Pregenerated sensors for DDC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020182Ensembl transcript IDs: ENSMUST00000066237.10, ENSMUST00000109659.9, ENSMUST00000155690.2, ENSMUST00000178704.8
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGGAAACTATTTCTATAAGCCTATCCTGCCACCAATGACCTTATaGGCACAAAGACATCTTATTATCAACAGAAGTCACGGCCACACA | + |
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Preference number: 1 (lower is better) Translates to: PGNYFYKPILPPMTL*AQRHLIINRSHGHT Trigger: TGTGTGGCCGTGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGGATAGGCTTATAGAAATAGTTTCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGCTTCTTTTCAACTTTTaGTCTCTGAAGCAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: QKLEPLTIAFHTENTFPWLLFNF*SLKQLC Trigger: GCAGAGCTGCTTCAGAGATCAAAAGTTGAAAAGAAG...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| 3UTR-3UTR TCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGCTTCTTTTCAACTTTTaGTCTCTGAAGCAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VTKKSVRGFWLMLETHMTLLFNF*SLKQLC Trigger: GCAGAGCTGCTTCAGAGATCAAAAGTTGAAAAGAAG...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGTCAGTCAGAGGTTTCTaGTTAATGTTGGAGACACAC | + |
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Preference number: 2 (lower is better) Translates to: QKLEPLTIAFHTENTFPWSVRGF*LMLETH Trigger: GTGTGTCTCCAACATTAACCAGAAACCTCTGACTGA...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGCTTCTTTTCAACTTTTaGTCTCTGAAGCAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TEARATDNSFPHRKYFSLLLFNF*SLKQLC Trigger: GCAGAGCTGCTTCAGAGATCAAAAGTTGAAAAGAAG...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACGGTTTCTGGTTAATGTaGGAGACACACATGACGCCA | + |
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Preference number: 3 (lower is better) Translates to: EARATDNSFPHRKYFSLDGFWLM*ETHMTP Trigger: TGGCGTCATGTGTGTCTCCAACATTAACCAGAAACC...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCAGGTTTCTGGTTAATGTaGGAGACACACATGACGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PATNDLMSTKTSYYQQKSGFWLM*ETHMTP Trigger: TGGCGTCATGTGTGTCTCCAACATTAACCAGAAACC...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGACTTCTTTTCAACTTTaGATCTCTGAAGCAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TEARATDNSFPHRKYFSLTSFQL*ISEAAL Trigger: CAGAGCTGCTTCAGAGATCAAAAGTTGAAAAGAAGT...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCAACTTCTTTTCAACTTTaGATCTCTGAAGCAGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: PATNDLMSTKTSYYQQKSTSFQL*ISEAAL Trigger: CAGAGCTGCTTCAGAGATCAAAAGTTGAAAAGAAGT...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| 3UTR TCA 72 bp | CTGGAAACTATTTCTATAAGCCTATCCTGCCACCAATaGCCTTATGAGCACAAAGACATCTTATTATCAACA | + |
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Preference number: 3 (lower is better) Translates to: LETISISLSCHQ*PYEHKDILLST Trigger: TGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGGATAGGCTTATAGAAATAGTTTCCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACCGGTCTCCAGCTCTGTaGACGCTGGGCTTGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDRSPAL*TLGLQP Trigger: GGGCTGCAAGCCCAGCGTGCACAGAGCTGGAGACCG...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGCGGTCTCCAGCTCTGTaGACGCTGGGCTTGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLMLETHMTRSPAL*TLGLQP Trigger: GGGCTGCAAGCCCAGCGTGCACAGAGCTGGAGACCG...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGCGGTCTCCAGCTCTGTaGACGCTGGGCTTGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLRSPAL*TLGLQP Trigger: GGGCTGCAAGCCCAGCGTGCACAGAGCTGGAGACCG...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACTGGAATCAGGCCAGCTaGCTTGTCCCGCTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDWNQAS*LVPLQG Trigger: GCCCTGGAGCGGGACAAGGCAGCTGGCCTGATTCCA...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGTGGAATCAGGCCAGCTaGCTTGTCCCGCTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLWNQAS*LVPLQG Trigger: GCCCTGGAGCGGGACAAGGCAGCTGGCCTGATTCCA...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGTGTTCCCAGGCCAGCTaGACGTGGGCAGACTCCACA | + |
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Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLMLETHMTCSQAS*TWADST Trigger: TGTGGAGTCTGCCCACGTGCAGCTGGCCTGGGAACA...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGTGTTCCCAGGCCAGCTaGACGTGGGCAGACTCCACA | + |
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Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWCSQAS*TWADST Trigger: TGTGGAGTCTGCCCACGTGCAGCTGGCCTGGGAACA...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGCAGCTCTGTGCACGCTaGGCTTGCAGCCCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWQLCAR*ACSPGE Trigger: TTCTCCTGGGCTGCAAGCCCAGCGTGCACAGAGCTG...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACCAGCTCTGTGCACGCTaGGCTTGCAGCCCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDQLCAR*ACSPGE Trigger: TTCTCCTGGGCTGCAAGCCCAGCGTGCACAGAGCTG...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGTGTTCCCAGGCCAGCTaGACGTGGGCAGACTCCACA | + |
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Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLCSQAS*TWADST Trigger: TGTGGAGTCTGCCCACGTGCAGCTGGCCTGGGAACA...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGCAGCTCTGTGCACGCTaGGCTTGCAGCCCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLQLCAR*ACSPGE Trigger: TTCTCCTGGGCTGCAAGCCCAGCGTGCACAGAGCTG...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACTCACTGGCACTTCCCTaGATCACTCCTCCCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDSLALP*ITPPPS Trigger: GGAAGGGGGAGGAGTGATCCAGGGAAGTGCCAGTGA...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGAGCTTGTGTGAACTCTaGGGAGGCTGCCTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWSLCEL*GGCLQL Trigger: CAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCT...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGAGCCACACACCCTCCTaGTTGCAGATGGGACCCACT | + |
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Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWSHTPS*LQMGPT Trigger: AGTGGGTCCCATCTGCAACCAGGAGGGTGTGTGGCT...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGAGCCACACACCCTCCTaGTTGCAGATGGGACCCACT | + |
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Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLMLETHMTSHTPS*LQMGPT Trigger: AGTGGGTCCCATCTGCAACCAGGAGGGTGTGTGGCT...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGTCTGGGGAGGCTGCCTaGAGCTGGCGGATAACTTTA | + |
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Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWSGEAA*SWRITL Trigger: TAAAGTTATCCGCCAGCTGCAGGCAGCCTCCCCAGA...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGTATGTTTCTGGCTCCTaGGGGGCAGTGGCAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLYVSGS*GAVAGI Trigger: GATCCCTGCCACTGCCCCCCAGGAGCCAGAAACATA...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGAGCCAAAAAGGCCTCTaGCAGCTCCAGCATCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLMLETHMTSQKGL*QLQHLP Trigger: GGGAAGATGCTGGAGCTGCCAGAGGCCTTTTTGGCT...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACATCACTGGCACTTCCCTaGATCACTCCTCCCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KLEPLTIAFHTENTFPWTSLALP*ITPPPS Trigger: GGAAGGGGGAGGAGTGATCCAGGGAAGTGCCAGTGA...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGCCAAGGTGGCTTCACTaGCACTTCCCTGGATCACTC | + |
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Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLMLETHMTPRWLH*HFPGSL Trigger: GAGTGATCCAGGGAAGTGCCAGTGAAGCCACCTTGG...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGAGCTTGTGTGAACTCTaGGGAGGCTGCCTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLSLCEL*GGCLQL Trigger: CAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCT...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR TCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACAAGCATAGCTGGGTATaGGCTAGCCGTGGGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDKHSWV*ASRGEV Trigger: TACTTCCCCACGGCTAGCTCATACCCAGCTATGCTT...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR TCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGGTCCTGGCGTACCAGTaGCTCAAACTCATGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWVLAYQ*LKLMRQ Trigger: CTGTCTCATGAGTTTGAGTCACTGGTACGCCAGGAC...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR TCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACTGCTTGCTAGATCACTaGTGTGTTCCCAGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDCLLDH*CVPRPA Trigger: AGCTGGCCTGGGAACACATCAGTGATCTAGCAAGCA...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR TCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGTGCTTGCTAGATCACTaGTGTGTTCCCAGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLMLETHMTCLLDH*CVPRPA Trigger: AGCTGGCCTGGGAACACATCAGTGATCTAGCAAGCA...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGTGTGCACGCTGGGCTTaGAGCCCAGGAGAAACCAAT | + |
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Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLCARWA*SPGETN Trigger: ATTGGTTTCTCCTGGGCTGCAAGCCCAGCGTGCACA...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACATGTGCACGCTGGGCTTaGAGCCCAGGAGAAACCAAT | + |
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Preference number: 4 (lower is better) Translates to: KLEPLTIAFHTENTFPWTCARWA*SPGETN Trigger: ATTGGTTTCTCCTGGGCTGCAAGCCCAGCGTGCACA...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR GCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGTCTGGGGAGGCTGCCTaGAGCTGGCGGATAACTTTA | + |
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Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLSGEAA*SWRITL Trigger: TAAAGTTATCCGCCAGCTGCAGGCAGCCTCCCCAGA...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACCACATCAGGGTACACTaGACGACCCTCAATGCCATC | + |
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Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDHIRVH*TTLNAI Trigger: GATGGCATTGAGGGTCGTCCAGTGTACCCTGATGTG...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCATATGTTTCTGGCTCCTaGGGGGCAGTGGCAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: PATNDLMSTKTSYYQQKSYVSGS*GAVAGI Trigger: GATCCCTGCCACTGCCCCCCAGGAGCCAGAAACATA...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGAGCCAAAAAGGCCTCTaGCAGCTCCAGCATCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLSQKGL*QLQHLP Trigger: GGGAAGATGCTGGAGCTGCCAGAGGCCTTTTTGGCT...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGCCAAGGTGGCTTCACTaGCACTTCCCTGGATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLPRWLH*HFPGSL Trigger: GAGTGATCCAGGGAAGTGCCAGTGAAGCCACCTTGG...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACTCAAAGCGAGGGTCCTaGCGTACCAGTGACTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDSKRGS*RTSDSN Trigger: GTTTGAGTCACTGGTACGCCAGGACCCTCGCTTTGA...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACAAAGCATAGCTGGGTATaGGCTAGCCGTGGGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLEPLTIAFHTENTFPWTKHSWV*ASRGEV Trigger: TACTTCCCCACGGCTAGCTCATACCCAGCTATGCTT...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGAAGCATAGCTGGGTATaGGCTAGCCGTGGGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLKHSWV*ASRGEV Trigger: TACTTCCCCACGGCTAGCTCATACCCAGCTATGCTT...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACAGTCCTGGCGTACCAGTaGCTCAAACTCATGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: KLEPLTIAFHTENTFPWTVLAYQ*LKLMRQ Trigger: CTGTCTCATGAGTTTGAGTCACTGGTACGCCAGGAC...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGTCCTGGCGTACCAGTaGCTCAAACTCATGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLVLAYQ*LKLMRQ Trigger: CTGTCTCATGAGTTTGAGTCACTGGTACGCCAGGAC...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR GCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGAATCCACCATCTCCTTaGCTCTCCTCCGGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLMLETHMTNPPSP*LSSGIH Trigger: GTGAATTCCGGAGGAGAGGCAAGGAGATGGTGGATT...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACACACATCAGGGTACACTaGACGACCCTCAATGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KLEPLTIAFHTENTFPWTHIRVH*TTLNAI Trigger: GATGGCATTGAGGGTCGTCCAGTGTACCCTGATGTG...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGCACATCAGGGTACACTaGACGACCCTCAATGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLHIRVH*TTLNAI Trigger: GATGGCATTGAGGGTCGTCCAGTGTACCCTGATGTG...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGGGGCAGAAGCTCTCATaGAAAAGTTGCCATCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWGQKLS*KSCHPK Trigger: CTTCGGATGGCAACTTTTCCATGAGAGCTTCTGCCC...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGGGGCAGAAGCTCTCATaGAAAAGTTGCCATCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLMLETHMTGQKLS*KSCHPK Trigger: CTTCGGATGGCAACTTTTCCATGAGAGCTTCTGCCC...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGAGCGACCACAAAGAATaGAATCAGGCCAGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWSDHKE*NQASCL Trigger: AAGGCAGCTGGCCTGATTCCATTCTTTGTGGTCGCT...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACATCAAAGCGAGGGTCCTaGCGTACCAGTGACTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLEPLTIAFHTENTFPWTSKRGS*RTSDSN Trigger: GTTTGAGTCACTGGTACGCCAGGACCCTCGCTTTGA...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGTCAGTGATGAATCCTaGGTCCTGGTGACTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLVSDES*VLVTVL Trigger: AAGCACAGTCACCAGGACTCAGGATTCATCACTGAC...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGAGTGACTCAAACTCATaGGACAGCTCCACGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWSDSNS*DSSTCF Trigger: AAAGCACGTGGAGCTGTCTCATGAGTTTGAGTCACT...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGAATCCACCATCTCCTTaGCTCTCCTCCGGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLNPPSP*LSSGIH Trigger: GTGAATTCCGGAGGAGAGGCAAGGAGATGGTGGATT...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACAAATCCACCATCTCCTTaGCTCTCCTCCGGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLEPLTIAFHTENTFPWTNPPSP*LSSGIH Trigger: GTGAATTCCGGAGGAGAGGCAAGGAGATGGTGGATT...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCATCAAAGCGAGGGTCCTaGCGTACCAGTGACTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PATNDLMSTKTSYYQQKSSKRGS*RTSDSN Trigger: GTTTGAGTCACTGGTACGCCAGGACCCTCGCTTTGA...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCAGTCAGTGATGAATCCTaGGTCCTGGTGACTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PATNDLMSTKTSYYQQKSVSDES*VLVTVL Trigger: AAGCACAGTCACCAGGACTCAGGATTCATCACTGAC...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACAAGTGACTCAAACTCATaGGACAGCTCCACGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLEPLTIAFHTENTFPWTSDSNS*DSSTCF Trigger: AAAGCACGTGGAGCTGTCTCATGAGTTTGAGTCACT...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCAAGCGACCACAAAGAATaGAATCAGGCCAGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PATNDLMSTKTSYYQQKSSDHKE*NQASCL Trigger: AAGGCAGCTGGCCTGATTCCATTCTTTGTGGTCGCT...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCAAGTGACTCAAACTCATaGGACAGCTCCACGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PATNDLMSTKTSYYQQKSSDSNS*DSSTCF Trigger: AAAGCACGTGGAGCTGTCTCATGAGTTTGAGTCACT...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACAGACCAACCCAAGAATaGCTTCTGTGCAAATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDRPTQE*LLCKFQ Trigger: TTGAAATTTGCACAGAAGTCATTCTTGGGTTGGTCT...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| 3UTR CAA 72 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTaGGAGACACACATGACGCCACATGTAATCATGATT | + |
|
Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLM*ETHMTPHVIMI Trigger: AATCATGATTACATGTGGCGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACAAGACCAACCCAAGAATaGCTTCTGTGCAAATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLEPLTIAFHTENTFPWTRPTQE*LLCKFQ Trigger: TTGAAATTTGCACAGAAGTCATTCTTGGGTTGGTCT...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGAAAGTTAAAGGAATCTaGAAACTCCACACCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKLEPLTIAFHTENTFPWKVKGI*KLHTIQ Trigger: CTGAATGGTGTGGAGTTTGCAGATTCCTTTAACTTT...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACAAAGTTAAAGGAATCTaGAAACTCCACACCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EARATDNSFPHRKYFSLDKVKGI*KLHTIQ Trigger: CTGAATGGTGTGGAGTTTGCAGATTCCTTTAACTTT...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGACCAAAAGCCACTTGTaGGGATTAAAGTTAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTKKSVRGFWLMLETHMTTKSHL*GLKLKE Trigger: TTCCTTTAACTTTAATCCCCACAAGTGGCTTTTGGT...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGACCAAAAGCCACTTGTaGGGATTAAAGTTAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEARATDNSFPHRKYFSLTKSHL*GLKLKE Trigger: TTCCTTTAACTTTAATCCCCACAAGTGGCTTTTGGT...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCAACCAAAAGCCACTTGTaGGGATTAAAGTTAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PATNDLMSTKTSYYQQKSTKSHL*GLKLKE Trigger: TTCCTTTAACTTTAATCCCCACAAGTGGCTTTTGGT...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS GCA 90 bp | TGTGGTCCCCAGTGTAGCGACCACAAAGAATGGAATCAGGCCAGCTaGCTTGTCCCGCTCCAGGGCTTCCCGAAGGGCAGAAGCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CGPQCSDHKEWNQAS*LVPLQGFPKGRSSH Trigger: ATGAGAGCTTCTGCCCTTCGGGAAGCCCTGGAGCGGGACAAGGCAGCTGGCCTGATTCCATTCTTTGTGGTCGCTACACTGGGGACCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
||
| CDS GCA 90 bp | CTCAGCACACTGCTTGCTAGATCACTGATGTGTTCCCAGGCCAGCTaGACGTGGGCAGACTCCACAGTGCGAGCGCACACAGCAAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSTLLARSLMCSQAS*TWADSTVRAHTAKR Trigger: ACGCTTTGCTGTGTGCGCTCGCACTGTGGAGTCTGCCCACGTGCAGCTGGCCTGGGAACACATCAGTGATCTAGCAAGCAGTGTGCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS CCA 90 bp | TCCATGATAGCAGCTTGTGTGAACTCTGGGGAGGCTGCCTGCAGCTaGCGGATAACTTTAGTCCGAGCAGCCAGTAGGGCCACCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SMIAACVNSGEAACS*RITLVRAASRATKV Trigger: CACCTTGGTGGCCCTACTGGCTGCTCGGACTAAAGTTATCCGCCAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCTGCTATCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
||
| CDS CCA 90 bp | ACACTGCTTGCTAGATCACTGATGTGTTCCCAGGCCAGCTGCACGTaGGCAGACTCCACAGTGCGAGCGCACACAGCAAAGCGTAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TLLARSLMCSQASCT*ADSTVRAHTAKRST Trigger: TGTGCTACGCTTTGCTGTGTGCGCTCGCACTGTGGAGTCTGCCCACGTGCAGCTGGCCTGGGAACACATCAGTGATCTAGCAAGCAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS GCA 90 bp | AGCTTTTCCATGATAGCAGCTTGTGTGAACTCTGGGGAGGCTGCCTaGAGCTGGCGGATAACTTTAGTCCGAGCAGCCAGTAGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SFSMIAACVNSGEAA*SWRITLVRAASRAT Trigger: GGTGGCCCTACTGGCTGCTCGGACTAAAGTTATCCGCCAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCTGCTATCATGGAAAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
||
| CDS GCA 90 bp | TGCCCGCGTAAGCAGCGTCAATGTGCAGCCACACACCCTCCTGGTTaGAGATGGGACCCACTTCCAGGAGATTGTCAAAAGAACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPRKQRQCAATHPPG*RWDPLPGDCQKNSR Trigger: CCTGCTGTTCTTTTGACAATCTCCTGGAAGTGGGTCCCATCTGCAACCAGGAGGGTGTGTGGCTGCACATTGACGCTGCTTACGCGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS CCA 90 bp | CTGCCTTGTCCCGCTCCAGGGCTTCCCGAAGGGCAGAAGCTCTCATaGAAAAGTTGCCATCCGAAGGGACTGCTTTTAGCTTTATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPCPAPGLPEGQKLS*KSCHPKGLLLALFH Trigger: GTGGAATAAAGCTAAAAGCAGTCCCTTCGGATGGCAACTTTTCCATGAGAGCTTCTGCCCTTCGGGAAGCCCTGGAGCGGGACAAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
||
| CDS CCA 90 bp | CGTAAGCAGCGTCAATGTGCAGCCACACACCCTCCTGGTTGCAGATaGGACCCACTTCCAGGAGATTGTCAAAAGAACAGCAGGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKQRQCAATHPPGCR*DPLPGDCQKNSRMW Trigger: CCACATCCTGCTGTTCTTTTGACAATCTCCTGGAAGTGGGTCCCATCTGCAACCAGGAGGGTGTGTGGCTGCACATTGACGCTGCTTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
||
| CDS TCA 90 bp | GCAGCCAATAGCACCACACAGCATGTCTGCAAGCATAGCTGGGTATaGGCTAGCCGTGGGGAAGTAAGCGAAGAAATAGGGACTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AANSTTQHVCKHSWV*ASRGEVSEEIGTVP Trigger: TGGCACAGTCCCTATTTCTTCGCTTACTTCCCCACGGCTAGCTCATACCCAGCTATGCTTGCAGACATGCTGTGTGGTGCTATTGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
||
| CDS CCA 90 bp | AGGGATCAGGGGCCGAAGATAGCCAGGCTCCACATCAGGGTACACTaGACGACCCTCAATGCCATCCAGATAGTCAGCTATATAATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RDQGPKIARLHIRVH*TTLNAIQIVSYIIH Trigger: GTGGATTATATAGCTGACTATCTGGATGGCATTGAGGGTCGTCCAGTGTACCCTGATGTGGAGCCTGGCTATCTTCGGCCCCTGATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
||
| CDS CCA 90 bp | TGTGTAAGCAACCAGCTTTTCCATGATAGCAGCTTGTGTGAACTCTaGGGAGGCTGCCTGCAGCTGGCGGATAACTTTAGTCCGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CVSNQLFHDSSLCEL*GGCLQLADNFSPSS Trigger: GCTGCTCGGACTAAAGTTATCCGCCAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCTGCTATCATGGAAAAGCTGGTTGCTTACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGATCAGGCCAGCTGCCTaGTCCCGCTCCAGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKLEPLTIAFHTENTFPWIRPAA*SRSRAS Trigger: GGAAGCCCTGGAGCGGGACAAGGCAGCTGGCCTGAT...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS GCA 90 bp | CCCGCTCCAGGGCTTCCCGAAGGGCAGAAGCTCTCATGGAAAAGTTaGCATCCGAAGGGACTGCTTTTAGCTTTATTCCACCAATTAACC | + |
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Preference number: 5 (lower is better) Translates to: PAPGLPEGQKLSWKS*HPKGLLLALFHQLT Trigger: GGTTAATTGGTGGAATAAAGCTAAAAGCAGTCCCTTCGGATGGCAACTTTTCCATGAGAGCTTCTGCCCTTCGGGAAGCCCTGGAGCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS-3UTR CAA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGATCAGGCCAGCTGCCTaGTCCCGCTCCAGGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: TEARATDNSFPHRKYFSLIRPAA*SRSRAS Trigger: GGAAGCCCTGGAGCGGGACAAGGCAGCTGGCCTGAT...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS TCA 90 bp | TCAACTCATTGGAGCCCTTTAGCCGGAAGCAGACCAACCCAAGAATaGCTTCTGTGCAAATTTCAAAGCGAGGGTCCTGGCGTACCAGTG | + |
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Preference number: 5 (lower is better) Translates to: STHWSPLAGSRPTQE*LLCKFQSEGPGVPV Trigger: CACTGGTACGCCAGGACCCTCGCTTTGAAATTTGCACAGAAGTCATTCTTGGGTTGGTCTGCTTCCGGCTAAAGGGCTCCAATGAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS GCA 90 bp | GAAGATAGCCAGGCTCCACATCAGGGTACACTGGACGACCCTCAATaGCATCCAGATAGTCAGCTATATAATCCACCATCTCCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EDSQAPHQGTLDDPQ*HPDSQLYNPPSPCL Trigger: GAGGCAAGGAGATGGTGGATTATATAGCTGACTATCTGGATGGCATTGAGGGTCGTCCAGTGTACCCTGATGTGGAGCCTGGCTATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS-3UTR CAA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCAATCAGGCCAGCTGCCTaGTCCCGCTCCAGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PATNDLMSTKTSYYQQKSIRPAA*SRSRAS Trigger: GGAAGCCCTGGAGCGGGACAAGGCAGCTGGCCTGAT...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS TCA 90 bp | AATGACTTCTGTGCAAATTTCAAAGCGAGGGTCCTGGCGTACCAGTaGCTCAAACTCATGAGACAGCTCCACGTGCTTTCGGATGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NDFCANFKARVLAYQ*LKLMRQLHVLSDVS Trigger: GCTTACATCCGAAAGCACGTGGAGCTGTCTCATGAGTTTGAGTCACTGGTACGCCAGGACCCTCGCTTTGAAATTTGCACAGAAGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CAA 90 bp | GAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACCCCACTTCCAGGAGATaGTCAAAAGAACAGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EARATDNSFPHRKYFSLDPTSRR*SKEQQD Trigger: ATCCTGCTGTTCTTTTGACAATCTCCTGGAAGTGGG...GTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CAA 90 bp | GTCACCAAAAAGTCAGTCAGAGGTTTCTGGTTAATGTTGGAGACACACATGACGCCCACTTCCAGGAGATaGTCAAAAGAACAGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: VTKKSVRGFWLMLETHMTPTSRR*SKEQQD Trigger: ATCCTGCTGTTCTTTTGACAATCTCCTGGAAGTGGG...CGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGACTGACTTTTTGGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CCA 90 bp | TTCACCCACATGGCAGAGCAGTCAAAGTTCACCAAAAGCCACTTGTaGGGATTAAAGTTAAAGGAATCTGCAAACTCCACACCATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FTHMAEQSKFTKSHL*GLKLKESANSTPFR Trigger: TCTGAATGGTGTGGAGTTTGCAGATTCCTTTAACTTTAATCCCCACAAGTGGCTTTTGGTGAACTTTGACTGCTCTGCCATGTGGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGATCTTCTCGATGTCTTaGATTATGTCCTCGTATGTT | + |
|
Preference number: 5 (lower is better) Translates to: QKLEPLTIAFHTENTFPWIFSMS*IMSSYV Trigger: AACATACGAGGACATAATCAAAGACATCGAGAAGAT...CCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CAA 90 bp | AAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGGACATTCACCAAAAGCCACTaGTGGGGATTAAAGTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLEPLTIAFHTENTFPWTFTKSH*WGLKLK Trigger: CTTTAACTTTAATCCCCACAAGTGGCTTTTGGTGAA...TGTCCAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CAA 90 bp | ACAGAAGCTAGAGCCACTGACAATAGCTTTCCACACAGAAAATACTTTTCCCTGTTCACCAAAAGCCACTaGTGGGGATTAAAGTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TEARATDNSFPHRKYFSLFTKSH*WGLKLK Trigger: CTTTAACTTTAATCCCCACAAGTGGCTTTTGGTGAA...CAGGGAAAAGTATTTTCTGTGTGGAAAGCTATTGTCAGTGGCTCTAGCTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS-3UTR CAA 90 bp | CCTGCCACCAATGACCTTATGAGCACAAAGACATCTTATTATCAACAGAAGTCAATCTTCTCGATGTCTTaGATTATGTCCTCGTATGTT | + |
|
Preference number: 5 (lower is better) Translates to: PATNDLMSTKTSYYQQKSIFSMS*IMSSYV Trigger: AACATACGAGGACATAATCAAAGACATCGAGAAGAT...TGACTTCTGTTGATAATAAGATGTCTTTGTGCTCATAAGGTCATTGGTGGCAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CCA 72 bp | GCAGCTTGTGTGAACTCTGGGGAGGCTGCCTGCAGCTaGCGGATAACTTTAGTCCGAGCAGCCAGTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AACVNSGEAACS*RITLVRAASRA Trigger: GGCCCTACTGGCTGCTCGGACTAAAGTTATCCGCCAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS CCA 72 bp | GCAGGATGTGGTCCCCAGTGTAGCGACCACAAAGAATaGAATCAGGCCAGCTGCCTTGTCCCGCTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGCGPQCSDHKE*NQASCLVPLQG Trigger: GCCCTGGAGCGGGACAAGGCAGCTGGCCTGATTCCATTCTTTGTGGTCGCTACACTGGGGACCACATCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS GCA 72 bp | CAGTGTAGCGACCACAAAGAATGGAATCAGGCCAGCTaGCTTGTCCCGCTCCAGGGCTTCCCGAAGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QCSDHKEWNQAS*LVPLQGFPKGR Trigger: TCTGCCCTTCGGGAAGCCCTGGAGCGGGACAAGGCAGCTGGCCTGATTCCATTCTTTGTGGTCGCTACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS GCA 72 bp | CTGCTTGCTAGATCACTGATGTGTTCCCAGGCCAGCTaGACGTGGGCAGACTCCACAGTGCGAGCGCACACA | + |
|
Preference number: 6 (lower is better) Translates to: LLARSLMCSQAS*TWADSTVRAHT Trigger: TGTGTGCGCTCGCACTGTGGAGTCTGCCCACGTGCAGCTGGCCTGGGAACACATCAGTGATCTAGCAAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CCA 72 bp | GCTAGATCACTGATGTGTTCCCAGGCCAGCTGCACGTaGGCAGACTCCACAGTGCGAGCGCACACAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ARSLMCSQASCT*ADSTVRAHTAK Trigger: CTTTGCTGTGTGCGCTCGCACTGTGGAGTCTGCCCACGTGCAGCTGGCCTGGGAACACATCAGTGATCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CAA 90 bp | GTCCCCAGTGTAGCGACCACAAAGAATGGAATCAGGCCAGCTGCCTaGTCCCGCTCCAGGGCTTCCCGAAGGGCAGAAGCTCTCATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPSVATTKNGIRPAA*SRSRASRRAEALME Trigger: TTCCATGAGAGCTTCTGCCCTTCGGGAAGCCCTGGAGCGGGACAAGGCAGCTGGCCTGATTCCATTCTTTGTGGTCGCTACACTGGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS CCA 72 bp | CCAGTCCATCATCACGGTCTCCAGCTCTGTGCACGCTaGGCTTGCAGCCCAGGAGAAACCAATGCAGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PVHHHGLQLCAR*ACSPGETNAAN Trigger: ATTGGCTGCATTGGTTTCTCCTGGGCTGCAAGCCCAGCGTGCACAGAGCTGGAGACCGTGATGATGGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS TCA 72 bp | CTTTCTCTGCCCTCAGCACACTGCTTGCTAGATCACTaGTGTGTTCCCAGGCCAGCTGCACGTGGGCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LSLPSAHCLLDH*CVPRPAARGQT Trigger: AGTCTGCCCACGTGCAGCTGGCCTGGGAACACATCAGTGATCTAGCAAGCAGTGTGCTGAGGGCAGAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CAA 90 bp | AGCCACACACCCTCCTGGTTGCAGATGGGACCCACTTCCAGGAGATaGTCAAAAGAACAGCAGGATGTGGTCCCCAGTGTAGCGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: SHTPSWLQMGPTSRR*SKEQQDVVPSVATT Trigger: TGTGGTCGCTACACTGGGGACCACATCCTGCTGTTCTTTTGACAATCTCCTGGAAGTGGGTCCCATCTGCAACCAGGAGGGTGTGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS GCA 72 bp | ATGATAGCAGCTTGTGTGAACTCTGGGGAGGCTGCCTaGAGCTGGCGGATAACTTTAGTCCGAGCAGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MIAACVNSGEAA*SWRITLVRAAS Trigger: ACTGGCTGCTCGGACTAAAGTTATCCGCCAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCTGCTATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS CCA 72 bp | GGGCCGAAGATAGCCAGGCTCCACATCAGGGTACACTaGACGACCCTCAATGCCATCCAGATAGTCAGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: GPKIARLHIRVH*TTLNAIQIVSY Trigger: ATAGCTGACTATCTGGATGGCATTGAGGGTCGTCCAGTGTACCCTGATGTGGAGCCTGGCTATCTTCGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS CCA 72 bp | CGTCAATGTGCAGCCACACACCCTCCTGGTTGCAGATaGGACCCACTTCCAGGAGATTGTCAAAAGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RQCAATHPPGCR*DPLPGDCQKNS Trigger: GCTGTTCTTTTGACAATCTCCTGGAAGTGGGTCCCATCTGCAACCAGGAGGGTGTGTGGCTGCACATTGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CAA 72 bp | AGATGTGTAAGCAACCAGCTTTTCCATGATAGCAGCTaGTGTGAACTCTGGGGAGGCTGCCTGCAGCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RCVSNQLFHDSS*CELWGGCLQLA Trigger: CGCCAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCTGCTATCATGGAAAAGCTGGTTGCTTACACATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS CAA 72 bp | CCCTCCTGGTTGCAGATGGGACCCACTTCCAGGAGATaGTCAAAAGAACAGCAGGATGTGGTCCCCAGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PSWLQMGPTSRR*SKEQQDVVPSV Trigger: TACACTGGGGACCACATCCTGCTGTTCTTTTGACAATCTCCTGGAAGTGGGTCCCATCTGCAACCAGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS TCA 72 bp | TGGAGCCCTTTAGCCGGAAGCAGACCAACCCAAGAATaGCTTCTGTGCAAATTTCAAAGCGAGGGTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WSPLAGSRPTQE*LLCKFQSEGPG Trigger: GCCAGGACCCTCGCTTTGAAATTTGCACAGAAGTCATTCTTGGGTTGGTCTGCTTCCGGCTAAAGGGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CAA 90 bp | CGCCTGATCAGATGTGTAAGCAACCAGCTTTTCCATGATAGCAGCTaGTGTGAACTCTGGGGAGGCTGCCTGCAGCTGGCGGATAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLIRCVSNQLFHDSS*CELWGGCLQLADNF Trigger: AAAGTTATCCGCCAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCTGCTATCATGGAAAAGCTGGTTGCTTACACATCTGATCAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS CAA 90 bp | TCCCGCTCCAGGGCTTCCCGAAGGGCAGAAGCTCTCATGGAAAAGTaGCCATCCGAAGGGACTGCTTTTAGCTTTATTCCACCAATTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRSRASRRAEALMEK*PSEGTAFSFIPPIN Trigger: GTTAATTGGTGGAATAAAGCTAAAAGCAGTCCCTTCGGATGGCAACTTTTCCATGAGAGCTTCTGCCCTTCGGGAAGCCCTGGAGCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS TCA 72 bp | TGTGCAAATTTCAAAGCGAGGGTCCTGGCGTACCAGTaGCTCAAACTCATGAGACAGCTCCACGTGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: CANFKARVLAYQ*LKLMRQLHVLS Trigger: CGAAAGCACGTGGAGCTGTCTCATGAGTTTGAGTCACTGGTACGCCAGGACCCTCGCTTTGAAATTTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS GCA 72 bp | GGGCTTCCCGAAGGGCAGAAGCTCTCATGGAAAAGTTaGCATCCGAAGGGACTGCTTTTAGCTTTATTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLPEGQKLSWKS*HPKGLLLALFH Trigger: GTGGAATAAAGCTAAAAGCAGTCCCTTCGGATGGCAACTTTTCCATGAGAGCTTCTGCCCTTCGGGAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS CCA 72 bp | AACCAGCTTTTCCATGATAGCAGCTTGTGTGAACTCTaGGGAGGCTGCCTGCAGCTGGCGGATAACTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: NQLFHDSSLCEL*GGCLQLADNFS Trigger: ACTAAAGTTATCCGCCAGCTGCAGGCAGCCTCCCCAGAGTTCACACAAGCTGCTATCATGGAAAAGCTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS GCA 72 bp | CAGGCTCCACATCAGGGTACACTGGACGACCCTCAATaGCATCCAGATAGTCAGCTATATAATCCACCATCT | + |
|
Preference number: 6 (lower is better) Translates to: QAPHQGTLDDPQ*HPDSQLYNPPS Trigger: AGATGGTGGATTATATAGCTGACTATCTGGATGGCATTGAGGGTCGTCCAGTGTACCCTGATGTGGAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS CAA 72 bp | AGGGCTTCCCGAAGGGCAGAAGCTCTCATGGAAAAGTaGCCATCCGAAGGGACTGCTTTTAGCTTTATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RASRRAEALMEK*PSEGTAFSFIP Trigger: TGGAATAAAGCTAAAAGCAGTCCCTTCGGATGGCAACTTTTCCATGAGAGCTTCTGCCCTTCGGGAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000155690.2 ENSMUST00000178704.8 |
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| CDS CAA 72 bp | ACAGTGCGAGCGCACACAGCAAAGCGTAGCACAAACTaGTCTCGGAGACGACATGGAACCAAGTGGATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TVRAHTAKRSTN*SRRRHGTKWIF Trigger: AAAAATCCACTTGGTTCCATGTCGTCTCCGAGACAAGTTTGTGCTACGCTTTGCTGTGTGCGCTCGCACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CAA 90 bp | CTCTTCACCCACATGGCAGAGCAGTCAAAGTTCACCAAAAGCCACTaGTGGGGATTAAAGTTAAAGGAATCTGCAAACTCCACACCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LFTHMAEQSKFTKSH*WGLKLKESANSTPF Trigger: GAATGGTGTGGAGTTTGCAGATTCCTTTAACTTTAATCCCCACAAGTGGCTTTTGGTGAACTTTGACTGCTCTGCCATGTGGGTGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CAA 72 bp | CACATGGCAGAGCAGTCAAAGTTCACCAAAAGCCACTaGTGGGGATTAAAGTTAAAGGAATCTGCAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: HMAEQSKFTKSH*WGLKLKESANS Trigger: GGAGTTTGCAGATTCCTTTAACTTTAATCCCCACAAGTGGCTTTTGGTGAACTTTGACTGCTCTGCCATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CAA 72 bp | CTGTTTATTCTTTGTAAGAGAGTTTCGTTCAACTCATaGGAGCCCTTTAGCCGGAAGCAGACCAACCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LFILCKRVSFNS*EPFSRKQTNPR Trigger: TCTTGGGTTGGTCTGCTTCCGGCTAAAGGGCTCCAATGAGTTGAACGAAACTCTCTTACAAAGAATAAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CCA 72 bp | ATGGCAGAGCAGTCAAAGTTCACCAAAAGCCACTTGTaGGGATTAAAGTTAAAGGAATCTGCAAACTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: MAEQSKFTKSHL*GLKLKESANST Trigger: TGTGGAGTTTGCAGATTCCTTTAACTTTAATCCCCACAAGTGGCTTTTGGTGAACTTTGACTGCTCTGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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| CDS CCA 72 bp | TGTTTATTCTTTGTAAGAGAGTTTCGTTCAACTCATTaGAGCCCTTTAGCCGGAAGCAGACCAACCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CLFFVREFRSTH*SPLAGSRPTQE Trigger: TTCTTGGGTTGGTCTGCTTCCGGCTAAAGGGCTCCAATGAGTTGAACGAAACTCTCTTACAAAGAATAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066237.10 ENSMUST00000109659.9 ENSMUST00000178704.8 |
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