Preference number: 2 (lower is better)
Translates to: TSGFLRASSQFSVSQTLKWTRTV*EVGPIH
Trigger: GTGGATTGGACCAACCTCCCACACAGTCCTTGTCCA...TTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGCTCTCAGGAATCCCGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 90 bp AAAGGGATGAAGACTGCACCAAGGCCACTGTTGTCAGAACTTCCATaGTATTTCCACCGCCATGAGGGGCGCTCACAAACAAGTACCGAG +
Preference number: 2 (lower is better)
Translates to: KGMKTAPRPLLSELP*YFHRHEGRSQTSTE
Trigger: CTCGGTACTTGTTTGTGAGCGCCCCTCATGGCGGTGGAAATACAATGGAAGTTCTGACAACAGTGGCCTTGGTGCAGTCTTCATCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR GCA 90 bp CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTAACACCAGGCTTCACTaGACTTCCTGTTCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: HQTIPLSPVALLVIHQTVNTRLH*TSCSCF
Trigger: GAAGCAAGAACAGGAAGTGCAGTGAAGCCTGGTGTT...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCATCACAAAGACAGCCCTaGTCCTGTGGAACACTCTGC +
Preference number: 2 (lower is better)
Translates to: SSTRFHANVNFPTPFPWSSQRQP*SCGTLC
Trigger: GCAGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGA...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATATTATGCACATGCTCTaGAGGCTGACTGTGGGCACC +
Preference number: 2 (lower is better)
Translates to: WGNQTLKYNHCPSPDRKDIMHML*RLTVGT
Trigger: GGTGCCCACAGTCAGCCTTCAGAGCATGTGCATAAT...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp GGATGCCAACTCTTTTCCTCCGCAAATATCTGTGGCTCCCGCATCCCAGTAGTTACTTATGGAAAGGCATaGCTAGACTCTGCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: GCQLFSSANICGSRIPVVTYGKA*LDSALL
Trigger: CAGCAGAGCAGAGTCTAGCCATGCCTTTCCATAAGT...AACTACTGGGATGCGGGAGCCACAGATATTTGCGGAGGAAAAGAGTTGGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCAGACCCTTCTCTGCACTaGGAAGATGAGCGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: SSTRFHANVNFPTPFPWSDPSLH*EDERVF
Trigger: AAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTC...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAATCACACAGACATCTTTaGTGTAGAACAGGCAAAAGA +
Preference number: 2 (lower is better)
Translates to: SDTPDSSATGSNGNALGESHRHL*CRTGKR
Trigger: TCTTTTGCCTGTTCTACACCAAAGATGTCTGTGTGA...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp CACAGTTCTGGTCAGCCACAGACTTTATTAAATCCCAAGACTGGCTTTTACTTTCCTGATGGAGAGCTGTaGACCACAAGGCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: HSSGQPQTLLNPKTGFYFPDGEL*TTRPSS
Trigger: GCTGGATGGCCTTGTGGTTCACAGCTCTCCATCAGG...AAAGTAAAAGCCAGTCTTGGGATTTAATAAAGTCTGTGGCTGACCAGAACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR GCA 90 bp CCCATGGTCATGAAGGTATTTGGCAATCAGTCCATGCAGCAACCTATGATGTACAAGAAGGGCAAGGTCTaGATTCCCACCAACTCGATG +
Preference number: 2 (lower is better)
Translates to: PMVMKVFGNQSMQQPMMYKKGKV*IPTNSM
Trigger: CATCGAGTTGGTGGGAATGCAGACCTTGCCCTTCTT...GTACATCATAGGTTGCTGCATGGACTGATTGCCAAATACCTTCATGACCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR GCA 90 bp AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAATCTGGCTCAACATTTTaGTTGCAGATTTTCTACACA +
Preference number: 2 (lower is better)
Translates to: SDTPDSSATGSNGNALGESGSTF*LQIFYT
Trigger: TGTGTAGAAAATCTGCAAGCAAAATGTTGAGCCAGA...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR GCA 90 bp TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATGTACTCAGTGTGACTTaGCATCGTGTCACTGAAGTG +
Preference number: 2 (lower is better)
Translates to: WGNQTLKYNHCPSPDRKDVLSVT*HRVTEV
Trigger: CACTTCAGTGACACGATGGCAAGTCACACTGAGTAC...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp GATCTGCGGACATCTTCTCGGTCAGGTGACAAGCCATCACCCAGACCTTCAAAGTCTTTTGATGACTTATaGAAAGGCATGGCTAGACTC +
Preference number: 2 (lower is better)
Translates to: DLRTSSRSGDKPSPRPSKSFDDL*KGMARL
Trigger: GAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGA...CTTTGAAGGTCTGGGTGATGGCTTGTCACCTGACCGAGAAGATGTCCGCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp ACGTCGGGATTCCTGAGAGCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAATTCCCACAATTATGTTaGGACTACAATGTTCTTTGC +
Preference number: 2 (lower is better)
Translates to: TSGFLRASSQFSVSQTLKFPQLC*DYNVLC
Trigger: GCAAAGAACATTGTAGTCCCAACATAATTGTGGGAA...TTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGCTCTCAGGAATCCCGACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 90 bp CGTCAGGCAAATGTTCAACCACTGAGCTACACAGGTATAATTCTTTaGGAGACAGGGTTTCATGTAACCCAAGCTGACCTGAAACTCACT +
Preference number: 2 (lower is better)
Translates to: RQANVQPLSYTGIIL*ETGFHVTQADLKLT
Trigger: AGTGAGTTTCAGGTCAGCTTGGGTTACATGAAACCCTGTCTCCAAAAGAATTATACCTGTGTAGCTCAGTGGTTGAACATTTGCCTGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp CTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACGAAGAACGGAGGGGGTaGACAAGGACTGTGTGGGAG +
Preference number: 2 (lower is better)
Translates to: LLYSRIHHRHENKKLCMHEERRG*TRTVWE
Trigger: CTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTC...GTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 90 bp TTCAAAAGGAATGACGTGTGGCCTAGCCCACTTCCCACAATTATGTaGGGACTACAATGTTCTTTGCTAACAAAACAAGAAGGGCAAGGT +
Preference number: 2 (lower is better)
Translates to: FKRNDVWPSPLPTIM*GLQCSLLTKQEGQG
Trigger: ACCTTGCCCTTCTTGTTTTGTTAGCAAAGAACATTGTAGTCCCAACATAATTGTGGGAAGTGGGCTAGGCCACACGTCATTCCTTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR GCA 90 bp CACAGTTCTGGTCAGCCACAGACTTTATTAAATCCCAAGACTGGCTTTTACTTTAAAAGCCACCAGACGTaGGGTCTCTGTAGACAGAAA +
Preference number: 2 (lower is better)
Translates to: HSSGQPQTLLNPKTGFYFKSHQT*GLCRQK
Trigger: TTTCTGTCTACAGAGACCGCACGTCTGGTGGCTTTT...AAAGTAAAAGCCAGTCTTGGGATTTAATAAAGTCTGTGGCTGACCAGAACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp TATGCTATACACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGATGTGGAGATACACTCTaGGGCCCTGGGTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: YAIHKTICFIPEYIIVMRCGDTL*GPGFLS
Trigger: AGAAAGGAACCCAGGGCCTCAGAGTGTATCTCCACA...TCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTGTATAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR GCA 90 bp GAAAGGATCATGGTACTCAGTGTGACTTGCCATCGTGTCACTGAAGTGAGTCTCGCTCAACATTTTGCTTaGAGATTTTCTACACATTGT +
Preference number: 2 (lower is better)
Translates to: ERIMVLSVTCHRVTEVSLAQHFA*RFSTHC
Trigger: ACAATGTGTAGAAAATCTGCAAGCAAAATGTTGAGC...GAGACTCACTTCAGTGACACGATGGCAAGTCACACTGAGTACCATGATCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CCA 90 bp CTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACCCTGAAGGAGCTGGATaGTCAAACCCATCTGAAGTC +
Preference number: 2 (lower is better)
Translates to: LLYSRIHHRHENKKLCMHPEGAG*SNPSEV
Trigger: GACTTCAGATGGGTTTGACCATCCAGCTCCTTCAGG...GTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR TCA 90 bp TATGCTATACACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGACTGACAACTTCTTCATaGAGCTCAAGGTCTTCTGCG +
Preference number: 2 (lower is better)
Translates to: YAIHKTICFIPEYIIVMRLTTSS*SSRSSA
Trigger: CGCAGAAGACCTTGAGCTTCATGAAGAAGTTGTCAG...TCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTGTATAGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp ACAGCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTaGGAGGGCTGGGGTGTCAGTGAGACGCCTCGACCC +
Preference number: 3 (lower is better)
Translates to: TASRLLAVSPDH*EGWGVSETPRP
Trigger: GGGTCGAGGCGTCTCACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp AAGGACCACACCAGGCGGCAGTCCTCTCAGGAGGGCTaGCCTCTAACCTCCCCCTCCCGTACTCCCAAGATG +
Preference number: 3 (lower is better)
Translates to: KDHTRRQSSQEG*PLTSPSRTPKM
Trigger: CATCTTGGGAGTACGGGAGGGGGAGGTTAGAGGGCAGCCCTCCTGAGAGGACTGCCGCCTGGTGTGGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp ATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTaGTGGTCTCCGGCCTGTCTGGGCCTGGATTATGCA +
Preference number: 3 (lower is better)
Translates to: IHYGATQLQGRH*WSPACLGLDYA
Trigger: TGCATAATCCAGGCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp CCCGACCCGTCGACATCTGAAGCTCAGCCCGCCAGATaGAGACATCGGCTGCTGCAGAGGGCTGAACTAGCA +
Preference number: 3 (lower is better)
Translates to: PDPSTSEAQPAR*RHRLLQRAELA
Trigger: TGCTAGTTCAGCCCTCTGCAGCAGCCGATGTCTGCATCTGGCGGGCTGAGCTTCAGATGTCGACGGGTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp CACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTaGTCTCCGGCCTGTCTGGGCCTGGATTATGCACAT +
Preference number: 3 (lower is better)
Translates to: HYGATQLQGRHC*SPACLGLDYAH
Trigger: ATGTGCATAATCCAGGCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp AGAACGGAGGGGGTGGACAAGGACTGTGTGGGAGGTTaGTCCAATCCACTACGGGGCAACCCAGCTCCAGGG +
Preference number: 3 (lower is better)
Translates to: RTEGVDKDCVGG*SNPLRGNPAPG
Trigger: CCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp CCACTGCTGGAGGAAAGCAGTCACCACAGAACGCCCTaGCAGTGGTCTGGCCGAGGAGCTGCCCTTGCTGTT +
Preference number: 3 (lower is better)
Translates to: PLLEESSHHRTP*QWSGRGAALAV
Trigger: AACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp CACCACACCTGGCTTCTGCAGTGCTGGGGGTTGGACTaGGGGCTTTCTGCAGCTAGGCAGGCATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: HHTWLLQCWGLD*GLSAARQAFCL
Trigger: CAGGCAGAATGCCTGCCTAGCTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp ACGGTGGAAGAACGGAGGGGGTGGACAAGGACTGTGTaGGAGGTTGGTCCAATCCACTACGGGGCAACCCAG +
Preference number: 3 (lower is better)
Translates to: TVEERRGWTRTV*EVGPIHYGATQ
Trigger: CTGGGTTGCCCCGTAGTGGATTGGACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp AGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTaGTCGCTGTCTCACTCAGCTCCGACTGAGCATGAG +
Preference number: 3 (lower is better)
Translates to: REGPGTKGSPST*SLSHSAPTEHE
Trigger: CTCATGCTCAGTCGGAGCTGAGTGAGACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp CTAATGTCTCGCCAGAAGGAAGGGACGCCCAGGGGATaGAGGGAGGAGCACAGCCTCAGTCTTCCCGTGTTA +
Preference number: 3 (lower is better)
Translates to: LMSRQKEGTPRG*REEHSLSLPVL
Trigger: TAACACGGGAAGACTGAGGCTGTGCTCCTCCCTGCATCCCCTGGGCGTCCCTTCCTTCTGGCGAGACATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CAA 90 bp AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAACCCACGGACAGAGACTaGCAAGGCGAGGGCTTACAC +
Preference number: 3 (lower is better)
Translates to: SDTPDSSATGSNGNALGEPTDRD*QGEGLH
Trigger: GTGTAAGCCCTCGCCTTGCAAGTCTCTGTCCGTGGG...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp CGAGCGAGACTCGTCGGGCTACCAACCTCAGGACTCTaGCCTGAAGGAGCTGGATGGTCAAACCCATCTGAA +
Preference number: 3 (lower is better)
Translates to: RARLVGLPTSGL*PEGAGWSNPSE
Trigger: TTCAGATGGGTTTGACCATCCAGCTCCTTCAGGGCAGAGTCCTGAGGTTGGTAGCCCGACGAGTCTCGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp TTCCCACCAACTCGATGCAGAGCCCCGAGCGCTTCCTaGAGAGTGAAGCCGGCACCAAGAATCCTGTCAACA +
Preference number: 3 (lower is better)
Translates to: FPPTRCRAPSAS*RVKPAPRILST
Trigger: TGTTGACAGGATTCTTGGTGCCGGCTTCACTCTGCAGGAAGCGCTCGGGGCTCTGCATCGAGTTGGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp CCACAGAACGCCCTGACAGTGGTCTGGCCGAGGAGCTaGCCTTGCTGTTACAGTTGGGATCTGACAGGATCA +
Preference number: 3 (lower is better)
Translates to: PQNALTVVWPRS*PCCYSWDLTGS
Trigger: TGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp CAGTGCTGGGAATACAAGCTCACCACACCTGGCTTCTaGAGTGCTGGGGGTTGGACTGAGGGCTTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: QCWEYKLTTPGF*SAGGWTEGFLQ
Trigger: CTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTGAGCTTGTATTCCCAGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp GGAAAGCAGTCACCACAGAACGCCCTGACAGTGGTCTaGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGGAT +
Preference number: 3 (lower is better)
Translates to: GKQSPQNALTVV*PRSCPCCYSWD
Trigger: ATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp AAGCTCACCACACCTGGCTTCTGCAGTGCTGGGGGTTaGACTGAGGGCTTTCTGCAGCTAGGCAGGCATTCT +
Preference number: 3 (lower is better)
Translates to: KLTTPGFCSAGG*TEGFLQLGRHS
Trigger: AGAATGCCTGCCTAGCTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp TCAGTCTCCCAGACTCTCAAAGCATCTGACCGTGGCTaGGAGGGCCACTGGCAAGCAGGTTTTGCTAACCAG +
Preference number: 3 (lower is better)
Translates to: SVSQTLKASDRG*EGHWQAGFANQ
Trigger: CTGGTTAGCAAAACCTGCTTGCCAGTGGCCCTCCCAGCCACGGTCAGATGCTTTGAGAGTCTGGGAGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CAA 90 bp AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAAGCCACACCACTGCCTTaGCATGCCAATTTCGTCTGC +
Preference number: 3 (lower is better)
Translates to: SDTPDSSATGSNGNALGEATPLP*HANFVC
Trigger: GCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGC...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp TCTGGATTCTCCTTCACACACTGCAGAGGCCTTGGCTaGGTTCTGCTCTGGAGGGTGGAGCAGTCACCTATC +
Preference number: 3 (lower is better)
Translates to: SGFSFTHCRGLG*VLLWRVEQSPI
Trigger: GATAGGTGACTGCTCCACCCTCCAGAGCAGAACTCAGCCAAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp GAAGAACTTCCTAGCAGAAGTCTTCCTAACAGAGTCTaGACAGCCAGCAGGCTCCTGGCGGTCAGCCCTGAT +
Preference number: 3 (lower is better)
Translates to: EELPSRSLPNRV*TASRLLAVSPD
Trigger: ATCAGGGCTGACCGCCAGGAGCCTGCTGGCTGTGCAGACTCTGTTAGGAAGACTTCTGCTAGGAAGTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp TGGGCCACACCACTGCCTTTGCATGCCAATTTCGTCTaGTCACAAAGGCCTTCTGGGAGGAGTCTGCCATCA +
Preference number: 3 (lower is better)
Translates to: WATPLPLHANFV*SQRPSGRSLPS
Trigger: TGATGGCAGACTCCTCCCAGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp AAGCAAGAACATCAAAGGCTCACCCCAAGTCCTGACTaGGGCTCAGTGCAAGCCCTGAGGGGATGCAGGAAA +
Preference number: 3 (lower is better)
Translates to: KQEHQRLTPSPD*GSVQALRGCRK
Trigger: TTTCCTGCATCCCCTCAGGGCTTGCACTGAGCCGCAGTCAGGACTTGGGGTGAGCCTTTGATGTTCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp AAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGTaGAACACTCTGCTGTCCAGCCTCTCGCTGTACACT +
Preference number: 3 (lower is better)
Translates to: KVFCVTKTALVL*NTLLSSLSLYT
Trigger: AGTGTACAGCGAGAGGCTGGACAGCAGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp CCTGTTTGCCCACCCCAACACCAATCACTTCTGCTCTaGATTCTCCTTCACACACTGCAGAGGCCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: PVCPPQHQSLLL*ILLHTLQRPWL
Trigger: CAGCCAAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGAGCAGAAGTGATTGGTGTTGGGGTGGGCAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp ACTAGGGCTCTTGATGACGGCATCCTGCCTGCCTGTTaGGCTGCACATAGCAACCAGAGACTGTTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: TRALDDGILPAC*AAHSNQRLFSC
Trigger: ACAGCTGAACAGTCTCTGGTTGCTATGTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAAGAGCCCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp GGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGGATCTaGCAGGATCAACACTGGGTTCACACTGATGTGATC +
Preference number: 3 (lower is better)
Translates to: GRGAALAVTVGI*QDQHWVHTDVI
Trigger: GATCACATCAGTGTGAACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp TCACCCCAAGTCCTGACTGCGGCTCAGTGCAAGCCCTaGGGGGATGCAGGAAACACCAAATGCTATTGTGTT +
Preference number: 3 (lower is better)
Translates to: SPQVLTAAQCKP*GDAGNTKCYCV
Trigger: AACACAATAGCATTTGGTGTTTCCTGCATCCCCTCAGGGCTTGCACTGAGCCGCAGTCAGGACTTGGGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp AATCCTGTCAACATCTGCAGCAGGAAAGATGAACGGTaGAAGAACGGAGGGGGTGGACAAGGACTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: NPVNICSRKDER*KNGGGGQGLCG
Trigger: CCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGTTCATCTTTCCTGCTGCAGATGTTGACAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CAA 90 bp TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATAGGCTCTCCCAGCACTaGCTCGCTGTCTCACTCAGC +
Preference number: 3 (lower is better)
Translates to: WGNQTLKYNHCPSPDRKDRLSQH*LAVSLS
Trigger: GCTGAGTGAGACAGCGAGCAAGTGCTGGGAGAGCCT...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CAA 90 bp AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAACCCTTGCTGTTACAGTaGGGATCTGACAGGATCAAC +
Preference number: 3 (lower is better)
Translates to: SDTPDSSATGSNGNALGEPLLLQ*GSDRIN
Trigger: GTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGG...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp ACTGTTGTCAGAACTTCCATTGTATTTCCACCGCCATaGGGGGCGCTCACAAACAAGTACCGAGAGAGGGGC +
Preference number: 3 (lower is better)
Translates to: TVVRTSIVFPPP*GALTNKYRERG
Trigger: GCCCCTCTCTCGGTACTTGTTTGTGAGCGCCCCTCATGGCGGTGGAAATACAATGGAAGTTCTGACAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp GGAGCAGGCTTCGAGGCAGAAGGTCTCACACATTCCTaGCCGTCTACTAAAGCTTCCTTCGCCAAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: GAGFEAEGLTHS*PSTKASFAKFL
Trigger: TAGGAACTTGGCGAAGGAAGCTTTAGTAGACGGTCAGGAATGTGTGAGACCTTCTGCCTCGAAGCCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp GTGATTATTGCACAGTGGGGCCCACGGACAGAGACTTaGAAGGCGAGGGCTTACACTAAAAAGGCCACAACA +
Preference number: 3 (lower is better)
Translates to: VIIAQWGPRTET*KARAYTKKATT
Trigger: TGTTGTGGCCTTTTTAGTGTAAGCCCTCGCCTTGCAAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp GCAATCCTGTTTGCCCACCCCAACACCAATCACTTCTaGTCTGGATTCTCCTTCACACACTGCAGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: AILFAHPNTNHF*SGFSFTHCRGL
Trigger: AAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGAGCAGAAGTGATTGGTGTTGGGGTGGGCAAACAGGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CAA 90 bp TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATTTTTTCTGTGCAGTGTaGGGGGTCAAGTCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: WGNQTLKYNHCPSPDRKDFFCAV*GVKSRA
Trigger: GGCCCTGGACTTGACCCCCAACACTGCACAGAAAAA...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp CTAATGTTTGAAGAAGGTAAGAGTGAATCAGAGTGGTaGGGAGCCAAGGACCACACCAGGCGGCAGTCCTCT +
Preference number: 3 (lower is better)
Translates to: LMFEEGKSESEW*GAKDHTRRQSS
Trigger: AGAGGACTGCCGCCTGGTGTGGTCCTTGGCTCCTCACCACTCTGATTCACTCTTACCTTCTTCAAACATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp TGTCTTCCAGGTTGTAAGGGCTGCTCAAGGAGCCTGTaGACACATATCTGGTTGGCTCCTGTAGGAACACAG +
Preference number: 3 (lower is better)
Translates to: CLPGCKGCSRSL*THIWLAPVGTQ
Trigger: CTGTGTTCCTACAGGAGCCAACCAGATATGTGTTCACAGGCTCCTTGAGCAGCCCTTACAACCTGGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp AACGGGAATGCGCTGGGTGAACTGGGCATAGTTGTGTaGACCTGTAATCCTAGTATTCTAAAGGCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: NGNALGELGIVV*TCNPSILKAEA
Trigger: GGCCTCAGCCTTTAGAATACTAGGATTACAGGTGCACACAACTATGCCCAGTTCACCCAGCGCATTCCCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp CAGGTTTGGGGCAACCAAACTCTTAAGTACAATCACTaGCCATCACCTGACAGGAAGGATGGAAGGGGAAGC +
Preference number: 3 (lower is better)
Translates to: QVWGNQTLKYNH*PSPDRKDGRGS
Trigger: GCTTCCCCTTCCATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCAAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp TGTTTCTCTGTGCTGCTGAAGGCCGTTCACGGGACTTaGGGTCTGATTTTCTGGATGCCAACTCTTTTCCTC +
Preference number: 3 (lower is better)
Translates to: CFSVLLKAVHGT*GLIFWMPTLFL
Trigger: GAGGAAAAGAGTTGGCATCCAGAAAATCAGACCCCAAGTCCCGTGAACGGCCTTCAGCAGCACAGAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp TACAGAGTCCTGAAGCTGGAAGACCCTTCTCTGCACTaGGAAGATGAGCGTGTCTTTGTAGCTCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: YRVLKLEDPSLH*EDERVFVAHLS
Trigger: GGAAAGGTGAGCTACAAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTCTTCCAGCTTCAGGACTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp CAGTTCCTACGATTTCTGTCTTTCCTGATTCAGAGGTaGCCTGGTGACAGGAGCCTTGTGAGTACTGGTCAC +
Preference number: 3 (lower is better)
Translates to: QFLRFLSFLIQR*PGDRSLVSTGH
Trigger: GTGACCAGTACTCACAAGGCTCCTGTCACCAGGCCACCTCTGAATCAGGAAAGACAGAAATCGTAGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp ATTCTTTCAAACCTATCCAGAGTGATTATTGCACAGTaGGGCCCACGGACAGAGACTTGCAAGGCGAGGGCT +
Preference number: 3 (lower is better)
Translates to: ILSNLSRVIIAQ*GPRTETCKARA
Trigger: AGCCCTCGCCTTGCAAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCACTCTGGATAGGTTTGAAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp TCTAAAGACCAGGCTCCTGTCGGGTTTAGCTGCTGCTaGACTTGTGGGCTTCAGGGATACTCCATGTTTGAT +
Preference number: 3 (lower is better)
Translates to: SKDQAPVGFSCC*TCGLQGYSMFD
Trigger: ATCAAACATGGAGTATCCCTGAAGCCCACAAGTTCAGCAGCAGCTAAACCCGACAGGAGCCTGGTCTTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp TATATTTTAGCTAGGGCCACTTCCCAAACTTCCACATaGGAGAGTCGTTGGGCCACACCACTGCCTTTGCAT +
Preference number: 3 (lower is better)
Translates to: YILARATSQTST*ESRWATPLPLH
Trigger: ATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGAAGTTTGGGAAGTGGCCCTAGCTAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CAA 90 bp GCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAAGCATCTGACCGTGGCTGGCTCTTGTCCTGCTGTTaGCAAGGCAGTTTATTATAT +
Preference number: 3 (lower is better)
Translates to: ASSQFSVSQTLKASDRGWLLSCC*QGSLLY
Trigger: ATATAATAAACTGCCTTGCAAACAGCAGGACAAGAG...CCAGCCACGGTCAGATGCTTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp CCTTTCCTCAGAGCTTCCAAACTGACAACTTCTTCATaGAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCC +
Preference number: 3 (lower is better)
Translates to: PFLRASKLTTSS*SSRSSASQRQP
Trigger: GGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTCATGAAGAAGTTGTCAGTTTGGAAGCTCTGAGGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp GAAACACTTGGTTGGCTCTCAGCTCCTATCTCTGACTaGCAGGTAACATGCTCAGGTGACTCTTCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: ETLGWLSAPISD*QVTCSGDSSEA
Trigger: AGCTTCAGAAGAGTCACCTGAGCATGTTACCTGTCAGTCAGAGATAGGAGCTGAGAGCCAACCAAGTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp TACAAGAAAATCCTTTGGTGCATAAATGGAGACCACTaGTGGAGGAAAGCAGTCACCACAGAACGCCCTGAC +
Preference number: 3 (lower is better)
Translates to: YKKILWCINGDH*WRKAVTTERPD
Trigger: GTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp GTAGTTGTGAGAGTTAAACTAGCGTCCTGTCTTGTGTaGAGATACACTCTGAGGCCCTGGGTTCCTTTCTCA +
Preference number: 3 (lower is better)
Translates to: VVVRVKLASCLV*RYTLRPWVPFS
Trigger: TGAGAAAGGAACCCAGGGCCTCAGAGTGTATCTCCACACAAGACAGGACGCTAGTTTAACTCTCACAACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp GCTTCAGACATGGCTCTAAGCTGGGTGACAGAATCCTaGGAGCAATTTCCTAGCGAATCACACAGACATCTT +
Preference number: 3 (lower is better)
Translates to: ASDMALSWVTES*EQFPSESHRHL
Trigger: AAGATGTCTGTGTGATTCGCTAGGAAATTGCTCCCAGGATTCTGTCACCCAGCTTAGAGCCATGTCTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp AAGAAAATCCTTTGGTGCATAAATGGAGACCACTGCTaGAGGAAAGCAGTCACCACAGAACGCCCTGACAGT +
Preference number: 3 (lower is better)
Translates to: KKILWCINGDHC*RKAVTTERPDS
Trigger: ACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp GATGAACAAAATTCTTCTGCTGATTCCACAGAGGGCTaGCCGTGGCCACTTAGAAGGGAAGAGGAATTGTCA +
Preference number: 3 (lower is better)
Translates to: DEQNSSADSTEG*PWPLRREEELS
Trigger: TGACAATTCCTCTTCCCTTCTAAGTGGCCACGGTCAGCCCTCTGTGGAATCAGCAGAAGAATTTTGTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp GCAGGTCACAGACACACTCATTTTAGTTGGCAGGTTTaGGGCAACCAAACTCTTAAGTACAATCACTGCCCA +
Preference number: 3 (lower is better)
Translates to: AGHRHTHFSWQV*GNQTLKYNHCP
Trigger: TGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCAAACCTGCCAACTAAAATGAGTGTGTCTGTGACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CAA 90 bp AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCACAGATTTTCTACACATaGTGTGTGTGTGTGTGTAGT +
Preference number: 3 (lower is better)
Translates to: SSTRFHANVNFPTPFPWSQIFYT*CVCVCS
Trigger: ACTACACACACACACACACAATGTGTAGAAAATCTG...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR TCA 72 bp TATTCCAGGAAAGGATTCTTTCAAACCTATCCAGAGTaGTTATTGCACAGTGGGGCCCACGGACAGAGACTT +
Preference number: 3 (lower is better)
Translates to: YSRKGFFQTYPE*LLHSGAHGQRL
Trigger: AAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCACTCTGGATAGGTTTGAAAGAATCCTTTCCTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp TCCATTGTAGACATGTCAACATTATCTTCTGGGAGCTaGAATTCCCGAGTCAAGATGGAATGTTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: SIVDMSTLSSGS*NSRVKMECSTG
Trigger: GCCTGTGGAACATTCCATCTTGACTCGGGAATTGCAGCTCCCAGAAGATAATGTTGACATGTCTACAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp CAGCTTGAGTGTGAGCTTTACAAGAAAATCCTTTGGTaGATAAATGGAGACCACTGCTGGAGGAAAGCAGTC +
Preference number: 3 (lower is better)
Translates to: QLECELYKKILW*INGDHCWRKAV
Trigger: GACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTCACACTCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR-3UTR CAA 90 bp GAAAGGATCATGGTACTCAGTGTGACTTGCCATCGTGTCACTGAAGTGAGTCTCGGCTCAACATTTTGCTaGCAGATTTTCTACACATTG +
Preference number: 3 (lower is better)
Translates to: ERIMVLSVTCHRVTEVSLGSTFC*QIFYTL
Trigger: CAATGTGTAGAAAATCTGCAAGCAAAATGTTGAGCC...GAGACTCACTTCAGTGACACGATGGCAAGTCACACTGAGTACCATGATCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp CTTTCTGCAGCTAGGCAGGCATTCTGCCTGCCGCTGTaGTATTATTTCCCTACATCCTTAACTGATTTTATT +
Preference number: 3 (lower is better)
Translates to: LSAARQAFCLPL*YYFPTSLTDFI
Trigger: AATAAAATCAGTTAAGGATGTAGGGAAATAATAGCACAGCGGCAGGCAGAATGCCTGCCTAGCTGCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp CTTCAGCTTGAGTGTGAGCTTTACAAGAAAATCCTTTaGTGCATAAATGGAGACCACTGCTGGAGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: LQLECELYKKIL*CINGDHCWRKA
Trigger: TGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTCACACTCAAGCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp AAGAGATCTGGATACAAATGCACTATTGGTTTCCCATaGAAGGTGCATGTAAGGGAGAGTCACTCAACACAA +
Preference number: 3 (lower is better)
Translates to: KRSGYKCTIGFP*KVHVRESHSTQ
Trigger: TTGTGTTGAGTGACTCTCCCTTACATGCACCTTGCATGGGAAACCAATAGTGCATTTGTATCCAGATCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp GTCTATTCTGCAGGTCACAGACACACTCATTTTAGTTaGCAGGTTTGGGGCAACCAAACTCTTAAGTACAAT +
Preference number: 3 (lower is better)
Translates to: VYSAGHRHTHFS*QVWGNQTLKYN
Trigger: ATTGTACTTAAGAGTTTGGTTGCCCCAAACCTGCCAACTAAAATGAGTGTGTCTGTGACCTGCAGAATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR GCA 72 bp TTCTTTAGTTGCTTTCTCAGACAGAGCTATGTAAGATaGACTCATGTTCTATGCCTTATGATCTGGGGTTCA +
Preference number: 3 (lower is better)
Translates to: FFSCFLRQSYVR*THVLCLMIWGS
Trigger: TGAACCCCAGATCATAAGGCATAGAACATGAGTGCATCTTACATAGCTCTGTCTGAGAAAGCAACTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp TTTGTTATCCATTGTAGACATGTCAACATTATCTTCTaGGAGCTGCAATTCCCGAGTCAAGATGGAATGTTC +
Preference number: 3 (lower is better)
Translates to: FVIHCRHVNIIF*ELQFPSQDGMF
Trigger: GAACATTCCATCTTGACTCGGGAATTGCAGCTCCCAGAAGATAATGTTGACATGTCTACAATGGATAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp TATGTAAGATGCACTCATGTTCTATGCCTTATGATCTaGGGTTCAAACTTTGCAGGTAAACAAACTCCCATG +
Preference number: 3 (lower is better)
Translates to: YVRCTHVLCLMI*GSNFAGKQTPM
Trigger: CATGGGAGTTTGTTTACCTGCAAAGTTTGAACCCCAGATCATAAGGCATAGAACATGAGTGCATCTTACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CCA 72 bp ACCATTTTTGGTATACAGGATGCAGAAACTCCTATCTaGGGAAACCTAATGTTTGAAGAAGGTAAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: TIFGIQDAETPI*GNLMFEEGKSE
Trigger: TTCACTCTTACCTTCTTCAAACATTAGGTTTCCCCAGATAGGAGTTTCTGCATCCTGTATACCAAAAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp GCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTGGGAGGGCTGGGGTGTCAGTTCTCGGCGGCGGGGATaGCGGACTCGAGCTCGCACA +
Preference number: 4 (lower is better)
Translates to: ASRLLAVSPDHWEGWGVSSRRRG*RTRART
Trigger: TGTGCGAGCTCGAGTCCGGCATCCCCGCCGCCGAGA...ACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp GCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTGGGAGGGCTGGGGTGTCAGTAGCGCGCGGAAGTTGTaGAGCTCGAAGTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: ASRLLAVSPDHWEGWGVSSARKL*SSKSAS
Trigger: CGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCT...ACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR TCA 90 bp AAGTACCGAGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTGCTCGCTGTCCAGGAGATGAGTGCTaGGCCTGGGTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KYRERGQGQKALPALARCPGDEC*AWVLGS
Trigger: GCTGCCCAGAACCCAGGCTCAGCACTCATCTCCTGG...ACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCTCGGTACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR TCA 90 bp GGTTGGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTGGTCAAGGAAGGTGGTCTGTaGGCCCGTGGTGCCAATCAC +
Preference number: 4 (lower is better)
Translates to: GWSNPLRGNPAPGQTLLVKEGGL*ARGANH
Trigger: GTGATTGGCACCACGGGCTCACAGACCACCTTCCTT...GACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR TCA 90 bp GGTTGGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTGGTCACCGTAAGAAGCCAGTaGCCTGTGGTTGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: GWSNPLRGNPAPGQTLLVTVRSQ*PVVVGE
Trigger: CTCACCGACAACCACAGGTCACTGGCTTCTTACGGT...GACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp GAAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGTGGAACACTCTCCTCAGGAAGGAAGGTaGTCTGTGAGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EAQGLLRHKDSPGPVEHSPQEGR*SVSPWC
Trigger: GCACCACGGGCTCACAGACCACCTTCCTTCCTGAGG...AGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 72 bp GAACGCCCTGACAGTGGTCTGGCCGAGGAGCTGCCCTaGCTGTTACAGTTGGGATCTGACAGGATCAACACT +
Preference number: 4 (lower is better)
Translates to: ERPDSGLAEELP*LLQLGSDRINT
Trigger: AGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp AGACGCCTCGACCCTGTCTCTAGTACACGCCAGTGTCTGTCTAAGCCATTATCTGCTCGGTCCTGCTGCTaGTCCACCAAGACCCTAGAG +
Preference number: 4 (lower is better)
Translates to: RRLDPVSSTRQCLSKPLSARSCC*STKTLE
Trigger: CTCTAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGC...AGATAATGGCTTAGACAGACACTGGCGTGTACTAGAGACAGGGTCGAGGCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp GAAAGGATCATGGTACTCAGTGTGACTTGCCATCGTGTCACTGAAGTGAGTCTCGCTGAGCCTGGGTTCTaGGCAGCTGGCGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: ERIMVLSVTCHRVTEVSLAEPGF*AAGAVG
Trigger: CCCAACAGCGCCAGCTGCCCAGAACCCAGGCTCAGC...GAGACTCACTTCAGTGACACGATGGCAAGTCACACTGAGTACCATGATCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 72 bp AGTGGTCTGGCCGAGGAGCTGCCCTTGCTGTTACAGTaGGGATCTGACAGGATCAACACTGGGTTCACACTG +
Preference number: 4 (lower is better)
Translates to: SGLAEELPLLLQ*GSDRINTGFTL
Trigger: CAGTGTGAACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp GAAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGTGGAACACTCTAGCAAGGACAACTCATaGGGGTTGGCCAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: EAQGLLRHKDSPGPVEHSSKDNS*GLASSM
Trigger: CATGCTGCTGGCCAACCCGCATGAGTTGTCCTTGCT...AGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 72 bp ATAGCTAGAGATTCAATGCTATTGGGGTCACCGGGCTaGATGGCGCAGACGGAAGCAGAAACAGAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: IARDSMLLGSPG*MAQTEAETERA
Trigger: CGCTCGCTCTGTTTCTGCTTCCGTCTGCGCCATCAAGCCCGGTGACCCCAATAGCATTGAATCTCTAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 72 bp GGATTATCTGAAGCGAGATGTGCTACACTAGGGCTCTaGATGACGGCATCCTGCCTGCCTGTTGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GLSEARCATLGL*MTASCLPVELH
Trigger: GTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAAGAGCCCTAGTGTAGCACATCTCGCTTCAGATAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 72 bp TCCACATGGGAGAGTCGTTGGGCCACACCACTGCCTTaGCATGCCAATTTCGTCTGCTCACAAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: STWESRWATPLP*HANFVCSQRPS
Trigger: AGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR TCA 90 bp AGACGCCTCGACCCTGTCTCTAGTACACGCCAGTGTCTGTCTAAGCCATTATCTCATTTCCCCAGGAGATaGGTGCTGAGCCTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RRLDPVSSTRQCLSKPLSHFPRR*VLSLGS
Trigger: AGAACCCAGGCTCAGCACTCATCTCCTGGGGAAATG...AGATAATGGCTTAGACAGACACTGGCGTGTACTAGAGACAGGGTCGAGGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp ACGTCGGGATTCCTGAGAGCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAAACAACTCATGCGGGTTaGCCAGCAGCATGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: TSGFLRASSQFSVSQTLKTTHAG*PAACLG
Trigger: TCCGAGACATGCTGCTGGCCAACCCGCATGAGTTGT...TTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGCTCTCAGGAATCCCGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 72 bp TTATGGCGACAGAACAGCTCTTCCTGGCTGACTCTGTaGATCTGCGGACATCTTCTCGGTCAGGTGACAAGC +
Preference number: 4 (lower is better)
Translates to: LWRQNSSSWLTL*ICGHLLGQVTS
Trigger: GCTTGTCACCTGACCGAGAAGATGTCCGCAGATCAACAGAGTCAGCCAGGAAGAGCTGTTCTGTCGCCATAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp CCCATGGTCATGAAGGTATTTGGCAATCAGTCCATGCAGCAACCTATGATGTACCCGCCAAGGGTGGGTTaGGCTCCTTCAGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: PMVMKVFGNQSMQQPMMYPPRVG*APSART
Trigger: TGTCCTTGCTGAAGGAGCGCAACCCACCCTTGGCGG...GTACATCATAGGTTGCTGCATGGACTGATTGCCAAATACCTTCATGACCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp GGATGCCAACTCTTTTCCTCCGCAAATATCTGTGGCTCCCGCATCCCAGTAGTTCTACTCCTTTGGCAATaGCAGCCCACCGACGATCTA +
Preference number: 4 (lower is better)
Translates to: GCQLFSSANICGSRIPVVLLLWQ*QPTDDL
Trigger: TAGATCGTCGGTGGGCTGGCATTGCCAAAGGAGTAG...AACTACTGGGATGCGGGAGCCACAGATATTTGCGGAGGAAAAGAGTTGGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp CCCATGGTCATGAAGGTATTTGGCAATCAGTCCATGCAGCAACCTATGATGTACAAGTCGGCGTCGACCTaGAGGGAAAAGGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: PMVMKVFGNQSMQQPMMYKSAST*REKVTS
Trigger: CGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTT...GTACATCATAGGTTGCTGCATGGACTGATTGCCAAATACCTTCATGACCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR TCA 90 bp TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATACCTGTGGTTGTCGGTaGGAGGCCTTTCTGCATAGA +
Preference number: 4 (lower is better)
Translates to: WGNQTLKYNHCPSPDRKDTCGCR*EAFLHR
Trigger: TCTATGCAGAAAGGCCTCTCACCGACAACCACAGGT...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 72 bp CACATCTGGAAGCGGCCGTATCTCCAGCCCTTCAGCTaGAGTGTGAGCTTTACAAGAAAATCCTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: HIWKRPYLQPFS*SVSFTRKSFGA
Trigger: TGCACCAAAGGATTTTCTTGTAAAGCTCACACTCAAGCTGAAGGGCTGGAGATACGGCCGCTTCCAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp GCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAACAGGGCAGACACTGCTaGTCTCCGGCCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ACRFSTHCVCVCVVYLCEQGRHC*SPACLG
Trigger: GCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTG...TTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
3UTR CAA 72 bp GGAAAGAAAGGGATGAAGACTGCACCAAGGCCACTGTaGTCAGAACTTCCATTGTATTTCCACCGCCATGAG +
Preference number: 4 (lower is better)
Translates to: GKKGMKTAPRPL*SELPLYFHRHE
Trigger: CTCATGGCGGTGGAAATACAATGGAAGTTCTGACAACAGTGGCCTTGGTGCAGTCTTCATCCCTTTCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp ACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCTTTTTCAAACTCCGGGCTCGGTCCTaGTGCTGCTCCACCAAGACC +
Preference number: 4 (lower is better)
Translates to: THCVCVCVVYLCEKGFFKLRARS*CCSTKT
Trigger: GGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAG...TTTGAAAAAGCCCTTTTCACACAAATATACTACACACACACACACACAATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp CACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCGGCAGCTGGCGCTGTTaGGGGTTTGACGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HKTICFIPEYIIVMRIKSGSWRC*GFDVPG
Trigger: GCCTGGCACGTCAAACCCCCAACAGCGCCAGCTGCC...GCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp CAACATTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATCGGGCTCGGTCCTGCTaGTGCTCCACCAAGACCCTA +
Preference number: 4 (lower is better)
Translates to: QHFACRFSTHCVCVCVVYRARSC*CSTKTL
Trigger: TAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCG...ATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp AGACGCCTCGACCCTGTCTCTAGTACACGCCAGTGTCTGTCTAAGCCATTATCTTCCTCGATGTTCTGCTaGCTTATATCTTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: RRLDPVSSTRQCLSKPLSSSMFC*LISSSI
Trigger: GATAGAAGAAGATATAAGGCAGCAGAACATCGAGGA...AGATAATGGCTTAGACAGACACTGGCGTGTACTAGAGACAGGGTCGAGGCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCATTCCCACCAACTCGATaGAGAGCCCCGAGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: HENKKLCMHTLPIHLKGPFPPTR*RAPSAS
Trigger: GGAAGCGCTCGGGGCTCTGCATCGAGTTGGTGGGAA...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR TCA 90 bp CAACATTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATGCGCTGTTGGGGGTTTaGCGTGCCAGGCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: QHFACRFSTHCVCVCVVYALLGV*RARHSY
Trigger: ATAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGC...ATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp CGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCGGTCTCCGGCCTGTCTaGGCCTGGATTATGCACATG +
Preference number: 4 (lower is better)
Translates to: RHENKKLCMHTLPIHLKGGLRPV*AWIMHM
Trigger: CATGTGCATAATCCAGGCCCAGACAGGCCGGAGACC...GCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR GCA 90 bp AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCGGCATGGCTAGACTCTaGTCTGCTGAGGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RFSTHCVCVCVVYLCEKGGMARL*SAEEAR
Trigger: CCTTGCTTCCTCAGCAGAGCAGAGTCTAGCCATGCC...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp CACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCGTGTGCCTACTCCTTTaGCAATGCCAGCCCACCGAC +
Preference number: 4 (lower is better)
Translates to: HKTICFIPEYIIVMRIKSVCLLL*QCQPTD
Trigger: GTCGGTGGGCTGGCATTGCCAAAGGAGTAGGCACAC...GCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp CCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATCACAAAGACAGCCCTaGTCCTGTGGAACACTCTGC +
Preference number: 4 (lower is better)
Translates to: PEYIIVMRIKSFVCTHCQSQRQP*SCGTLC
Trigger: GCAGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGA...TTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp TTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGACTGTGTGGGAGGTTaGTCCAATCCACTACGGGGC +
Preference number: 4 (lower is better)
Translates to: FACRFSTHCVCVCVVYLCDCVGG*SNPLRG
Trigger: GCCCCGTAGTGGATTGGACCAACCTCCCACACAGTC...ACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp CAACATTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATGAAGAACGGAGGGGGTaGACAAGGACTGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QHFACRFSTHCVCVCVVYEERRG*TRTVWE
Trigger: CTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTC...ATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
3UTR CAA 72 bp CAGATTTCTCCAGATTACCTGCAACAACGGCTTCTTTaGATGACTTATGGAAAGGCATGGCTAGACTCTGCT +
Preference number: 4 (lower is better)
Translates to: QISPDYLQQRLL*MTYGKAWLDSA
Trigger: AGCAGAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGAAGCCGTTGTTGCAGGTAATCTGGAGAAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp TTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCTTTTTGATGACGGCATCCTaGCTGCCTGTTGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FSTHCVCVCVVYLCEKGFLMTAS*LPVELH
Trigger: GTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAA...AAAGCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR GCA 90 bp CCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAAGGCACCCTCACTTGCTaGAAGTTCAGGTGCTATTTC +
Preference number: 4 (lower is better)
Translates to: PEYIIVMRIKSFVCTHCQGTLTC*KFRCYF
Trigger: GAAATAGCACCTGAACTTGCAGCAAGTGAGGGTGCC...TTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR GCA 90 bp CGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCGTGGGCACCCTCACTTaGTGCAAGTTCAGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RHENKKLCMHTLPIHLKGVGTLT*CKFRCY
Trigger: ATAGCACCTGAACTTGCAGCAAGTGAGGGTGCCCAC...GCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp TTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGGCGTCCTGTCTTGTGTaGAGATACACTCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FCLQIFYTLCVCVCSIFVASCLV*RYTLRP
Trigger: GGGCCTCAGAGTGTATCTCCACACAAGACAGGACGC...CACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp CGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCTGGACAAGGACTGTGTaGGAGGTTGGTCCAATCCAC +
Preference number: 4 (lower is better)
Translates to: RHENKKLCMHTLPIHLKGWTRTV*EVGPIH
Trigger: GTGGATTGGACCAACCTCCCACACAGTCCTTGTCCA...GCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
3UTR CAA 72 bp CCACTTCCCACAATTATGTTGGGACTACAATGTTCTTaGCTAACAAAACAAGAAGGGCAAGGTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: PLPTIMLGLQCS*LTKQEGQGLHS
Trigger: GGAATGCAGACCTTGCCCTTCTTGTTTTGTTAGCAAAGAACATTGTAGTCCCAACATAATTGTGGGAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 72 bp AATGTTCAACCACTGAGCTACACAGGTATAATTCTTTaGGAGACAGGGTTTCATGTAACCCAAGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: NVQPLSYTGIIL*ETGFHVTQADL
Trigger: CAGGTCAGCTTGGGTTACATGAAACCCTGTCTCCAAAAGAATTATACCTGTGTAGCTCAGTGGTTGAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp TTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGCCGTTCACGGGACTTaGGGTCTGATTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: FACRFSTHCVCVCVVYLCAVHGT*GLIFWM
Trigger: CATCCAGAAAATCAGACCCCAAGTCCCGTGAACGGC...ACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCGACCCTTCTCTGCACTaGGAAGATGAGCGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: RFSTHCVCVCVVYLCEKGDPSLH*EDERVF
Trigger: AAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTC...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
3UTR CAA 72 bp AATGACGTGTGGCCTAGCCCACTTCCCACAATTATGTaGGGACTACAATGTTCTTTGCTAACAAAACAAGAA +
Preference number: 4 (lower is better)
Translates to: NDVWPSPLPTIM*GLQCSLLTKQE
Trigger: TTCTTGTTTTGTTAGCAAAGAACATTGTAGTCCCAACATAATTGTGGGAAGTGGGCTAGGCCACACGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR TCA 90 bp CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCATCTTCTATCTTTGCCTaGGCTTCGAGATCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: HENKKLCMHTLPIHLKGPSSIFA*ASRSKG
Trigger: CCCCTTTGATCTCGAAGCTCAGGCAAAGATAGAAGA...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR TCA 90 bp CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCACTGTTCTTCCAGAATTaGGAAGGAGCACGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HENKKLCMHTLPIHLKGPLFFQN*EGARQK
Trigger: TTTCTGGCGTGCTCCTTCTCAATTCTGGAAGAACAG...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp ACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCTTTTTCAAAAAGGCTTTCACAGGATaGCCGTTCACTCTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: THCVCVCVVYLCEKGFFKKAFTG*PFTLQL
Trigger: CAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTT...TTTGAAAAAGCCCTTTTCACACAAATATACTACACACACACACACACAATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR GCA 90 bp ATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATAAGAAGGGCAAGGTCTaGATTCCCACCAACTCGATG +
Preference number: 4 (lower is better)
Translates to: IHHRHENKKLCMHTLPIHKKGKV*IPTNSM
Trigger: CATCGAGTTGGTGGGAATGCAGACCTTGCCCTTCTT...ATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACGATGATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCCTTTCTGCACAGGCCTaGCTCATAATAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RFSTHCVCVCVVYLCEKGLSAQA*LIIVIW
Trigger: CCAGATGACTATTATGAGCCAGGCCTGTGCAGAAAG...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp TTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGCCTGAAGGAGCTGGATaGTCAAACCCATCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: FCLQIFYTLCVCVCSIFVPEGAG*SNPSEV
Trigger: GACTTCAGATGGGTTTGACCATCCAGCTCCTTCAGG...CACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp GCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAATTCCCGAGTCAAGATaGAATGTTCCACAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: ACRFSTHCVCVCVVYLCEIPESR*NVPQAH
Trigger: GTGAGCCTGTGGAACATTCCATCTTGACTCGGGAAT...TTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp CACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCCAGAACAGCTCTTCCTaGCTGACTCTGTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: HKTICFIPEYIIVMRIKSQNSSS*LTLLIC
Trigger: GCAGATCAACAGAGTCAGCCAGGAAGAGCTGTTCTG...GCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR GCA 90 bp GCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAATTATCTTCTGGGAGCTaGAATTCCCGAGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: ACRFSTHCVCVCVVYLCELSSGS*NSRVKM
Trigger: CATCTTGACTCGGGAATTGCAGCTCCCAGAAGATAA...TTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp TTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTACTTATGGAAAGGCATaGCTAGACTCTGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FACRFSTHCVCVCVVYLCTYGKA*LDSALL
Trigger: CAGCAGAGCAGAGTCTAGCCATGCCTTTCCATAAGT...ACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CCA 90 bp CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCAGTCAACATTATCTTCTaGGAGCTGCAATTCCCGAGT +
Preference number: 4 (lower is better)
Translates to: HENKKLCMHTLPIHLKGPVNIIF*ELQFPS
Trigger: ACTCGGGAATTGCAGCTCCCAGAAGATAATGTTGAC...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR GCA 90 bp CAAAGTACTCCTAAGAGCAACACCTGTATAATCACTGATTTATCAAACTGCTTCTATGTTACACCTTTCTaGACAGGCCTGGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: QSTPKSNTCIITDLSNCFYVTPF*TGLAHN
Trigger: ATTATGAGCCAGGCCTGTGCAGAAAGGTGTAACATA...GAAGCAGTTTGATAAATCAGTGATTATACAGGTGTTGCTCTTAGGAGTACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
3UTR CAA 72 bp CTAAACACTTTAAAGTGTAACTCTAGGCTTACAGTGTaGAATTCCATCATGGGCTTGATTTTTCCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LNTLKCNSRLTV*NSIMGLIFPPS
Trigger: ACTAGGGGGAAAAATCAAGCCCATGATGGAATTCAACACTGTAAGCCTAGAGTTACACTTTAAAGTGTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCACGGCTGATTTTTGAATaGCTTCTGCTAATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HENKKLCMHTLPIHLKGPRLIFE*LLLILG
Trigger: ACCAAGAATTAGCAGAAGCCATTCAAAAATCAGCCG...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CCA 90 bp ATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTCTTTTGATGACTTATaGAAAGGCATGGCTAGACTC +
Preference number: 4 (lower is better)
Translates to: IHHRHENKKLCMHTLPIHSFDDL*KGMARL
Trigger: GAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGA...ATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACGATGATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR GCA 90 bp TATGCTATACACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGAATCTTCTTCTATCTTTaGCTGAGCTTCGAGATCAAA +
Preference number: 4 (lower is better)
Translates to: YAIHKTICFIPEYIIVMRIFFYL*LSFEIK
Trigger: TTTGATCTCGAAGCTCAGGCAAAGATAGAAGAAGAT...TCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTGTATAGCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 90 bp GCGGCGGGGATGCCGGACTCGAGCTCGCACAGCGCGCGGAAGTTGTaGAGCTCGAAGTCGGCGTCGACCTGGAGGGAAAAGGTCACCTCG +
Preference number: 5 (lower is better)
Translates to: AAGMPDSSSHSARKL*SSKSASTWREKVTS
Trigger: CGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCATCCCCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CCA 90 bp CCAAGGGTGGGTTGCGCTCCTTCAGCAAGGACAACTCATGCGGGTTaGCCAGCAGCATGTCTCGGAGCAGGGCTGGGTTGTCTAGGCCTT +
Preference number: 5 (lower is better)
Translates to: PRVGCAPSARTTHAG*PAACLGAGLGCLGL
Trigger: AAGGCCTAGACAACCCAGCCCTGCTCCGAGACATGCTGCTGGCCAACCCGCATGAGTTGTCCTTGCTGAAGGAGCGCAACCCACCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CCA 90 bp GAGAAGATGCCATTTCCCCAGGAGATGAGTGCTGAGCCTGGGTTCTaGGCAGCTGGCGCTGTTGGGGGTTTGACGTGCCAGGCACAGCTA +
Preference number: 5 (lower is better)
Translates to: EKMPFPQEMSAEPGF*AAGAVGGLTCQAQL
Trigger: TAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGCCAGCTGCCCAGAACCCAGGCTCAGCACTCATCTCCTGGGGAAATGGCATCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS TCA 90 bp CTGAGTCGACAAAGGCTTTCACAGGATGCCCGTTCACTCTGCAGTTaGTGTACAGCATGGCGACCTGGCCGAAGCTCTCCGGGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LSRQRLSQDARSLCS*CTAWRPGRSSPGPP
Trigger: AGGAGGCCCCGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTGTCGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS TCA 90 bp GCTGGCGCTGTTGGGGGTTTGACGTGCCAGGCACAGCTATGCTACTaGAGTCAATCCGGGGTAAGTTTGAGAACTGCACTGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: AGAVGGLTCQAQLCY*SQSGVSLRTALQGE
Trigger: CTCGCCCTGCAGTGCAGTTCTCAAACTTACCCCGGATTGACTTCAGTAGCATAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CCA 90 bp ACAGGATGCCCGTTCACTCTGCAGTTGATGTACAGCATGGCGACCTaGCCGAAGCTCTCCGGGGCCTCCTCCATAGCTATCGTCATGTTC +
Preference number: 5 (lower is better)
Translates to: TGCPFTLQLMYSMAT*PKLSGASSIAIVMF
Trigger: GAACATGACGATAGCTATGGAGGAGGCCCCGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CAA 90 bp GAAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGTGGAACACTCTCAGACGAATCCGTTCTaGTTCTCTCCGGGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: EAQGLLRHKDSPGPVEHSQTNPF*FSPGSV
Trigger: GACCGAGCCCGGAGAGAACAAGAACGGATTCGTCTG...AGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CAA 90 bp AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAACCGTTCACTCTGCAGTaGATGTACAGCATGGCGACC +
Preference number: 5 (lower is better)
Translates to: SDTPDSSATGSNGNALGEPFTLQ*MYSMAT
Trigger: GGTCGCCATGCTGTACATCAACTGCAGAGTGAACGG...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS TCA 90 bp CACCATCTTTTAAACCGTAAGAAGCCAGTGACCTGTGGTTGTCGGTaGGAGGCCTTTCTGCATAGACAATCTGGCTCTCGGCGGCGGGGA +
Preference number: 5 (lower is better)
Translates to: HHLLNRKKPVTCGCR*EAFLHRQSGSRRRG
Trigger: TCCCCGCCGCCGAGAGCCAGATTGTCTATGCAGAAAGGCCTCTCACCGACAACCACAGGTCACTGGCTTCTTACGGTTTAAAAGATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 90 bp AACAGACGAATCCGTTCTTGTTCTCTCCGGGCTCGGTCCTGCTGCTaGTCCACCAAGACCCTAGAGAATTTCTCAAGATCTCCACTGAGC +
Preference number: 5 (lower is better)
Translates to: NRRIRSCSLRARSCC*STKTLENFSRSPLS
Trigger: GCTCAGTGGAGATCTTGAGAAATTCTCTAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGATTCGTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CAA 90 bp CTGAGGAAAGAAAGGGATGAAGACTGCACCAAGGCCACTGTTGTCAGAACTTCCTGTGTGCCTACTCCTTaGGCAATGCCAGCCCACCGA +
Preference number: 5 (lower is better)
Translates to: LRKERDEDCTKATVVRTSCVPTP*AMPAHR
Trigger: TCGGTGGGCTGGCATTGCCAAAGGAGTAGGCACACA...GGAAGTTCTGACAACAGTGGCCTTGGTGCAGTCTTCATCCCTTTCTTTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS TCA 90 bp CATGTCCAGACCCAGAAGCATGTCCATAGGCTGTTCTTCCAGAATTaGGAAGGAGCACGCCAGAAAATCGCCTTCAATCTGAACCTGAGC +
Preference number: 5 (lower is better)
Translates to: HVQTQKHVHRLFFQN*EGARQKIAFNLNLS
Trigger: GCTCAGGTTCAGATTGAAGGCGATTTTCTGGCGTGCTCCTTCTCAATTCTGGAAGAACAGCCTATGGACATGCTTCTGGGTCTGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CAA 90 bp AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCCACAGCGCGCGGAAGTaGTGCAGCTCGAAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: RFSTHCVCVCVVYLCEKGHSARK*CSSKSA
Trigger: CGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTG...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CAA 90 bp CAACATTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATGGCGCTGTTGGGGGTTaGACGTGCCAGGCACAGCTA +
Preference number: 5 (lower is better)
Translates to: QHFACRFSTHCVCVCVVYGAVGG*TCQAQL
Trigger: TAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGCC...ATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CAA 90 bp AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCGACAACTCATGCGGGTaGGCCAGCAGCATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: RFSTHCVCVCVVYLCEKGDNSCG*ASSMSR
Trigger: CCGAGACATGCTGCTGGCCAACCCGCATGAGTTGTC...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CAA 90 bp GCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAGGACTGTGTGGGAGGTaGGTCCAATCCACTACGGGG +
Preference number: 5 (lower is better)
Translates to: ACRFSTHCVCVCVVYLCEGLCGR*VQSTTG
Trigger: CCCCGTAGTGGATTGGACCAACCTCCCACACAGTCC...TTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS TCA 90 bp TTCTCCTCGATGTTCTGCTGCCTTATATCTTCTTCTATCTTTGCCTaGGCTTCGAGATCAAAGGGGTCAGCAGAAAACAGACGAATCCGT +
Preference number: 5 (lower is better)
Translates to: FSSMFCCLISSSIFA*ASRSKGSAENRRIR
Trigger: ACGGATTCGTCTGTTTTCTGCTGACCCCTTTGATCTCGAAGCTCAGGCAAAGATAGAAGAAGATATAAGGCAGCAGAACATCGAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CAA 90 bp CGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCGCCAGTGACCTGTGGTaGTCGGTGAGAGGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: RHENKKLCMHTLPIHLKGASDLW*SVRGLS
Trigger: AGAAAGGCCTCTCACCGACAACCACAGGTCACTGGC...GCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 90 bp CATGTTCTCCTCGATGTTCTGCTGCCTTATATCTTCTTCTATCTTTaGCTGAGCTTCGAGATCAAAGGGGTCAGCAGAAAACAGACGAAT +
Preference number: 5 (lower is better)
Translates to: HVLLDVLLPYIFFYL*LSFEIKGVSRKQTN
Trigger: ATTCGTCTGTTTTCTGCTGACCCCTTTGATCTCGAAGCTCAGGCAAAGATAGAAGAAGATATAAGGCAGCAGAACATCGAGGAGAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS-3UTR CAA 90 bp CTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACTCCTGGCTGACTCTGTaGATCTGCGGACATCTTCTC +
Preference number: 5 (lower is better)
Translates to: LLYSRIHHRHENKKLCMHSWLTL*ICGHLL
Trigger: GAGAAGATGTCCGCAGATCAACAGAGTCAGCCAGGA...GTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS-3UTR CAA 90 bp AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCAGAAGGGAAGAGGAATaGTCATCTTTGTTATCCATT +
Preference number: 5 (lower is better)
Translates to: RFSTHCVCVCVVYLCEKGRREEE*SSLLSI
Trigger: AATGGATAACAAAGATGACAATTCCTCTTCCCTTCT...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177592.2
CDS CAA 90 bp TCGGCGGCGGGGATGCCGGACTCGAGCTCGCACAGCGCGCGGAAGTaGTGCAGCTCGAAGTCGGCGTCGACCTGGAGGGAAAAGGTCACC +
Preference number: 6 (lower is better)
Translates to: SAAGMPDSSSHSARK*CSSKSASTWREKVT
Trigger: GGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCATCCCCGCCGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CAA 72 bp GGGATGCCGGACTCGAGCTCGCACAGCGCGCGGAAGTaGTGCAGCTCGAAGTCGGCGTCGACCTGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: GMPDSSSHSARK*CSSKSASTWRE
Trigger: TTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 72 bp ATGCCGGACTCGAGCTCGCACAGCGCGCGGAAGTTGTaGAGCTCGAAGTCGGCGTCGACCTGGAGGGAAAAG +
Preference number: 6 (lower is better)
Translates to: MPDSSSHSARKL*SSKSASTWREK
Trigger: CTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 72 bp TTTCTGCATAGACAATCTGGCTCTCGGCGGCGGGGATaGCGGACTCGAGCTCGCACAGCGCGCGGAAGTTGT +
Preference number: 6 (lower is better)
Translates to: FLHRQSGSRRRG*RTRARTARGSC
Trigger: ACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCATCCCCGCCGCCGAGAGCCAGATTGTCTATGCAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CCA 72 bp CCATTTCCCCAGGAGATGAGTGCTGAGCCTGGGTTCTaGGCAGCTGGCGCTGTTGGGGGTTTGACGTGCCAG +
Preference number: 6 (lower is better)
Translates to: PFPQEMSAEPGF*AAGAVGGLTCQ
Trigger: CTGGCACGTCAAACCCCCAACAGCGCCAGCTGCCCAGAACCCAGGCTCAGCACTCATCTCCTGGGGAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 72 bp AAGGGTGGGTTGCGCTCCTTCAGCAAGGACAACTCATaGGGGTTGGCCAGCAGCATGTCTCGGAGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: KGGLRSFSKDNS*GLASSMSRSRA
Trigger: AGCCCTGCTCCGAGACATGCTGCTGGCCAACCCGCATGAGTTGTCCTTGCTGAAGGAGCGCAACCCACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CCA 72 bp GGTTGCGCTCCTTCAGCAAGGACAACTCATGCGGGTTaGCCAGCAGCATGTCTCGGAGCAGGGCTGGGTTGT +
Preference number: 6 (lower is better)
Translates to: GCAPSARTTHAG*PAACLGAGLGC
Trigger: ACAACCCAGCCCTGCTCCGAGACATGCTGCTGGCCAACCCGCATGAGTTGTCCTTGCTGAAGGAGCGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CAA 90 bp CCTGAGTCGACAAAGGCTTTCACAGGATGCCCGTTCACTCTGCAGTaGATGTACAGCATGGCGACCTGGCCGAAGCTCTCCGGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: PESTKAFTGCPFTLQ*MYSMATWPKLSGAS
Trigger: GGAGGCCCCGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTGTCGACTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CCA 72 bp CCGTTCACTCTGCAGTTGATGTACAGCATGGCGACCTaGCCGAAGCTCTCCGGGGCCTCCTCCATAGCTATC +
Preference number: 6 (lower is better)
Translates to: PFTLQLMYSMAT*PKLSGASSIAI
Trigger: GATAGCTATGGAGGAGGCCCCGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS TCA 72 bp AGCCTGGGTTCTGGGCAGCTGGCGCTGTTGGGGGTTTaGCGTGCCAGGCACAGCTATGCTACTGAAGTCAAT +
Preference number: 6 (lower is better)
Translates to: SLGSGQLALLGV*RARHSYATEVN
Trigger: ATTGACTTCAGTAGCATAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGCCAGCTGCCCAGAACCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS TCA 72 bp CAAAGGCTTTCACAGGATGCCCGTTCACTCTGCAGTTaGTGTACAGCATGGCGACCTGGCCGAAGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: QRLSQDARSLCS*CTAWRPGRSSP
Trigger: CGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CAA 90 bp AGCTTCGAGATCAAAGGGGTCAGCAGAAAACAGACGAATCCGTTCTaGTTCTCTCCGGGCTCGGTCCTGCTGCTGCTCCACCAAGACCCT +
Preference number: 6 (lower is better)
Translates to: SFEIKGVSRKQTNPF*FSPGSVLLLLHQDP
Trigger: AGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGATTCGTCTGTTTTCTGCTGACCCCTTTGATCTCGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CAA 72 bp ATCAAAGGGGTCAGCAGAAAACAGACGAATCCGTTCTaGTTCTCTCCGGGCTCGGTCCTGCTGCTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: IKGVSRKQTNPF*FSPGSVLLLLH
Trigger: GTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGATTCGTCTGTTTTCTGCTGACCCCTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CAA 72 bp ACAAAGGCTTTCACAGGATGCCCGTTCACTCTGCAGTaGATGTACAGCATGGCGACCTGGCCGAAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: TKAFTGCPFTLQ*MYSMATWPKLS
Trigger: GGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 72 bp AGACGAATCCGTTCTTGTTCTCTCCGGGCTCGGTCCTaGTGCTGCTCCACCAAGACCCTAGAGAATTTCTCA +
Preference number: 6 (lower is better)
Translates to: RRIRSCSLRARS*CCSTKTLENFS
Trigger: TGAGAAATTCTCTAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGATTCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 72 bp ATCTGGGCTCCTGAGTCGACAAAGGCTTTCACAGGATaGCCGTTCACTCTGCAGTTGATGTACAGCATGGCG +
Preference number: 6 (lower is better)
Translates to: IWAPESTKAFTG*PFTLQLMYSMA
Trigger: CGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTGTCGACTCAGGAGCCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS TCA 72 bp GTTGGGGGTTTGACGTGCCAGGCACAGCTATGCTACTaGAGTCAATCCGGGGTAAGTTTGAGAACTGCACTG +
Preference number: 6 (lower is better)
Translates to: VGGLTCQAQLCY*SQSGVSLRTAL
Trigger: CAGTGCAGTTCTCAAACTTACCCCGGATTGACTTCAGTAGCATAGCTGTGCCTGGCACGTCAAACCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 72 bp ATCCGTTCTTGTTCTCTCCGGGCTCGGTCCTGCTGCTaGTCCACCAAGACCCTAGAGAATTTCTCAAGATCT +
Preference number: 6 (lower is better)
Translates to: IRSCSLRARSCC*STKTLENFSRS
Trigger: AGATCTTGAGAAATTCTCTAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS TCA 72 bp TTAAACCGTAAGAAGCCAGTGACCTGTGGTTGTCGGTaGGAGGCCTTTCTGCATAGACAATCTGGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: LNRKKPVTCGCR*EAFLHRQSGSR
Trigger: CCGAGAGCCAGATTGTCTATGCAGAAAGGCCTCTCACCGACAACCACAGGTCACTGGCTTCTTACGGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 72 bp ATGCTACTGAAGTCAATCCGGGGTAAGTTTGAGAACTaGACTGCAGGGCGAGGGTCTGCATTCTCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: MLLKSIRGKFEN*TAGRGSAFSFC
Trigger: ACAGAAGGAGAATGCAGACCCTCGCCCTGCAGTGCAGTTCTCAAACTTACCCCGGATTGACTTCAGTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS TCA 72 bp ACCCAGAAGCATGTCCATAGGCTGTTCTTCCAGAATTaGGAAGGAGCACGCCAGAAAATCGCCTTCAATCTG +
Preference number: 6 (lower is better)
Translates to: TQKHVHRLFFQN*EGARQKIAFNL
Trigger: CAGATTGAAGGCGATTTTCTGGCGTGCTCCTTCTCAATTCTGGAAGAACAGCCTATGGACATGCTTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS CCA 72 bp GCTTCTGACGCTCTGCATCCTCGGCTGATTTTTGAATaGCTTCTGCTAATTCTTGGTCTGCAATTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: ASDALHPRLIFE*LLLILGLQFPL
Trigger: CAGAGGAAATTGCAGACCAAGAATTAGCAGAAGCCATTCAAAAATCAGCCGAGGATGCAGAGCGTCAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5
CDS GCA 72 bp CTCGATGTTCTGCTGCCTTATATCTTCTTCTATCTTTaGCTGAGCTTCGAGATCAAAGGGGTCAGCAGAAAA +
Preference number: 6 (lower is better)
Translates to: LDVLLPYIFFYL*LSFEIKGVSRK
Trigger: TTTTCTGCTGACCCCTTTGATCTCGAAGCTCAGGCAAAGATAGAAGAAGATATAAGGCAGCAGAACATCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102484.5