Pregenerated sensors for DDI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047619Ensembl transcript IDs: ENSMUST00000051706.6
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGTTGCAGTTAGTTGTGCACCACCTTCCACTGGCTGTGAGAACTaGGCTGGATCACCTGGAAGAGCAAAGAGCACTCTGACCACAGAT | + |
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Preference number: 1 (lower is better) Translates to: GVAVSCAPPSTGCEN*AGSPGRAKSTLTTD Trigger: ATCTGTGGTCAGAGTGCTCTTTGCTCTTCCAGGTGATCCAGCTCAGTTCTCACAGCCAGTGGAAGGTGGTGCACAACTAACTGCAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CCA 90 bp | TACCATACACAAAGGCATATGTTTGCTGTCAAGCAACACCAAATTTaGTGTGAGGCCCTTCTTGTACTCCTAGCACTCTCTCCGTATGTG | + |
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Preference number: 1 (lower is better) Translates to: YHTQRHMFAVKQHQI*CEALLVLLALSPYV Trigger: CACATACGGAGAGAGTGCTAGGAGTACAAGAAGGGCCTCACACCAAATTTGGTGTTGCTTGACAGCAAACATATGCCTTTGTGTATGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR TCA 90 bp | TCAAGATCTGAAAGGCCTCAGCACATATATTCAAGATGGCCTAACTaGAATCTTGAAATAGAAATCAGAGACCTGAACTATGGTTCACGC | + |
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Preference number: 1 (lower is better) Translates to: SRSERPQHIYSRWPN*NLEIEIRDLNYGSR Trigger: GCGTGAACCATAGTTCAGGTCTCTGATTTCTATTTCAAGATTTCAGTTAGGCCATCTTGAATATATGTGCTGAGGCCTTTCAGATCTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR TCA 90 bp | GCACTGGGTCCCCAGGAGCTGGAGTTGCAGTTAGTTGTGCACCACCTTCCACTGGTTGGGAAGCCAACTTaGAGCTCCGCACTGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ALGPQELELQLVVHHLPLVGKPT*SSALSP Trigger: AGGGGACAGTGCGGAGCTTCAAGTTGGCTTCCCAAC...CAGTGGAAGGTGGTGCACAACTAACTGCAACTCCAGCTCCTGGGGACCCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CCA 90 bp | GATGGTTCATACCAGAGCTCAGGTGAGGATTTCAGATCACAAGCTGTAGAGGTGTACAGAAGGGAGCACTaGGTCCCCAGGAGCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: DGSYQSSGEDFRSQAVEVYRREH*VPRSWS Trigger: ACTCCAGCTCCTGGGGACCCAGTGCTCCCTTCTGTA...CACCTCTACAGCTTGTGATCTGAAATCCTCACCTGAGCTCTGGTATGAACCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR TCA 90 bp | GATGGTTCATACCAGAGCTCAGGTGAGGATTTCAGATCACAAGCTGTAGAGGTGACCTTCCACTGGCTGTaGGAACTGAGCTGGATCACC | + |
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Preference number: 2 (lower is better) Translates to: DGSYQSSGEDFRSQAVEVTFHWL*ELSWIT Trigger: GGTGATCCAGCTCAGTTCTCACAGCCAGTGGAAGGT...CACCTCTACAGCTTGTGATCTGAAATCCTCACCTGAGCTCTGGTATGAACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CCA 90 bp | GCACTGGGTCCCCAGGAGCTGGAGTTGCAGTTAGTTGTGCACCACCTTCCACTGGGCTTTGTTTCCTTGTaGCAGTGGCATAATTATGTA | + |
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Preference number: 2 (lower is better) Translates to: ALGPQELELQLVVHHLPLGFVSL*QWHNYV Trigger: TACATAATTATGCCACTGCCACAAGGAAACAAAGCC...CAGTGGAAGGTGGTGCACAACTAACTGCAACTCCAGCTCCTGGGGACCCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCCTGCCTATAAAGCAGCTCAATGAGGATAAGTGTAACCCTAAAGTAGGTCTCCGCACTGTCCCCTaGATGGGGTTCAGTGATCTG | + |
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Preference number: 2 (lower is better) Translates to: AALPIKQLNEDKCNPKVGLRTVP*MGFSDL Trigger: CAGATCACTGAACCCCATCCAGGGGACAGTGCGGAG...ACCTACTTTAGGGTTACACTTATCCTCATTGAGCTGCTTTATAGGCAGGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGGATTTCAGATCACAAGCTGTAGAGGTGAGGTATGTCCTACCATGTAGTTGGGGTTCAGTGATCTaGGTGAAGAAATGGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: GEDFRSQAVEVRYVLPCSWGSVI*VKKWAH Trigger: GTGGGCCCATTTCTTCACTCAGATCACTGAACCCCA...ACTACATGGTAGGACATACCTCACCTCTACAGCTTGTGATCTGAAATCCTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCTGGATCACCTGGAAGAGCAAAGAGCACTCTGACCACAGATTTTTCTCTCACTCTCTCCGTATGTaGAAGCAGCAGAATCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSWITWKSKEHSDHRFFSHSLRM*KQQNQE Trigger: TTCCTGATTCTGCTGCTTCCACATACGGAGAGAGTG...AGAGAAAAATCTGTGGTCAGAGTGCTCTTTGCTCTTCCAGGTGATCCAGCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR GCA 90 bp | TGTACTCCTAGCACTCTCTCCGTATGTGGAAGCAGCAGAATCAGGAATATAAGGAGGTTCCAGGTTCTGTaGGAGAACTTGTCTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: CTPSTLSVCGSSRIRNIRRFQVL*ENLSQK Trigger: CTTTTGAGACAAGTTCTCGCACAGAACCTGGAACCT...CCTTATATTCCTGATTCTGCTGCTTCCACATACGGAGAGAGTGCTAGGAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CCA 90 bp | GATGGTTCATACCAGAGCTCAGGTGAGGATTTCAGATCACAAGCTGTAGAGGTGAAGCAACACCAAATTTaGTGTGAGGCCCTTCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: DGSYQSSGEDFRSQAVEVKQHQI*CEALLV Trigger: TACAAGAAGGGCCTCACACCAAATTTGGTGTTGCTT...CACCTCTACAGCTTGTGATCTGAAATCCTCACCTGAGCTCTGGTATGAACCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CAA 90 bp | GATACAGGGGATGCTGATGGTATGGCTCAATTAGTAAAATGCCTTTaGCAGGAACACAAGGACCTAGGTTTCATCTCTATCACTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: DTGDADGMAQLVKCL*QEHKDLGFISITHV Trigger: CACATGAGTGATAGAGATGAAACCTAGGTCCTTGTGTTCCTGCAAAAGGCATTTTACTAATTGAGCCATACCATCAGCATCCCCTGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAAGCCCATCACCATACAGACCAAGAACTTCTAGAATTAAGATGAAAAAGATCTCTGCCCTGTGTTaGGGGAGAGACACATACACA | + |
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Preference number: 2 (lower is better) Translates to: LPSPSPYRPRTSRIKMKKISALC*GRDTYT Trigger: TGTGTATGTGTCTCTCCCTCAACACAGGGCAGAGAT...CTTTTTCATCTTAATTCTAGAAGTTCTTGGTCTGTATGGTGATGGGCTTGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR TCA 90 bp | CATTTATTTTTAAATAACCTCCTGGTAGGGATGGTTCATACCAGAGCTCAGGTGGAGCAAAGAGCACTCTaGCCACAGATTTTTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: HLFLNNLLVGMVHTRAQVEQRAL*PQIFLC Trigger: GCAGAGAAAAATCTGTGGTCAGAGTGCTCTTTGCTC...CACCTGAGCTCTGGTATGAACCATCCCTACCAGGAGGTTATTTAAAAATAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR GCA 90 bp | GATGGTTCATACCAGAGCTCAGGTGAGGATTTCAGATCACAAGCTGTAGAGGTGACAAAGGCATATGTTTaGTGTCAAGCAACACCAAAT | + |
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Preference number: 2 (lower is better) Translates to: DGSYQSSGEDFRSQAVEVTKAYV*CQATPN Trigger: ATTTGGTGTTGCTTGACAGCAAACATATGCCTTTGT...CACCTCTACAGCTTGTGATCTGAAATCCTCACCTGAGCTCTGGTATGAACCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR GCA 90 bp | CATTTATTTTTAAATAACCTCCTGGTAGGGATGGTTCATACCAGAGCTCAGGTGCCACAGATTTTTCTCTaGAGCCCTCTAATATCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HLFLNNLLVGMVHTRAQVPQIFL*SPLISL Trigger: GAGGGATATTAGAGGGCTGCAGAGAAAAATCTGTGG...CACCTGAGCTCTGGTATGAACCATCCCTACCAGGAGGTTATTTAAAAATAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CAA 90 bp | CACCCATCTGTGAACTCAGTCACAAGGCCAGGGTTGGTTGCTAAATaGTTTTTAATGATGACTTTGCCAGTGAGCTCATGTCTTATAATT | + |
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Preference number: 2 (lower is better) Translates to: HPSVNSVTRPGLVAK*FLMMTLPVSSCLII Trigger: AATTATAAGACATGAGCTCACTGGCAAAGTCATCATTAAAAACAATTTAGCAACCAACCCTGGCCTTGTGACTGAGTTCACAGATGGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGGTATTTCAGGCTAGAACTAAGTCAAAGGGCTTCTACTTTCCAGCATTAAAATTTCTCAATCTCTaGCCTGTGTTGAGGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SQVFQARTKSKGFYFPALKFLNL*PVLRER Trigger: TCTCTCCCTCAACACAGGGCAGAGATTGAGAAATTT...TAATGCTGGAAAGTAGAAGCCCTTTGACTTAGTTCTAGCCTGAAATACCTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGGTATTTCAGGCTAGAACTAAGTCAAAGGGCTTCTACTTTCCAGCATTATTTCTCCTAGATTGTTaGGAAGCCAACTTGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SQVFQARTKSKGFYFPALFLLDC*EANLKL Trigger: GAGCTTCAAGTTGGCTTCCCAACAATCTAGGAGAAA...TAATGCTGGAAAGTAGAAGCCCTTTGACTTAGTTCTAGCCTGAAATACCTGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGGTATTTCAGGCTAGAACTAAGTCAAAGGGCTTCTACTTTCCAGCATTAGTTTCCTTGTGGCAGTaGCATAATTATGTAAGACCT | + |
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Preference number: 2 (lower is better) Translates to: SQVFQARTKSKGFYFPALVSLWQ*HNYVRP Trigger: AGGTCTTACATAATTATGCCACTGCCACAAGGAAAC...TAATGCTGGAAAGTAGAAGCCCTTTGACTTAGTTCTAGCCTGAAATACCTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGTGGAATGCTTGTCTACCATACACAAAGGCATATGTTTGCTGTCAAGCAGCTCAATTAGTAAAATaGCTTTTGCAGGAACACAAG | + |
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Preference number: 2 (lower is better) Translates to: IWWNACLPYTKAYVCCQAAQLVK*LLQEHK Trigger: CTTGTGTTCCTGCAAAAGGCATTTTACTAATTGAGC...TGCTTGACAGCAAACATATGCCTTTGTGTATGGTAGACAAGCATTCCACCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CAA 90 bp | GCAGGAAATGTTAGAAAAGTGGGCTTGAGAACACTGGAGGTAAGTTaGTGTTTAGAAAGAAAATATCAGTATCACCAAGAGTCAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: AGNVRKVGLRTLEVS*CLERKYQYHQESNQ Trigger: TTGGTTTGACTCTTGGTGATACTGATATTTTCTTTCTAAACACAAACTTACCTCCAGTGTTCTCAAGCCCACTTTTCTAACATTTCCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGGAGCACTGGGTCCCCAGGAGCTGGAGTTGCAGTTAGTTGTGCACCACCTTAATCTCTGCCCTGTGTaGAGGGAGAGACACATACAC | + |
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Preference number: 3 (lower is better) Translates to: KGALGPQELELQLVVHHLNLCPV*RERHIH Trigger: GTGTATGTGTCTCTCCCTCAACACAGGGCAGAGATT...AAGGTGGTGCACAACTAACTGCAACTCCAGCTCCTGGGGACCCAGTGCTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CCA 72 bp | TGTTGGGAAGCCAACTTGAAGCTCCGCACTGTCCCCTaGATGGGGTTCAGTGATCTGAGTGAAGAAATGGGC | + |
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Preference number: 3 (lower is better) Translates to: CWEANLKLRTVP*MGFSDLSEEMG Trigger: GCCCATTTCTTCACTCAGATCACTGAACCCCATCCAGGGGACAGTGCGGAGCTTCAAGTTGGCTTCCCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR TCA 72 bp | GTTAGTTGTGCACCACCTTCCACTGGCTGTGAGAACTaGGCTGGATCACCTGGAAGAGCAAAGAGCACTCTG | + |
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Preference number: 3 (lower is better) Translates to: VSCAPPSTGCEN*AGSPGRAKSTL Trigger: CAGAGTGCTCTTTGCTCTTCCAGGTGATCCAGCTCAGTTCTCACAGCCAGTGGAAGGTGGTGCACAACTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CAA 90 bp | GGTGAGGATTTCAGATCACAAGCTGTAGAGGTGAGGTATGTCCTACCATGTAGTCTGAAGCCTGAGGCTTaGTTTCCTTGTGGCAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: GEDFRSQAVEVRYVLPCSLKPEA*FPCGSG Trigger: GCCACTGCCACAAGGAAACAAAGCCTCAGGCTTCAG...ACTACATGGTAGGACATACCTCACCTCTACAGCTTGTGATCTGAAATCCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR TCA 72 bp | ATGACTTTGCCAGTGAGCTCATGTCTTATAATTTCCTaGAGCCTGAGGCTTTGTTTCCTTGTGGCAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: MTLPVSSCLIIS*SLRLCFLVAVA Trigger: TGCCACTGCCACAAGGAAACAAAGCCTCAGGCTTCAGGAAATTATAAGACATGAGCTCACTGGCAAAGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR TCA 72 bp | TCACACTGTCCCTTGCTTCTGACAGCCTCTGGAAGCTaGAGTATTAGTCTCAGGTATTTCAGGCTAGAACTA | + |
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Preference number: 3 (lower is better) Translates to: SHCPLLLTASGS*SISLRYFRLEL Trigger: TAGTTCTAGCCTGAAATACCTGAGACTAATACTTCAGCTTCCAGAGGCTGTCAGAAGCAAGGGACAGTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CCA 72 bp | CAAAGGCATATGTTTGCTGTCAAGCAACACCAAATTTaGTGTGAGGCCCTTCTTGTACTCCTAGCACTCTCT | + |
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Preference number: 3 (lower is better) Translates to: QRHMFAVKQHQI*CEALLVLLALS Trigger: AGAGAGTGCTAGGAGTACAAGAAGGGCCTCACACCAAATTTGGTGTTGCTTGACAGCAAACATATGCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR TCA 72 bp | TCTAATATCCCTCTTAATCACACTGTCCCTTGCTTCTaGCAGCCTCTGGAAGCTGAAGTATTAGTCTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: SNIPLNHTVPCF*QPLEAEVLVSG Trigger: ACCTGAGACTAATACTTCAGCTTCCAGAGGCTGTCAGAAGCAAGGGACAGTGTGATTAAGAGGGATATTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CAA 90 bp | GAGCAAAGATCAAAAGGCCATCTGTCCATGGAACTTTTAACAGTTCTGCTGTGTGTTAGAAAAGTGGGCTaGAGAACACTGGAGGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: EQRSKGHLSMELLTVLLCVRKVG*RTLEVS Trigger: ACTTACCTCCAGTGTTCTCAAGCCCACTTTTCTAAC...ACACAGCAGAACTGTTAAAAGTTCCATGGACAGATGGCCTTTTGATCTTTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CAA 90 bp | GCAGCCCTGCCTATAAAGCAGCTCAATGAGGATAAGTGTAACCCTAAAGTAGGTTTTTTAATGATGACTTaGCCAGTGAGCTCATGTCTT | + |
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Preference number: 3 (lower is better) Translates to: AALPIKQLNEDKCNPKVGFLMMT*PVSSCL Trigger: AAGACATGAGCTCACTGGCAAAGTCATCATTAAAAA...ACCTACTTTAGGGTTACACTTATCCTCATTGAGCTGCTTTATAGGCAGGGCTGC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCCAAGCCCATCACCATACAGACCAAGAACTTCTAGAATTAAGATGAAAAAGGTCACAAGGCCAGGGTaGGTTGCTAAATTGTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: LPSPSPYRPRTSRIKMKKVTRPG*VAKLFL Trigger: TAAAAACAATTTAGCAACCAACCCTGGCCTTGTGAC...CTTTTTCATCTTAATTCTAGAAGTTCTTGGTCTGTATGGTGATGGGCTTGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGGTATTTCAGGCTAGAACTAAGTCAAAGGGCTTCTACTTTCCAGCATTAAAGTGTATAACTTATTaGGTGGAATGCTTGTCTACC | + |
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Preference number: 3 (lower is better) Translates to: SQVFQARTKSKGFYFPALKCITY*VECLST Trigger: GGTAGACAAGCATTCCACCAAATAAGTTATACACTT...TAATGCTGGAAAGTAGAAGCCCTTTGACTTAGTTCTAGCCTGAAATACCTGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR TCA 72 bp | AAGAAGCTAGACTTGGTGGTAAGCACCTTTAAACACTaGGTCATCTCTTTGGACCTAATTGTCTTCTATTTG | + |
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Preference number: 3 (lower is better) Translates to: KKLDLVVSTFKH*VISLDLIVFYL Trigger: CAAATAGAAGACAATTAGGTCCAAAGAGATGACTCAGTGTTTAAAGGTGCTTACCACCAAGTCTAGCTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR TCA 72 bp | GAAAGGCCTCAGCACATATATTCAAGATGGCCTAACTaGAATCTTGAAATAGAAATCAGAGACCTGAACTAT | + |
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Preference number: 3 (lower is better) Translates to: ERPQHIYSRWPN*NLEIEIRDLNY Trigger: ATAGTTCAGGTCTCTGATTTCTATTTCAAGATTTCAGTTAGGCCATCTTGAATATATGTGCTGAGGCCTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR GCA 72 bp | AGTAATTTGAGTAAGTGTATAACTTATTTGGTGGAATaGTTGTCTACCATACACAAAGGCATATGTTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SNLSKCITYLVE*LSTIHKGICLL Trigger: CAGCAAACATATGCCTTTGTGTATGGTAGACAAGCATTCCACCAAATAAGTTATACACTTACTCAAATTACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | GCACTGGGTCCCCAGGAGCTGGAGTTGCAGTTAGTTGTGCACCACCTTCCACTGCCGACCCAGACCCAGTaGAATCTGCTCGAGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: ALGPQELELQLVVHHLPLPTQTQ*NLLEDG Trigger: ACCATCCTCGAGCAGATTTCACTGGGTCTGGGTCGG...CAGTGGAAGGTGGTGCACAACTAACTGCAACTCCAGCTCCTGGGGACCCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CAA 72 bp | GTACAGAAGGGAGCACTGGGTCCCCAGGAGCTGGAGTaGCAGTTAGTTGTGCACCACCTTCCACTGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VQKGALGPQELE*QLVVHHLPLAV Trigger: CACAGCCAGTGGAAGGTGGTGCACAACTAACTGCAACTCCAGCTCCTGGGGACCCAGTGCTCCCTTCTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | AAGGGAGCACTGGGTCCCCAGGAGCTGGAGTTGCAGTTAGTTGTGCACCACCTTCCAACATTATCCTTCTaGAGAAGTACAACCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: KGALGPQELELQLVVHHLPTLSF*RSTTMS Trigger: TGACATGGTTGTACTTCTTCAGAAGGATAATGTTGG...AAGGTGGTGCACAACTAACTGCAACTCCAGCTCCTGGGGACCCAGTGCTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | TGTACTCCTAGCACTCTCTCCGTATGTGGAAGCAGCAGAATCAGGAATATAAGGCCTTCAGGAAGGAAGTaGGTCTGTGAGCCGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: CTPSTLSVCGSSRIRNIRPSGRK*VCEPVV Trigger: CACTACCGGCTCACAGACTCACTTCCTTCCTGAAGG...CCTTATATTCCTGATTCTGCTGCTTCCACATACGGAGAGAGTGCTAGGAGTACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | ATCCAAATTTCTCAATCTCTGCCCTGTGTTGAGGGAGAGACACATACACAGACAGAGCCCAGGGAGCAGTaGTCATCTGTGAGGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: IQISQSLPCVEGETHTQTEPREQ*SSVRSC Trigger: ACAGCTCCTCACAGATGACCACTGCTCCCTGGGCTC...TGTCTGTGTATGTGTCTCTCCCTCAACACAGGGCAGAGATTGAGAAATTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | GCAGCCCTGCCTATAAAGCAGCTCAATGAGGATAAGTGTAACCCTAAAGTAGGTAAAAGGTTACCTCTGTaGGGTCCCTACGCACACAAT | + |
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Preference number: 4 (lower is better) Translates to: AALPIKQLNEDKCNPKVGKRLPL*GPYAHN Trigger: ATTGTGTGCGTAGGGACCTCACAGAGGTAACCTTTT...ACCTACTTTAGGGTTACACTTATCCTCATTGAGCTGCTTTATAGGCAGGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | TTAAGAAAGTTATCCAAATTTCTCAATCTCTGCCCTGTGTTGAGGGAGAGACACTGCTCGAGGATGGTTTaGAGTCCTTCCTGGAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LRKLSKFLNLCPVLRERHCSRMV*SPSWSP Trigger: CGGACTCCAGGAAGGACTCCAAACCATCCTCGAGCA...GTGTCTCTCCCTCAACACAGGGCAGAGATTGAGAAATTTGGATAACTTTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | GGTGAGGATTTCAGATCACAAGCTGTAGAGGTGAGGTATGTCCTACCATGTAGTAAATCTGCTCGAGGATaGTTTGGAGTCCTTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GEDFRSQAVEVRYVLPCSKSARG*FGVLPG Trigger: TCCAGGAAGGACTCCAAACCATCCTCGAGCAGATTT...ACTACATGGTAGGACATACCTCACCTCTACAGCTTGTGATCTGAAATCCTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | GGTGAGGATTTCAGATCACAAGCTGTAGAGGTGAGGTATGTCCTACCATGTAGTACAGATCATGGGGGTTaGAAAGCAGCATGCTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: GEDFRSQAVEVRYVLPCSTDHGG*KAACFE Trigger: TTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGT...ACTACATGGTAGGACATACCTCACCTCTACAGCTTGTGATCTGAAATCCTCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | TGTACTCCTAGCACTCTCTCCGTATGTGGAAGCAGCAGAATCAGGAATATAAGGCTCTCAGCACAAGCTTaGCTCATGATAGTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: CTPSTLSVCGSSRIRNIRLSAQA*LMIVIW Trigger: CCAGATGACTATCATGAGCCAAGCTTGTGCTGAGAG...CCTTATATTCCTGATTCTGCTGCTTCCACATACGGAGAGAGTGCTAGGAGTACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | CTTCCAAGCCCATCACCATACAGACCAAGAACTTCTAGAATTAAGATGAAAAAGCCATGTCACCATCTTTaGGTCCATAGGAGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LPSPSPYRPRTSRIKMKKPCHHL*VHRSPG Trigger: CCCTGGGCTCCTATGGACTCAAAGATGGTGACATGG...CTTTTTCATCTTAATTCTAGAAGTTCTTGGTCTGTATGGTGATGGGCTTGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | GCAGCCCTGCCTATAAAGCAGCTCAATGAGGATAAGTGTAACCCTAAAGTAGGTTCCTACTTCCCTGTCTaGAGACTCTTCTTGTACAGT | + |
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Preference number: 4 (lower is better) Translates to: AALPIKQLNEDKCNPKVGSYFPV*RLFLYS Trigger: ACTGTACAAGAAGAGTCTTCAGACAGGGAAGTAGGA...ACCTACTTTAGGGTTACACTTATCCTCATTGAGCTGCTTTATAGGCAGGGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | GAGCAAAGATCAAAAGGCCATCTGTCCATGGAACTTTTAACAGTTCTGCTGTGTAACAGGGACAGATCATaGGGGTTGGAAAGCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: EQRSKGHLSMELLTVLLCNRDRS*GLESSM Trigger: CATGCTGCTTTCCAACCCCCATGATCTGTCCCTGTT...ACACAGCAGAACTGTTAAAAGTTCCATGGACAGATGGCCTTTTGATCTTTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR GCA 90 bp | TTAAGAAAGTTATCCAAATTTCTCAATCTCTGCCCTGTGTTGAGGGAGAGACACTCGATGGAACACTGGTaGCTCCTGAGCATATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LRKLSKFLNLCPVLRERHSMEHW*LLSISS Trigger: GCTTGATATGCTCAGGAGGCACCAGTGTTCCATCGA...GTGTCTCTCCCTCAACACAGGGCAGAGATTGAGAAATTTGGATAACTTTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | TTAAGAAAGTTATCCAAATTTCTCAATCTCTGCCCTGTGTTGAGGGAGAGACACAGGTCGATGGAACACTaGTGCCTCCTGAGCATATCA | + |
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Preference number: 4 (lower is better) Translates to: LRKLSKFLNLCPVLRERHRSMEH*CLLSIS Trigger: TGATATGCTCAGGAGGCACCAGTGTTCCATCGACCT...GTGTCTCTCCCTCAACACAGGGCAGAGATTGAGAAATTTGGATAACTTTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CAA 72 bp | GCAACACTGGGAAGGTTCCAGGTTCTGTGCGAGAACTaGTCTCAAAAGCTAAGGTGGAAAGAGATTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: ATLGRFQVLCEN*SQKLRWKEIKK Trigger: TTTCTTAATCTCTTTCCACCTTAGCTTTTGAGACAAGTTCTCGCACAGAACCTGGAACCTTCCCAGTGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | TTAAGAAAGTTATCCAAATTTCTCAATCTCTGCCCTGTGTTGAGGGAGAGACACGCTCACAGAGGACTCTaGAGTTTGAGAGCTCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: LRKLSKFLNLCPVLRERHAHRGL*SLRAQS Trigger: ACTTTGAGCTCTCAAACTTCAGAGTCCTCTGTGAGC...GTGTCTCTCCCTCAACACAGGGCAGAGATTGAGAAATTTGGATAACTTTCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | TCTCAGGTATTTCAGGCTAGAACTAAGTCAAAGGGCTTCTACTTTCCAGCATTAAGCAGTGGTCATCTGTaGGGAGCTGTTCCATGTAAA | + |
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Preference number: 4 (lower is better) Translates to: SQVFQARTKSKGFYFPALSSGHL*GAVPCK Trigger: TTTACATGGAACAGCTCCTCACAGATGACCACTGCT...TAATGCTGGAAAGTAGAAGCCCTTTGACTTAGTTCTAGCCTGAAATACCTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | GAGCAAAGATCAAAAGGCCATCTGTCCATGGAACTTTTAACAGTTCTGCTGTGTTGCTCCATCAGGACCTaGGAAAATGTCTCAAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: EQRSKGHLSMELLTVLLCCSIRT*ENVSRF Trigger: AAACCTTGAGACATTTTCTCAGGTCCTGATGGAGCA...ACACAGCAGAACTGTTAAAAGTTCCATGGACAGATGGCCTTTTGATCTTTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR TCA 90 bp | CTTCCAAGCCCATCACCATACAGACCAAGAACTTCTAGAATTAAGATGAAAAAGGAGGACTCTGAAGTTTaGGAGCTCAAAGTCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LPSPSPYRPRTSRIKMKKEDSEV*ELKVRV Trigger: AACCCTGACTTTGAGCTCTCAAACTTCAGAGTCCTC...CTTTTTCATCTTAATTCTAGAAGTTCTTGGTCTGTATGGTGATGGGCTTGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGCCCATCACCATACAGACCAAGAACTTCTAGAATTAAGATGAAAAAGAAGTCAGGGTTGACCTaGAGGGAAAAGGTTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPSPSPYRPRTSRIKMKKKSGLT*REKVTS Trigger: AGAGGTAACCTTTTCCCTCCAGGTCAACCCTGACTT...CTTTTTCATCTTAATTCTAGAAGTTCTTGGTCTGTATGGTGATGGGCTTGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CAA 72 bp | AGTCTTAAAGATTTAAATGGCTTCTTTTCTAGGGACTaGGGCAAAATAAATCGACCTTGGCCTGGACATGCC | + |
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Preference number: 4 (lower is better) Translates to: SLKDLNGFFSRD*GKINRPWPGHA Trigger: GGCATGTCCAGGCCAAGGTCGATTTATTTTGCCCAAGTCCCTAGAAAAGAAGCCATTTAAATCTTTAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CAA 72 bp | GATGCTGATGGTATGGCTCAATTAGTAAAATGCCTTTaGCAGGAACACAAGGACCTAGGTTTCATCTCTATC | + |
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Preference number: 4 (lower is better) Translates to: DADGMAQLVKCL*QEHKDLGFISI Trigger: GATAGAGATGAAACCTAGGTCCTTGTGTTCCTGCAAAAGGCATTTTACTAATTGAGCCATACCATCAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGCCCATCACCATACAGACCAAGAACTTCTAGAATTAAGATGAAAAAGCTCATGATAGTCATCTaGGCACCAGAGTCAACAAAA | + |
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Preference number: 4 (lower is better) Translates to: LPSPSPYRPRTSRIKMKKLMIVI*APESTK Trigger: TTTTGTTGACTCTGGTGCCCAGATGACTATCATGAG...CTTTTTCATCTTAATTCTAGAAGTTCTTGGTCTGTATGGTGATGGGCTTGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CCA 90 bp | CATTTATTTTTAAATAACCTCCTGGTAGGGATGGTTCATACCAGAGCTCAGGTGAGTTTCCTGATCAAATaGGTTAGTAGAGTAAAGACG | + |
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Preference number: 4 (lower is better) Translates to: HLFLNNLLVGMVHTRAQVSFLIK*VSRVKT Trigger: CGTCTTTACTCTACTAACCCATTTGATCAGGAAACT...CACCTGAGCTCTGGTATGAACCATCCCTACCAGGAGGTTATTTAAAAATAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| 3UTR CAA 72 bp | AATTTGAGTAAGTGTATAACTTATTTGGTGGAATGCTaGTCTACCATACACAAAGGCATATGTTTGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: NLSKCITYLVEC*STIHKGICLLS Trigger: TGACAGCAAACATATGCCTTTGTGTATGGTAGACAAGCATTCCACCAAATAAGTTATACACTTACTCAAATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 90 bp | GTTCCAGGCACGGCCGACCCAGACCCAGTGAAATCTGCTCGAGGATaGTTTGGAGTCCTTCCTGGAGTCCGAAGTCCAACATTATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VPGTADPDPVKSARG*FGVLPGVRSPTLSF Trigger: GAAGGATAATGTTGGACTTCGGACTCCAGGAAGGACTCCAAACCATCCTCGAGCAGATTTCACTGGGTCTGGGTCGGCCGTGCCTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 90 bp | GCTTCAGCCAAAGCAGGATTCCGTTCCTTCAACAGGGACAGATCATaGGGGTTGGAAAGCAGCATGCTTCGAATCAGGGCAGGGCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: ASAKAGFRSFNRDRS*GLESSMLRIRAGLS Trigger: CGACAGCCCTGCCCTGATTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGTCCCTGTTGAAGGAACGGAATCCTGCTTTGGCTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 90 bp | AGGCACGGCCGACCCAGACCCAGTGAAATCTGCTCGAGGATGGTTTaGAGTCCTTCCTGGAGTCCGAAGTCCAACATTATCCTTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: RHGRPRPSEICSRMV*SPSWSPKSNIILLK Trigger: CTTCAGAAGGATAATGTTGGACTTCGGACTCCAGGAAGGACTCCAAACCATCCTCGAGCAGATTTCACTGGGTCTGGGTCGGCCGTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 90 bp | CCAAAGCAGGATTCCGTTCCTTCAACAGGGACAGATCATGGGGGTTaGAAAGCAGCATGCTTCGAATCAGGGCAGGGCTGTCGAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: PKQDSVPSTGTDHGG*KAACFESGQGCRVP Trigger: AGGAACTCGACAGCCCTGCCCTGATTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGTCCCTGTTGAAGGAACGGAATCCTGCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 90 bp | CCCAGACCCAGTGAAATCTGCTCGAGGATGGTTTGGAGTCCTTCCTaGAGTCCGAAGTCCAACATTATCCTTCTGAAGAAGTACAACCAT | + |
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Preference number: 5 (lower is better) Translates to: PRPSEICSRMVWSPS*SPKSNIILLKKYNH Trigger: ATGGTTGTACTTCTTCAGAAGGATAATGTTGGACTTCGGACTCCAGGAAGGACTCCAAACCATCCTCGAGCAGATTTCACTGGGTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CAA 90 bp | CTGAGCTGGATCACCTGGAAGAGCAAAGAGCACTCTGACCACAGATTTTTCTCTCCCTTGACAGGGTGTTaGATAGTACCTCCTACTTCC | + |
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Preference number: 5 (lower is better) Translates to: LSWITWKSKEHSDHRFFSPLTGC*IVPPTS Trigger: GGAAGTAGGAGGTACTATCAAACACCCTGTCAAGGG...AGAGAAAAATCTGTGGTCAGAGTGCTCTTTGCTCTTCCAGGTGATCCAGCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CAA 90 bp | TCTCAGGTATTTCAGGCTAGAACTAAGTCAAAGGGCTTCTACTTTCCAGCATTAGACAGATCATGGGGGTaGGAAAGCAGCATGCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: SQVFQARTKSKGFYFPALDRSWG*ESSMLR Trigger: TCGAAGCATGCTGCTTTCCAACCCCCATGATCTGTC...TAATGCTGGAAAGTAGAAGCCCTTTGACTTAGTTCTAGCCTGAAATACCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGATCAAAAGGCCATCTGTCCATGGAACTTTTAACAGTTCTGCTGTGTATAGAGCATAGCGACTaGTCCAAAACTCTCCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: EQRSKGHLSMELLTVLLCIEHSD*SKTLRS Trigger: GCTCCGGAGAGTTTTGGACAAGTCGCTATGCTCTAT...ACACAGCAGAACTGTTAAAAGTTCCATGGACAGATGGCCTTTTGATCTTTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CAA 90 bp | CATTTATTTTTAAATAACCTCCTGGTAGGGATGGTTCATACCAGAGCTCAGGTGTCTCTCAGCACAAGCTaGGCTCATGATAGTCATCTG | + |
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Preference number: 5 (lower is better) Translates to: HLFLNNLLVGMVHTRAQVSLSTS*AHDSHL Trigger: CAGATGACTATCATGAGCCAAGCTTGTGCTGAGAGA...CACCTGAGCTCTGGTATGAACCATCCCTACCAGGAGGTTATTTAAAAATAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CAA 90 bp | TTAAGAAAGTTATCCAAATTTCTCAATCTCTGCCCTGTGTTGAGGGAGAGACACAAGACGAAACATCTCTaGCTCTCTCAAGGTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LRKLSKFLNLCPVLRERHKTKHL*LSQGPF Trigger: GAAAGGACCTTGAGAGAGCAAGAGATGTTTCGTCTT...GTGTCTCTCCCTCAACACAGGGCAGAGATTGAGAAATTTGGATAACTTTCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGATCAAAAGGCCATCTGTCCATGGAACTTTTAACAGTTCTGCTGTGTGAAATCACCTTCAATTaGAATCTGAGCCAGATGAAC | + |
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Preference number: 5 (lower is better) Translates to: EQRSKGHLSMELLTVLLCEITFN*NLSQMN Trigger: GTTCATCTGGCTCAGATTCAAATTGAAGGTGATTTC...ACACAGCAGAACTGTTAAAAGTTCCATGGACAGATGGCCTTTTGATCTTTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS GCA 72 bp | TGTTCCAGGCACGGCCGACCCAGACCCAGTGAAATCTaGTCGAGGATGGTTTGGAGTCCTTCCTGGAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: CSRHGRPRPSEI*SRMVWSPSWSP Trigger: CGGACTCCAGGAAGGACTCCAAACCATCCTCGAGCAGATTTCACTGGGTCTGGGTCGGCCGTGCCTGGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 72 bp | ACGGCCGACCCAGACCCAGTGAAATCTGCTCGAGGATaGTTTGGAGTCCTTCCTGGAGTCCGAAGTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: TADPDPVKSARG*FGVLPGVRSPT Trigger: TGTTGGACTTCGGACTCCAGGAAGGACTCCAAACCATCCTCGAGCAGATTTCACTGGGTCTGGGTCGGCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CAA 90 bp | GCCAAAGCAGGATTCCGTTCCTTCAACAGGGACAGATCATGGGGGTaGGAAAGCAGCATGCTTCGAATCAGGGCAGGGCTGTCGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: AKAGFRSFNRDRSWG*ESSMLRIRAGLSSS Trigger: GGAACTCGACAGCCCTGCCCTGATTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGTCCCTGTTGAAGGAACGGAATCCTGCTTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS GCA 72 bp | TCAACAGGGACAGATCATGGGGGTTGGAAAGCAGCATaGTTCGAATCAGGGCAGGGCTGTCGAGTTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: STGTDHGGWKAA*FESGQGCRVPE Trigger: CTCAGGAACTCGACAGCCCTGCCCTGATTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGTCCCTGTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CAA 72 bp | GGATTCCGTTCCTTCAACAGGGACAGATCATGGGGGTaGGAAAGCAGCATGCTTCGAATCAGGGCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GFRSFNRDRSWG*ESSMLRIRAGL Trigger: CAGCCCTGCCCTGATTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGTCCCTGTTGAAGGAACGGAATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 72 bp | GATTCCGTTCCTTCAACAGGGACAGATCATGGGGGTTaGAAAGCAGCATGCTTCGAATCAGGGCAGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: DSVPSTGTDHGG*KAACFESGQGC Trigger: ACAGCCCTGCCCTGATTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGTCCCTGTTGAAGGAACGGAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 72 bp | CGACCCAGACCCAGTGAAATCTGCTCGAGGATGGTTTaGAGTCCTTCCTGGAGTCCGAAGTCCAACATTATC | + |
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Preference number: 6 (lower is better) Translates to: RPRPSEICSRMV*SPSWSPKSNII Trigger: GATAATGTTGGACTTCGGACTCCAGGAAGGACTCCAAACCATCCTCGAGCAGATTTCACTGGGTCTGGGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 72 bp | AAAGCAGGATTCCGTTCCTTCAACAGGGACAGATCATaGGGGTTGGAAAGCAGCATGCTTCGAATCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KAGFRSFNRDRS*GLESSMLRIRA Trigger: TGCCCTGATTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGTCCCTGTTGAAGGAACGGAATCCTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS TCA 72 bp | TATCCTTCTGAAGAAGTACAACCATGTCACCATCTTTaGGTCCATAGGAGCCCAGGGAGCAGTGGTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: YPSEEVQPCHHL*VHRSPGSSGHL Trigger: CAGATGACCACTGCTCCCTGGGCTCCTATGGACTCAAAGATGGTGACATGGTTGTACTTCTTCAGAAGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CAA 72 bp | CAATGCTTTTTACGTCCAGGACCCTTGACAGGGTGTTaGATAGTACCTCCTACTTCCCTGTCTGAAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: QCFLRPGPLTGC*IVPPTSLSEDS Trigger: AGAGTCTTCAGACAGGGAAGTAGGAGGTACTATCAAACACCCTGTCAAGGGTCCTGGACGTAAAAAGCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS TCA 72 bp | GTCCTTCCTGGAGTCCGAAGTCCAACATTATCCTTCTaGAGAAGTACAACCATGTCACCATCTTTGAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLPGVRSPTLSF*RSTTMSPSLSP Trigger: TGGACTCAAAGATGGTGACATGGTTGTACTTCTTCAGAAGGATAATGTTGGACTTCGGACTCCAGGAAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS TCA 72 bp | GACAGGGTGTTTGATAGTACCTCCTACTTCCCTGTCTaGAGACTCTTCTTGTACAGTTCCACTCAACAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: DRVFDSTSYFPV*RLFLYSSTQQF Trigger: AAACTGTTGAGTGGAACTGTACAAGAAGAGTCTTCAGACAGGGAAGTAGGAGGTACTATCAAACACCCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CAA 72 bp | TATTCTCTCCAGAGGCTAATCCGTGGGCTTGCTGTGTaGATGGTATACGTTGATGATGGTGATAATGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: YSLQRLIRGLAV*MVYVDDGDNGV Trigger: AACACCATTATCACCATCATCAACGTATACCATCAACACAGCAAGCCCACGGATTAGCCTCTGGAGAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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| CDS CCA 72 bp | TTCTTCTTCTATTCTAGCCTGAGTTTCCTGATCAAATaGGTTAGTAGAGTAAAGACGAAACATCTCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FFFYSSLSFLIK*VSRVKTKHLLL Trigger: GAGCAAGAGATGTTTCGTCTTTACTCTACTAACCCATTTGATCAGGAAACTCAGGCTAGAATAGAAGAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051706.6 |
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