RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024740

Ensembl transcript IDs: ENSMUST00000025649.10, ENSMUST00000236280.2, ENSMUST00000236328.2, ENSMUST00000237337.2

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCACGAGTGTGAGGTATCACACACAGGTGCACAGAGCTGCTTCTTaGCTGAAGAGTGACAAAAGTCCTCCCCAGGAGGAGCCAACTGGC +
Preference number: 1 (lower is better)
Translates to: STSVRYHTQVHRAAS*LKSDKSPPQEEPTG
Trigger: GCCAGTTGGCTCCTCCTGGGGAGGACTTTTGTCACTCTTCAGCCAAGAAGCAGCTCTGTGCACCTGTGTGTGATACCTCACACTCGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR TCA 90 bp GAGGTATCACACACAGGTGCACAGAGCTGCTTCTTGGCTGAAGAGTaGCAAAAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCA +
Preference number: 1 (lower is better)
Translates to: EVSHTGAQSCFLAEE*QKSSPGGANWQHHS
Trigger: TGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTTTTGTCACTCTTCAGCCAAGAAGCAGCTCTGTGCACCTGTGTGTGATACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR TCA 90 bp GGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCAAGGTaGTGGCTGGTAAAAATCCAGGGAGAAAATATTTCACTTTCAGCC +
Preference number: 1 (lower is better)
Translates to: GGANWQHHSRLGGPR*WLVKIQGENISLSA
Trigger: GGCTGAAAGTGAAATATTTTCTCCCTGGATTTTTACCAGCCATCACCTTGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR-3UTR CCA 90 bp TCCCAGGTTTCCACTCAGGCAGCCCGTAGCCTGACAGGCCTCCAGGCTGATGTTCCAAGAAAACAAGGGTaGGCAAGGGAGGGGAGGATA +
Preference number: 2 (lower is better)
Translates to: SQVSTQAARSLTGLQADVPRKQG*AREGRI
Trigger: TATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGG...AACATCAGCCTGGAGGCCTGTCAGGCTACGGGCTGCCTGAGTGGAAACCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR-3UTR CCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCCCAAGAAAACAAGGGTaGGCAAGGGAGGGGAGGATA +
Preference number: 2 (lower is better)
Translates to: STQVSCGSRGRWLREKPPPRKQG*AREGRI
Trigger: TATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGG...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
3UTR-3UTR GCA 90 bp AAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCAGGGAAAAGCCTCCCATaGCAAGAAAACAAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: KSSPGGANWQHHSRLGGPGKSLP*QENKGG
Trigger: CCCACCCTTGTTTTCTTGGCATGGGAGGCTTTTCCC...TGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR-3UTR CCA 90 bp CTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCACAACACCATTCAAGGCTTaGTGGTCCAAGGTGATGGCT +
Preference number: 2 (lower is better)
Translates to: LKTVEPSRPSSLYLNLPTTPFKA*WSKVMA
Trigger: AGCCATCACCTTGGACCACCAAGCCTTGAATGGTGT...TGTGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR-3UTR GCA 90 bp AGTTCCCCGAGACAAAAGGGCTGTGGCTTGGGAATTCTCCACCATCCCAGGTTTGGTATCACACACAGGTaGACAGAGCTGCTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: SSPRQKGCGLGILHHPRFGITHR*TELLLG
Trigger: GCCAAGAAGCAGCTCTGTGCACCTGTGTGTGATACC...AAACCTGGGATGGTGGAGAATTCCCAAGCCACAGCCCTTTTGTCTCGGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR-3UTR CCA 90 bp CTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCACACAGAGCTGCTTCTTaGCTGAAGAGTGACAAAAGT +
Preference number: 2 (lower is better)
Translates to: LSRQWNPLDPLPSTSTSPHRAAS*LKSDKS
Trigger: ACTTTTGTCACTCTTCAGCCAAGAAGCAGCTCTGTG...TGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR TCA 72 bp CACACAGGTGCACAGAGCTGCTTCTTGGCTGAAGAGTaGCAAAAGTCCTCCCCAGGAGGAGCCAACTGGCAA +
Preference number: 3 (lower is better)
Translates to: HTGAQSCFLAEE*QKSSPGGANWQ
Trigger: TTGCCAGTTGGCTCCTCCTGGGGAGGACTTTTGTCACTCTTCAGCCAAGAAGCAGCTCTGTGCACCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR CCA 72 bp CCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTaGTGGTCCAAGGTGATGGCTGGTAAAAATCCAGGG +
Preference number: 3 (lower is better)
Translates to: PRRSQLATPFKA*WSKVMAGKNPG
Trigger: CCCTGGATTTTTACCAGCCATCACCTTGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR-3UTR CAA 90 bp AACCAATTCACAGCCCCCACCTCCTTCTCTGTGAAGAAGGGAGTTCCCCGAGACAACACCATTCAAGGCTaGGTGGTCCAAGGTGATGGC +
Preference number: 3 (lower is better)
Translates to: NQFTAPTSFSVKKGVPRDNTIQG*VVQGDG
Trigger: GCCATCACCTTGGACCACCAAGCCTTGAATGGTGTT...GTCTCGGGGAACTCCCTTCTTCACAGAGAAGGAGGTGGGGGCTGTGAATTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR TCA 72 bp GGTATCACACACAGGTGCACAGAGCTGCTTCTTGGCTaGAGAGTGACAAAAGTCCTCCCCAGGAGGAGCCAA +
Preference number: 3 (lower is better)
Translates to: GITHRCTELLLG*RVTKVLPRRSQ
Trigger: TTGGCTCCTCCTGGGGAGGACTTTTGTCACTCTTCAGCCAAGAAGCAGCTCTGTGCACCTGTGTGTGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR CCA 72 bp GTGAGGTATCACACACAGGTGCACAGAGCTGCTTCTTaGCTGAAGAGTGACAAAAGTCCTCCCCAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: VRYHTQVHRAAS*LKSDKSPPQEE
Trigger: CTCCTCCTGGGGAGGACTTTTGTCACTCTTCAGCCAAGAAGCAGCTCTGTGCACCTGTGTGTGATACCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
3UTR CCA 72 bp CCTCAACCTCCCCACACCCACAACCTACATAGACAGTaGAGGACAAAGCACGAGTGTGAGGTATCACACACA +
Preference number: 3 (lower is better)
Translates to: PQPPHTHNLHRQ*RTKHECEVSHT
Trigger: TGTGTGTGATACCTCACACTCGTGCTTTGTCCTCCACTGTCTATGTAGGTTGTGGGTGTGGGGAGGTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTCTGCTGGACAGGGCCTaGGTGCTGGCACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPLLDRA*VLALGL
Trigger: GAGGCCCAGTGCCAGCACCCAGGCCCTGTCCAGCAG...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp GTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCAAGGAGCAAGTGACCAGCTaGCCCTGTCCCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLPRRSQLATPFKAWWSKEQVTS*PCPCLS
Trigger: GGAGAGGCAGGGACAGGGTCAGCTGGTCACTTGCTC...CTTGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCCCAAAGGAGGTCTCGTaGGGAGCCGTACTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPPKEVS*GAVLLE
Trigger: CTCCAGCAGTACGGCTCCTCACGAGACCTCCTTTGG...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCGCCGCACCGTGCTATTaGTGCTGGCAAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPAAPCY*CWQAAS
Trigger: GGAAGCTGCTTGCCAGCATCAATAGCACGGTGCGGC...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCGGTCGCCCACCAGGATaGAGTCGCCCTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPGRPPG*SRPWSS
Trigger: TGAAGACCAAGGGCGACTTCATCCTGGTGGGCGACC...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp GTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTGGCAAGCAGCAGCACTaGGCGCATGAGGTCGCCCAC +
Preference number: 4 (lower is better)
Translates to: VSTQVSCGSRGRWLREKPGKQQH*AHEVAH
Trigger: GTGGGCGACCTCATGCGCTCAGTGCTGCTGCTTGCC...AGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTGGCAAGCAGCAGCACTaGGCGCATGAGGTCGCCCAC +
Preference number: 4 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPGKQQH*AHEVAH
Trigger: GTGGGCGACCTCATGCGCTCAGTGCTGCTGCTTGCC...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp AAAGCCCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGTGGACAGGGCCTGGGTaGTGGCACTGGGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KALFPHRSAVALGAGGLGWTGPG*WHWASK
Trigger: CTTTGAGGCCCAGTGCCAGCACCCAGGCCCTGTCCA...CCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAAAGTTTGCTGGAGCTaGCGCTGCTGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPKVCWS*RCWTGP
Trigger: AGGCCCTGTCCAGCAGCGTCAGCTCCAGCAAACTTT...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGTTATACCAGCTCTCTaGCAGCGAGGTCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPVIPAL*QRGHQP
Trigger: GGGCTGGTGACCTCGCTGTCAGAGAGCTGGTATAAC...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCACCAACCTCCTGTAGGTaGTGCCGCTCCTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPPTSCR*CRSSSV
Trigger: CACTGATGAGGAGCGGCAGCACCTACAGGAGGTTGG...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGACAGGGCCTGGGTGCTaGCACTGGGCCTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKTGPGC*HWASKQ
Trigger: CTGCTTTGAGGCCCAGTGCCAGCACCCAGGCCCTGT...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp GTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCAAAGGAGGTCTCGTaGGGAGCCGTACTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSTQVSCGSRGRWLREKPPKEVS*GAVLLE
Trigger: CTCCAGCAGTACGGCTCCTCACGAGACCTCCTTTGG...AGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGGCCGCACCGTGCTATTaGTGCTGGCAAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKAAPCY*CWQAAS
Trigger: GGAAGCTGCTTGCCAGCATCAATAGCACGGTGCGGC...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp AGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCATGCCAACCAACCTCCTGTAGGTaGTGCCGCTCCTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: RSAVALGAGGLGKSLPCQPTSCR*CRSSSV
Trigger: CACTGATGAGGAGCGGCAGCACCTACAGGAGGTTGG...TTGGCATGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCGCTCCTCATCAGTGGTaGCAGCACTGTCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPAPHQW*QHCPSD
Trigger: GTCAGAAGGACAGTGCTGCCACCACTGATGAGGAGC...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGCTCCTCATCAGTGGTaGCAGCACTGTCCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPAPHQW*QHCPSD
Trigger: GTCAGAAGGACAGTGCTGCCACCACTGATGAGGAGC...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp CTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCACAACATTCCCACCTCTTTaGCTGGCCGAAGACCCTCCG +
Preference number: 4 (lower is better)
Translates to: LKTVEPSRPSSLYLNLPTTFPPL*LAEDPP
Trigger: CGGAGGGTCTTCGGCCAGTCAAAGAGGTGGGAATGT...TGTGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGACATTCCCACCTCTTTaGCTGGCCGAAGACCCTCCG +
Preference number: 4 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKTFPPL*LAEDPP
Trigger: CGGAGGGTCTTCGGCCAGTCAAAGAGGTGGGAATGT...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGGCCCTATCATGCCGTTaGCTGTGCCAAAGAGCACCG +
Preference number: 4 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKALSCR*LCQRAP
Trigger: CGGTGCTCTTTGGCACAGTCAACGGCATGATAGGGC...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTTCCCACCTCTTTGACTaGCCGAAGACCCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPSHLFD*PKTLRS
Trigger: ACTGCGGAGGGTCTTCGGCCAGTCAAAGAGGTGGGA...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCACAATACGACCCTGCTTaGGCTCTGCCTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPQYDPA*ALPLQD
Trigger: ATCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTG...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGGCCGCTCCTCATCAGTaGTGGCAGCACTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRAAPHQ*WQHCPS
Trigger: AGAAGGACAGTGCTGCCACCACTGATGAGGAGCGGC...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGAAGACCCTCCGCAGTaGCCACATAGATCTCTAATC +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPEDPPQ*PHRSLI
Trigger: GATTAGAGATCTATGTGGTCACTGCGGAGGGTCTTC...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp AACCAATTCACAGCCCCCACCTCCTTCTCTGTGAAGAAGGGAGTTCCCCGAGACGCCCTATCATGCCGTTaGCTGTGCCAAAGAGCACCG +
Preference number: 4 (lower is better)
Translates to: NQFTAPTSFSVKKGVPRDALSCR*LCQRAP
Trigger: CGGTGCTCTTTGGCACAGTCAACGGCATGATAGGGC...GTCTCGGGGAACTCCCTTCTTCACAGAGAAGGAGGTGGGGGCTGTGAATTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp CTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCACAACAACCACCTGGCTaGTGTTACAGGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LSRQWNPLDPLPSTSTSPQQPPG*CYRRPH
Trigger: GTGTGGCCTCCTGTAACAGCAGCCAGGTGGTTGTTG...TGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCACCCTGCTTGGGCTCTaGCTCTTCAGGATATACCAT +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPTLLGL*LFRIYH
Trigger: ATGGTATATCCTGAAGAGGCAGAGCCCAAGCAGGGT...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCGATCTCCAGAAGGAGTaGTCAATCTTGCCCACGCTT +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPDLQKE*SILPTL
Trigger: AAGCGTGGGCAAGATTGAGCACTCCTTCTGGAGATC...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp AAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCAATGTCCTCAACACCGTaGGCTGGGTGCCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: KSSPGGANWQHHSRLGGPMSSTP*AGCPKS
Trigger: TGACTTTGGGCACCCAGCCCACGGTGTTGAGGACAT...TGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp GTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCAAGCAATACGACCCTGCTTaGGCTCTGCCTCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VLPRRSQLATPFKAWWSKQYDPA*ALPLQD
Trigger: ATCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTG...CTTGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGAAGCTCCTTTTCTGTaGTCCACTCATAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPEAPFL*STHRAA
Trigger: TGCGGCTCTATGAGTGGACCACAGAAAAGGAGCTTC...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp AGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCATGCCAATGTCCCCTAATGGGGTaGTATCCAAGCATGCCACTT +
Preference number: 4 (lower is better)
Translates to: RSAVALGAGGLGKSLPCQCPLMG*YPSMPL
Trigger: AAGTGGCATGCTTGGATATCACCCCATTAGGGGACA...TTGGCATGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp AGTGACAAAAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGAAAGTTTGCTGGAGCTaGCGCTGCTGGACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SDKSPPQEEPTGNTIQGLKVCWS*RCWTGP
Trigger: AGGCCCTGTCCAGCAGCGTCAGCTCCAGCAAACTTT...CAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTTTTGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCATGGCAGAACACATTaGCAAACTCGCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKHGRTH*QTRPGG
Trigger: TCCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATG...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGTCAGATCACCATCGATaGAGCCTGTGGCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKSDHHR*SLWLVL
Trigger: CAGAACCAGCCACAGGCTTCATCGATGGTGATCTGA...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGTCAGATCACCATCGATaGAGCCTGTGGCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRSDHHR*SLWLVL
Trigger: CAGAACCAGCCACAGGCTTCATCGATGGTGATCTGA...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp TCCCAGGTTTCCACTCAGGCAGCCCGTAGCCTGACAGGCCTCCAGGCTGATGTTCATAGAGGGGAACTGTaGGAATATGGAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SQVSTQAARSLTGLQADVHRGEL*EYGASG
Trigger: TCCAGAAGCTCCATATTCGCACAGTTCCCCTCTATG...AACATCAGCCTGGAGGCCTGTCAGGCTACGGGCTGCCTGAGTGGAAACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCAGAGGTCATCTGCAGTTaGCTCCCGCTTCATACCACT +
Preference number: 4 (lower is better)
Translates to: KSSPGGANWQHHSRLGGPEVICS*LPLHTT
Trigger: AGTGGTATGAAGCGGGAGGCAACTGCAGATGACCTC...TGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGGAGGTCATCTGCAGTTaGCTCCCGCTTCATACCACT +
Preference number: 4 (lower is better)
Translates to: KASHAKKTRVGKGGEDRREVICS*LPLHTT
Trigger: AGTGGTATGAAGCGGGAGGCAACTGCAGATGACCTC...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAATGAGAACTCTTGTCTaGCCCACAAAAGAGAGCACC +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPMRTLV*PTKEST
Trigger: GGTGCTCTCTTTTGTGGGCCAGACAAGAGTTCTCAT...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGGCTACTCTCAAAAGTaGTCATCAGGATGGATCGAG +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPGYSQK*SSGWIE
Trigger: CTCGATCCATCCTGATGACCACTTTTGAGAGTAGCC...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGATAGCAGATCTTCCTaGGAGACTCATAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPDSRSS*ETHRGE
Trigger: TTCCCCTCTATGAGTCTCCCAGGAAGATCTGCTATC...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp GTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTGAGGAGCCGTACTGCTaGAGAAAAGTTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VSTQVSCGSRGRWLREKPEEPYC*RKVCWS
Trigger: GCTCCAGCAAACTTTTCTCCAGCAGTACGGCTCCTC...AGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp GTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTACAAACTCGCCCAGGTaGAAGAGACCAACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VSTQVSCGSRGRWLREKPTNSPR*KRPTSC
Trigger: ACAGGAGGTTGGTCTCTTCCACCTGGGCGAGTTTGT...AGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp CAAAGCACGAGTGTGAGGTATCACACACAGGTGCACAGAGCTGCTTCTTGGCTGTACAGGAGGCCACACTaGTGTTCTTGCCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QSTSVRYHTQVHRAASWLYRRPH*CSCPEA
Trigger: AGCCTCAGGGCAAGAACATCAGTGTGGCCTCCTGTA...CAGCCAAGAAGCAGCTCTGTGCACCTGTGTGTGATACCTCACACTCGTGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp GTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTTGGCTGTGCCCACAATaGAGTAAGTGTTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VSTQVSCGSRGRWLREKPWLCPQ*SKCWGL
Trigger: AAGACCCCAACACTTACTTCATTGTGGGCACAGCCA...AGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCTCAGGTACAGGGCCATaGTGTTGTTGTAGTGATTAC +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPSGTGP*CCCSDY
Trigger: GTAATCACTACAACAACATCATGGCCCTGTACCTGA...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGCAGCACTGTCCTTCTaGCACACAAACAAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPAALSF*HTNKLK
Trigger: CTTTAACTTGTTTGTGTGTCAGAAGGACAGTGCTGC...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGGTCTTTCGCTCAGTGTaGAAGGATCTCCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRVFRSV*KDLQKE
Trigger: CTCCTTCTGGAGATCCTTTCACACTGAGCGAAAGAC...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp CTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCACAGCTGTTATTGGCCAATaGCAGACTGTCAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: LKTVEPSRPSSLYLNLPTAVIGQ*QTVRIA
Trigger: GGCTATCCTGACAGTCTGGCATTGGCCAATAACAGC...TGTGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCAACCCTGCTTGGGCTCTaGCTCTTCAGGATATACCAT +
Preference number: 4 (lower is better)
Translates to: KSSPGGANWQHHSRLGGPTLLGL*LFRIYH
Trigger: ATGGTATATCCTGAAGAGGCAGAGCCCAAGCAGGGT...TGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp TCCCAGGTTTCCACTCAGGCAGCCCGTAGCCTGACAGGCCTCCAGGCTGATGTTATCCAAGATCTCCACTaGACTCATCCAGTTGGGATT +
Preference number: 4 (lower is better)
Translates to: SQVSTQAARSLTGLQADVIQDLH*THPVGI
Trigger: AATCCCAACTGGATGAGTGCAGTGGAGATCTTGGAT...AACATCAGCCTGGAGGCCTGTCAGGCTACGGGCTGCCTGAGTGGAAACCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCATGCCAATTTGATGAGGTCATCTaGAGTTGCCTCCCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RSAVALGAGGLGKSLPCQFDEVI*SCLPLH
Trigger: ATGAAGCGGGAGGCAACTGCAGATGACCTCATCAAA...TTGGCATGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp CTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCATTAGGCACTCAGCAATaGAGGTCTCTCCGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LSRQWNPLDPLPSTSTSPLGTQQ*RSLRGV
Trigger: AACTCCTCGGAGAGACCTCCATTGCTGAGTGCCTAA...TGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCCTGGTAAGTCAATGCTaGCATGCTCATGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPLVSQC*HAHGFQ
Trigger: TTGGAATCCATGAGCATGCCAGCATTGACTTACCAG...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AACCAATTCACAGCCCCCACCTCCTTCTCTGTGAAGAAGGGAGTTCCCCGAGACTCCAATGGCACAAAGTaGGGAGAGGCCATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: NQFTAPTSFSVKKGVPRDSNGTK*GEAIAV
Trigger: GACAGCAATGGCCTCTCCCCACTTTGTGCCATTGGA...GTCTCGGGGAACTCCCTTCTTCACAGAGAAGGAGGTGGGGGCTGTGAATTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp TCCCAGGTTTCCACTCAGGCAGCCCGTAGCCTGACAGGCCTCCAGGCTGATGTTACTTCAAAGGTGTGCTaGTCAATGATGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SQVSTQAARSLTGLQADVTSKVC*SMMRRL
Trigger: CAACCTCCTCATCATTGACCAGCACACCTTTGAAGT...AACATCAGCCTGGAGGCCTGTCAGGCTACGGGCTGCCTGAGTGGAAACCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAACTTCAAAGGTGTGCTaGTCAATGATGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPTSKVC*SMMRRL
Trigger: CAACCTCCTCATCATTGACCAGCACACCTTTGAAGT...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCAAAAGAAAGTCTGCTaGTCGTCCACAAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKQKKVC*SSTKPI
Trigger: GATGGGCTTTGTGGACGATCAGCAGACTTTCTTTTG...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp GTTATAAAAAGCCCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGGCTCTTTCCACTCGCTaGCCAAAGCTTTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VIKSPVSTQVSCGSRGRWALSTR*PKLWAL
Trigger: AAGAGCCCAAAGCTTTGGTCAGCGAGTGGAAAGAGC...CCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGGGCTTTTTATAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp AGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCATGCCAAGTCAGGATAGCCATCTaGGTTGAGAGGACACATATA +
Preference number: 4 (lower is better)
Translates to: RSAVALGAGGLGKSLPCQVRIAI*VERTHI
Trigger: TATATGTGTCCTCTCAACTCAGATGGCTATCCTGAC...TTGGCATGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp AAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTGGTCGCCCACCAGGATaGAGTCGCCCTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KRRKQKEALKTVEPSRPSGRPPG*SRPWSS
Trigger: TGAAGACCAAGGGCGACTTCATCCTGGTGGGCGACC...AGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp CAAAGCACGAGTGTGAGGTATCACACACAGGTGCACAGAGCTGCTTCTTGGCTGCATGGCAGAACACATTaGCAAACTCGCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QSTSVRYHTQVHRAASWLHGRTH*QTRPGG
Trigger: TCCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATG...CAGCCAAGAAGCAGCTCTGTGCACCTGTGTGTGATACCTCACACTCGTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTGAAGAGCTCCATGACTaGAATCTTCCCGTACATTCC +
Preference number: 4 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPEELHD*NLPVHS
Trigger: GGAATGTACGGGAAGATTGCAGTCATGGAGCTCTTC...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp CTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCACATTGACATCAATGACGTaGAGTTCCTCTAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: LKTVEPSRPSSLYLNLPTLTSMT*SSSRRM
Trigger: CATCCGCCTAGAGGAACTGCACGTCATTGATGTCAA...TGTGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGATAGGAGGAGCAATTaGCAGGTATTTATCACCGTT +
Preference number: 4 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPDRRSN*QVFITV
Trigger: AACGGTGATAAATACCTGGCAATTGCTCCTCCTATC...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTTATCTTGGACTTCAATaGGGCTGGAAAGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPYLGLQ*GWKGPQ
Trigger: TTGGGGTCCTTTCCAGCCGCATTGAAGTCCAAGATA...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGAGCACTTCAAAGGTGTaGTGGTCAATGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRSTSKV*WSMMRR
Trigger: CCTCCTCATCATTGACCAGCACACCTTTGAAGTGCT...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp GTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTAGCACTTCAAAGGTGTaGTGGTCAATGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VSTQVSCGSRGRWLREKPSTSKV*WSMMRR
Trigger: CCTCCTCATCATTGACCAGCACACCTTTGAAGTGCT...AGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp AGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCATGCCAAAGTGATTACACTCAGTaGGAAGCTCCTTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RSAVALGAGGLGKSLPCQSDYTQ*EAPFLW
Trigger: CCACAGAAAAGGAGCTTCGCACTGAGTGTAATCACT...TTGGCATGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGCTGCCATCATCATACTaGAAGTTTGCCACAACCTCC +
Preference number: 4 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRLPSSY*KFATTS
Trigger: GGAGGTTGTGGCAAACTTGCAGTATGATGATGGCAG...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTCTGCCATCATCATACTaGAAGTTTGCCACAACCTCC +
Preference number: 4 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPLPSSY*KFATTS
Trigger: GGAGGTTGTGGCAAACTTGCAGTATGATGATGGCAG...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCCGCTTCATACCACTaGCATCATCATACTGCAAGT +
Preference number: 4 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKPASYH*HHHTAS
Trigger: ACTTGCAGTATGATGATGGCAGTGGTATGAAGCGGG...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp CAAAGCACGAGTGTGAGGTATCACACACAGGTGCACAGAGCTGCTTCTTGGCTGCTGTCCAAAGTCCAATaGCACAAAGTGGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QSTSVRYHTQVHRAASWLLSKVQ*HKVGRG
Trigger: GCCTCTCCCCACTTTGTGCCATTGGACTTTGGACAG...CAGCCAAGAAGCAGCTCTGTGCACCTGTGTGTGATACCTCACACTCGTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTAACCTGTCTCGATGTTaGGCCCAAAGTAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPNLSRC*AQSRKE
Trigger: CTCTTTTCTACTTTGGGCTCAACATCGAGACAGGTT...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTTCAGGTACAGGGCCATaGTGTTGTTGTAGTGATTAC +
Preference number: 4 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPSGTGP*CCCSDY
Trigger: GTAATCACTACAACAACATCATGGCCCTGTACCTGA...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGGCAGCACTGTCCTTCTaGCACACAAACAAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRAALSF*HTNKLK
Trigger: CTTTAACTTGTTTGTGTGTCAGAAGGACAGTGCTGC...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCCACACAATAGTGCTTTaGTTAATGATAGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: STQVSCGSRGRWLREKPPHTIVL*LMIGGA
Trigger: TGCTCCTCCTATCATTAAGCAAAGCACTATTGTGTG...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGATCCAAGATCTCCACTaGACTCATCCAGTTGGGATT +
Preference number: 4 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRIQDLH*THPVGI
Trigger: AATCCCAACTGGATGAGTGCAGTGGAGATCTTGGAT...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp AGTTCCCCGAGACAAAAGGGCTGTGGCTTGGGAATTCTCCACCATCCCAGGTTTGATCTCCAGAAGGAGTaGTCAATCTTGCCCACGCTT +
Preference number: 4 (lower is better)
Translates to: SSPRQKGCGLGILHHPRFDLQKE*SILPTL
Trigger: AAGCGTGGGCAAGATTGAGCACTCCTTCTGGAGATC...AAACCTGGGATGGTGGAGAATTCCCAAGCCACAGCCCTTTTGTCTCGGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCACCTCTTTGACTaGCCGAAGACCCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: KRRKQKEALKTVEPSRPSSHLFD*PKTLRS
Trigger: ACTGCGGAGGGTCTTCGGCCAGTCAAAGAGGTGGGA...AGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AGTTCCCCGAGACAAAAGGGCTGTGGCTTGGGAATTCTCCACCATCCCAGGTTTGAAGCTCCTTTTCTGTaGTCCACTCATAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SSPRQKGCGLGILHHPRFEAPFL*STHRAA
Trigger: TGCGGCTCTATGAGTGGACCACAGAAAAGGAGCTTC...AAACCTGGGATGGTGGAGAATTCCCAAGCCACAGCCCTTTTGTCTCGGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp AGTTCCCCGAGACAAAAGGGCTGTGGCTTGGGAATTCTCCACCATCCCAGGTTTGAGGCCATAAACCTTTaGTGCCTGGTAAGTCAATGC +
Preference number: 4 (lower is better)
Translates to: SSPRQKGCGLGILHHPRFEAINL*CLVSQC
Trigger: GCATTGACTTACCAGGCATCAAAGGTTTATGGCCTC...AAACCTGGGATGGTGGAGAATTCCCAAGCCACAGCCCTTTTGTCTCGGGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp AAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTGATTGCTGCTATAGATaGCAGTGGGCCGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KRRKQKEALKTVEPSRPSDCCYR*QWAGQS
Trigger: GCTCTGACCGGCCCACTGTCATCTATAGCAGCAATC...AGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp ACACCATTCAAGGCTTGGTGGTCCAAGGTGATGGCTGGTAAAAATCCAGGGAGACGATGGTGCCAATGGTaGGAGTGCTGTTATTGGCCA +
Preference number: 4 (lower is better)
Translates to: TPFKAWWSKVMAGKNPGRRWCQW*ECCYWP
Trigger: TGGCCAATAACAGCACTCTCACCATTGGCACCATCG...TCTCCCTGGATTTTTACCAGCCATCACCTTGGACCACCAAGCCTTGAATGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AGTGACAAAAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGTGCCTGGTAAGTCAATaGTGGCATGCTCATGGATTC +
Preference number: 4 (lower is better)
Translates to: SDKSPPQEEPTGNTIQGLCLVSQ*WHAHGF
Trigger: GAATCCATGAGCATGCCAGCATTGACTTACCAGGCA...CAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTTTTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AGTTCCCCGAGACAAAAGGGCTGTGGCTTGGGAATTCTCCACCATCCCAGGTTTGCTGATGAGCCACGTTaGCACAAAAGAAAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSPRQKGCGLGILHHPRFADEPR*HKRKSA
Trigger: AGCAGACTTTCTTTTGTGGCAACGTGGCTCATCAGC...AAACCTGGGATGGTGGAGAATTCCCAAGCCACAGCCCTTTTGTCTCGGGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCATTATTGAGTCGGTTCTaGATGTCCAACAGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: KSSPGGANWQHHSRLGGPLLSRF*MSNRRL
Trigger: TAACCTCCTGTTGGACATGCAGAACCGACTCAATAA...TGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGTTATTGAGTCGGTTCTaGATGTCCAACAGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKLLSRF*MSNRRL
Trigger: TAACCTCCTGTTGGACATGCAGAACCGACTCAATAA...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR GCA 90 bp CAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCCCCGCTTCATACCACTaGCATCATCATACTGCAAGT +
Preference number: 4 (lower is better)
Translates to: QKEALKTVEPSRPSSLYLPASYH*HHHTAS
Trigger: ACTTGCAGTATGATGATGGCAGTGGTATGAAGCGGG...GAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp GTTATAAAAAGCCCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGTTTGATGAGGTCATCTaGAGTTGCCTCCCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VIKSPVSTQVSCGSRGRWFDEVI*SCLPLH
Trigger: ATGAAGCGGGAGGCAACTGCAGATGACCTCATCAAA...CCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGGGCTTTTTATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp ACACCATTCAAGGCTTGGTGGTCCAAGGTGATGGCTGGTAAAAATCCAGGGAGAATGCTGGCATGCTCATaGATTCCAATGCCGTTCCGG +
Preference number: 4 (lower is better)
Translates to: TPFKAWWSKVMAGKNPGRMLACS*IPMPFR
Trigger: CCGGAACGGCATTGGAATCCATGAGCATGCCAGCAT...TCTCCCTGGATTTTTACCAGCCATCACCTTGGACCACCAAGCCTTGAATGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AACCTACATAGACAGTGGAGGACAAAGCACGAGTGTGAGGTATCACACACAGGTCTCAACACCGTGGGCTaGGTGCCCAAAGTCACCTTT +
Preference number: 4 (lower is better)
Translates to: NLHRQWRTKHECEVSHTGLNTVG*VPKVTF
Trigger: AAAGGTGACTTTGGGCACCCAGCCCACGGTGTTGAG...ACCTGTGTGTGATACCTCACACTCGTGCTTTGTCCTCCACTGTCTATGTAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCATTTCCATCTGAATACTaGAAGACCACAATACGACCC +
Preference number: 4 (lower is better)
Translates to: KSSPGGANWQHHSRLGGPFPSEY*KTTIRP
Trigger: GGGTCGTATTGTGGTCTTCCAGTATTCAGATGGAAA...TGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGTTTCCATCTGAATACTaGAAGACCACAATACGACCC +
Preference number: 4 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRFPSEY*KTTIRP
Trigger: GGGTCGTATTGTGGTCTTCCAGTATTCAGATGGAAA...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CCA 90 bp GTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTATAACTAGGGAGCCATaGCAGAACACATTGACAAAC +
Preference number: 4 (lower is better)
Translates to: VSTQVSCGSRGRWLREKPITREP*QNTLTN
Trigger: GTTTGTCAATGTGTTCTGCCATGGCTCCCTAGTTAT...AGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR TCA 90 bp AGTGAACTGGTTTTAGTTATAAAAAGCCCTGTTTCCACACAGGTCAGCTGTGGCCCATCTCTGTGTGGCTaGTTTGCCGGAGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SELVLVIKSPVSTQVSCGPSLCG*FAGAPE
Trigger: CTCAGGAGCTCCGGCAAATCAGCCACACAGAGATGG...GCCACAGCTGACCTGTGTGGAAACAGGGCTTTTTATAACTAAAACCAGTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp GAGGCAAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACACAGTGCCATCCATCTaGTCCTCCTTCTCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: EAREESKRKLSRQWNPLDTVPSI*SSFSKS
Trigger: GCTCTTAGAGAAGGAGGAGCAGATGGATGGCACTGT...GTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp CAAAGCACGAGTGTGAGGTATCACACACAGGTGCACAGAGCTGCTTCTTGGCTGGGTGATATCCAAGCATaGCACTTCATGTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: QSTSVRYHTQVHRAASWLGDIQA*HFMFHL
Trigger: GAGATGGAACATGAAGTGGCATGCTTGGATATCACC...CAGCCAAGAAGCAGCTCTGTGCACCTGTGTGTGATACCTCACACTCGTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AACCTACATAGACAGTGGAGGACAAAGCACGAGTGTGAGGTATCACACACAGGTACACCGTGGGCTGGGTaGCCAAAGTCACCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: NLHRQWRTKHECEVSHTGTPWAG*PKSPFY
Trigger: GTAAAAAGGTGACTTTGGGCACCCAGCCCACGGTGT...ACCTGTGTGTGATACCTCACACTCGTGCTTTGTCCTCCACTGTCTATGTAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp AGTTCCCCGAGACAAAAGGGCTGTGGCTTGGGAATTCTCCACCATCCCAGGTTTAGTGATTACACTCAGTaGGAAGCTCCTTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSPRQKGCGLGILHHPRFSDYTQ*EAPFLW
Trigger: CCACAGAAAAGGAGCTTCGCACTGAGTGTAATCACT...AAACCTGGGATGGTGGAGAATTCCCAAGCCACAGCCCTTTTGTCTCGGGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AACCTACATAGACAGTGGAGGACAAAGCACGAGTGTGAGGTATCACACACAGGTGAGGAGCCGTACTGCTaGAGAAAAGTTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: NLHRQWRTKHECEVSHTGEEPYC*RKVCWS
Trigger: GCTCCAGCAAACTTTTCTCCAGCAGTACGGCTCCTC...ACCTGTGTGTGATACCTCACACTCGTGCTTTGTCCTCCACTGTCTATGTAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AGTGAACTGGTTTTAGTTATAAAAAGCCCTGTTTCCACACAGGTCAGCTGTGGCGCCGCTCCTCATCAGTaGTGGCAGCACTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SELVLVIKSPVSTQVSCGAAPHQ*WQHCPS
Trigger: AGAAGGACAGTGCTGCCACCACTGATGAGGAGCGGC...GCCACAGCTGACCTGTGTGGAAACAGGGCTTTTTATAACTAAAACCAGTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTACAAACTCGCCCAGGTaGAAGAGACCAACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KRRKQKEALKTVEPSRPSTNSPR*KRPTSC
Trigger: ACAGGAGGTTGGTCTCTTCCACCTGGGCGAGTTTGT...AGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp AAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTGAAGACCCTCCGCAGTaGCCACATAGATCTCTAATC +
Preference number: 4 (lower is better)
Translates to: KRRKQKEALKTVEPSRPSEDPPQ*PHRSLI
Trigger: GATTAGAGATCTATGTGGTCACTGCGGAGGGTCTTC...AGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp CAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCGATAGCCATCTGAGTTaGGAGGACACATATAGTTCA +
Preference number: 4 (lower is better)
Translates to: QKEALKTVEPSRPSSLYLDSHLS*EDTYSS
Trigger: TGAACTATATGTGTCCTCTCAACTCAGATGGCTATC...GAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp AACCTACATAGACAGTGGAGGACAAAGCACGAGTGTGAGGTATCACACACAGGTTGGCTGTGCCCACAATaGAGTAAGTGTTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: NLHRQWRTKHECEVSHTGWLCPQ*SKCWGL
Trigger: AAGACCCCAACACTTACTTCATTGTGGGCACAGCCA...ACCTGTGTGTGATACCTCACACTCGTGCTTTGTCCTCCACTGTCTATGTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR GCA 90 bp GAGGCAAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACAAGTCAATGCTGGCATaGTCATGGATTCCAATGCCG +
Preference number: 4 (lower is better)
Translates to: EAREESKRKLSRQWNPLDKSMLA*SWIPMP
Trigger: CGGCATTGGAATCCATGAGCATGCCAGCATTGACTT...GTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp ACACCATTCAAGGCTTGGTGGTCCAAGGTGATGGCTGGTAAAAATCCAGGGAGACGAATATGGAGCTTCTaGATCTCATCGATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TPFKAWWSKVMAGKNPGRRIWSF*ISSMVP
Trigger: TGGCACCATCGATGAGATCCAGAAGCTCCATATTCG...TCTCCCTGGATTTTTACCAGCCATCACCTTGGACCACCAAGCCTTGAATGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AACCTACATAGACAGTGGAGGACAAAGCACGAGTGTGAGGTATCACACACAGGTCCTCCACTGCTATCTTaGACTTCAATGCGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: NLHRQWRTKHECEVSHTGPPLLS*TSMRLE
Trigger: TTCCAGCCGCATTGAAGTCCAAGATAGCAGTGGAGG...ACCTGTGTGTGATACCTCACACTCGTGCTTTGTCCTCCACTGTCTATGTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp CAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCATAACTAGGGAGCCATaGCAGAACACATTGACAAAC +
Preference number: 4 (lower is better)
Translates to: QKEALKTVEPSRPSSLYLITREP*QNTLTN
Trigger: GTTTGTCAATGTGTTCTGCCATGGCTCCCTAGTTAT...GAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp AGTGAACTGGTTTTAGTTATAAAAAGCCCTGTTTCCACACAGGTCAGCTGTGGCTCCAAGGGCCCTTGTTaGACTCCTTCTCTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: SELVLVIKSPVSTQVSCGSKGPC*TPSLEE
Trigger: CTCTTCGAGAGAAGGAGTTCAACAAGGGCCCTTGGA...GCCACAGCTGACCTGTGTGGAAACAGGGCTTTTTATAACTAAAACCAGTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CCA 90 bp AGTGAACTGGTTTTAGTTATAAAAAGCCCTGTTTCCACACAGGTCAGCTGTGGCTGTTCCATCTCTGTGTaGCTGATTTGCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SELVLVIKSPVSTQVSCGCSISV*LICRSS
Trigger: GGAGCTCCGGCAAATCAGCCACACAGAGATGGAACA...GCCACAGCTGACCTGTGTGGAAACAGGGCTTTTTATAACTAAAACCAGTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR TCA 90 bp GAGGCAAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACGTTATGATAGGTGATTaGTTCCTGTCCAATGATGAT +
Preference number: 4 (lower is better)
Translates to: EAREESKRKLSRQWNPLDVMIGD*FLSNDD
Trigger: ATCATCATTGGACAGGAATCAATCACCTATCATAAC...GTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS TCA 90 bp AGGTCTCGTGAGGAGCCGTACTGCTGGAGAAAAGTTTGCTGGAGCTaGCGCTGCTGGACAGGGCCTGGGTGCTGGCACTGGGCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: RSREEPYCWRKVCWS*RCWTGPGCWHWASK
Trigger: CTTTGAGGCCCAGTGCCAGCACCCAGGCCCTGTCCAGCAGCGTCAGCTCCAGCAAACTTTTCTCCAGCAGTACGGCTCCTCACGAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGGATGAAGTCGCCCTaGGTCTTCAGGTACAGGGCC +
Preference number: 5 (lower is better)
Translates to: STQVSCGSRGRWLREKPPRMKSP*VFRYRA
Trigger: GGCCCTGTACCTGAAGACCAAGGGCGACTTCATCCT...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp GTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCTGCTGGACAGGGCCTaGGGCCTGAAGAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: VSTQVSCGSRGRWLREKPLLDRA*GLKSSM
Trigger: CATGGAGCTCTTCAGGCCCAAGGCCCTGTCCAGCAG...AGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCCTGCTGGAGAAAAGTTaGCTGGAGCTGACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: STQVSCGSRGRWLREKPPLLEKS*LELTLL
Trigger: CAGCAGCGTCAGCTCCAGCAAACTTTTCTCCAGCAG...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp AGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCATGCCAAAGGATGAAGTCGCCCTaGGTCTTCAGGTACAGGGCC +
Preference number: 5 (lower is better)
Translates to: RSAVALGAGGLGKSLPCQRMKSP*VFRYRA
Trigger: GGCCCTGTACCTGAAGACCAAGGGCGACTTCATCCT...TTGGCATGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp TCCCAGGTTTCCACTCAGGCAGCCCGTAGCCTGACAGGCCTCCAGGCTGATGTTCCATGGCAGAACACATaGACAAACTCGCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SQVSTQAARSLTGLQADVPWQNT*TNSPRW
Trigger: CCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATGG...AACATCAGCCTGGAGGCCTGTCAGGCTACGGGCTGCCTGAGTGGAAACCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCACCATGGCAGAACACATaGACAAACTCGCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPPWQNT*TNSPRW
Trigger: CCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATGG...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAGCCCTATCATGCCGTaGACTGTGCCAAAGAGCACC +
Preference number: 5 (lower is better)
Translates to: STQVSCGSRGRWLREKPPSPIMP*TVPKST
Trigger: GGTGCTCTTTGGCACAGTCAACGGCATGATAGGGCT...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTATGAACAGCAGGTCTTaGCTCTCCCCCTTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPMNSRS*LSPLGL
Trigger: CAGGCCCAAGGGGGAGAGCAAAGACCTGCTGTTCAT...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGTCCACTCGAAGGTCCTaGAGGGTGACAGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRSTRRS*RVTVPS
Trigger: GGATGGCACTGTCACCCTCAAGGACCTTCGAGTGGA...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp AGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCATGCCAAGCCTCCACTGCTATCTaGGACTTCAATGCGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RSAVALGAGGLGKSLPCQASTAI*DFNAAG
Trigger: TCCAGCCGCATTGAAGTCCAAGATAGCAGTGGAGGC...TTGGCATGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGGGGTCTTTACCCAACTaGCAGGAGACCAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKGSLPN*QETRLR
Trigger: CCTCAGCCTGGTCTCCTGCAAGTTGGGTAAAGACCC...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp CTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCACAAGCCGCACCGTGCTATaGATGCTGGCAAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LKTVEPSRPSSLYLNLPTSRTVL*MLASSF
Trigger: GAAGCTGCTTGCCAGCATCAATAGCACGGTGCGGCT...TGTGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTAGCCGCACCGTGCTATaGATGCTGGCAAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPSRTVL*MLASSF
Trigger: GAAGCTGCTTGCCAGCATCAATAGCACGGTGCGGCT...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp CCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCATGTTTCCAAGGGCCCTaGTTGAACTCCTTCTCTCGA +
Preference number: 5 (lower is better)
Translates to: PHRSAVALGAGGLGKSLPCFQGP*LNSFSR
Trigger: TCGAGAGAAGGAGTTCAACAAGGGCCCTTGGAAACA...TGGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp TCCCAGGTTTCCACTCAGGCAGCCCGTAGCCTGACAGGCCTCCAGGCTGATGTTGAGCAAGCAAAGACGTaGGTGGTAGAAAGAGAACGG +
Preference number: 5 (lower is better)
Translates to: SQVSTQAARSLTGLQADVEQAKT*VVERER
Trigger: CCGTTCTCTTTCTACCACCAACGTCTTTGCTTGCTC...AACATCAGCCTGGAGGCCTGTCAGGCTACGGGCTGCCTGAGTGGAAACCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp GTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTACAATACGACCCTGCTaGGGCTCTGCCTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: VSTQVSCGSRGRWLREKPTIRPC*GSASSG
Trigger: TCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTGT...AGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTAGCCCTATCATGCCGTaGACTGTGCCAAAGAGCACC +
Preference number: 5 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPSPIMP*TVPKST
Trigger: GGTGCTCTTTGGCACAGTCAACGGCATGATAGGGCT...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp TCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCCTCCCAAGGAGTGCTCAATCTaGCCCACGCTTTTGATGACC +
Preference number: 5 (lower is better)
Translates to: STQVSCGSRGRWLREKPPKECSI*PTLLMT
Trigger: GGTCATCAAAAGCGTGGGCAAGATTGAGCACTCCTT...GGGAGGCTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS TCA 90 bp CATCCGTCTCCCGACCGGGGTCAGAGCGCAGAGGCCATAAACCTTTaGTGCCTGGTAAGTCAATGCTGGCATGCTCATGGATTCCAATGC +
Preference number: 5 (lower is better)
Translates to: HPSPDRGQSAEAINL*CLVSQCWHAHGFQC
Trigger: GCATTGGAATCCATGAGCATGCCAGCATTGACTTACCAGGCATCAAAGGTTTATGGCCTCTGCGCTCTGACCCCGGTCGGGAGACGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS GCA 90 bp AAGAGCACCGAGCCCTGTGTAGGGGTAGAAGCCTCGCCCAGATTCTaGATAACTAGGGAGCCATGGCAGAACACATTGACAAACTCGCCC +
Preference number: 5 (lower is better)
Translates to: KSTEPCVGVEASPRF*ITREPWQNTLTNSP
Trigger: GGGCGAGTTTGTCAATGTGTTCTGCCATGGCTCCCTAGTTATGCAGAATCTGGGCGAGGCTTCTACCCCTACACAGGGCTCGGTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp CTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCACAATGCGGTCCTGGACATaGCCATGGGCTCTTGTAATG +
Preference number: 5 (lower is better)
Translates to: LKTVEPSRPSSLYLNLPTMRSWT*PWALVM
Trigger: CATTACAAGAGCCCATGGCAATGTCCAGGACCGCAT...TGTGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp GTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGGTGGTCCAAGTTCCAAGGGCCCTTGTaGAACTCCTTCTCTCGAAGA +
Preference number: 5 (lower is better)
Translates to: VLPRRSQLATPFKAWWSKFQGPL*NSFSRR
Trigger: TCTTCGAGAGAAGGAGTTCAACAAGGGCCCTTGGAA...CTTGGACCACCAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp TCCCAGGTTTCCACTCAGGCAGCCCGTAGCCTGACAGGCCTCCAGGCTGATGTTCACTACATAGGAGCCTaGTTCGTTGCTGTCGACATT +
Preference number: 5 (lower is better)
Translates to: SQVSTQAARSLTGLQADVHYIGA*FVAVDI
Trigger: AATGTCGACAGCAACGAACAAGGCTCCTATGTAGTG...AACATCAGCCTGGAGGCCTGTCAGGCTACGGGCTGCCTGAGTGGAAACCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp CTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCACACGCAAGGAACCTTCCTaGAAAGCTCCAGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LKTVEPSRPSSLYLNLPTRKEPS*KAPEQV
Trigger: CACTTGCTCTGGAGCTTTCAAGGAAGGTTCCTTGCG...TGTGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp CTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAACCTCCCCAGGTGATCTGGATAAGTaGCTGATGAGCCACGTTGCC +
Preference number: 5 (lower is better)
Translates to: LSRQWNPLDPLPSTSTSPGDLDK*LMSHVA
Trigger: GGCAACGTGGCTCATCAGCAACTTATCCAGATCACC...TGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp CAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCGGGTCTTTACCCAACTaGCAGGAGACCAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: QKEALKTVEPSRPSSLYLGSLPN*QETRLR
Trigger: CCTCAGCCTGGTCTCCTGCAAGTTGGGTAAAGACCC...GAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS TCA 90 bp ATGAGGAGGTTGTGCACCTCCACTTCTTCTCCAAAGGAGGTCTCGTaGGGAGCCGTACTGCTGGAGAAAAGTTTGCTGGAGCTGACGCTG +
Preference number: 5 (lower is better)
Translates to: MRRLCTSTSSPKEVS*GAVLLEKSLLELTL
Trigger: CAGCGTCAGCTCCAGCAAACTTTTCTCCAGCAGTACGGCTCCTCACGAGACCTCCTTTGGAGAAGAAGTGGAGGTGCACAACCTCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS TCA 90 bp CTCTTCAAAGTTTCCTTCCATAGGCTTGTAGGCAAGCAGCAGCACTaGGCGCATGAGGTCGCCCACCAGGATGAAGTCGCCCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LFKVSFHRLVGKQQH*AHEVAHQDEVALGL
Trigger: AAGACCAAGGGCGACTTCATCCTGGTGGGCGACCTCATGCGCTCAGTGCTGCTGCTTGCCTACAAGCCTATGGAAGGAAACTTTGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CCA 90 bp ATAACTAGGGAGCCATGGCAGAACACATTGACAAACTCGCCCAGGTaGAAGAGACCAACCTCCTGTAGGTGCTGCCGCTCCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: ITREPWQNTLTNSPR*KRPTSCRCCRSSSV
Trigger: CACTGATGAGGAGCGGCAGCACCTACAGGAGGTTGGTCTCTTCCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATGGCTCCCTAGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CCA 90 bp GTAGGGGTAGAAGCCTCGCCCAGATTCTGCATAACTAGGGAGCCATaGCAGAACACATTGACAAACTCGCCCAGGTGGAAGAGACCAACC +
Preference number: 5 (lower is better)
Translates to: VGVEASPRFCITREP*QNTLTNSPRWKRPT
Trigger: GGTTGGTCTCTTCCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATGGCTCCCTAGTTATGCAGAATCTGGGCGAGGCTTCTACCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp AGTTCCCCGAGACAAAAGGGCTGTGGCTTGGGAATTCTCCACCATCCCAGGTTTACAATACGACCCTGCTaGGGCTCTGCCTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SSPRQKGCGLGILHHPRFTIRPC*GSASSG
Trigger: TCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTGT...AAACCTGGGATGGTGGAGAATTCCCAAGCCACAGCCCTTTTGTCTCGGGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTAGCTCCTCCACGACTTaGATGAGGTCATCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPSSSTT*MRSSAV
Trigger: AACTGCAGATGACCTCATCAAAGTCGTGGAGGAGCT...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS TCA 90 bp GCTTGGGCTCTGCCTCTTCAGGATATACCATGGCTGTGCCCACAATaGAGTAAGTGTTGGGGTCTTTACCCAACTTGCAGGAGACCAGGC +
Preference number: 5 (lower is better)
Translates to: AWALPLQDIPWLCPQ*SKCWGLYPTCRRPG
Trigger: GCCTGGTCTCCTGCAAGTTGGGTAAAGACCCCAACACTTACTTCATTGTGGGCACAGCCATGGTATATCCTGAAGAGGCAGAGCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS GCA 90 bp AGGAGTTCCACTCGAAGGTCCTTGAGGGTGACAGTGCCATCCATCTaGTCCTCCTTCTCTAAGAGCAGCATGAAAAGCCGTCCCTCCATA +
Preference number: 5 (lower is better)
Translates to: RSSTRRSLRVTVPSI*SSFSKSSMKSRPSI
Trigger: TATGGAGGGACGGCTTTTCATGCTGCTCTTAGAGAAGGAGGAGCAGATGGATGGCACTGTCACCCTCAAGGACCTTCGAGTGGAACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS-3UTR CAA 90 bp GAGGCAAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACTCTTTGCTCTCCCCCTaGGGCCTGAAGAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: EAREESKRKLSRQWNPLDSLLSP*GLKSSM
Trigger: CATGGAGCTCTTCAGGCCCAAGGGGGAGAGCAAAGA...GTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp AAAGCCCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGGCAAATGGTAGGTGCTaGACAACCATACAGGAACTT +
Preference number: 5 (lower is better)
Translates to: KALFPHRSAVALGAGGLGANGRC*TTIQEL
Trigger: AAGTTCCTGTATGGTTGTCAAGCACCTACCATTTGC...CCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGCCACCCAGCATCTCCTaGTGTAGTAGTTCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRPPSIS*CSSSKD
Trigger: ATCCTTTGAACTACTACACAAGGAGATGCTGGGTGG...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp AAAGCCTCCCATGCCAAGAAAACAAGGGTGGGCAAGGGAGGGGAGGATAGGAGGATCTTGCCCACGCTTTaGATGACCTTATTGAGTCGG +
Preference number: 5 (lower is better)
Translates to: KASHAKKTRVGKGGEDRRILPTL*MTLLSR
Trigger: CCGACTCAATAAGGTCATCAAAAGCGTGGGCAAGAT...CCTCCTATCCTCCCCTCCCTTGCCCACCCTTGTTTTCTTGGCATGGGAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGCATCATACTGCAAGTTaGCCACAACCTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKHHTAS*PQPPAS
Trigger: AGATGCAGGAGGTTGTGGCAAACTTGCAGTATGATG...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTCATCATACTGCAAGTTaGCCACAACCTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPHHTAS*PQPPAS
Trigger: AGATGCAGGAGGTTGTGGCAAACTTGCAGTATGATG...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS GCA 90 bp CGCAGAGGCCATAAACCTTTGATGCCTGGTAAGTCAATGCTGGCATaGTCATGGATTCCAATGCCGTTCCGGATGATCCGCAAGGAACCT +
Preference number: 5 (lower is better)
Translates to: RRGHKPLMPGKSMLA*SWIPMPFRMIRKEP
Trigger: AGGTTCCTTGCGGATCATCCGGAACGGCATTGGAATCCATGAGCATGCCAGCATTGACTTACCAGGCATCAAAGGTTTATGGCCTCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp CCTGTTTCCACACAGGTCAGCTGTGGCTCTAGGGGCAGGTGGCTTAGGGAAAAGACAATGGGTCCTAAATaGGTAAAGGTTTCCATGGCC +
Preference number: 5 (lower is better)
Translates to: PVSTQVSCGSRGRWLREKTMGPK*VKVSMA
Trigger: GGCCATGGAAACCTTTACCAATTTAGGACCCATTGT...CTTTTCCCTAAGCCACCTGCCCCTAGAGCCACAGCTGACCTGTGTGGAAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp AGTTCCCCGAGACAAAAGGGCTGTGGCTTGGGAATTCTCCACCATCCCAGGTTTCAAAGCTTTGGGCTCTaGAGACACCAACCTCACAGA +
Preference number: 5 (lower is better)
Translates to: SSPRQKGCGLGILHHPRFQSFGL*RHQPHR
Trigger: TCTGTGAGGTTGGTGTCTCAAGAGCCCAAAGCTTTG...AAACCTGGGATGGTGGAGAATTCCCAAGCCACAGCCCTTTTGTCTCGGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp GAGGCAAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCTGCTGGAGAAAAGTTaGCTGGAGCTGACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EAREESKRKLSRQWNPLDLLEKS*LELTLL
Trigger: CAGCAGCGTCAGCTCCAGCAAACTTTTCTCCAGCAG...GTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp GGAGGGGAGGATAGGAGGGCAACGCCTTTAGGGAGGGTCAGGAAAAGAGATCCTCTTTTGATGACCTTATaGAGTCGGTTCTGCATGTCC +
Preference number: 5 (lower is better)
Translates to: GGEDRRATPLGRVRKRDPLLMTL*SRFCMS
Trigger: GGACATGCAGAACCGACTCAATAAGGTCATCAAAAG...AGGATCTCTTTTCCTGACCCTCCCTAAAGGCGTTGCCCTCCTATCCTCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp AGTGACAAAAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGAAGGAGTGCTCAATCTaGCCCACGCTTTTGATGACC +
Preference number: 5 (lower is better)
Translates to: SDKSPPQEEPTGNTIQGLKECSI*PTLLMT
Trigger: GGTCATCAAAAGCGTGGGCAAGATTGAGCACTCCTT...CAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTTTTGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp CAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCAGCTCCTCCACGACTTaGATGAGGTCATCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: QKEALKTVEPSRPSSLYLSSSTT*MRSSAV
Trigger: AACTGCAGATGACCTCATCAAAGTCGTGGAGGAGCT...GAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CCA 90 bp GGCCATAAACCTTTGATGCCTGGTAAGTCAATGCTGGCATGCTCATaGATTCCAATGCCGTTCCGGATGATCCGCAAGGAACCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GHKPLMPGKSMLACS*IPMPFRMIRKEPSL
Trigger: CAAGGAAGGTTCCTTGCGGATCATCCGGAACGGCATTGGAATCCATGAGCATGCCAGCATTGACTTACCAGGCATCAAAGGTTTATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CCA 90 bp ACGTTGGTGGTAGAAAGAGAACGGAATGTCCTCAACACCGTGGGCTaGGTGCCCAAAGTCACCTTTTTACGGTCACTCAGTAAACCTGTC +
Preference number: 5 (lower is better)
Translates to: TLVVERERNVLNTVG*VPKVTFLRSLSKPV
Trigger: GACAGGTTTACTGAGTGACCGTAAAAAGGTGACTTTGGGCACCCAGCCCACGGTGTTGAGGACATTCCGTTCTCTTTCTACCACCAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp CAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTTCCCTCTACCTCGCCTTGAGCTCTTTATaGTCTCGGTCTAGTGGAATG +
Preference number: 5 (lower is better)
Translates to: QKEALKTVEPSRPSSLYLALSSL*SRSSGM
Trigger: CATTCCACTAGACCGAGACAATAAAGAGCTCAAGGC...GAGGTAGAGGGAAGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS TCA 90 bp CTGTGCGAATATGGAGCTTCTGGATCTCATCGATGGTGCCAATGGTaGGAGTGCTGTTATTGGCCAATGCCAGACTGTCAGGATAGCCAT +
Preference number: 5 (lower is better)
Translates to: LCEYGASGSHRWCQW*ECCYWPMPDCQDSH
Trigger: ATGGCTATCCTGACAGTCTGGCATTGGCCAATAACAGCACTCTCACCATTGGCACCATCGATGAGATCCAGAAGCTCCATATTCGCACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS GCA 90 bp CACATGCCGCCCCTGAGGATCCTGGTAGACAAAGCAAATGGTAGGTaGTTGACAACCATACAGGAACTTGACATCAATGACGTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: HMPPLRILVDKANGR*LTTIQELDINDVQF
Trigger: GAACTGCACGTCATTGATGTCAAGTTCCTGTATGGTTGTCAAGCACCTACCATTTGCTTTGTCTACCAGGATCCTCAGGGGCGGCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS GCA 90 bp GTCTGTAGTTTTCCATCTGAATACTGGAAGACCACAATACGACCCTaGTTGGGCTCTGCCTCTTCAGGATATACCATGGCTGTGCCCACA +
Preference number: 5 (lower is better)
Translates to: VCSFPSEYWKTTIRP*LGSASSGYTMAVPT
Trigger: TGTGGGCACAGCCATGGTATATCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTGTGGTCTTCCAGTATTCAGATGGAAAACTACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp AGTGACAAAAGTCCTCCCCAGGAGGAGCCAACTGGCAACACCATTCAAGGCTTGCAACCATACAGGAACTaGACATCAATGACGTGCAGT +
Preference number: 5 (lower is better)
Translates to: SDKSPPQEEPTGNTIQGLQPYRN*TSMTCS
Trigger: ACTGCACGTCATTGATGTCAAGTTCCTGTATGGTTG...CAAGCCTTGAATGGTGTTGCCAGTTGGCTCCTCCTGGGGAGGACTTTTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CCA 90 bp ATATCTCCCAGAAGGTACCGCGAGCCATTAGGATCCACCCGGTTATaGCACACAATAGTGCTTTGCTTAATGATAGGAGGAGCAATTGCC +
Preference number: 5 (lower is better)
Translates to: ISPRRYREPLGSTRL*HTIVLCLMIGGAIA
Trigger: GGCAATTGCTCCTCCTATCATTAAGCAAAGCACTATTGTGTGCCATAACCGGGTGGATCCTAATGGCTCGCGGTACCTTCTGGGAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS-3UTR CAA 90 bp GAGGCAAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACATCTTGCCCACGCTTTaGATGACCTTATTGAGTCGG +
Preference number: 5 (lower is better)
Translates to: EAREESKRKLSRQWNPLDILPTL*MTLLSR
Trigger: CCGACTCAATAAGGTCATCAAAAGCGTGGGCAAGAT...GTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS TCA 90 bp TTGAAGCTTCGGCTTCTACATTCTCCTGTTTCCAAGGGCCCTTGTTaGACTCCTTCTCTCGAAGAGACACCTCATAGGTTTTCACATGCC +
Preference number: 5 (lower is better)
Translates to: LKLRLLHSPVSKGPC*TPSLEETPHRFSHA
Trigger: GGCATGTGAAAACCTATGAGGTGTCTCTTCGAGAGAAGGAGTTCAACAAGGGCCCTTGGAAACAGGAGAATGTAGAAGCCGAAGCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS TCA 90 bp AGGAGGAGCAATTGCCAGGTATTTATCACCGTTATGATAGGTGATTaGTTCCTGTCCAATGATGATGGCACCTCCAAAAGGCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: RRSNCQVFITVMIGD*FLSNDDGTSKRLWD
Trigger: GTCCCAGAGCCTTTTGGAGGTGCCATCATCATTGGACAGGAATCAATCACCTATCATAACGGTGATAAATACCTGGCAATTGCTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS TCA 90 bp GAGAGTGCTGTTATTGGCCAATGCCAGACTGTCAGGATAGCCATCTaGGTTGAGAGGACACATATAGTTCACCTCCTTGAGGTTGACATT +
Preference number: 5 (lower is better)
Translates to: ESAVIGQCQTVRIAI*VERTHIVHLLEVDI
Trigger: AATGTCAACCTCAAGGAGGTGAACTATATGTGTCCTCTCAACTCAGATGGCTATCCTGACAGTCTGGCATTGGCCAATAACAGCACTCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp AAGAGAAGAAAGCAAAAGGAAGCTCTCAAGACAGTGGAACCCTCTCGACCCTCTGCACACAATAGTGCTTaGCTTAATGATAGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: KRRKQKEALKTVEPSRPSAHNSA*LNDRRS
Trigger: GCTCCTCCTATCATTAAGCAAAGCACTATTGTGTGC...AGAGGGTCGAGAGGGTTCCACTGTCTTGAGAGCTTCCTTTTGCTTTCTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS-3UTR CAA 90 bp AACCTACATAGACAGTGGAGGACAAAGCACGAGTGTGAGGTATCACACACAGGTCTTTTGATGACCTTATaGAGTCGGTTCTGCATGTCC +
Preference number: 5 (lower is better)
Translates to: NLHRQWRTKHECEVSHTGLLMTL*SRFCMS
Trigger: GGACATGCAGAACCGACTCAATAAGGTCATCAAAAG...ACCTGTGTGTGATACCTCACACTCGTGCTTTGTCCTCCACTGTCTATGTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS GCA 90 bp GCCAAAGTCACCTTTAAGAGGCTGGTAGACAAAGCAAATGGTAGGTaGTTGACAACCATACAGGAACTTGACATCAATGACGTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: AKVTFKRLVDKANGR*LTTIQELDINDVQF
Trigger: GAACTGCACGTCATTGATGTCAAGTTCCTGTATGGTTGTCAAGCACCTACCATTTGCTTTGTCTACCAGCCTCTTAAAGGTGACTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236280.2
CDS-3UTR CAA 90 bp AGTGAACTGGTTTTAGTTATAAAAAGCCCTGTTTCCACACAGGTCAGCTGTGGCTTCACCTCCTTGAGGTaGACATTGGAGAAGACCAAC +
Preference number: 5 (lower is better)
Translates to: SELVLVIKSPVSTQVSCGFTSLR*TLEKTN
Trigger: GTTGGTCTTCTCCAATGTCAACCTCAAGGAGGTGAA...GCCACAGCTGACCTGTGTGGAAACAGGGCTTTTTATAACTAAAACCAGTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS GCA 90 bp GGCATTTTCAGCTCCCAGAAAATTGTCATCATCCAAGATCTCCACTaGACTCATCCAGTTGGGATTAAAGTCTCGGGCAATCTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: GIFSSQKIVIIQDLH*THPVGIKVSGNLFK
Trigger: TTTGAAGAGATTGCCCGAGACTTTAATCCCAACTGGATGAGTGCAGTGGAGATCTTGGATGATGACAATTTTCTGGGAGCTGAAAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS GCA 90 bp TTCATACCACTGCCATCATCATACTGCAAGTTTGCCACAACCTCCTaGATCTTAGGGCGGCTGATATCTAGGAAACTTTCAATCAGATCA +
Preference number: 5 (lower is better)
Translates to: FIPLPSSYCKFATTS*ILGRLISRKLSIRS
Trigger: TGATCTGATTGAAAGTTTCCTAGATATCAGCCGCCCTAAGATGCAGGAGGTTGTGGCAAACTTGCAGTATGATGATGGCAGTGGTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS-3UTR CAA 90 bp AGTGAACTGGTTTTAGTTATAAAAAGCCCTGTTTCCACACAGGTCAGCTGTGGCAGAGGCCATAAACCTTaGATGCCTGGTAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: SELVLVIKSPVSTQVSCGRGHKP*MPGKSM
Trigger: CATTGACTTACCAGGCATCAAAGGTTTATGGCCTCT...GCCACAGCTGACCTGTGTGGAAACAGGGCTTTTTATAACTAAAACCAGTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS GCA 90 bp ACATTGCCATGGGCTCTTGTAATGATGTCAATGCTTTCGCCACTCTaGTTATACTCCAAGATACAGGCATTGTATTTAGCAGTCAAGATG +
Preference number: 5 (lower is better)
Translates to: TLPWALVMMSMLSPL*LYSKIQALYLAVKM
Trigger: CATCTTGACTGCTAAATACAATGCCTGTATCTTGGAGTATAAGCAGAGTGGCGAAAGCATTGACATCATTACAAGAGCCCATGGCAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS GCA 72 bp TCGCCCAGGTGGAAGAGACCAACCTCCTGTAGGTGCTaGCGCTCCTCATCAGTGGTGGCAGCACTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: SPRWKRPTSCRC*RSSSVVAALSF
Trigger: GAAGGACAGTGCTGCCACCACTGATGAGGAGCGGCAGCACCTACAGGAGGTTGGTCTCTTCCACCTGGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS GCA 72 bp AACTCGCCCAGGTGGAAGAGACCAACCTCCTGTAGGTaGTGCCGCTCCTCATCAGTGGTGGCAGCACTGTCC +
Preference number: 6 (lower is better)
Translates to: NSPRWKRPTSCR*CRSSSVVAALS
Trigger: GGACAGTGCTGCCACCACTGATGAGGAGCGGCAGCACCTACAGGAGGTTGGTCTCTTCCACCTGGGCGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS TCA 72 bp GTTTCCTTCCATAGGCTTGTAGGCAAGCAGCAGCACTaGGCGCATGAGGTCGCCCACCAGGATGAAGTCGCC +
Preference number: 6 (lower is better)
Translates to: VSFHRLVGKQQH*AHEVAHQDEVA
Trigger: GGCGACTTCATCCTGGTGGGCGACCTCATGCGCTCAGTGCTGCTGCTTGCCTACAAGCCTATGGAAGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CCA 72 bp GAGCCATGGCAGAACACATTGACAAACTCGCCCAGGTaGAAGAGACCAACCTCCTGTAGGTGCTGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: EPWQNTLTNSPR*KRPTSCRCCRS
Trigger: GGAGCGGCAGCACCTACAGGAGGTTGGTCTCTTCCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 90 bp GGTGCTGGCACTGGGCCTCAAAGCAGTAGTGCCTCCACTGCTATCTaGGACTTCAATGCGGCTGGAAAGGACCCCAAAGCACTGAGACAC +
Preference number: 6 (lower is better)
Translates to: GAGTGPQSSSASTAI*DFNAAGKDPKALRH
Trigger: GTGTCTCAGTGCTTTGGGGTCCTTTCCAGCCGCATTGAAGTCCAAGATAGCAGTGGAGGCACTACTGCTTTGAGGCCCAGTGCCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS TCA 72 bp CCCGACCGGGGTCAGAGCGCAGAGGCCATAAACCTTTaGTGCCTGGTAAGTCAATGCTGGCATGCTCATGGA +
Preference number: 6 (lower is better)
Translates to: PDRGQSAEAINL*CLVSQCWHAHG
Trigger: TCCATGAGCATGCCAGCATTGACTTACCAGGCATCAAAGGTTTATGGCCTCTGCGCTCTGACCCCGGTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CAA 72 bp ATGGAGGTCTCTCCGAGGAGTTCCACTCGAAGGTCCTaGAGGGTGACAGTGCCATCCATCTGCTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: MEVSPRSSTRRS*RVTVPSICSSF
Trigger: GAAGGAGGAGCAGATGGATGGCACTGTCACCCTCAAGGACCTTCGAGTGGAACTCCTCGGAGAGACCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS CAA 72 bp TCCCGACCGGGGTCAGAGCGCAGAGGCCATAAACCTTaGATGCCTGGTAAGTCAATGCTGGCATGCTCATGG +
Preference number: 6 (lower is better)
Translates to: SRPGSERRGHKP*MPGKSMLACSW
Trigger: CCATGAGCATGCCAGCATTGACTTACCAGGCATCAAAGGTTTATGGCCTCTGCGCTCTGACCCCGGTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CAA 90 bp CACTCAGCAATGGAGGTCTCTCCGAGGAGTTCCACTCGAAGGTCCTaGAGGGTGACAGTGCCATCCATCTGCTCCTCCTTCTCTAAGAGC +
Preference number: 6 (lower is better)
Translates to: HSAMEVSPRSSTRRS*RVTVPSICSSFSKS
Trigger: GCTCTTAGAGAAGGAGGAGCAGATGGATGGCACTGTCACCCTCAAGGACCTTCGAGTGGAACTCCTCGGAGAGACCTCCATTGCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS CAA 90 bp GCCTCGCCCAGATTCTGCATAACTAGGGAGCCATGGCAGAACACATaGACAAACTCGCCCAGGTGGAAGAGACCAACCTCCTGTAGGTGC +
Preference number: 6 (lower is better)
Translates to: ASPRFCITREPWQNT*TNSPRWKRPTSCRC
Trigger: GCACCTACAGGAGGTTGGTCTCTTCCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATGGCTCCCTAGTTATGCAGAATCTGGGCGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CCA 72 bp TCCGAGGGGCGACCAATGCGGTCCTGGACATTGCCATaGGCTCTTGTAATGATGTCAATGCTTTCGCCACTC +
Preference number: 6 (lower is better)
Translates to: SEGRPMRSWTLP*ALVMMSMLSPL
Trigger: GAGTGGCGAAAGCATTGACATCATTACAAGAGCCCATGGCAATGTCCAGGACCGCATTGGTCGCCCCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS CCA 72 bp GACCAACCTCCTGTAGGTGCTGCCGCTCCTCATCAGTaGTGGCAGCACTGTCCTTCTGACACACAAACAAGT +
Preference number: 6 (lower is better)
Translates to: DQPPVGAAAPHQ*WQHCPSDTQTS
Trigger: ACTTGTTTGTGTGTCAGAAGGACAGTGCTGCCACCACTGATGAGGAGCGGCAGCACCTACAGGAGGTTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 90 bp TCATCCGTCTCCCGACCGGGGTCAGAGCGCAGAGGCCATAAACCTTaGATGCCTGGTAAGTCAATGCTGGCATGCTCATGGATTCCAATG +
Preference number: 6 (lower is better)
Translates to: SSVSRPGSERRGHKP*MPGKSMLACSWIPM
Trigger: CATTGGAATCCATGAGCATGCCAGCATTGACTTACCAGGCATCAAAGGTTTATGGCCTCTGCGCTCTGACCCCGGTCGGGAGACGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CCA 72 bp GACTGCAATCTTCCCGTACATTCCCACCTCTTTGACTaGCCGAAGACCCTCCGCAGTGACCACATAGATCTC +
Preference number: 6 (lower is better)
Translates to: DCNLPVHSHLFD*PKTLRSDHIDL
Trigger: GAGATCTATGTGGTCACTGCGGAGGGTCTTCGGCCAGTCAAAGAGGTGGGAATGTACGGGAAGATTGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
ENSMUST00000237337.2
CDS CCA 72 bp GAAGCCTCGCCCAGATTCTGCATAACTAGGGAGCCATaGCAGAACACATTGACAAACTCGCCCAGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: EASPRFCITREP*QNTLTNSPRWK
Trigger: CTTCCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATGGCTCCCTAGTTATGCAGAATCTGGGCGAGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 72 bp ACTGGGCCTCAAAGCAGTAGTGCCTCCACTGCTATCTaGGACTTCAATGCGGCTGGAAAGGACCCCAAAGCA +
Preference number: 6 (lower is better)
Translates to: TGPQSSSASTAI*DFNAAGKDPKA
Trigger: TGCTTTGGGGTCCTTTCCAGCCGCATTGAAGTCCAAGATAGCAGTGGAGGCACTACTGCTTTGAGGCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS TCA 72 bp TTGTGCACCTCCACTTCTTCTCCAAAGGAGGTCTCGTaGGGAGCCGTACTGCTGGAGAAAAGTTTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LCTSTSSPKEVS*GAVLLEKSLLE
Trigger: CTCCAGCAAACTTTTCTCCAGCAGTACGGCTCCTCACGAGACCTCCTTTGGAGAAGAAGTGGAGGTGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS GCA 72 bp ACTCGAAGGTCCTTGAGGGTGACAGTGCCATCCATCTaGTCCTCCTTCTCTAAGAGCAGCATGAAAAGCCGT +
Preference number: 6 (lower is better)
Translates to: TRRSLRVTVPSI*SSFSKSSMKSR
Trigger: ACGGCTTTTCATGCTGCTCTTAGAGAAGGAGGAGCAGATGGATGGCACTGTCACCCTCAAGGACCTTCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS CCA 72 bp TCAGGATACGAGCTGAGATGTCTGTCCAAAGTCCAATaGCACAAAGTGGGGAGAGGCCATTGCTGTCCCCTA +
Preference number: 6 (lower is better)
Translates to: SGYELRCLSKVQ*HKVGRGHCCPL
Trigger: TAGGGGACAGCAATGGCCTCTCCCCACTTTGTGCCATTGGACTTTGGACAGACATCTCAGCTCGTATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236328.2
CDS TCA 72 bp GGCACCTCCAAAAGGCTCTGGGACTGCTATCACCATTaGAGCTTCGGCTTCTACATTCTCCTGTTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: GTSKRLWDCYHH*SFGFYILLFPR
Trigger: CCTTGGAAACAGGAGAATGTAGAAGCCGAAGCTTCAATGGTGATAGCAGTCCCAGAGCCTTTTGGAGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS GCA 72 bp ATACTGGAAGACCACAATACGACCCTGCTTGGGCTCTaGCTCTTCAGGATATACCATGGCTGTGCCCACAAT +
Preference number: 6 (lower is better)
Translates to: ILEDHNTTLLGL*LFRIYHGCAHN
Trigger: ATTGTGGGCACAGCCATGGTATATCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTGTGGTCTTCCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CCA 72 bp CCTTGTTCGTTGCTGTCGACATTGAGCTTTACGAGCTaGGAGTCACCTAGGCGAGACCCGACAAATACAACA +
Preference number: 6 (lower is better)
Translates to: PCSLLSTLSFTS*ESPRRDPTNTT
Trigger: TGTTGTATTTGTCGGGTCTCGCCTAGGTGACTCCCAGCTCGTAAAGCTCAATGTCGACAGCAACGAACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS CCA 72 bp CCTTTGATGCCTGGTAAGTCAATGCTGGCATGCTCATaGATTCCAATGCCGTTCCGGATGATCCGCAAGGAA +
Preference number: 6 (lower is better)
Translates to: PLMPGKSMLACS*IPMPFRMIRKE
Trigger: TTCCTTGCGGATCATCCGGAACGGCATTGGAATCCATGAGCATGCCAGCATTGACTTACCAGGCATCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CCA 72 bp GTAGAAAGAGAACGGAATGTCCTCAACACCGTGGGCTaGGTGCCCAAAGTCACCTTTTTACGGTCACTCAGT +
Preference number: 6 (lower is better)
Translates to: VERERNVLNTVG*VPKVTFLRSLS
Trigger: ACTGAGTGACCGTAAAAAGGTGACTTTGGGCACCCAGCCCACGGTGTTGAGGACATTCCGTTCTCTTTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CCA 72 bp CATCTGAATACTGGAAGACCACAATACGACCCTGCTTaGGCTCTGCCTCTTCAGGATATACCATGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: HLNTGRPQYDPA*ALPLQDIPWLC
Trigger: GCACAGCCATGGTATATCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTGTGGTCTTCCAGTATTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 72 bp CCATCTGAATACTGGAAGACCACAATACGACCCTGCTaGGGCTCTGCCTCTTCAGGATATACCATGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PSEYWKTTIRPC*GSASSGYTMAV
Trigger: CACAGCCATGGTATATCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTGTGGTCTTCCAGTATTCAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 72 bp AGATTCTGCATAACTAGGGAGCCATGGCAGAACACATaGACAAACTCGCCCAGGTGGAAGAGACCAACCTCC +
Preference number: 6 (lower is better)
Translates to: RFCITREPWQNT*TNSPRWKRPTS
Trigger: GGAGGTTGGTCTCTTCCACCTGGGCGAGTTTGTCAATGTGTTCTGCCATGGCTCCCTAGTTATGCAGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 90 bp ATGCCGCCCCTGAGGATCCTGGTAGACAAAGCAAATGGTAGGTGCTaGACAACCATACAGGAACTTGACATCAATGACGTGCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: MPPLRILVDKANGRC*TTIQELDINDVQFL
Trigger: GAGGAACTGCACGTCATTGATGTCAAGTTCCTGTATGGTTGTCAAGCACCTACCATTTGCTTTGTCTACCAGGATCCTCAGGGGCGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS TCA 72 bp CATTGGAGAAGACCAACTTGTGATTGCTGCTATAGATaGCAGTGGGCCGGTCAGAGCAAGCAAAGACGTTGG +
Preference number: 6 (lower is better)
Translates to: HWRRPTCDCCYR*QWAGQSKQRRW
Trigger: CCAACGTCTTTGCTTGCTCTGACCGGCCCACTGTCATCTATAGCAGCAATCACAAGTTGGTCTTCTCCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS TCA 72 bp CTGCCTCTTCAGGATATACCATGGCTGTGCCCACAATaGAGTAAGTGTTGGGGTCTTTACCCAACTTGCAGG +
Preference number: 6 (lower is better)
Translates to: LPLQDIPWLCPQ*SKCWGLYPTCR
Trigger: CCTGCAAGTTGGGTAAAGACCCCAACACTTACTTCATTGTGGGCACAGCCATGGTATATCCTGAAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS GCA 72 bp CATAAACCTTTGATGCCTGGTAAGTCAATGCTGGCATaGTCATGGATTCCAATGCCGTTCCGGATGATCCGC +
Preference number: 6 (lower is better)
Translates to: HKPLMPGKSMLA*SWIPMPFRMIR
Trigger: GCGGATCATCCGGAACGGCATTGGAATCCATGAGCATGCCAGCATTGACTTACCAGGCATCAAAGGTTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS GCA 72 bp AAAGAGAACGGAATGTCCTCAACACCGTGGGCTGGGTaGCCAAAGTCACCTTTTTACGGTCACTCAGTAAAC +
Preference number: 6 (lower is better)
Translates to: KENGMSSTPWAG*PKSPFYGHSVN
Trigger: GTTTACTGAGTGACCGTAAAAAGGTGACTTTGGGCACCCAGCCCACGGTGTTGAGGACATTCCGTTCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CAA 90 bp TGTAGTTTTCCATCTGAATACTGGAAGACCACAATACGACCCTGCTaGGGCTCTGCCTCTTCAGGATATACCATGGCTGTGCCCACAATG +
Preference number: 6 (lower is better)
Translates to: CSFPSEYWKTTIRPC*GSASSGYTMAVPTM
Trigger: CATTGTGGGCACAGCCATGGTATATCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTGTGGTCTTCCAGTATTCAGATGGAAAACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 90 bp CTCCAGAAGGAGTGCTCAATCTTGCCCACGCTTTTGATGACCTTATaGAGTCGGTTCTGCATGTCCAACAGGAGGTTATACCAGCTCTCT +
Preference number: 6 (lower is better)
Translates to: LQKECSILPTLLMTL*SRFCMSNRRLYQLS
Trigger: AGAGAGCTGGTATAACCTCCTGTTGGACATGCAGAACCGACTCAATAAGGTCATCAAAAGCGTGGGCAAGATTGAGCACTCCTTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS TCA 72 bp TCAGTTCTGTCTCTTCCACTTCCTCTCCGTTTAGCATaGGAACTCTTGTCTGGCCCACAAAAGAGAGCACCA +
Preference number: 6 (lower is better)
Translates to: SVLSLPLPLRLA*ELLSGPQKRAP
Trigger: TGGTGCTCTCTTTTGTGGGCCAGACAAGAGTTCTCATGCTAAACGGAGAGGAAGTGGAAGAGACAGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236328.2
CDS GCA 72 bp TTTCCATCTGAATACTGGAAGACCACAATACGACCCTaGTTGGGCTCTGCCTCTTCAGGATATACCATGGCT +
Preference number: 6 (lower is better)
Translates to: FPSEYWKTTIRP*LGSASSGYTMA
Trigger: AGCCATGGTATATCCTGAAGAGGCAGAGCCCAAGCAGGGTCGTATTGTGGTCTTCCAGTATTCAGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CCA 72 bp AGAAGGTACCGCGAGCCATTAGGATCCACCCGGTTATaGCACACAATAGTGCTTTGCTTAATGATAGGAGGA +
Preference number: 6 (lower is better)
Translates to: RRYREPLGSTRL*HTIVLCLMIGG
Trigger: TCCTCCTATCATTAAGCAAAGCACTATTGTGTGCCATAACCGGGTGGATCCTAATGGCTCGCGGTACCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS CCA 72 bp CAACACCATTATCAAGATAAGTTAGGCACTCAGCAATaGAGGTCTCTCCGAGGAGTTCCACTCGAAGGTCCT +
Preference number: 6 (lower is better)
Translates to: QHHYQDKLGTQQ*RSLRGVPLEGP
Trigger: AGGACCTTCGAGTGGAACTCCTCGGAGAGACCTCCATTGCTGAGTGCCTAACTTATCTTGATAATGGTGTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS TCA 72 bp TGTGTTTTTAGCAATCAACAGGTTCAGATCTTCCGCTaGAGTAAAGTGTCCGGTCACACAGCCGTTCACTGC +
Preference number: 6 (lower is better)
Translates to: CVFSNQQVQIFR*SKVSGHTAVHC
Trigger: GCAGTGAACGGCTGTGTGACCGGACACTTTACTTCAGCGGAAGATCTGAACCTGTTGATTGCTAAAAACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
ENSMUST00000237337.2
CDS GCA 72 bp CCCCTGAGGATCCTGGTAGACAAAGCAAATGGTAGGTaGTTGACAACCATACAGGAACTTGACATCAATGAC +
Preference number: 6 (lower is better)
Translates to: PLRILVDKANGR*LTTIQELDIND
Trigger: GTCATTGATGTCAAGTTCCTGTATGGTTGTCAAGCACCTACCATTTGCTTTGTCTACCAGGATCCTCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CCA 72 bp ACTTTCAATCAGATCACCATCGATGAAGCCTGTGGCTaGTTCTGTCTTTCGCTCAGTGTGAAAGGATCTCCA +
Preference number: 6 (lower is better)
Translates to: TFNQITIDEACG*FCLSLSVKGSP
Trigger: TGGAGATCCTTTCACACTGAGCGAAAGACAGAACCAGCCACAGGCTTCATCGATGGTGATCTGATTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 72 bp TCCTCTAGGCGGATGTTAAAGGCCTTGAGCTCTTTATaGTCTCGGTCTAGTGGAATGACCTTGAAAAGGCCA +
Preference number: 6 (lower is better)
Translates to: SSRRMLKALSSL*SRSSGMTLKRP
Trigger: TGGCCTTTTCAAGGTCATTCCACTAGACCGAGACAATAAAGAGCTCAAGGCCTTTAACATCCGCCTAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS CAA 72 bp ATTGGTAAAGGTTTCCATGGCCACTACATAGGAGCCTaGTTCGTTGCTGTCGACATTGAGCTTTACGAGCTG +
Preference number: 6 (lower is better)
Translates to: IGKGFHGHYIGA*FVAVDIELYEL
Trigger: CAGCTCGTAAAGCTCAATGTCGACAGCAACGAACAAGGCTCCTATGTAGTGGCCATGGAAACCTTTACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS CAA 72 bp GAGTGCTCAATCTTGCCCACGCTTTTGATGACCTTATaGAGTCGGTTCTGCATGTCCAACAGGAGGTTATAC +
Preference number: 6 (lower is better)
Translates to: ECSILPTLLMTL*SRFCMSNRRLY
Trigger: GTATAACCTCCTGTTGGACATGCAGAACCGACTCAATAAGGTCATCAAAAGCGTGGGCAAGATTGAGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 90 bp TTGACATCAATGACGTGCAGTTCCTCTAGGCGGATGTTAAAGGCCTaGAGCTCTTTATTGTCTCGGTCTAGTGGAATGACCTTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: LTSMTCSSSRRMLKA*SSLLSRSSGMTLKR
Trigger: CCTTTTCAAGGTCATTCCACTAGACCGAGACAATAAAGAGCTCAAGGCCTTTAACATCCGCCTAGAGGAACTGCACGTCATTGATGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS GCA 72 bp AGCTCCCAGAAAATTGTCATCATCCAAGATCTCCACTaGACTCATCCAGTTGGGATTAAAGTCTCGGGCAAT +
Preference number: 6 (lower is better)
Translates to: SSQKIVIIQDLH*THPVGIKVSGN
Trigger: ATTGCCCGAGACTTTAATCCCAACTGGATGAGTGCAGTGGAGATCTTGGATGATGACAATTTTCTGGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS CAA 72 bp CTGAGGATCCTGGTAGACAAAGCAAATGGTAGGTGCTaGACAACCATACAGGAACTTGACATCAATGACGTG +
Preference number: 6 (lower is better)
Translates to: LRILVDKANGRC*TTIQELDINDV
Trigger: CACGTCATTGATGTCAAGTTCCTGTATGGTTGTCAAGCACCTACCATTTGCTTTGTCTACCAGGATCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025649.10
CDS CAA 90 bp AAAGTCACCTTTAAGAGGCTGGTAGACAAAGCAAATGGTAGGTGCTaGACAACCATACAGGAACTTGACATCAATGACGTGCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: KVTFKRLVDKANGRC*TTIQELDINDVQFL
Trigger: GAGGAACTGCACGTCATTGATGTCAAGTTCCTGTATGGTTGTCAAGCACCTACCATTTGCTTTGTCTACCAGCCTCTTAAAGGTGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236280.2
CDS CAA 90 bp CCCAGAAAATTGTCATCATCCAAGATCTCCACTGCACTCATCCAGTaGGGATTAAAGTCTCGGGCAATCTCTTCAAAGTTTCCTTCCATA +
Preference number: 6 (lower is better)
Translates to: PRKLSSSKISTALIQ*GLKSRAISSKFPSI
Trigger: TATGGAAGGAAACTTTGAAGAGATTGCCCGAGACTTTAATCCCAACTGGATGAGTGCAGTGGAGATCTTGGATGATGACAATTTTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000237337.2
CDS GCA 72 bp ACCTTTAAGAGGCTGGTAGACAAAGCAAATGGTAGGTaGTTGACAACCATACAGGAACTTGACATCAATGAC +
Preference number: 6 (lower is better)
Translates to: TFKRLVDKANGR*LTTIQELDIND
Trigger: GTCATTGATGTCAAGTTCCTGTATGGTTGTCAAGCACCTACCATTTGCTTTGTCTACCAGCCTCTTAAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236280.2
CDS CAA 72 bp TTTAAGAGGCTGGTAGACAAAGCAAATGGTAGGTGCTaGACAACCATACAGGAACTTGACATCAATGACGTG +
Preference number: 6 (lower is better)
Translates to: FKRLVDKANGRC*TTIQELDINDV
Trigger: CACGTCATTGATGTCAAGTTCCTGTATGGTTGTCAAGCACCTACCATTTGCTTTGTCTACCAGCCTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236280.2
CDS TCA 72 bp AATTGCCAGGTATTTATCACCGTTATGATAGGTGATTaGTTCCTGTCCAATGATGATGGCACCTCCAAAAGG +
Preference number: 6 (lower is better)
Translates to: NCQVFITVMIGD*FLSNDDGTSKR
Trigger: CCTTTTGGAGGTGCCATCATCATTGGACAGGAATCAATCACCTATCATAACGGTGATAAATACCTGGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2
CDS GCA 72 bp TGGGCTCTTGTAATGATGTCAATGCTTTCGCCACTCTaGTTATACTCCAAGATACAGGCATTGTATTTAGCA +
Preference number: 6 (lower is better)
Translates to: WALVMMSMLSPL*LYSKIQALYLA
Trigger: TGCTAAATACAATGCCTGTATCTTGGAGTATAAGCAGAGTGGCGAAAGCATTGACATCATTACAAGAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025649.10
ENSMUST00000236280.2