Pregenerated sensors for DDI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078515Ensembl transcript IDs: ENSMUST00000102484.5, ENSMUST00000177592.2
Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTaGTCTCCGGCCTGTCTGGGCCTGGATTATGCACATGCTCTGAAG | + |
Preference number: 1 (lower is better) Translates to: GPIHYGATQLQGRHC*SPACLGLDYAHALK Trigger: CTTCAGAGCATGTGCATAATCCAGGCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | AACGGTGGAAGAACGGAGGGGGTGGACAAGGACTGTGTGGGAGGTTaGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTG | + |
Preference number: 1 (lower is better) Translates to: NGGRTEGVDKDCVGG*SNPLRGNPAPGQTL Trigger: CAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | ATACAAGCTCACCACACCTGGCTTCTGCAGTGCTGGGGGTTGGACTaGGGGCTTTCTGCAGCTAGGCAGGCATTCTGCCTGCCGCTGTGC | + |
Preference number: 1 (lower is better) Translates to: IQAHHTWLLQCWGLD*GLSAARQAFCLPLC Trigger: GCACAGCGGCAGGCAGAATGCCTGCCTAGCTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTGAGCTTGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | TGGGAATACAAGCTCACCACACCTGGCTTCTGCAGTGCTGGGGGTTaGACTGAGGGCTTTCTGCAGCTAGGCAGGCATTCTGCCTGCCGC | + |
Preference number: 1 (lower is better) Translates to: WEYKLTTPGFCSAGG*TEGFLQLGRHSACR Trigger: GCGGCAGGCAGAATGCCTGCCTAGCTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTGAGCTTGTATTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | AAATGGAGACCACTGCTGGAGGAAAGCAGTCACCACAGAACGCCCTaGCAGTGGTCTGGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGG | + |
Preference number: 1 (lower is better) Translates to: KWRPLLEESSHHRTP*QWSGRGAALAVTVG Trigger: CCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | ACTGCTGGAGGAAAGCAGTCACCACAGAACGCCCTGACAGTGGTCTaGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGGATCTGACAGGA | + |
Preference number: 1 (lower is better) Translates to: TAGGKQSPQNALTVV*PRSCPCCYSWDLTG Trigger: TCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | GAAACAGAGCGAGCGAGACTCGTCGGGCTACCAACCTCAGGACTCTaGCCTGAAGGAGCTGGATGGTCAAACCCATCTGAAGTCGGCAAT | + |
Preference number: 1 (lower is better) Translates to: ETERARLVGLPTSGL*PEGAGWSNPSEVGN Trigger: ATTGCCGACTTCAGATGGGTTTGACCATCCAGCTCCTTCAGGGCAGAGTCCTGAGGTTGGTAGCCCGACGAGTCTCGCTCGCTCTGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | GACTCAGAACGTCACCCCCACCCCCAAGCCAACACCAGGCTTCACTaGACTTCCTGTTCTTGCTTCAGACATGGCTCTAAGCTGGGTGAC | + |
Preference number: 1 (lower is better) Translates to: DSERHPHPQANTRLH*TSCSCFRHGSKLGD Trigger: GTCACCCAGCTTAGAGCCATGTCTGAAGCAAGAACAGGAAGTGCAGTGAAGCCTGGTGTTGGCTTGGGGGTGGGGGTGACGTTCTGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | AAGCAGTCACCACAGAACGCCCTGACAGTGGTCTGGCCGAGGAGCTaGCCTTGCTGTTACAGTTGGGATCTGACAGGATCAACACTGGGT | + |
Preference number: 1 (lower is better) Translates to: KQSPQNALTVVWPRS*PCCYSWDLTGSTLG Trigger: ACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | CGCTTCCTGCAGAGTGAAGCCGGCACCAAGAATCCTGTCAACATCTaGAGCAGGAAAGATGAACGGTGGAAGAACGGAGGGGGTGGACAA | + |
Preference number: 1 (lower is better) Translates to: RFLQSEAGTKNPVNI*SRKDERWKNGGGGQ Trigger: TTGTCCACCCCCTCCGTTCTTCCACCGTTCATCTTTCCTGCTGCAGATGTTGACAGGATTCTTGGTGCCGGCTTCACTCTGCAGGAAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | CCCAAACTTCCACATGGGAGAGTCGTTGGGCCACACCACTGCCTTTaGATGCCAATTTCGTCTGCTCACAAAGGCCTTCTGGGAGGAGTC | + |
Preference number: 1 (lower is better) Translates to: PKLPHGRVVGPHHCL*MPISSAHKGLLGGV Trigger: GACTCCTCCCAGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGAAGTTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | CTCGTCGGGCTACCAACCTCAGGACTCTGCCCTGAAGGAGCTGGATaGTCAAACCCATCTGAAGTCGGCAATGATGACATTCCCAGTGAG | + |
Preference number: 1 (lower is better) Translates to: LVGLPTSGLCPEGAG*SNPSEVGNDDIPSE Trigger: CTCACTGGGAATGTCATCATTGCCGACTTCAGATGGGTTTGACCATCCAGCTCCTTCAGGGCAGAGTCCTGAGGTTGGTAGCCCGACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | GGCACCAAGAATCCTGTCAACATCTGCAGCAGGAAAGATGAACGGTaGAAGAACGGAGGGGGTGGACAAGGACTGTGTGGGAGGTTGGTC | + |
Preference number: 1 (lower is better) Translates to: GTKNPVNICSRKDER*KNGGGGQGLCGRLV Trigger: GACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGTTCATCTTTCCTGCTGCAGATGTTGACAGGATTCTTGGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | TCGCAGTTCTCAGTCTCCCAGACTCTCAAAGCATCTGACCGTGGCTaGGAGGGCCACTGGCAAGCAGGTTTTGCTAACCAGACCAGATCT | + |
Preference number: 1 (lower is better) Translates to: SQFSVSQTLKASDRG*EGHWQAGFANQTRS Trigger: AGATCTGGTCTGGTTAGCAAAACCTGCTTGCCAGTGGCCCTCCCAGCCACGGTCAGATGCTTTGAGAGTCTGGGAGACTGAGAACTGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | ACCAAGGCCACTGTTGTCAGAACTTCCATTGTATTTCCACCGCCATaGGGGGCGCTCACAAACAAGTACCGAGAGAGGGGCCAGGGACAA | + |
Preference number: 1 (lower is better) Translates to: TKATVVRTSIVFPPP*GALTNKYRERGQGQ Trigger: TTGTCCCTGGCCCCTCTCTCGGTACTTGTTTGTGAGCGCCCCTCATGGCGGTGGAAATACAATGGAAGTTCTGACAACAGTGGCCTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | CACTTCTGCTCTGGATTCTCCTTCACACACTGCAGAGGCCTTGGCTaGGTTCTGCTCTGGAGGGTGGAGCAGTCACCTATCTTAGAGCTG | + |
Preference number: 1 (lower is better) Translates to: HFCSGFSFTHCRGLG*VLLWRVEQSPILEL Trigger: CAGCTCTAAGATAGGTGACTGCTCCACCCTCCAGAGCAGAACTCAGCCAAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGAGCAGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | GAGAGTCGTTGGGCCACACCACTGCCTTTGCATGCCAATTTCGTCTaGTCACAAAGGCCTTCTGGGAGGAGTCTGCCATCAGTACTTTCT | + |
Preference number: 1 (lower is better) Translates to: ESRWATPLPLHANFV*SQRPSGRSLPSVLS Trigger: AGAAAGTACTGATGGCAGACTCCTCCCAGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | CAGTGGTCTGGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGGATCTaGCAGGATCAACACTGGGTTCACACTGATGTGATCTTACTCCTA | + |
Preference number: 1 (lower is better) Translates to: QWSGRGAALAVTVGI*QDQHWVHTDVILLL Trigger: TAGGAGTAAGATCACATCAGTGTGAACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | GCTGCAAGTTCAGGTGCTATTTCTACCCCTGAGGTGCAGGGCAACTaGTCAGACAGTTTAGCTGAGGTTATGGCGACAGAACAGCTCTTC | + |
Preference number: 1 (lower is better) Translates to: AASSGAISTPEVQGN*SDSLAEVMATEQLF Trigger: GAAGAGCTGTTCTGTCGCCATAACCTCAGCTAAACTGTCTGAGCAGTTGCCCTGCACCTCAGGGGTAGAAATAGCACCTGAACTTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | CAATCACTTCTGCTCTGGATTCTCCTTCACACACTGCAGAGGCCTTaGCTGAGTTCTGCTCTGGAGGGTGGAGCAGTCACCTATCTTAGA | + |
Preference number: 1 (lower is better) Translates to: QSLLLWILLHTLQRP*LSSALEGGAVTYLR Trigger: TCTAAGATAGGTGACTGCTCCACCCTCCAGAGCAGAACTCAGCCAAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGAGCAGAAGTGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | CTACAGAGTCCTGAAGCTGGAAGACCCTTCTCTGCACTGGGAAGATaGGCGTGTCTTTGTAGCTCACCTTTCCTCAGAGCTTCCAAACTG | + |
Preference number: 1 (lower is better) Translates to: LQSPEAGRPFSALGR*ACLCSSPFLRASKL Trigger: CAGTTTGGAAGCTCTGAGGAAAGGTGAGCTACAAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTCTTCCAGCTTCAGGACTCTGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | ATGTGCTACACTAGGGCTCTTGATGACGGCATCCTGCCTGCCTGTTaGGCTGCACATAGCAACCAGAGACTGTTCAGCTGTATCTACTTC | + |
Preference number: 1 (lower is better) Translates to: MCYTRALDDGILPAC*AAHSNQRLFSCIYF Trigger: GAAGTAGATACAGCTGAACAGTCTCTGGTTGCTATGTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAAGAGCCCTAGTGTAGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | CAGAGCTTCCAAACTGACAACTTCTTCATGAAGCTCAAGGTCTTCTaGGTCACAAAGACAGCCCTGGTCCTGTGGAACACTCTGCTGTCC | + |
Preference number: 1 (lower is better) Translates to: QSFQTDNFFMKLKVF*VTKTALVLWNTLLS Trigger: GGACAGCAGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTCATGAAGAAGTTGTCAGTTTGGAAGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | CTATCCAGAGTGATTATTGCACAGTGGGGCCCACGGACAGAGACTTaGAAGGCGAGGGCTTACACTAAAAAGGCCACAACAAACACAGCT | + |
Preference number: 1 (lower is better) Translates to: LSRVIIAQWGPRTET*KARAYTKKATTNTA Trigger: AGCTGTGTTTGTTGTGGCCTTTTTAGTGTAAGCCCTCGCCTTGCAAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCACTCTGGATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | ATGGACAGCTACAGAGTCCTGAAGCTGGAAGACCCTTCTCTGCACTaGGAAGATGAGCGTGTCTTTGTAGCTCACCTTTCCTCAGAGCTT | + |
Preference number: 1 (lower is better) Translates to: MDSYRVLKLEDPSLH*EDERVFVAHLSSEL Trigger: AAGCTCTGAGGAAAGGTGAGCTACAAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTCTTCCAGCTTCAGGACTCTGTAGCTGTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | ACCACTGCCTTTGCATGCCAATTTCGTCTGCTCACAAAGGCCTTCTaGGAGGAGTCTGCCATCAGTACTTTCTTTTATCCACCCCACCCT | + |
Preference number: 1 (lower is better) Translates to: TTAFACQFRLLTKAF*EESAISTFFYPPHP Trigger: AGGGTGGGGTGGATAAAAGAAAGTACTGATGGCAGACTCCTCCCAGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | ATTTTAGCTAGGGCCACTTCCCAAACTTCCACATGGGAGAGTCGTTaGGCCACACCACTGCCTTTGCATGCCAATTTCGTCTGCTCACAA | + |
Preference number: 1 (lower is better) Translates to: ILARATSQTSTWESR*ATPLPLHANFVCSQ Trigger: TTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGAAGTTTGGGAAGTGGCCCTAGCTAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | GAGCTTTACAAGAAAATCCTTTGGTGCATAAATGGAGACCACTGCTaGAGGAAAGCAGTCACCACAGAACGCCCTGACAGTGGTCTGGCC | + |
Preference number: 1 (lower is better) Translates to: ELYKKILWCINGDHC*RKAVTTERPDSGLA Trigger: GGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | TACACTCCCTGTTTCTCTGTGCTGCTGAAGGCCGTTCACGGGACTTaGGGTCTGATTTTCTGGATGCCAACTCTTTTCCTCCGCAAATAT | + |
Preference number: 1 (lower is better) Translates to: YTPCFSVLLKAVHGT*GLIFWMPTLFLRKY Trigger: ATATTTGCGGAGGAAAAGAGTTGGCATCCAGAAAATCAGACCCCAAGTCCCGTGAACGGCCTTCAGCAGCACAGAGAAACAGGGAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | CTGGTACTCTATATTTTAGCTAGGGCCACTTCCCAAACTTCCACATaGGAGAGTCGTTGGGCCACACCACTGCCTTTGCATGCCAATTTC | + |
Preference number: 1 (lower is better) Translates to: LVLYILARATSQTST*ESRWATPLPLHANF Trigger: GAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGAAGTTTGGGAAGTGGCCCTAGCTAAAATATAGAGTACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | TGTAGCTCACCTTTCCTCAGAGCTTCCAAACTGACAACTTCTTCATaGAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGT | + |
Preference number: 1 (lower is better) Translates to: CSSPFLRASKLTTSS*SSRSSASQRQPWSC Trigger: ACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTCATGAAGAAGTTGTCAGTTTGGAAGCTCTGAGGAAAGGTGAGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | GAAAGGTCTGAAACACTTGGTTGGCTCTCAGCTCCTATCTCTGACTaGCAGGTAACATGCTCAGGTGACTCTTCTGAAGCTGGCTTACAG | + |
Preference number: 1 (lower is better) Translates to: ERSETLGWLSAPISD*QVTCSGDSSEAGLQ Trigger: CTGTAAGCCAGCTTCAGAAGAGTCACCTGAGCATGTTACCTGTCAGTCAGAGATAGGAGCTGAGAGCCAACCAAGTGTTTCAGACCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | TGTGAGCTTTACAAGAAAATCCTTTGGTGCATAAATGGAGACCACTaGTGGAGGAAAGCAGTCACCACAGAACGCCCTGACAGTGGTCTG | + |
Preference number: 1 (lower is better) Translates to: CELYKKILWCINGDH*WRKAVTTERPDSGL Trigger: CAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | CGCATCCCAGTAGTTGTGAGAGTTAAACTAGCGTCCTGTCTTGTGTaGAGATACACTCTGAGGCCCTGGGTTCCTTTCTCAACAGATTTC | + |
Preference number: 1 (lower is better) Translates to: RIPVVVRVKLASCLV*RYTLRPWVPFSTDF Trigger: GAAATCTGTTGAGAAAGGAACCCAGGGCCTCAGAGTGTATCTCCACACAAGACAGGACGCTAGTTTAACTCTCACAACTACTGGGATGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | GATTACCTGCAACAACGGCTTCTTTTGATGACTTATGGAAAGGCATaGCTAGACTCTGCTCTGCTGAGGAAGCAAGGTCAGGAAGAACCT | + |
Preference number: 1 (lower is better) Translates to: DYLQQRLLLMTYGKA*LDSALLRKQGQEEP Trigger: AGGTTCTTCCTGACCTTGCTTCCTCAGCAGAGCAGAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGAAGCCGTTGTTGCAGGTAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | CCTGTTCTTGCTTCAGACATGGCTCTAAGCTGGGTGACAGAATCCTaGGAGCAATTTCCTAGCGAATCACACAGACATCTTTGGTGTAGA | + |
Preference number: 1 (lower is better) Translates to: PVLASDMALSWVTES*EQFPSESHRHLWCR Trigger: TCTACACCAAAGATGTCTGTGTGATTCGCTAGGAAATTGCTCCCAGGATTCTGTCACCCAGCTTAGAGCCATGTCTGAAGCAAGAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | TCTCCAGCCCTTCAGCTTGAGTGTGAGCTTTACAAGAAAATCCTTTaGTGCATAAATGGAGACCACTGCTGGAGGAAAGCAGTCACCACA | + |
Preference number: 1 (lower is better) Translates to: SPALQLECELYKKIL*CINGDHCWRKAVTT Trigger: TGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTCACACTCAAGCTGAAGGGCTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | GATTTCTCCAGATTACCTGCAACAACGGCTTCTTTTGATGACTTATaGAAAGGCATGGCTAGACTCTGCTCTGCTGAGGAAGCAAGGTCA | + |
Preference number: 1 (lower is better) Translates to: DFSRLPATTASFDDL*KGMARLCSAEEARS Trigger: TGACCTTGCTTCCTCAGCAGAGCAGAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGAAGCCGTTGTTGCAGGTAATCTGGAGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | GGAACACAGGTCTATTCTGCAGGTCACAGACACACTCATTTTAGTTaGCAGGTTTGGGGCAACCAAACTCTTAAGTACAATCACTGCCCA | + |
Preference number: 1 (lower is better) Translates to: GTQVYSAGHRHTHFS*QVWGNQTLKYNHCP Trigger: TGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCAAACCTGCCAACTAAAATGAGTGTGTCTGTGACCTGCAGAATAGACCTGTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 90 bp | AACAGTTTATATTCCAGGAAAGGATTCTTTCAAACCTATCCAGAGTaGTTATTGCACAGTGGGGCCCACGGACAGAGACTTGCAAGGCGA | + |
Preference number: 1 (lower is better) Translates to: NSLYSRKGFFQTYPE*LLHSGAHGQRLARR Trigger: TCGCCTTGCAAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCACTCTGGATAGGTTTGAAAGAATCCTTTCCTGGAATATAAACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | GGTGACTCTTCTGAAGCTGGCTTACAGCTAATGACCAAAAGCTCATaGAGTTCTTTCAAGGCCACTGTGACAGATGAACAAAATTCTTCT | + |
Preference number: 1 (lower is better) Translates to: GDSSEAGLQLMTKSS*SSFKATVTDEQNSS Trigger: AGAAGAATTTTGTTCATCTGTCACAGTGGCCTTGAAAGAACTCCATGAGCTTTTGGTCATTAGCTGTAAGCCAGCTTCAGAAGAGTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | ATTGTCATCTTTGTTATCCATTGTAGACATGTCAACATTATCTTCTaGGAGCTGCAATTCCCGAGTCAAGATGGAATGTTCCACAGGCTC | + |
Preference number: 1 (lower is better) Translates to: IVIFVIHCRHVNIIF*ELQFPSQDGMFHRL Trigger: GAGCCTGTGGAACATTCCATCTTGACTCGGGAATTGCAGCTCCCAGAAGATAATGTTGACATGTCTACAATGGATAACAAAGATGACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | AGACAGAGCTATGTAAGATGCACTCATGTTCTATGCCTTATGATCTaGGGTTCAAACTTTGCAGGTAAACAAACTCCCATGTTGAGCCAT | + |
Preference number: 1 (lower is better) Translates to: RQSYVRCTHVLCLMI*GSNFAGKQTPMLSH Trigger: ATGGCTCAACATGGGAGTTTGTTTACCTGCAAAGTTTGAACCCCAGATCATAAGGCATAGAACATGAGTGCATCTTACATAGCTCTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 90 bp | CCAAATGCTATTGTGTTAACTACCGAGAGGGAAATTACACAGTTCTaGTCAGCCACAGACTTTATTAAATCCCAAGACTGGCTTTTACTT | + |
Preference number: 1 (lower is better) Translates to: PNAIVLTTEREITQF*SATDFIKSQDWLLL Trigger: AAGTAAAAGCCAGTCTTGGGATTTAATAAAGTCTGTGGCTGACCAGAACTGTGTAATTTCCCTCTCGGTAGTTAACACAATAGCATTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 90 bp | ATCAAAACCTTCTTTAGTTGCTTTCTCAGACAGAGCTATGTAAGATaGACTCATGTTCTATGCCTTATGATCTGGGGTTCAAACTTTGCA | + |
Preference number: 1 (lower is better) Translates to: IKTFFSCFLRQSYVR*THVLCLMIWGSNFA Trigger: TGCAAAGTTTGAACCCCAGATCATAAGGCATAGAACATGAGTGCATCTTACATAGCTCTGTCTGAGAAAGCAACTAAAGAAGGTTTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR GCA 90 bp | GCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTGGGAGGGCTGGGGTGTCAGTCGGGCCCACTCCAGCTaGAGCACACACACACTACAT | + |
Preference number: 2 (lower is better) Translates to: ASRLLAVSPDHWEGWGVSRAHSS*STHTLH Trigger: ATGTAGTGTGTGTGTGCTGCAGCTGGAGTGGGCCCG...ACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | GCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTGGGAGGGCTGGGGTGTCAGTGGTCTCCGGCCTGTCTaGGCCTGGATTATGCACATG | + |
Preference number: 2 (lower is better) Translates to: ASRLLAVSPDHWEGWGVSGLRPV*AWIMHM Trigger: CATGTGCATAATCCAGGCCCAGACAGGCCGGAGACC...ACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 90 bp | GAACGGTGGAAGAACGGAGGGGGTGGACAAGGACTGTGTGGGAGGTaGGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACT | + |
Preference number: 2 (lower is better) Translates to: ERWKNGGGGQGLCGR*VQSTTGQPSSRADT Trigger: AGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | GGTTGGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTGGTCACAGCTACAGAGTCCTaGAGCTGGAAGACCCTTCTC | + |
Preference number: 2 (lower is better) Translates to: GWSNPLRGNPAPGQTLLVTATES*SWKTLL Trigger: GAGAAGGGTCTTCCAGCTTCAGGACTCTGTAGCTGT...GACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | AAGTACCGAGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTGCTCGCTGTGACTGTGTGGGAGGTTaGTCCAATCCACTACGGGGC | + |
Preference number: 2 (lower is better) Translates to: KYRERGQGQKALPALARCDCVGG*SNPLRG Trigger: GCCCCGTAGTGGATTGGACCAACCTCCCACACAGTC...ACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCTCGGTACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | ACGTCGGGATTCCTGAGAGCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAACAGGGCAGACACTGCTaGTCTCCGGCCTGTCTGGGC | + |
Preference number: 2 (lower is better) Translates to: TSGFLRASSQFSVSQTLKQGRHC*SPACLG Trigger: GCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTG...TTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGCTCTCAGGAATCCCGACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 90 bp | GTCACCACAGAACGCCCTGACAGTGGTCTGGCCGAGGAGCTGCCCTaGCTGTTACAGTTGGGATCTGACAGGATCAACACTGGGTTCACA | + |
Preference number: 2 (lower is better) Translates to: VTTERPDSGLAEELP*LLQLGSDRINTGFT Trigger: TGTGAACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR GCA 90 bp | AAGTACCGAGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTGCTCGCTGTGTGGGCACCCTCACTTaGTGCAAGTTCAGGTGCTAT | + |
Preference number: 2 (lower is better) Translates to: KYRERGQGQKALPALARCVGTLT*CKFRCY Trigger: ATAGCACCTGAACTTGCAGCAAGTGAGGGTGCCCAC...ACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCTCGGTACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 90 bp | GTAGCCTCCATAGCTAGAGATTCAATGCTATTGGGGTCACCGGGCTaGATGGCGCAGACGGAAGCAGAAACAGAGCGAGCGAGACTCGTC | + |
Preference number: 2 (lower is better) Translates to: VASIARDSMLLGSPG*MAQTEAETERARLV Trigger: GACGAGTCTCGCTCGCTCTGTTTCTGCTTCCGTCTGCGCCATCAAGCCCGGTGACCCCAATAGCATTGAATCTCTAGCTATGGAGGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTGTTTCTCTGTGCTGCTaGAGGCCGTTCACGGGACTT | + |
Preference number: 2 (lower is better) Translates to: HQTIPLSPVALLVIHQTVVSLCC*RPFTGL Trigger: AAGTCCCGTGAACGGCCTTCAGCAGCACAGAGAAAC...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | AAGTACCGAGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTGCTCGCTGTCTCAGACAGTTTAGCTaGGGTTATGGCGACAGAACA | + |
Preference number: 2 (lower is better) Translates to: KYRERGQGQKALPALARCLRQFS*GYGDRT Trigger: TGTTCTGTCGCCATAACCTCAGCTAAACTGTCTGAG...ACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCTCGGTACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR GCA 90 bp | GCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAAGCATCTGACCGTGGCTGGATCCAGAGTGATTATTaGACAGTGGGGCCCACGGAC | + |
Preference number: 2 (lower is better) Translates to: ASSQFSVSQTLKASDRGWIQSDY*TVGPTD Trigger: GTCCGTGGGCCCCACTGTGCAATAATCACTCTGGAT...CCAGCCACGGTCAGATGCTTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAAGTGATTATTGCACAGTaGGGCCCACGGACAGAGACT | + |
Preference number: 2 (lower is better) Translates to: SDTPDSSATGSNGNALGEVIIAQ*GPRTET Trigger: AGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCAC...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 90 bp | TCAGCTGAAGCCTTCGTAGCCTCCATAGCTAGAGATTCAATGCTATaGGGGTCACCGGGCTTGATGGCGCAGACGGAAGCAGAAACAGAG | + |
Preference number: 2 (lower is better) Translates to: SAEAFVASIARDSML*GSPGLMAQTEAETE Trigger: CTCTGTTTCTGCTTCCGTCTGCGCCATCAAGCCCGGTGACCCCAATAGCATTGAATCTCTAGCTATGGAGGCTACGAAGGCTTCAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATGATCACTGGGAGGGCTaGGGTGTCAGTGAGACGCCT | + |
Preference number: 2 (lower is better) Translates to: WGNQTLKYNHCPSPDRKDDHWEG*GVSETP Trigger: AGGCGTCTCACTGACACCCCAGCCCTCCCAGTGATC...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTCTCACAAAGGCCTTCTaGGAGGAGTCTGCCATCAGT | + |
Preference number: 2 (lower is better) Translates to: HQTIPLSPVALLVIHQTVLTKAF*EESAIS Trigger: ACTGATGGCAGACTCCTCCCAGAAGGCCTTTGTGAG...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 90 bp | TCCATAGTGGGATTATCTGAAGCGAGATGTGCTACACTAGGGCTCTaGATGACGGCATCCTGCCTGCCTGTTGAGCTGCACATAGCAACC | + |
Preference number: 2 (lower is better) Translates to: SIVGLSEARCATLGL*MTASCLPVELHIAT Trigger: GGTTGCTATGTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAAGAGCCCTAGTGTAGCACATCTCGCTTCAGATAATCCCACTATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTGATTTCTGTCTTTCCTaGTTCAGAGGTGGCCTGGTG | + |
Preference number: 2 (lower is better) Translates to: HQTIPLSPVALLVIHQTVDFCLS*FRGGLV Trigger: CACCAGGCCACCTCTGAATCAGGAAAGACAGAAATC...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCAACATGCTCTGAAGGCTaGCTGTGGGCACCCTCACTT | + |
Preference number: 2 (lower is better) Translates to: SSTRFHANVNFPTPFPWSTCSEG*LWAPSL Trigger: AAGTGAGGGTGCCCACAGTCAGCCTTCAGAGCATGT...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTATGGCAGGTTCCTCATaGCTCCTGCTTTCAAAGCAC | + |
Preference number: 2 (lower is better) Translates to: HQTIPLSPVALLVIHQTVMAGSS*LLLSKH Trigger: GTGCTTTGAAAGCAGGAGTCATGAGGAACCTGCCAT...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCAGCGTCCTGTCTTGTGTaGAGATACACTCTGAGGCCC | + |
Preference number: 2 (lower is better) Translates to: SSTRFHANVNFPTPFPWSASCLV*RYTLRP Trigger: GGGCCTCAGAGTGTATCTCCACACAAGACAGGACGC...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | ACGTCGGGATTCCTGAGAGCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAATGGACAAGGACTGTGTaGGAGGTTGGTCCAATCCAC | + |
Preference number: 2 (lower is better) Translates to: TSGFLRASSQFSVSQTLKWTRTV*EVGPIH Trigger: GTGGATTGGACCAACCTCCCACACAGTCCTTGTCCA...TTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGCTCTCAGGAATCCCGACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 90 bp | AAAGGGATGAAGACTGCACCAAGGCCACTGTTGTCAGAACTTCCATaGTATTTCCACCGCCATGAGGGGCGCTCACAAACAAGTACCGAG | + |
Preference number: 2 (lower is better) Translates to: KGMKTAPRPLLSELP*YFHRHEGRSQTSTE Trigger: CTCGGTACTTGTTTGTGAGCGCCCCTCATGGCGGTGGAAATACAATGGAAGTTCTGACAACAGTGGCCTTGGTGCAGTCTTCATCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR GCA 90 bp | CACCAAACCATACCCCTCAGCCCTGTGGCACTGCTAGTGATACACCAGACAGTTAACACCAGGCTTCACTaGACTTCCTGTTCTTGCTTC | + |
Preference number: 2 (lower is better) Translates to: HQTIPLSPVALLVIHQTVNTRLH*TSCSCF Trigger: GAAGCAAGAACAGGAAGTGCAGTGAAGCCTGGTGTT...AACTGTCTGGTGTATCACTAGCAGTGCCACAGGGCTGAGGGGTATGGTTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCATCACAAAGACAGCCCTaGTCCTGTGGAACACTCTGC | + |
Preference number: 2 (lower is better) Translates to: SSTRFHANVNFPTPFPWSSQRQP*SCGTLC Trigger: GCAGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGA...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATATTATGCACATGCTCTaGAGGCTGACTGTGGGCACC | + |
Preference number: 2 (lower is better) Translates to: WGNQTLKYNHCPSPDRKDIMHML*RLTVGT Trigger: GGTGCCCACAGTCAGCCTTCAGAGCATGTGCATAAT...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | GGATGCCAACTCTTTTCCTCCGCAAATATCTGTGGCTCCCGCATCCCAGTAGTTACTTATGGAAAGGCATaGCTAGACTCTGCTCTGCTG | + |
Preference number: 2 (lower is better) Translates to: GCQLFSSANICGSRIPVVTYGKA*LDSALL Trigger: CAGCAGAGCAGAGTCTAGCCATGCCTTTCCATAAGT...AACTACTGGGATGCGGGAGCCACAGATATTTGCGGAGGAAAAGAGTTGGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCAGACCCTTCTCTGCACTaGGAAGATGAGCGTGTCTTT | + |
Preference number: 2 (lower is better) Translates to: SSTRFHANVNFPTPFPWSDPSLH*EDERVF Trigger: AAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTC...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAATCACACAGACATCTTTaGTGTAGAACAGGCAAAAGA | + |
Preference number: 2 (lower is better) Translates to: SDTPDSSATGSNGNALGESHRHL*CRTGKR Trigger: TCTTTTGCCTGTTCTACACCAAAGATGTCTGTGTGA...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | CACAGTTCTGGTCAGCCACAGACTTTATTAAATCCCAAGACTGGCTTTTACTTTCCTGATGGAGAGCTGTaGACCACAAGGCCATCCAGC | + |
Preference number: 2 (lower is better) Translates to: HSSGQPQTLLNPKTGFYFPDGEL*TTRPSS Trigger: GCTGGATGGCCTTGTGGTTCACAGCTCTCCATCAGG...AAAGTAAAAGCCAGTCTTGGGATTTAATAAAGTCTGTGGCTGACCAGAACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR GCA 90 bp | CCCATGGTCATGAAGGTATTTGGCAATCAGTCCATGCAGCAACCTATGATGTACAAGAAGGGCAAGGTCTaGATTCCCACCAACTCGATG | + |
Preference number: 2 (lower is better) Translates to: PMVMKVFGNQSMQQPMMYKKGKV*IPTNSM Trigger: CATCGAGTTGGTGGGAATGCAGACCTTGCCCTTCTT...GTACATCATAGGTTGCTGCATGGACTGATTGCCAAATACCTTCATGACCATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR GCA 90 bp | AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAATCTGGCTCAACATTTTaGTTGCAGATTTTCTACACA | + |
Preference number: 2 (lower is better) Translates to: SDTPDSSATGSNGNALGESGSTF*LQIFYT Trigger: TGTGTAGAAAATCTGCAAGCAAAATGTTGAGCCAGA...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR GCA 90 bp | TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATGTACTCAGTGTGACTTaGCATCGTGTCACTGAAGTG | + |
Preference number: 2 (lower is better) Translates to: WGNQTLKYNHCPSPDRKDVLSVT*HRVTEV Trigger: CACTTCAGTGACACGATGGCAAGTCACACTGAGTAC...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | GATCTGCGGACATCTTCTCGGTCAGGTGACAAGCCATCACCCAGACCTTCAAAGTCTTTTGATGACTTATaGAAAGGCATGGCTAGACTC | + |
Preference number: 2 (lower is better) Translates to: DLRTSSRSGDKPSPRPSKSFDDL*KGMARL Trigger: GAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGA...CTTTGAAGGTCTGGGTGATGGCTTGTCACCTGACCGAGAAGATGTCCGCAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | ACGTCGGGATTCCTGAGAGCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAATTCCCACAATTATGTTaGGACTACAATGTTCTTTGC | + |
Preference number: 2 (lower is better) Translates to: TSGFLRASSQFSVSQTLKFPQLC*DYNVLC Trigger: GCAAAGAACATTGTAGTCCCAACATAATTGTGGGAA...TTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGCTCTCAGGAATCCCGACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 90 bp | CGTCAGGCAAATGTTCAACCACTGAGCTACACAGGTATAATTCTTTaGGAGACAGGGTTTCATGTAACCCAAGCTGACCTGAAACTCACT | + |
Preference number: 2 (lower is better) Translates to: RQANVQPLSYTGIIL*ETGFHVTQADLKLT Trigger: AGTGAGTTTCAGGTCAGCTTGGGTTACATGAAACCCTGTCTCCAAAAGAATTATACCTGTGTAGCTCAGTGGTTGAACATTTGCCTGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | CTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACGAAGAACGGAGGGGGTaGACAAGGACTGTGTGGGAG | + |
Preference number: 2 (lower is better) Translates to: LLYSRIHHRHENKKLCMHEERRG*TRTVWE Trigger: CTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTC...GTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 90 bp | TTCAAAAGGAATGACGTGTGGCCTAGCCCACTTCCCACAATTATGTaGGGACTACAATGTTCTTTGCTAACAAAACAAGAAGGGCAAGGT | + |
Preference number: 2 (lower is better) Translates to: FKRNDVWPSPLPTIM*GLQCSLLTKQEGQG Trigger: ACCTTGCCCTTCTTGTTTTGTTAGCAAAGAACATTGTAGTCCCAACATAATTGTGGGAAGTGGGCTAGGCCACACGTCATTCCTTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR GCA 90 bp | CACAGTTCTGGTCAGCCACAGACTTTATTAAATCCCAAGACTGGCTTTTACTTTAAAAGCCACCAGACGTaGGGTCTCTGTAGACAGAAA | + |
Preference number: 2 (lower is better) Translates to: HSSGQPQTLLNPKTGFYFKSHQT*GLCRQK Trigger: TTTCTGTCTACAGAGACCGCACGTCTGGTGGCTTTT...AAAGTAAAAGCCAGTCTTGGGATTTAATAAAGTCTGTGGCTGACCAGAACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | TATGCTATACACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGATGTGGAGATACACTCTaGGGCCCTGGGTTCCTTTCT | + |
Preference number: 2 (lower is better) Translates to: YAIHKTICFIPEYIIVMRCGDTL*GPGFLS Trigger: AGAAAGGAACCCAGGGCCTCAGAGTGTATCTCCACA...TCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTGTATAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR GCA 90 bp | GAAAGGATCATGGTACTCAGTGTGACTTGCCATCGTGTCACTGAAGTGAGTCTCGCTCAACATTTTGCTTaGAGATTTTCTACACATTGT | + |
Preference number: 2 (lower is better) Translates to: ERIMVLSVTCHRVTEVSLAQHFA*RFSTHC Trigger: ACAATGTGTAGAAAATCTGCAAGCAAAATGTTGAGC...GAGACTCACTTCAGTGACACGATGGCAAGTCACACTGAGTACCATGATCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CCA 90 bp | CTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACCCTGAAGGAGCTGGATaGTCAAACCCATCTGAAGTC | + |
Preference number: 2 (lower is better) Translates to: LLYSRIHHRHENKKLCMHPEGAG*SNPSEV Trigger: GACTTCAGATGGGTTTGACCATCCAGCTCCTTCAGG...GTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR TCA 90 bp | TATGCTATACACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGACTGACAACTTCTTCATaGAGCTCAAGGTCTTCTGCG | + |
Preference number: 2 (lower is better) Translates to: YAIHKTICFIPEYIIVMRLTTSS*SSRSSA Trigger: CGCAGAAGACCTTGAGCTTCATGAAGAAGTTGTCAG...TCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTGTATAGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | ACAGCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTaGGAGGGCTGGGGTGTCAGTGAGACGCCTCGACCC | + |
Preference number: 3 (lower is better) Translates to: TASRLLAVSPDH*EGWGVSETPRP Trigger: GGGTCGAGGCGTCTCACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 72 bp | AAGGACCACACCAGGCGGCAGTCCTCTCAGGAGGGCTaGCCTCTAACCTCCCCCTCCCGTACTCCCAAGATG | + |
Preference number: 3 (lower is better) Translates to: KDHTRRQSSQEG*PLTSPSRTPKM Trigger: CATCTTGGGAGTACGGGAGGGGGAGGTTAGAGGGCAGCCCTCCTGAGAGGACTGCCGCCTGGTGTGGTCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 72 bp | ATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTaGTGGTCTCCGGCCTGTCTGGGCCTGGATTATGCA | + |
Preference number: 3 (lower is better) Translates to: IHYGATQLQGRH*WSPACLGLDYA Trigger: TGCATAATCCAGGCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 72 bp | CCCGACCCGTCGACATCTGAAGCTCAGCCCGCCAGATaGAGACATCGGCTGCTGCAGAGGGCTGAACTAGCA | + |
Preference number: 3 (lower is better) Translates to: PDPSTSEAQPAR*RHRLLQRAELA Trigger: TGCTAGTTCAGCCCTCTGCAGCAGCCGATGTCTGCATCTGGCGGGCTGAGCTTCAGATGTCGACGGGTCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | CACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTaGTCTCCGGCCTGTCTGGGCCTGGATTATGCACAT | + |
Preference number: 3 (lower is better) Translates to: HYGATQLQGRHC*SPACLGLDYAH Trigger: ATGTGCATAATCCAGGCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | AGAACGGAGGGGGTGGACAAGGACTGTGTGGGAGGTTaGTCCAATCCACTACGGGGCAACCCAGCTCCAGGG | + |
Preference number: 3 (lower is better) Translates to: RTEGVDKDCVGG*SNPLRGNPAPG Trigger: CCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 72 bp | CCACTGCTGGAGGAAAGCAGTCACCACAGAACGCCCTaGCAGTGGTCTGGCCGAGGAGCTGCCCTTGCTGTT | + |
Preference number: 3 (lower is better) Translates to: PLLEESSHHRTP*QWSGRGAALAV Trigger: AACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 72 bp | CACCACACCTGGCTTCTGCAGTGCTGGGGGTTGGACTaGGGGCTTTCTGCAGCTAGGCAGGCATTCTGCCTG | + |
Preference number: 3 (lower is better) Translates to: HHTWLLQCWGLD*GLSAARQAFCL Trigger: CAGGCAGAATGCCTGCCTAGCTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | ACGGTGGAAGAACGGAGGGGGTGGACAAGGACTGTGTaGGAGGTTGGTCCAATCCACTACGGGGCAACCCAG | + |
Preference number: 3 (lower is better) Translates to: TVEERRGWTRTV*EVGPIHYGATQ Trigger: CTGGGTTGCCCCGTAGTGGATTGGACCAACCTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | AGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTaGTCGCTGTCTCACTCAGCTCCGACTGAGCATGAG | + |
Preference number: 3 (lower is better) Translates to: REGPGTKGSPST*SLSHSAPTEHE Trigger: CTCATGCTCAGTCGGAGCTGAGTGAGACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | CTAATGTCTCGCCAGAAGGAAGGGACGCCCAGGGGATaGAGGGAGGAGCACAGCCTCAGTCTTCCCGTGTTA | + |
Preference number: 3 (lower is better) Translates to: LMSRQKEGTPRG*REEHSLSLPVL Trigger: TAACACGGGAAGACTGAGGCTGTGCTCCTCCCTGCATCCCCTGGGCGTCCCTTCCTTCTGGCGAGACATTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR-3UTR CAA 90 bp | AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAACCCACGGACAGAGACTaGCAAGGCGAGGGCTTACAC | + |
Preference number: 3 (lower is better) Translates to: SDTPDSSATGSNGNALGEPTDRD*QGEGLH Trigger: GTGTAAGCCCTCGCCTTGCAAGTCTCTGTCCGTGGG...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | CGAGCGAGACTCGTCGGGCTACCAACCTCAGGACTCTaGCCTGAAGGAGCTGGATGGTCAAACCCATCTGAA | + |
Preference number: 3 (lower is better) Translates to: RARLVGLPTSGL*PEGAGWSNPSE Trigger: TTCAGATGGGTTTGACCATCCAGCTCCTTCAGGGCAGAGTCCTGAGGTTGGTAGCCCGACGAGTCTCGCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | TTCCCACCAACTCGATGCAGAGCCCCGAGCGCTTCCTaGAGAGTGAAGCCGGCACCAAGAATCCTGTCAACA | + |
Preference number: 3 (lower is better) Translates to: FPPTRCRAPSAS*RVKPAPRILST Trigger: TGTTGACAGGATTCTTGGTGCCGGCTTCACTCTGCAGGAAGCGCTCGGGGCTCTGCATCGAGTTGGTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | CCACAGAACGCCCTGACAGTGGTCTGGCCGAGGAGCTaGCCTTGCTGTTACAGTTGGGATCTGACAGGATCA | + |
Preference number: 3 (lower is better) Translates to: PQNALTVVWPRS*PCCYSWDLTGS Trigger: TGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | CAGTGCTGGGAATACAAGCTCACCACACCTGGCTTCTaGAGTGCTGGGGGTTGGACTGAGGGCTTTCTGCAG | + |
Preference number: 3 (lower is better) Translates to: QCWEYKLTTPGF*SAGGWTEGFLQ Trigger: CTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTGAGCTTGTATTCCCAGCACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | GGAAAGCAGTCACCACAGAACGCCCTGACAGTGGTCTaGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGGAT | + |
Preference number: 3 (lower is better) Translates to: GKQSPQNALTVV*PRSCPCCYSWD Trigger: ATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTCTGTGGTGACTGCTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | AAGCTCACCACACCTGGCTTCTGCAGTGCTGGGGGTTaGACTGAGGGCTTTCTGCAGCTAGGCAGGCATTCT | + |
Preference number: 3 (lower is better) Translates to: KLTTPGFCSAGG*TEGFLQLGRHS Trigger: AGAATGCCTGCCTAGCTGCAGAAAGCCCTCAGTCCAACCCCCAGCACTGCAGAAGCCAGGTGTGGTGAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | TCAGTCTCCCAGACTCTCAAAGCATCTGACCGTGGCTaGGAGGGCCACTGGCAAGCAGGTTTTGCTAACCAG | + |
Preference number: 3 (lower is better) Translates to: SVSQTLKASDRG*EGHWQAGFANQ Trigger: CTGGTTAGCAAAACCTGCTTGCCAGTGGCCCTCCCAGCCACGGTCAGATGCTTTGAGAGTCTGGGAGACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR-3UTR CAA 90 bp | AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAAGCCACACCACTGCCTTaGCATGCCAATTTCGTCTGC | + |
Preference number: 3 (lower is better) Translates to: SDTPDSSATGSNGNALGEATPLP*HANFVC Trigger: GCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGC...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | TCTGGATTCTCCTTCACACACTGCAGAGGCCTTGGCTaGGTTCTGCTCTGGAGGGTGGAGCAGTCACCTATC | + |
Preference number: 3 (lower is better) Translates to: SGFSFTHCRGLG*VLLWRVEQSPI Trigger: GATAGGTGACTGCTCCACCCTCCAGAGCAGAACTCAGCCAAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | GAAGAACTTCCTAGCAGAAGTCTTCCTAACAGAGTCTaGACAGCCAGCAGGCTCCTGGCGGTCAGCCCTGAT | + |
Preference number: 3 (lower is better) Translates to: EELPSRSLPNRV*TASRLLAVSPD Trigger: ATCAGGGCTGACCGCCAGGAGCCTGCTGGCTGTGCAGACTCTGTTAGGAAGACTTCTGCTAGGAAGTTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | TGGGCCACACCACTGCCTTTGCATGCCAATTTCGTCTaGTCACAAAGGCCTTCTGGGAGGAGTCTGCCATCA | + |
Preference number: 3 (lower is better) Translates to: WATPLPLHANFV*SQRPSGRSLPS Trigger: TGATGGCAGACTCCTCCCAGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | AAGCAAGAACATCAAAGGCTCACCCCAAGTCCTGACTaGGGCTCAGTGCAAGCCCTGAGGGGATGCAGGAAA | + |
Preference number: 3 (lower is better) Translates to: KQEHQRLTPSPD*GSVQALRGCRK Trigger: TTTCCTGCATCCCCTCAGGGCTTGCACTGAGCCGCAGTCAGGACTTGGGGTGAGCCTTTGATGTTCTTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | AAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGTaGAACACTCTGCTGTCCAGCCTCTCGCTGTACACT | + |
Preference number: 3 (lower is better) Translates to: KVFCVTKTALVL*NTLLSSLSLYT Trigger: AGTGTACAGCGAGAGGCTGGACAGCAGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | CCTGTTTGCCCACCCCAACACCAATCACTTCTGCTCTaGATTCTCCTTCACACACTGCAGAGGCCTTGGCTG | + |
Preference number: 3 (lower is better) Translates to: PVCPPQHQSLLL*ILLHTLQRPWL Trigger: CAGCCAAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGAGCAGAAGTGATTGGTGTTGGGGTGGGCAAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | ACTAGGGCTCTTGATGACGGCATCCTGCCTGCCTGTTaGGCTGCACATAGCAACCAGAGACTGTTCAGCTGT | + |
Preference number: 3 (lower is better) Translates to: TRALDDGILPAC*AAHSNQRLFSC Trigger: ACAGCTGAACAGTCTCTGGTTGCTATGTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAAGAGCCCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | GGCCGAGGAGCTGCCCTTGCTGTTACAGTTGGGATCTaGCAGGATCAACACTGGGTTCACACTGATGTGATC | + |
Preference number: 3 (lower is better) Translates to: GRGAALAVTVGI*QDQHWVHTDVI Trigger: GATCACATCAGTGTGAACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | TCACCCCAAGTCCTGACTGCGGCTCAGTGCAAGCCCTaGGGGGATGCAGGAAACACCAAATGCTATTGTGTT | + |
Preference number: 3 (lower is better) Translates to: SPQVLTAAQCKP*GDAGNTKCYCV Trigger: AACACAATAGCATTTGGTGTTTCCTGCATCCCCTCAGGGCTTGCACTGAGCCGCAGTCAGGACTTGGGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | AATCCTGTCAACATCTGCAGCAGGAAAGATGAACGGTaGAAGAACGGAGGGGGTGGACAAGGACTGTGTGGG | + |
Preference number: 3 (lower is better) Translates to: NPVNICSRKDER*KNGGGGQGLCG Trigger: CCCACACAGTCCTTGTCCACCCCCTCCGTTCTTCCACCGTTCATCTTTCCTGCTGCAGATGTTGACAGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR-3UTR CAA 90 bp | TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATAGGCTCTCCCAGCACTaGCTCGCTGTCTCACTCAGC | + |
Preference number: 3 (lower is better) Translates to: WGNQTLKYNHCPSPDRKDRLSQH*LAVSLS Trigger: GCTGAGTGAGACAGCGAGCAAGTGCTGGGAGAGCCT...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR-3UTR CAA 90 bp | AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAACCCTTGCTGTTACAGTaGGGATCTGACAGGATCAAC | + |
Preference number: 3 (lower is better) Translates to: SDTPDSSATGSNGNALGEPLLLQ*GSDRIN Trigger: GTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGG...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | ACTGTTGTCAGAACTTCCATTGTATTTCCACCGCCATaGGGGGCGCTCACAAACAAGTACCGAGAGAGGGGC | + |
Preference number: 3 (lower is better) Translates to: TVVRTSIVFPPP*GALTNKYRERG Trigger: GCCCCTCTCTCGGTACTTGTTTGTGAGCGCCCCTCATGGCGGTGGAAATACAATGGAAGTTCTGACAACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | GGAGCAGGCTTCGAGGCAGAAGGTCTCACACATTCCTaGCCGTCTACTAAAGCTTCCTTCGCCAAGTTCCTA | + |
Preference number: 3 (lower is better) Translates to: GAGFEAEGLTHS*PSTKASFAKFL Trigger: TAGGAACTTGGCGAAGGAAGCTTTAGTAGACGGTCAGGAATGTGTGAGACCTTCTGCCTCGAAGCCTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | GTGATTATTGCACAGTGGGGCCCACGGACAGAGACTTaGAAGGCGAGGGCTTACACTAAAAAGGCCACAACA | + |
Preference number: 3 (lower is better) Translates to: VIIAQWGPRTET*KARAYTKKATT Trigger: TGTTGTGGCCTTTTTAGTGTAAGCCCTCGCCTTGCAAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | GCAATCCTGTTTGCCCACCCCAACACCAATCACTTCTaGTCTGGATTCTCCTTCACACACTGCAGAGGCCTT | + |
Preference number: 3 (lower is better) Translates to: AILFAHPNTNHF*SGFSFTHCRGL Trigger: AAGGCCTCTGCAGTGTGTGAAGGAGAATCCAGAGCAGAAGTGATTGGTGTTGGGGTGGGCAAACAGGATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR-3UTR CAA 90 bp | TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATTTTTTCTGTGCAGTGTaGGGGGTCAAGTCCAGGGCC | + |
Preference number: 3 (lower is better) Translates to: WGNQTLKYNHCPSPDRKDFFCAV*GVKSRA Trigger: GGCCCTGGACTTGACCCCCAACACTGCACAGAAAAA...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR TCA 72 bp | CTAATGTTTGAAGAAGGTAAGAGTGAATCAGAGTGGTaGGGAGCCAAGGACCACACCAGGCGGCAGTCCTCT | + |
Preference number: 3 (lower is better) Translates to: LMFEEGKSESEW*GAKDHTRRQSS Trigger: AGAGGACTGCCGCCTGGTGTGGTCCTTGGCTCCTCACCACTCTGATTCACTCTTACCTTCTTCAAACATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | TGTCTTCCAGGTTGTAAGGGCTGCTCAAGGAGCCTGTaGACACATATCTGGTTGGCTCCTGTAGGAACACAG | + |
Preference number: 3 (lower is better) Translates to: CLPGCKGCSRSL*THIWLAPVGTQ Trigger: CTGTGTTCCTACAGGAGCCAACCAGATATGTGTTCACAGGCTCCTTGAGCAGCCCTTACAACCTGGAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | AACGGGAATGCGCTGGGTGAACTGGGCATAGTTGTGTaGACCTGTAATCCTAGTATTCTAAAGGCTGAGGCC | + |
Preference number: 3 (lower is better) Translates to: NGNALGELGIVV*TCNPSILKAEA Trigger: GGCCTCAGCCTTTAGAATACTAGGATTACAGGTGCACACAACTATGCCCAGTTCACCCAGCGCATTCCCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | CAGGTTTGGGGCAACCAAACTCTTAAGTACAATCACTaGCCATCACCTGACAGGAAGGATGGAAGGGGAAGC | + |
Preference number: 3 (lower is better) Translates to: QVWGNQTLKYNH*PSPDRKDGRGS Trigger: GCTTCCCCTTCCATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCAAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | TGTTTCTCTGTGCTGCTGAAGGCCGTTCACGGGACTTaGGGTCTGATTTTCTGGATGCCAACTCTTTTCCTC | + |
Preference number: 3 (lower is better) Translates to: CFSVLLKAVHGT*GLIFWMPTLFL Trigger: GAGGAAAAGAGTTGGCATCCAGAAAATCAGACCCCAAGTCCCGTGAACGGCCTTCAGCAGCACAGAGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | TACAGAGTCCTGAAGCTGGAAGACCCTTCTCTGCACTaGGAAGATGAGCGTGTCTTTGTAGCTCACCTTTCC | + |
Preference number: 3 (lower is better) Translates to: YRVLKLEDPSLH*EDERVFVAHLS Trigger: GGAAAGGTGAGCTACAAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTCTTCCAGCTTCAGGACTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | CAGTTCCTACGATTTCTGTCTTTCCTGATTCAGAGGTaGCCTGGTGACAGGAGCCTTGTGAGTACTGGTCAC | + |
Preference number: 3 (lower is better) Translates to: QFLRFLSFLIQR*PGDRSLVSTGH Trigger: GTGACCAGTACTCACAAGGCTCCTGTCACCAGGCCACCTCTGAATCAGGAAAGACAGAAATCGTAGGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | ATTCTTTCAAACCTATCCAGAGTGATTATTGCACAGTaGGGCCCACGGACAGAGACTTGCAAGGCGAGGGCT | + |
Preference number: 3 (lower is better) Translates to: ILSNLSRVIIAQ*GPRTETCKARA Trigger: AGCCCTCGCCTTGCAAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCACTCTGGATAGGTTTGAAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | TCTAAAGACCAGGCTCCTGTCGGGTTTAGCTGCTGCTaGACTTGTGGGCTTCAGGGATACTCCATGTTTGAT | + |
Preference number: 3 (lower is better) Translates to: SKDQAPVGFSCC*TCGLQGYSMFD Trigger: ATCAAACATGGAGTATCCCTGAAGCCCACAAGTTCAGCAGCAGCTAAACCCGACAGGAGCCTGGTCTTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | TATATTTTAGCTAGGGCCACTTCCCAAACTTCCACATaGGAGAGTCGTTGGGCCACACCACTGCCTTTGCAT | + |
Preference number: 3 (lower is better) Translates to: YILARATSQTST*ESRWATPLPLH Trigger: ATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGAAGTTTGGGAAGTGGCCCTAGCTAAAATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CAA 90 bp | GCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAAGCATCTGACCGTGGCTGGCTCTTGTCCTGCTGTTaGCAAGGCAGTTTATTATAT | + |
Preference number: 3 (lower is better) Translates to: ASSQFSVSQTLKASDRGWLLSCC*QGSLLY Trigger: ATATAATAAACTGCCTTGCAAACAGCAGGACAAGAG...CCAGCCACGGTCAGATGCTTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | CCTTTCCTCAGAGCTTCCAAACTGACAACTTCTTCATaGAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCC | + |
Preference number: 3 (lower is better) Translates to: PFLRASKLTTSS*SSRSSASQRQP Trigger: GGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTCATGAAGAAGTTGTCAGTTTGGAAGCTCTGAGGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | GAAACACTTGGTTGGCTCTCAGCTCCTATCTCTGACTaGCAGGTAACATGCTCAGGTGACTCTTCTGAAGCT | + |
Preference number: 3 (lower is better) Translates to: ETLGWLSAPISD*QVTCSGDSSEA Trigger: AGCTTCAGAAGAGTCACCTGAGCATGTTACCTGTCAGTCAGAGATAGGAGCTGAGAGCCAACCAAGTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | TACAAGAAAATCCTTTGGTGCATAAATGGAGACCACTaGTGGAGGAAAGCAGTCACCACAGAACGCCCTGAC | + |
Preference number: 3 (lower is better) Translates to: YKKILWCINGDH*WRKAVTTERPD Trigger: GTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | GTAGTTGTGAGAGTTAAACTAGCGTCCTGTCTTGTGTaGAGATACACTCTGAGGCCCTGGGTTCCTTTCTCA | + |
Preference number: 3 (lower is better) Translates to: VVVRVKLASCLV*RYTLRPWVPFS Trigger: TGAGAAAGGAACCCAGGGCCTCAGAGTGTATCTCCACACAAGACAGGACGCTAGTTTAACTCTCACAACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | GCTTCAGACATGGCTCTAAGCTGGGTGACAGAATCCTaGGAGCAATTTCCTAGCGAATCACACAGACATCTT | + |
Preference number: 3 (lower is better) Translates to: ASDMALSWVTES*EQFPSESHRHL Trigger: AAGATGTCTGTGTGATTCGCTAGGAAATTGCTCCCAGGATTCTGTCACCCAGCTTAGAGCCATGTCTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | AAGAAAATCCTTTGGTGCATAAATGGAGACCACTGCTaGAGGAAAGCAGTCACCACAGAACGCCCTGACAGT | + |
Preference number: 3 (lower is better) Translates to: KKILWCINGDHC*RKAVTTERPDS Trigger: ACTGTCAGGGCGTTCTGTGGTGACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | GATGAACAAAATTCTTCTGCTGATTCCACAGAGGGCTaGCCGTGGCCACTTAGAAGGGAAGAGGAATTGTCA | + |
Preference number: 3 (lower is better) Translates to: DEQNSSADSTEG*PWPLRREEELS Trigger: TGACAATTCCTCTTCCCTTCTAAGTGGCCACGGTCAGCCCTCTGTGGAATCAGCAGAAGAATTTTGTTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR CCA 72 bp | GCAGGTCACAGACACACTCATTTTAGTTGGCAGGTTTaGGGCAACCAAACTCTTAAGTACAATCACTGCCCA | + |
Preference number: 3 (lower is better) Translates to: AGHRHTHFSWQV*GNQTLKYNHCP Trigger: TGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCAAACCTGCCAACTAAAATGAGTGTGTCTGTGACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR-3UTR CAA 90 bp | AGTAGCACCAGGTTTCACGCTAATGTGAATTTCCCCACACCCTTCCCATGGTCACAGATTTTCTACACATaGTGTGTGTGTGTGTGTAGT | + |
Preference number: 3 (lower is better) Translates to: SSTRFHANVNFPTPFPWSQIFYT*CVCVCS Trigger: ACTACACACACACACACACAATGTGTAGAAAATCTG...TGACCATGGGAAGGGTGTGGGGAAATTCACATTAGCGTGAAACCTGGTGCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR TCA 72 bp | TATTCCAGGAAAGGATTCTTTCAAACCTATCCAGAGTaGTTATTGCACAGTGGGGCCCACGGACAGAGACTT | + |
Preference number: 3 (lower is better) Translates to: YSRKGFFQTYPE*LLHSGAHGQRL Trigger: AAGTCTCTGTCCGTGGGCCCCACTGTGCAATAATCACTCTGGATAGGTTTGAAAGAATCCTTTCCTGGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | TCCATTGTAGACATGTCAACATTATCTTCTGGGAGCTaGAATTCCCGAGTCAAGATGGAATGTTCCACAGGC | + |
Preference number: 3 (lower is better) Translates to: SIVDMSTLSSGS*NSRVKMECSTG Trigger: GCCTGTGGAACATTCCATCTTGACTCGGGAATTGCAGCTCCCAGAAGATAATGTTGACATGTCTACAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
||
3UTR GCA 72 bp | CAGCTTGAGTGTGAGCTTTACAAGAAAATCCTTTGGTaGATAAATGGAGACCACTGCTGGAGGAAAGCAGTC | + |
Preference number: 3 (lower is better) Translates to: QLECELYKKILW*INGDHCWRKAV Trigger: GACTGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTCACACTCAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR-3UTR CAA 90 bp | GAAAGGATCATGGTACTCAGTGTGACTTGCCATCGTGTCACTGAAGTGAGTCTCGGCTCAACATTTTGCTaGCAGATTTTCTACACATTG | + |
Preference number: 3 (lower is better) Translates to: ERIMVLSVTCHRVTEVSLGSTFC*QIFYTL Trigger: CAATGTGTAGAAAATCTGCAAGCAAAATGTTGAGCC...GAGACTCACTTCAGTGACACGATGGCAAGTCACACTGAGTACCATGATCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 72 bp | CTTTCTGCAGCTAGGCAGGCATTCTGCCTGCCGCTGTaGTATTATTTCCCTACATCCTTAACTGATTTTATT | + |
Preference number: 3 (lower is better) Translates to: LSAARQAFCLPL*YYFPTSLTDFI Trigger: AATAAAATCAGTTAAGGATGTAGGGAAATAATAGCACAGCGGCAGGCAGAATGCCTGCCTAGCTGCAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | CTTCAGCTTGAGTGTGAGCTTTACAAGAAAATCCTTTaGTGCATAAATGGAGACCACTGCTGGAGGAAAGCA | + |
Preference number: 3 (lower is better) Translates to: LQLECELYKKIL*CINGDHCWRKA Trigger: TGCTTTCCTCCAGCAGTGGTCTCCATTTATGCACCAAAGGATTTTCTTGTAAAGCTCACACTCAAGCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 72 bp | AAGAGATCTGGATACAAATGCACTATTGGTTTCCCATaGAAGGTGCATGTAAGGGAGAGTCACTCAACACAA | + |
Preference number: 3 (lower is better) Translates to: KRSGYKCTIGFP*KVHVRESHSTQ Trigger: TTGTGTTGAGTGACTCTCCCTTACATGCACCTTGCATGGGAAACCAATAGTGCATTTGTATCCAGATCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | GTCTATTCTGCAGGTCACAGACACACTCATTTTAGTTaGCAGGTTTGGGGCAACCAAACTCTTAAGTACAAT | + |
Preference number: 3 (lower is better) Translates to: VYSAGHRHTHFS*QVWGNQTLKYN Trigger: ATTGTACTTAAGAGTTTGGTTGCCCCAAACCTGCCAACTAAAATGAGTGTGTCTGTGACCTGCAGAATAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR GCA 72 bp | TTCTTTAGTTGCTTTCTCAGACAGAGCTATGTAAGATaGACTCATGTTCTATGCCTTATGATCTGGGGTTCA | + |
Preference number: 3 (lower is better) Translates to: FFSCFLRQSYVR*THVLCLMIWGS Trigger: TGAACCCCAGATCATAAGGCATAGAACATGAGTGCATCTTACATAGCTCTGTCTGAGAAAGCAACTAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | TTTGTTATCCATTGTAGACATGTCAACATTATCTTCTaGGAGCTGCAATTCCCGAGTCAAGATGGAATGTTC | + |
Preference number: 3 (lower is better) Translates to: FVIHCRHVNIIF*ELQFPSQDGMF Trigger: GAACATTCCATCTTGACTCGGGAATTGCAGCTCCCAGAAGATAATGTTGACATGTCTACAATGGATAACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | TATGTAAGATGCACTCATGTTCTATGCCTTATGATCTaGGGTTCAAACTTTGCAGGTAAACAAACTCCCATG | + |
Preference number: 3 (lower is better) Translates to: YVRCTHVLCLMI*GSNFAGKQTPM Trigger: CATGGGAGTTTGTTTACCTGCAAAGTTTGAACCCCAGATCATAAGGCATAGAACATGAGTGCATCTTACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CCA 72 bp | ACCATTTTTGGTATACAGGATGCAGAAACTCCTATCTaGGGAAACCTAATGTTTGAAGAAGGTAAGAGTGAA | + |
Preference number: 3 (lower is better) Translates to: TIFGIQDAETPI*GNLMFEEGKSE Trigger: TTCACTCTTACCTTCTTCAAACATTAGGTTTCCCCAGATAGGAGTTTCTGCATCCTGTATACCAAAAATGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | GCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTGGGAGGGCTGGGGTGTCAGTTCTCGGCGGCGGGGATaGCGGACTCGAGCTCGCACA | + |
Preference number: 4 (lower is better) Translates to: ASRLLAVSPDHWEGWGVSSRRRG*RTRART Trigger: TGTGCGAGCTCGAGTCCGGCATCCCCGCCGCCGAGA...ACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | GCCAGCAGGCTCCTGGCGGTCAGCCCTGATCACTGGGAGGGCTGGGGTGTCAGTAGCGCGCGGAAGTTGTaGAGCTCGAAGTCGGCGTCG | + |
Preference number: 4 (lower is better) Translates to: ASRLLAVSPDHWEGWGVSSARKL*SSKSAS Trigger: CGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCT...ACTGACACCCCAGCCCTCCCAGTGATCAGGGCTGACCGCCAGGAGCCTGCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR TCA 90 bp | AAGTACCGAGAGAGGGGCCAGGGACAAAAGGCTCTCCCAGCACTTGCTCGCTGTCCAGGAGATGAGTGCTaGGCCTGGGTTCTGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: KYRERGQGQKALPALARCPGDEC*AWVLGS Trigger: GCTGCCCAGAACCCAGGCTCAGCACTCATCTCCTGG...ACAGCGAGCAAGTGCTGGGAGAGCCTTTTGTCCCTGGCCCCTCTCTCGGTACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR TCA 90 bp | GGTTGGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTGGTCAAGGAAGGTGGTCTGTaGGCCCGTGGTGCCAATCAC | + |
Preference number: 4 (lower is better) Translates to: GWSNPLRGNPAPGQTLLVKEGGL*ARGANH Trigger: GTGATTGGCACCACGGGCTCACAGACCACCTTCCTT...GACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR TCA 90 bp | GGTTGGTCCAATCCACTACGGGGCAACCCAGCTCCAGGGCAGACACTGCTGGTCACCGTAAGAAGCCAGTaGCCTGTGGTTGTCGGTGAG | + |
Preference number: 4 (lower is better) Translates to: GWSNPLRGNPAPGQTLLVTVRSQ*PVVVGE Trigger: CTCACCGACAACCACAGGTCACTGGCTTCTTACGGT...GACCAGCAGTGTCTGCCCTGGAGCTGGGTTGCCCCGTAGTGGATTGGACCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | GAAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGTGGAACACTCTCCTCAGGAAGGAAGGTaGTCTGTGAGCCCGTGGTGC | + |
Preference number: 4 (lower is better) Translates to: EAQGLLRHKDSPGPVEHSPQEGR*SVSPWC Trigger: GCACCACGGGCTCACAGACCACCTTCCTTCCTGAGG...AGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 72 bp | GAACGCCCTGACAGTGGTCTGGCCGAGGAGCTGCCCTaGCTGTTACAGTTGGGATCTGACAGGATCAACACT | + |
Preference number: 4 (lower is better) Translates to: ERPDSGLAEELP*LLQLGSDRINT Trigger: AGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACTGTCAGGGCGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | AGACGCCTCGACCCTGTCTCTAGTACACGCCAGTGTCTGTCTAAGCCATTATCTGCTCGGTCCTGCTGCTaGTCCACCAAGACCCTAGAG | + |
Preference number: 4 (lower is better) Translates to: RRLDPVSSTRQCLSKPLSARSCC*STKTLE Trigger: CTCTAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGC...AGATAATGGCTTAGACAGACACTGGCGTGTACTAGAGACAGGGTCGAGGCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | GAAAGGATCATGGTACTCAGTGTGACTTGCCATCGTGTCACTGAAGTGAGTCTCGCTGAGCCTGGGTTCTaGGCAGCTGGCGCTGTTGGG | + |
Preference number: 4 (lower is better) Translates to: ERIMVLSVTCHRVTEVSLAEPGF*AAGAVG Trigger: CCCAACAGCGCCAGCTGCCCAGAACCCAGGCTCAGC...GAGACTCACTTCAGTGACACGATGGCAAGTCACACTGAGTACCATGATCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 72 bp | AGTGGTCTGGCCGAGGAGCTGCCCTTGCTGTTACAGTaGGGATCTGACAGGATCAACACTGGGTTCACACTG | + |
Preference number: 4 (lower is better) Translates to: SGLAEELPLLLQ*GSDRINTGFTL Trigger: CAGTGTGAACCCAGTGTTGATCCTGTCAGATCCCAACTGTAACAGCAAGGGCAGCTCCTCGGCCAGACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | GAAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGTGGAACACTCTAGCAAGGACAACTCATaGGGGTTGGCCAGCAGCATG | + |
Preference number: 4 (lower is better) Translates to: EAQGLLRHKDSPGPVEHSSKDNS*GLASSM Trigger: CATGCTGCTGGCCAACCCGCATGAGTTGTCCTTGCT...AGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 72 bp | ATAGCTAGAGATTCAATGCTATTGGGGTCACCGGGCTaGATGGCGCAGACGGAAGCAGAAACAGAGCGAGCG | + |
Preference number: 4 (lower is better) Translates to: IARDSMLLGSPG*MAQTEAETERA Trigger: CGCTCGCTCTGTTTCTGCTTCCGTCTGCGCCATCAAGCCCGGTGACCCCAATAGCATTGAATCTCTAGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 72 bp | GGATTATCTGAAGCGAGATGTGCTACACTAGGGCTCTaGATGACGGCATCCTGCCTGCCTGTTGAGCTGCAC | + |
Preference number: 4 (lower is better) Translates to: GLSEARCATLGL*MTASCLPVELH Trigger: GTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAAGAGCCCTAGTGTAGCACATCTCGCTTCAGATAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 72 bp | TCCACATGGGAGAGTCGTTGGGCCACACCACTGCCTTaGCATGCCAATTTCGTCTGCTCACAAAGGCCTTCT | + |
Preference number: 4 (lower is better) Translates to: STWESRWATPLP*HANFVCSQRPS Trigger: AGAAGGCCTTTGTGAGCAGACGAAATTGGCATGCAAAGGCAGTGGTGTGGCCCAACGACTCTCCCATGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR TCA 90 bp | AGACGCCTCGACCCTGTCTCTAGTACACGCCAGTGTCTGTCTAAGCCATTATCTCATTTCCCCAGGAGATaGGTGCTGAGCCTGGGTTCT | + |
Preference number: 4 (lower is better) Translates to: RRLDPVSSTRQCLSKPLSHFPRR*VLSLGS Trigger: AGAACCCAGGCTCAGCACTCATCTCCTGGGGAAATG...AGATAATGGCTTAGACAGACACTGGCGTGTACTAGAGACAGGGTCGAGGCGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | ACGTCGGGATTCCTGAGAGCATCTTCGCAGTTCTCAGTCTCCCAGACTCTCAAAACAACTCATGCGGGTTaGCCAGCAGCATGTCTCGGA | + |
Preference number: 4 (lower is better) Translates to: TSGFLRASSQFSVSQTLKTTHAG*PAACLG Trigger: TCCGAGACATGCTGCTGGCCAACCCGCATGAGTTGT...TTTGAGAGTCTGGGAGACTGAGAACTGCGAAGATGCTCTCAGGAATCCCGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 72 bp | TTATGGCGACAGAACAGCTCTTCCTGGCTGACTCTGTaGATCTGCGGACATCTTCTCGGTCAGGTGACAAGC | + |
Preference number: 4 (lower is better) Translates to: LWRQNSSSWLTL*ICGHLLGQVTS Trigger: GCTTGTCACCTGACCGAGAAGATGTCCGCAGATCAACAGAGTCAGCCAGGAAGAGCTGTTCTGTCGCCATAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | CCCATGGTCATGAAGGTATTTGGCAATCAGTCCATGCAGCAACCTATGATGTACCCGCCAAGGGTGGGTTaGGCTCCTTCAGCAAGGACA | + |
Preference number: 4 (lower is better) Translates to: PMVMKVFGNQSMQQPMMYPPRVG*APSART Trigger: TGTCCTTGCTGAAGGAGCGCAACCCACCCTTGGCGG...GTACATCATAGGTTGCTGCATGGACTGATTGCCAAATACCTTCATGACCATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | GGATGCCAACTCTTTTCCTCCGCAAATATCTGTGGCTCCCGCATCCCAGTAGTTCTACTCCTTTGGCAATaGCAGCCCACCGACGATCTA | + |
Preference number: 4 (lower is better) Translates to: GCQLFSSANICGSRIPVVLLLWQ*QPTDDL Trigger: TAGATCGTCGGTGGGCTGGCATTGCCAAAGGAGTAG...AACTACTGGGATGCGGGAGCCACAGATATTTGCGGAGGAAAAGAGTTGGCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | CCCATGGTCATGAAGGTATTTGGCAATCAGTCCATGCAGCAACCTATGATGTACAAGTCGGCGTCGACCTaGAGGGAAAAGGTCACCTCG | + |
Preference number: 4 (lower is better) Translates to: PMVMKVFGNQSMQQPMMYKSAST*REKVTS Trigger: CGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTT...GTACATCATAGGTTGCTGCATGGACTGATTGCCAAATACCTTCATGACCATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR TCA 90 bp | TGGGGCAACCAAACTCTTAAGTACAATCACTGCCCATCACCTGACAGGAAGGATACCTGTGGTTGTCGGTaGGAGGCCTTTCTGCATAGA | + |
Preference number: 4 (lower is better) Translates to: WGNQTLKYNHCPSPDRKDTCGCR*EAFLHR Trigger: TCTATGCAGAAAGGCCTCTCACCGACAACCACAGGT...ATCCTTCCTGTCAGGTGATGGGCAGTGATTGTACTTAAGAGTTTGGTTGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 72 bp | CACATCTGGAAGCGGCCGTATCTCCAGCCCTTCAGCTaGAGTGTGAGCTTTACAAGAAAATCCTTTGGTGCA | + |
Preference number: 4 (lower is better) Translates to: HIWKRPYLQPFS*SVSFTRKSFGA Trigger: TGCACCAAAGGATTTTCTTGTAAAGCTCACACTCAAGCTGAAGGGCTGGAGATACGGCCGCTTCCAGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | GCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAACAGGGCAGACACTGCTaGTCTCCGGCCTGTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: ACRFSTHCVCVCVVYLCEQGRHC*SPACLG Trigger: GCCCAGACAGGCCGGAGACCAGCAGTGTCTGCCCTG...TTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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3UTR CAA 72 bp | GGAAAGAAAGGGATGAAGACTGCACCAAGGCCACTGTaGTCAGAACTTCCATTGTATTTCCACCGCCATGAG | + |
Preference number: 4 (lower is better) Translates to: GKKGMKTAPRPL*SELPLYFHRHE Trigger: CTCATGGCGGTGGAAATACAATGGAAGTTCTGACAACAGTGGCCTTGGTGCAGTCTTCATCCCTTTCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | ACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCTTTTTCAAACTCCGGGCTCGGTCCTaGTGCTGCTCCACCAAGACC | + |
Preference number: 4 (lower is better) Translates to: THCVCVCVVYLCEKGFFKLRARS*CCSTKT Trigger: GGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAG...TTTGAAAAAGCCCTTTTCACACAAATATACTACACACACACACACACAATGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | CACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCGGCAGCTGGCGCTGTTaGGGGTTTGACGTGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: HKTICFIPEYIIVMRIKSGSWRC*GFDVPG Trigger: GCCTGGCACGTCAAACCCCCAACAGCGCCAGCTGCC...GCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | CAACATTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATCGGGCTCGGTCCTGCTaGTGCTCCACCAAGACCCTA | + |
Preference number: 4 (lower is better) Translates to: QHFACRFSTHCVCVCVVYRARSC*CSTKTL Trigger: TAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCG...ATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAATGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | AGACGCCTCGACCCTGTCTCTAGTACACGCCAGTGTCTGTCTAAGCCATTATCTTCCTCGATGTTCTGCTaGCTTATATCTTCTTCTATC | + |
Preference number: 4 (lower is better) Translates to: RRLDPVSSTRQCLSKPLSSSMFC*LISSSI Trigger: GATAGAAGAAGATATAAGGCAGCAGAACATCGAGGA...AGATAATGGCTTAGACAGACACTGGCGTGTACTAGAGACAGGGTCGAGGCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCATTCCCACCAACTCGATaGAGAGCCCCGAGCGCTTCC | + |
Preference number: 4 (lower is better) Translates to: HENKKLCMHTLPIHLKGPFPPTR*RAPSAS Trigger: GGAAGCGCTCGGGGCTCTGCATCGAGTTGGTGGGAA...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR TCA 90 bp | CAACATTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATGCGCTGTTGGGGGTTTaGCGTGCCAGGCACAGCTAT | + |
Preference number: 4 (lower is better) Translates to: QHFACRFSTHCVCVCVVYALLGV*RARHSY Trigger: ATAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGC...ATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAATGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | CGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCGGTCTCCGGCCTGTCTaGGCCTGGATTATGCACATG | + |
Preference number: 4 (lower is better) Translates to: RHENKKLCMHTLPIHLKGGLRPV*AWIMHM Trigger: CATGTGCATAATCCAGGCCCAGACAGGCCGGAGACC...GCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR GCA 90 bp | AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCGGCATGGCTAGACTCTaGTCTGCTGAGGAAGCAAGG | + |
Preference number: 4 (lower is better) Translates to: RFSTHCVCVCVVYLCEKGGMARL*SAEEAR Trigger: CCTTGCTTCCTCAGCAGAGCAGAGTCTAGCCATGCC...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | CACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCGTGTGCCTACTCCTTTaGCAATGCCAGCCCACCGAC | + |
Preference number: 4 (lower is better) Translates to: HKTICFIPEYIIVMRIKSVCLLL*QCQPTD Trigger: GTCGGTGGGCTGGCATTGCCAAAGGAGTAGGCACAC...GCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | CCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATCACAAAGACAGCCCTaGTCCTGTGGAACACTCTGC | + |
Preference number: 4 (lower is better) Translates to: PEYIIVMRIKSFVCTHCQSQRQP*SCGTLC Trigger: GCAGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGA...TTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | TTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGACTGTGTGGGAGGTTaGTCCAATCCACTACGGGGC | + |
Preference number: 4 (lower is better) Translates to: FACRFSTHCVCVCVVYLCDCVGG*SNPLRG Trigger: GCCCCGTAGTGGATTGGACCAACCTCCCACACAGTC...ACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | CAACATTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATGAAGAACGGAGGGGGTaGACAAGGACTGTGTGGGAG | + |
Preference number: 4 (lower is better) Translates to: QHFACRFSTHCVCVCVVYEERRG*TRTVWE Trigger: CTCCCACACAGTCCTTGTCCACCCCCTCCGTTCTTC...ATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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3UTR CAA 72 bp | CAGATTTCTCCAGATTACCTGCAACAACGGCTTCTTTaGATGACTTATGGAAAGGCATGGCTAGACTCTGCT | + |
Preference number: 4 (lower is better) Translates to: QISPDYLQQRLL*MTYGKAWLDSA Trigger: AGCAGAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGAAGCCGTTGTTGCAGGTAATCTGGAGAAATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | TTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCTTTTTGATGACGGCATCCTaGCTGCCTGTTGAGCTGCAC | + |
Preference number: 4 (lower is better) Translates to: FSTHCVCVCVVYLCEKGFLMTAS*LPVELH Trigger: GTGCAGCTCAACAGGCAGGCAGGATGCCGTCATCAA...AAAGCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR GCA 90 bp | CCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAAGGCACCCTCACTTGCTaGAAGTTCAGGTGCTATTTC | + |
Preference number: 4 (lower is better) Translates to: PEYIIVMRIKSFVCTHCQGTLTC*KFRCYF Trigger: GAAATAGCACCTGAACTTGCAGCAAGTGAGGGTGCC...TTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR GCA 90 bp | CGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCGTGGGCACCCTCACTTaGTGCAAGTTCAGGTGCTAT | + |
Preference number: 4 (lower is better) Translates to: RHENKKLCMHTLPIHLKGVGTLT*CKFRCY Trigger: ATAGCACCTGAACTTGCAGCAAGTGAGGGTGCCCAC...GCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | TTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGGCGTCCTGTCTTGTGTaGAGATACACTCTGAGGCCC | + |
Preference number: 4 (lower is better) Translates to: FCLQIFYTLCVCVCSIFVASCLV*RYTLRP Trigger: GGGCCTCAGAGTGTATCTCCACACAAGACAGGACGC...CACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | CGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCTGGACAAGGACTGTGTaGGAGGTTGGTCCAATCCAC | + |
Preference number: 4 (lower is better) Translates to: RHENKKLCMHTLPIHLKGWTRTV*EVGPIH Trigger: GTGGATTGGACCAACCTCCCACACAGTCCTTGTCCA...GCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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3UTR CAA 72 bp | CCACTTCCCACAATTATGTTGGGACTACAATGTTCTTaGCTAACAAAACAAGAAGGGCAAGGTCTGCATTCC | + |
Preference number: 4 (lower is better) Translates to: PLPTIMLGLQCS*LTKQEGQGLHS Trigger: GGAATGCAGACCTTGCCCTTCTTGTTTTGTTAGCAAAGAACATTGTAGTCCCAACATAATTGTGGGAAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 72 bp | AATGTTCAACCACTGAGCTACACAGGTATAATTCTTTaGGAGACAGGGTTTCATGTAACCCAAGCTGACCTG | + |
Preference number: 4 (lower is better) Translates to: NVQPLSYTGIIL*ETGFHVTQADL Trigger: CAGGTCAGCTTGGGTTACATGAAACCCTGTCTCCAAAAGAATTATACCTGTGTAGCTCAGTGGTTGAACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | TTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGCCGTTCACGGGACTTaGGGTCTGATTTTCTGGATG | + |
Preference number: 4 (lower is better) Translates to: FACRFSTHCVCVCVVYLCAVHGT*GLIFWM Trigger: CATCCAGAAAATCAGACCCCAAGTCCCGTGAACGGC...ACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCGACCCTTCTCTGCACTaGGAAGATGAGCGTGTCTTT | + |
Preference number: 4 (lower is better) Translates to: RFSTHCVCVCVVYLCEKGDPSLH*EDERVF Trigger: AAAGACACGCTCATCTTCCCAGTGCAGAGAAGGGTC...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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3UTR CAA 72 bp | AATGACGTGTGGCCTAGCCCACTTCCCACAATTATGTaGGGACTACAATGTTCTTTGCTAACAAAACAAGAA | + |
Preference number: 4 (lower is better) Translates to: NDVWPSPLPTIM*GLQCSLLTKQE Trigger: TTCTTGTTTTGTTAGCAAAGAACATTGTAGTCCCAACATAATTGTGGGAAGTGGGCTAGGCCACACGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR TCA 90 bp | CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCATCTTCTATCTTTGCCTaGGCTTCGAGATCAAAGGGG | + |
Preference number: 4 (lower is better) Translates to: HENKKLCMHTLPIHLKGPSSIFA*ASRSKG Trigger: CCCCTTTGATCTCGAAGCTCAGGCAAAGATAGAAGA...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR TCA 90 bp | CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCACTGTTCTTCCAGAATTaGGAAGGAGCACGCCAGAAA | + |
Preference number: 4 (lower is better) Translates to: HENKKLCMHTLPIHLKGPLFFQN*EGARQK Trigger: TTTCTGGCGTGCTCCTTCTCAATTCTGGAAGAACAG...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | ACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCTTTTTCAAAAAGGCTTTCACAGGATaGCCGTTCACTCTGCAGTTG | + |
Preference number: 4 (lower is better) Translates to: THCVCVCVVYLCEKGFFKKAFTG*PFTLQL Trigger: CAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTT...TTTGAAAAAGCCCTTTTCACACAAATATACTACACACACACACACACAATGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR GCA 90 bp | ATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATAAGAAGGGCAAGGTCTaGATTCCCACCAACTCGATG | + |
Preference number: 4 (lower is better) Translates to: IHHRHENKKLCMHTLPIHKKGKV*IPTNSM Trigger: CATCGAGTTGGTGGGAATGCAGACCTTGCCCTTCTT...ATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACGATGATGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCCTTTCTGCACAGGCCTaGCTCATAATAGTCATCTGG | + |
Preference number: 4 (lower is better) Translates to: RFSTHCVCVCVVYLCEKGLSAQA*LIIVIW Trigger: CCAGATGACTATTATGAGCCAGGCCTGTGCAGAAAG...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | TTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGCCTGAAGGAGCTGGATaGTCAAACCCATCTGAAGTC | + |
Preference number: 4 (lower is better) Translates to: FCLQIFYTLCVCVCSIFVPEGAG*SNPSEV Trigger: GACTTCAGATGGGTTTGACCATCCAGCTCCTTCAGG...CACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | GCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAATTCCCGAGTCAAGATaGAATGTTCCACAGGCTCAC | + |
Preference number: 4 (lower is better) Translates to: ACRFSTHCVCVCVVYLCEIPESR*NVPQAH Trigger: GTGAGCCTGTGGAACATTCCATCTTGACTCGGGAAT...TTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | CACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCCAGAACAGCTCTTCCTaGCTGACTCTGTTGATCTGC | + |
Preference number: 4 (lower is better) Translates to: HKTICFIPEYIIVMRIKSQNSSS*LTLLIC Trigger: GCAGATCAACAGAGTCAGCCAGGAAGAGCTGTTCTG...GCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR GCA 90 bp | GCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAATTATCTTCTGGGAGCTaGAATTCCCGAGTCAAGATG | + |
Preference number: 4 (lower is better) Translates to: ACRFSTHCVCVCVVYLCELSSGS*NSRVKM Trigger: CATCTTGACTCGGGAATTGCAGCTCCCAGAAGATAA...TTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | TTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTACTTATGGAAAGGCATaGCTAGACTCTGCTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: FACRFSTHCVCVCVVYLCTYGKA*LDSALL Trigger: CAGCAGAGCAGAGTCTAGCCATGCCTTTCCATAAGT...ACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CCA 90 bp | CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCAGTCAACATTATCTTCTaGGAGCTGCAATTCCCGAGT | + |
Preference number: 4 (lower is better) Translates to: HENKKLCMHTLPIHLKGPVNIIF*ELQFPS Trigger: ACTCGGGAATTGCAGCTCCCAGAAGATAATGTTGAC...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR GCA 90 bp | CAAAGTACTCCTAAGAGCAACACCTGTATAATCACTGATTTATCAAACTGCTTCTATGTTACACCTTTCTaGACAGGCCTGGCTCATAAT | + |
Preference number: 4 (lower is better) Translates to: QSTPKSNTCIITDLSNCFYVTPF*TGLAHN Trigger: ATTATGAGCCAGGCCTGTGCAGAAAGGTGTAACATA...GAAGCAGTTTGATAAATCAGTGATTATACAGGTGTTGCTCTTAGGAGTACTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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3UTR CAA 72 bp | CTAAACACTTTAAAGTGTAACTCTAGGCTTACAGTGTaGAATTCCATCATGGGCTTGATTTTTCCCCCTAGT | + |
Preference number: 4 (lower is better) Translates to: LNTLKCNSRLTV*NSIMGLIFPPS Trigger: ACTAGGGGGAAAAATCAAGCCCATGATGGAATTCAACACTGTAAGCCTAGAGTTACACTTTAAAGTGTTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | CATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCCCACGGCTGATTTTTGAATaGCTTCTGCTAATTCTTGGT | + |
Preference number: 4 (lower is better) Translates to: HENKKLCMHTLPIHLKGPRLIFE*LLLILG Trigger: ACCAAGAATTAGCAGAAGCCATTCAAAAATCAGCCG...TGGGCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CCA 90 bp | ATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTCTTTTGATGACTTATaGAAAGGCATGGCTAGACTC | + |
Preference number: 4 (lower is better) Translates to: IHHRHENKKLCMHTLPIHSFDDL*KGMARL Trigger: GAGTCTAGCCATGCCTTTCCATAAGTCATCAAAAGA...ATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACGATGATGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR GCA 90 bp | TATGCTATACACAAAACCATCTGCTTTATTCCAGAATACATCATCGTCATGAGAATCTTCTTCTATCTTTaGCTGAGCTTCGAGATCAAA | + |
Preference number: 4 (lower is better) Translates to: YAIHKTICFIPEYIIVMRIFFYL*LSFEIK Trigger: TTTGATCTCGAAGCTCAGGCAAAGATAGAAGAAGAT...TCTCATGACGATGATGTATTCTGGAATAAAGCAGATGGTTTTGTGTATAGCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 90 bp | GCGGCGGGGATGCCGGACTCGAGCTCGCACAGCGCGCGGAAGTTGTaGAGCTCGAAGTCGGCGTCGACCTGGAGGGAAAAGGTCACCTCG | + |
Preference number: 5 (lower is better) Translates to: AAGMPDSSSHSARKL*SSKSASTWREKVTS Trigger: CGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCATCCCCGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CCA 90 bp | CCAAGGGTGGGTTGCGCTCCTTCAGCAAGGACAACTCATGCGGGTTaGCCAGCAGCATGTCTCGGAGCAGGGCTGGGTTGTCTAGGCCTT | + |
Preference number: 5 (lower is better) Translates to: PRVGCAPSARTTHAG*PAACLGAGLGCLGL Trigger: AAGGCCTAGACAACCCAGCCCTGCTCCGAGACATGCTGCTGGCCAACCCGCATGAGTTGTCCTTGCTGAAGGAGCGCAACCCACCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CCA 90 bp | GAGAAGATGCCATTTCCCCAGGAGATGAGTGCTGAGCCTGGGTTCTaGGCAGCTGGCGCTGTTGGGGGTTTGACGTGCCAGGCACAGCTA | + |
Preference number: 5 (lower is better) Translates to: EKMPFPQEMSAEPGF*AAGAVGGLTCQAQL Trigger: TAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGCCAGCTGCCCAGAACCCAGGCTCAGCACTCATCTCCTGGGGAAATGGCATCTTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS TCA 90 bp | CTGAGTCGACAAAGGCTTTCACAGGATGCCCGTTCACTCTGCAGTTaGTGTACAGCATGGCGACCTGGCCGAAGCTCTCCGGGGCCTCCT | + |
Preference number: 5 (lower is better) Translates to: LSRQRLSQDARSLCS*CTAWRPGRSSPGPP Trigger: AGGAGGCCCCGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTGTCGACTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS TCA 90 bp | GCTGGCGCTGTTGGGGGTTTGACGTGCCAGGCACAGCTATGCTACTaGAGTCAATCCGGGGTAAGTTTGAGAACTGCACTGCAGGGCGAG | + |
Preference number: 5 (lower is better) Translates to: AGAVGGLTCQAQLCY*SQSGVSLRTALQGE Trigger: CTCGCCCTGCAGTGCAGTTCTCAAACTTACCCCGGATTGACTTCAGTAGCATAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CCA 90 bp | ACAGGATGCCCGTTCACTCTGCAGTTGATGTACAGCATGGCGACCTaGCCGAAGCTCTCCGGGGCCTCCTCCATAGCTATCGTCATGTTC | + |
Preference number: 5 (lower is better) Translates to: TGCPFTLQLMYSMAT*PKLSGASSIAIVMF Trigger: GAACATGACGATAGCTATGGAGGAGGCCCCGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CAA 90 bp | GAAGCTCAAGGTCTTCTGCGTCACAAAGACAGCCCTGGTCCTGTGGAACACTCTCAGACGAATCCGTTCTaGTTCTCTCCGGGCTCGGTC | + |
Preference number: 5 (lower is better) Translates to: EAQGLLRHKDSPGPVEHSQTNPF*FSPGSV Trigger: GACCGAGCCCGGAGAGAACAAGAACGGATTCGTCTG...AGAGTGTTCCACAGGACCAGGGCTGTCTTTGTGACGCAGAAGACCTTGAGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CAA 90 bp | AGTGATACACCAGACAGTTCGGCCACAGGTAGCAACGGGAATGCGCTGGGTGAACCGTTCACTCTGCAGTaGATGTACAGCATGGCGACC | + |
Preference number: 5 (lower is better) Translates to: SDTPDSSATGSNGNALGEPFTLQ*MYSMAT Trigger: GGTCGCCATGCTGTACATCAACTGCAGAGTGAACGG...TTCACCCAGCGCATTCCCGTTGCTACCTGTGGCCGAACTGTCTGGTGTATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS TCA 90 bp | CACCATCTTTTAAACCGTAAGAAGCCAGTGACCTGTGGTTGTCGGTaGGAGGCCTTTCTGCATAGACAATCTGGCTCTCGGCGGCGGGGA | + |
Preference number: 5 (lower is better) Translates to: HHLLNRKKPVTCGCR*EAFLHRQSGSRRRG Trigger: TCCCCGCCGCCGAGAGCCAGATTGTCTATGCAGAAAGGCCTCTCACCGACAACCACAGGTCACTGGCTTCTTACGGTTTAAAAGATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 90 bp | AACAGACGAATCCGTTCTTGTTCTCTCCGGGCTCGGTCCTGCTGCTaGTCCACCAAGACCCTAGAGAATTTCTCAAGATCTCCACTGAGC | + |
Preference number: 5 (lower is better) Translates to: NRRIRSCSLRARSCC*STKTLENFSRSPLS Trigger: GCTCAGTGGAGATCTTGAGAAATTCTCTAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGATTCGTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CAA 90 bp | CTGAGGAAAGAAAGGGATGAAGACTGCACCAAGGCCACTGTTGTCAGAACTTCCTGTGTGCCTACTCCTTaGGCAATGCCAGCCCACCGA | + |
Preference number: 5 (lower is better) Translates to: LRKERDEDCTKATVVRTSCVPTP*AMPAHR Trigger: TCGGTGGGCTGGCATTGCCAAAGGAGTAGGCACACA...GGAAGTTCTGACAACAGTGGCCTTGGTGCAGTCTTCATCCCTTTCTTTCCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS TCA 90 bp | CATGTCCAGACCCAGAAGCATGTCCATAGGCTGTTCTTCCAGAATTaGGAAGGAGCACGCCAGAAAATCGCCTTCAATCTGAACCTGAGC | + |
Preference number: 5 (lower is better) Translates to: HVQTQKHVHRLFFQN*EGARQKIAFNLNLS Trigger: GCTCAGGTTCAGATTGAAGGCGATTTTCTGGCGTGCTCCTTCTCAATTCTGGAAGAACAGCCTATGGACATGCTTCTGGGTCTGGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CAA 90 bp | AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCCACAGCGCGCGGAAGTaGTGCAGCTCGAAGTCGGCG | + |
Preference number: 5 (lower is better) Translates to: RFSTHCVCVCVVYLCEKGHSARK*CSSKSA Trigger: CGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTG...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CAA 90 bp | CAACATTTTGCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATGGCGCTGTTGGGGGTTaGACGTGCCAGGCACAGCTA | + |
Preference number: 5 (lower is better) Translates to: QHFACRFSTHCVCVCVVYGAVGG*TCQAQL Trigger: TAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGCC...ATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGCAAAATGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CAA 90 bp | AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCGACAACTCATGCGGGTaGGCCAGCAGCATGTCTCGG | + |
Preference number: 5 (lower is better) Translates to: RFSTHCVCVCVVYLCEKGDNSCG*ASSMSR Trigger: CCGAGACATGCTGCTGGCCAACCCGCATGAGTTGTC...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CAA 90 bp | GCTTGCAGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAGGACTGTGTGGGAGGTaGGTCCAATCCACTACGGGG | + |
Preference number: 5 (lower is better) Translates to: ACRFSTHCVCVCVVYLCEGLCGR*VQSTTG Trigger: CCCCGTAGTGGATTGGACCAACCTCCCACACAGTCC...TTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCTGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS TCA 90 bp | TTCTCCTCGATGTTCTGCTGCCTTATATCTTCTTCTATCTTTGCCTaGGCTTCGAGATCAAAGGGGTCAGCAGAAAACAGACGAATCCGT | + |
Preference number: 5 (lower is better) Translates to: FSSMFCCLISSSIFA*ASRSKGSAENRRIR Trigger: ACGGATTCGTCTGTTTTCTGCTGACCCCTTTGATCTCGAAGCTCAGGCAAAGATAGAAGAAGATATAAGGCAGCAGAACATCGAGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CAA 90 bp | CGTCATGAGAATAAAAAGCTTTGTATGCACACACTGCCAATACATTTAAAAGGCGCCAGTGACCTGTGGTaGTCGGTGAGAGGCCTTTCT | + |
Preference number: 5 (lower is better) Translates to: RHENKKLCMHTLPIHLKGASDLW*SVRGLS Trigger: AGAAAGGCCTCTCACCGACAACCACAGGTCACTGGC...GCCTTTTAAATGTATTGGCAGTGTGTGCATACAAAGCTTTTTATTCTCATGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 90 bp | CATGTTCTCCTCGATGTTCTGCTGCCTTATATCTTCTTCTATCTTTaGCTGAGCTTCGAGATCAAAGGGGTCAGCAGAAAACAGACGAAT | + |
Preference number: 5 (lower is better) Translates to: HVLLDVLLPYIFFYL*LSFEIKGVSRKQTN Trigger: ATTCGTCTGTTTTCTGCTGACCCCTTTGATCTCGAAGCTCAGGCAAAGATAGAAGAAGATATAAGGCAGCAGAACATCGAGGAGAACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS-3UTR CAA 90 bp | CTGCTTTATTCCAGAATACATCATCGTCATGAGAATAAAAAGCTTTGTATGCACTCCTGGCTGACTCTGTaGATCTGCGGACATCTTCTC | + |
Preference number: 5 (lower is better) Translates to: LLYSRIHHRHENKKLCMHSWLTL*ICGHLL Trigger: GAGAAGATGTCCGCAGATCAACAGAGTCAGCCAGGA...GTGCATACAAAGCTTTTTATTCTCATGACGATGATGTATTCTGGAATAAAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS-3UTR CAA 90 bp | AGATTTTCTACACATTGTGTGTGTGTGTGTGTAGTATATTTGTGTGAAAAGGGCAGAAGGGAAGAGGAATaGTCATCTTTGTTATCCATT | + |
Preference number: 5 (lower is better) Translates to: RFSTHCVCVCVVYLCEKGRREEE*SSLLSI Trigger: AATGGATAACAAAGATGACAATTCCTCTTCCCTTCT...GCCCTTTTCACACAAATATACTACACACACACACACACAATGTGTAGAAAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177592.2 |
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CDS CAA 90 bp | TCGGCGGCGGGGATGCCGGACTCGAGCTCGCACAGCGCGCGGAAGTaGTGCAGCTCGAAGTCGGCGTCGACCTGGAGGGAAAAGGTCACC | + |
Preference number: 6 (lower is better) Translates to: SAAGMPDSSSHSARK*CSSKSASTWREKVT Trigger: GGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCATCCCCGCCGCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CAA 72 bp | GGGATGCCGGACTCGAGCTCGCACAGCGCGCGGAAGTaGTGCAGCTCGAAGTCGGCGTCGACCTGGAGGGAA | + |
Preference number: 6 (lower is better) Translates to: GMPDSSSHSARK*CSSKSASTWRE Trigger: TTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCATCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 72 bp | ATGCCGGACTCGAGCTCGCACAGCGCGCGGAAGTTGTaGAGCTCGAAGTCGGCGTCGACCTGGAGGGAAAAG | + |
Preference number: 6 (lower is better) Translates to: MPDSSSHSARKL*SSKSASTWREK Trigger: CTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 72 bp | TTTCTGCATAGACAATCTGGCTCTCGGCGGCGGGGATaGCGGACTCGAGCTCGCACAGCGCGCGGAAGTTGT | + |
Preference number: 6 (lower is better) Translates to: FLHRQSGSRRRG*RTRARTARGSC Trigger: ACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGCATCCCCGCCGCCGAGAGCCAGATTGTCTATGCAGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CCA 72 bp | CCATTTCCCCAGGAGATGAGTGCTGAGCCTGGGTTCTaGGCAGCTGGCGCTGTTGGGGGTTTGACGTGCCAG | + |
Preference number: 6 (lower is better) Translates to: PFPQEMSAEPGF*AAGAVGGLTCQ Trigger: CTGGCACGTCAAACCCCCAACAGCGCCAGCTGCCCAGAACCCAGGCTCAGCACTCATCTCCTGGGGAAATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 72 bp | AAGGGTGGGTTGCGCTCCTTCAGCAAGGACAACTCATaGGGGTTGGCCAGCAGCATGTCTCGGAGCAGGGCT | + |
Preference number: 6 (lower is better) Translates to: KGGLRSFSKDNS*GLASSMSRSRA Trigger: AGCCCTGCTCCGAGACATGCTGCTGGCCAACCCGCATGAGTTGTCCTTGCTGAAGGAGCGCAACCCACCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CCA 72 bp | GGTTGCGCTCCTTCAGCAAGGACAACTCATGCGGGTTaGCCAGCAGCATGTCTCGGAGCAGGGCTGGGTTGT | + |
Preference number: 6 (lower is better) Translates to: GCAPSARTTHAG*PAACLGAGLGC Trigger: ACAACCCAGCCCTGCTCCGAGACATGCTGCTGGCCAACCCGCATGAGTTGTCCTTGCTGAAGGAGCGCAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CAA 90 bp | CCTGAGTCGACAAAGGCTTTCACAGGATGCCCGTTCACTCTGCAGTaGATGTACAGCATGGCGACCTGGCCGAAGCTCTCCGGGGCCTCC | + |
Preference number: 6 (lower is better) Translates to: PESTKAFTGCPFTLQ*MYSMATWPKLSGAS Trigger: GGAGGCCCCGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTGTCGACTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CCA 72 bp | CCGTTCACTCTGCAGTTGATGTACAGCATGGCGACCTaGCCGAAGCTCTCCGGGGCCTCCTCCATAGCTATC | + |
Preference number: 6 (lower is better) Translates to: PFTLQLMYSMAT*PKLSGASSIAI Trigger: GATAGCTATGGAGGAGGCCCCGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS TCA 72 bp | AGCCTGGGTTCTGGGCAGCTGGCGCTGTTGGGGGTTTaGCGTGCCAGGCACAGCTATGCTACTGAAGTCAAT | + |
Preference number: 6 (lower is better) Translates to: SLGSGQLALLGV*RARHSYATEVN Trigger: ATTGACTTCAGTAGCATAGCTGTGCCTGGCACGTCAAACCCCCAACAGCGCCAGCTGCCCAGAACCCAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS TCA 72 bp | CAAAGGCTTTCACAGGATGCCCGTTCACTCTGCAGTTaGTGTACAGCATGGCGACCTGGCCGAAGCTCTCCG | + |
Preference number: 6 (lower is better) Translates to: QRLSQDARSLCS*CTAWRPGRSSP Trigger: CGGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CAA 90 bp | AGCTTCGAGATCAAAGGGGTCAGCAGAAAACAGACGAATCCGTTCTaGTTCTCTCCGGGCTCGGTCCTGCTGCTGCTCCACCAAGACCCT | + |
Preference number: 6 (lower is better) Translates to: SFEIKGVSRKQTNPF*FSPGSVLLLLHQDP Trigger: AGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGATTCGTCTGTTTTCTGCTGACCCCTTTGATCTCGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CAA 72 bp | ATCAAAGGGGTCAGCAGAAAACAGACGAATCCGTTCTaGTTCTCTCCGGGCTCGGTCCTGCTGCTGCTCCAC | + |
Preference number: 6 (lower is better) Translates to: IKGVSRKQTNPF*FSPGSVLLLLH Trigger: GTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGATTCGTCTGTTTTCTGCTGACCCCTTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CAA 72 bp | ACAAAGGCTTTCACAGGATGCCCGTTCACTCTGCAGTaGATGTACAGCATGGCGACCTGGCCGAAGCTCTCC | + |
Preference number: 6 (lower is better) Translates to: TKAFTGCPFTLQ*MYSMATWPKLS Trigger: GGAGAGCTTCGGCCAGGTCGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 72 bp | AGACGAATCCGTTCTTGTTCTCTCCGGGCTCGGTCCTaGTGCTGCTCCACCAAGACCCTAGAGAATTTCTCA | + |
Preference number: 6 (lower is better) Translates to: RRIRSCSLRARS*CCSTKTLENFS Trigger: TGAGAAATTCTCTAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGATTCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 72 bp | ATCTGGGCTCCTGAGTCGACAAAGGCTTTCACAGGATaGCCGTTCACTCTGCAGTTGATGTACAGCATGGCG | + |
Preference number: 6 (lower is better) Translates to: IWAPESTKAFTG*PFTLQLMYSMA Trigger: CGCCATGCTGTACATCAACTGCAGAGTGAACGGGCATCCTGTGAAAGCCTTTGTCGACTCAGGAGCCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS TCA 72 bp | GTTGGGGGTTTGACGTGCCAGGCACAGCTATGCTACTaGAGTCAATCCGGGGTAAGTTTGAGAACTGCACTG | + |
Preference number: 6 (lower is better) Translates to: VGGLTCQAQLCY*SQSGVSLRTAL Trigger: CAGTGCAGTTCTCAAACTTACCCCGGATTGACTTCAGTAGCATAGCTGTGCCTGGCACGTCAAACCCCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 72 bp | ATCCGTTCTTGTTCTCTCCGGGCTCGGTCCTGCTGCTaGTCCACCAAGACCCTAGAGAATTTCTCAAGATCT | + |
Preference number: 6 (lower is better) Translates to: IRSCSLRARSCC*STKTLENFSRS Trigger: AGATCTTGAGAAATTCTCTAGGGTCTTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACAAGAACGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS TCA 72 bp | TTAAACCGTAAGAAGCCAGTGACCTGTGGTTGTCGGTaGGAGGCCTTTCTGCATAGACAATCTGGCTCTCGG | + |
Preference number: 6 (lower is better) Translates to: LNRKKPVTCGCR*EAFLHRQSGSR Trigger: CCGAGAGCCAGATTGTCTATGCAGAAAGGCCTCTCACCGACAACCACAGGTCACTGGCTTCTTACGGTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 72 bp | ATGCTACTGAAGTCAATCCGGGGTAAGTTTGAGAACTaGACTGCAGGGCGAGGGTCTGCATTCTCCTTCTGT | + |
Preference number: 6 (lower is better) Translates to: MLLKSIRGKFEN*TAGRGSAFSFC Trigger: ACAGAAGGAGAATGCAGACCCTCGCCCTGCAGTGCAGTTCTCAAACTTACCCCGGATTGACTTCAGTAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS TCA 72 bp | ACCCAGAAGCATGTCCATAGGCTGTTCTTCCAGAATTaGGAAGGAGCACGCCAGAAAATCGCCTTCAATCTG | + |
Preference number: 6 (lower is better) Translates to: TQKHVHRLFFQN*EGARQKIAFNL Trigger: CAGATTGAAGGCGATTTTCTGGCGTGCTCCTTCTCAATTCTGGAAGAACAGCCTATGGACATGCTTCTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS CCA 72 bp | GCTTCTGACGCTCTGCATCCTCGGCTGATTTTTGAATaGCTTCTGCTAATTCTTGGTCTGCAATTTCCTCTG | + |
Preference number: 6 (lower is better) Translates to: ASDALHPRLIFE*LLLILGLQFPL Trigger: CAGAGGAAATTGCAGACCAAGAATTAGCAGAAGCCATTCAAAAATCAGCCGAGGATGCAGAGCGTCAGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |
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CDS GCA 72 bp | CTCGATGTTCTGCTGCCTTATATCTTCTTCTATCTTTaGCTGAGCTTCGAGATCAAAGGGGTCAGCAGAAAA | + |
Preference number: 6 (lower is better) Translates to: LDVLLPYIFFYL*LSFEIKGVSRK Trigger: TTTTCTGCTGACCCCTTTGATCTCGAAGCTCAGGCAAAGATAGAAGAAGATATAAGGCAGCAGAACATCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102484.5 |