Pregenerated sensors for DDAH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007039Ensembl transcript IDs: ENSMUST00000007255.13, ENSMUST00000173520.3, ENSMUST00000174493.8
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTATCCTGGGGCATCTCCCCACAACTACCCAGCCTCTATTAGCTaGTTCTACCCACTATACAGCTCTATTCCTAACCAGTGGGATCCC | + |
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Preference number: 1 (lower is better) Translates to: PYPGASPHNYPASIS*FYPLYSSIPNQWDP Trigger: GGGATCCCACTGGTTAGGAATAGAGCTGTATAGTGGGTAGAATCAGCTAATAGAGGCTGGGTAGTTGTGGGGAGATGCCCCAGGATAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| 3UTR-3UTR TCA 90 bp | TATACAGCTCTATTCCTAACCAGTGGGATCCCCAAATCCAGGCCCTCAGCAGTGAGCCTTCTCCAGTTCTaGGCAGGACACAGGTACCAG | + |
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Preference number: 2 (lower is better) Translates to: YTALFLTSGIPKSRPSAVSLLQF*AGHRYQ Trigger: CTGGTACCTGTGTCCTGCTCAGAACTGGAGAAGGCT...CACTGCTGAGGGCCTGGATTTGGGGATCCCACTGGTTAGGAATAGAGCTGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174493.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGAGTCCTTCCCTATCCTaGGGCATCTCCCCACAACTA | + |
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Preference number: 2 (lower is better) Translates to: RTHPMASILFHTKSFPILSPSLS*GISPQL Trigger: TAGTTGTGGGGAGATGCCCCAGGATAGGGAAGGACT...CAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGTCTATTCCTAACCAGTaGGATCCCCAAATCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RTHPMASILFHTKSFPILSIPNQ*DPQIQA Trigger: GGCCTGGATTTGGGGATCCCACTGGTTAGGAATAGA...CAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTTTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCTATTCCTAACCAGTaGGATCCCCAAATCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LVLTERTHPMASILFHTKSIPNQ*DPQIQA Trigger: GGCCTGGATTTGGGGATCCCACTGGTTAGGAATAGA...CTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAAAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | AATCCAGGCCCTCAGCAGTGGGGGCGTGTGCTGAGCACCAGGCAGAGGGAGCTGAGGGCCGTGTCTCCTTaGATCACAGCCGTGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: NPGPQQWGRVLSTRQRELRAVSP*ITAVSP Trigger: TGGTGACACGGCTGTGATCCAAGGAGACACGGCCCT...CAGCTCCCTCTGCCTGGTGCTCAGCACACGCCCCCACTGCTGAGGGCCTGGATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174493.8 |
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| CDS-3UTR TCA 90 bp | CCCAAATCCAGGCCCTCAGCAGTGGGGGCGTGTGCTGAGCACCAGGCAGAGGGAATCTCAGCTCCTCGATaGTTGGTCCACTTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKSRPSAVGACAEHQAEGISAPR*LVHLER Trigger: CCTCTCCAAGTGGACCAATCATCGAGGAGCTGAGAT...TCCCTCTGCCTGGTGCTCAGCACACGCCCCCACTGCTGAGGGCCTGGATTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174493.8 |
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| CDS-3UTR GCA 90 bp | CCCAAATCCAGGCCCTCAGCAGTGGGGGCGTGTGCTGAGCACCAGGCAGAGGGAGAGACAGTCACTAGCTaGATCATCTGGGAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKSRPSAVGACAEHQAEGETVTS*IIWEGQ Trigger: CTGACCCTCCCAGATGATGCAGCTAGTGACTGTCTC...TCCCTCTGCCTGGTGCTCAGCACACGCCCCCACTGCTGAGGGCCTGGATTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174493.8 |
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| CDS-3UTR GCA 90 bp | TCCACACTAAGTCCTTCCCTATCCTGGGGCATCTCCCCACAACTACCCAGCCTCTCCCCACCTCCGCGGTaGAGGAGGAAAGGTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: STLSPSLSWGISPQLPSLSPPPR*RRKGVA Trigger: TGCCACACCTTTCCTCCTGCACCGCGGAGGTGGGGA...GAGGCTGGGTAGTTGTGGGGAGATGCCCCAGGATAGGGAAGGACTTAGTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS-3UTR CCA 90 bp | CCTATCCTGGGGCATCTCCCCACAACTACCCAGCCTCTATTAGCTGATTCTACCGAGCCTCCTGGCTGTTaGGCAGGTCCCCACCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PILGHLPTTTQPLLADSTEPPGC*AGPHLR Trigger: GCGGAGGTGGGGACCTGCCCAACAGCCAGGAGGCTC...GGTAGAATCAGCTAATAGAGGCTGGGTAGTTGTGGGGAGATGCCCCAGGATAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS-3UTR TCA 90 bp | AAGTCCTTCCCTATCCTGGGGCATCTCCCCACAACTACCCAGCCTCTATTAGCTCCAGGCAGAGGGAGCTaGGGCCAGCTCCAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSFPILGHLPTTTQPLLAPGRGS*GQLQPS Trigger: AGAAGGCTGGAGCTGGCCTCAGCTCCCTCTGCCTGG...AGCTAATAGAGGCTGGGTAGTTGTGGGGAGATGCCCCAGGATAGGGAAGGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS-3UTR TCA 90 bp | TCCTTCCCTATCCTGGGGCATCTCCCCACAACTACCCAGCCTCTATTAGCTGATTGGTCCCAGCGGCAGTaGCTCCTCAGGAGGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFPILGHLPTTTQPLLADWSQRQ*LLRRQF Trigger: GAACTGCCTCCTGAGGAGTCACTGCCGCTGGGACCA...ATCAGCTAATAGAGGCTGGGTAGTTGTGGGGAGATGCCCCAGGATAGGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | CTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGGGGCCCCCGGATCAGGGCATaGGAACAACGACCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LTQWLLFFSTLSPSLSWGPRIRA*EQRPSP Trigger: GGGGCTGGGTCGTTGTTCCCATGCCCTGATCCGGGG...GCCCCAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR TCA 90 bp | TCCACACTAAGTCCTTCCCTATCCTGGGGCATCTCCCCACAACTACCCAGCCTCATCTCAGCTCCTCGATaGTTGGTCCACTTGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: STLSPSLSWGISPQLPSLISAPR*LVHLER Trigger: CCTCTCCAAGTGGACCAATCATCGAGGAGCTGAGAT...GAGGCTGGGTAGTTGTGGGGAGATGCCCCAGGATAGGGAAGGACTTAGTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR GCA 90 bp | TCCACACTAAGTCCTTCCCTATCCTGGGGCATCTCCCCACAACTACCCAGCCTCACATCAGAGAGCTTCTaGAGAGCCTCCTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: STLSPSLSWGISPQLPSLTSESF*RASWLL Trigger: CAACAGCCAGGAGGCTCTGCAGAAGCTCTCTGATGT...GAGGCTGGGTAGTTGTGGGGAGATGCCCCAGGATAGGGAAGGACTTAGTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS-3UTR CCA 90 bp | CACTATACAGCTCTATTCCTAACCAGTGGGATCCCCAAATCCAGGCCCTCAGCACTCAGGCCTACGTGCTaGGCTCCAGGGCCTTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HYTALFLTSGIPKSRPSALRPTC*APGPCD Trigger: ATCACAAGGCCCTGGAGCCCAGCACGTAGGCCTGAG...TGCTGAGGGCCTGGATTTGGGGATCCCACTGGTTAGGAATAGAGCTGTATAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174493.8 |
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| CDS-3UTR TCA 90 bp | GATTCTACCCACTATACAGCTCTATTCCTAACCAGTGGGATCCCCAAATCCAGGTGGTCCCAGCGGCAGTaGCTCCTCAGGAGGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSTHYTALFLTSGIPKSRWSQRQ*LLRRQF Trigger: GAACTGCCTCCTGAGGAGTCACTGCCGCTGGGACCA...CCTGGATTTGGGGATCCCACTGGTTAGGAATAGAGCTGTATAGTGGGTAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR GCA 90 bp | CACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGGGGCATGCAGAGCCTCCGCGGTaGAGGAGGAAAGGTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: HPMASILFHTKSFPILGHAEPPR*RRKGVA Trigger: TGCCACACCTTTCCTCCTGCACCGCGGAGGCTCTGC...ATGCCCCAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174493.8 |
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| CDS-3UTR GCA 90 bp | ACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGGGGGTCCCGGAACGTGTCTaGCACGATCTCAGCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: THPMASILFHTKSFPILGVPERV*HDLSSS Trigger: CGAGGAGCTGAGATCGTGGCAGACACGTTCCGGGAC...CCCCAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | GGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGGCTCAGGCCTACGTGCTaGGCTCCAGGGCCTTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLTQWLLFFSTLSPSLSWLRPTC*APGPCD Trigger: ATCACAAGGCCCTGGAGCCCAGCACGTAGGCCTGAG...CCAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | CCTATCCTGGGGCATCTCCCCACAACTACCCAGCCTCTATTAGCTGATTCTACCACTAGCTGCATCATCTaGGAGGGTCAGAGAGGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PILGHLPTTTQPLLADSTTSCII*EGQRGV Trigger: TACGCCTCTCTGACCCTCCCAGATGATGCAGCTAGT...GGTAGAATCAGCTAATAGAGGCTGGGTAGTTGTGGGGAGATGCCCCAGGATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR GCA 90 bp | CACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGGGGCATGGCAGTTCAAGCAGCTaGAGCCCTAGTCGTTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HPMASILFHTKSFPILGHGSSSS*SPSRCL Trigger: GAGGCAACGACTAGGGCTGCAGCTGCTTGAACTGCC...ATGCCCCAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR GCA 90 bp | GGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGGGGCAGTTCAAGCAGCTaGAGCCCTAGTCGTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLTQWLLFFSTLSPSLSWGSSSS*SPSRCL Trigger: GAGGCAACGACTAGGGCTGCAGCTGCTTGAACTGCC...CCAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | GGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGGAGGGCCGTGTCTCCTTaGATCACAGCCGTGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: GLTQWLLFFSTLSPSLSWRAVSP*ITAVSP Trigger: TGGTGACACGGCTGTGATCCAAGGAGACACGGCCCT...CCAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | CACTATACAGCTCTATTCCTAACCAGTGGGATCCCCAAATCCAGGCCCTCAGCACAGCTCCTCGATGATTaGTCCACTTGGAGAGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: HYTALFLTSGIPKSRPSAQLLDD*STWRGL Trigger: TAGGCCTCTCCAAGTGGACCAATCATCGAGGAGCTG...TGCTGAGGGCCTGGATTTGGGGATCCCACTGGTTAGGAATAGAGCTGTATAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | ACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGGGGGCCCTGACTGCTTTTTaGGCAGCCTCGCTGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: THPMASILFHTKSFPILGALTAF*AASLLP Trigger: TGGAAGCAGCGAGGCTGCCCAAAAAGCAGTCAGGGC...CCCCAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | TTCTACCCACTATACAGCTCTATTCCTAACCAGTGGGATCCCCAAATCCAGGCCACTAGCTGCATCATCTaGGAGGGTCAGAGAGGCGTA | + |
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Preference number: 4 (lower is better) Translates to: FYPLYSSIPNQWDPQIQATSCII*EGQRGV Trigger: TACGCCTCTCTGACCCTCCCAGATGATGCAGCTAGT...GGCCTGGATTTGGGGATCCCACTGGTTAGGAATAGAGCTGTATAGTGGGTAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | GTTTTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCGCAGGAGGAAAGGTGTaGCACCAGGCAACCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: VLTERTHPMASILFHTKSAGGKV*HQATQD Trigger: GTCCTGGGTTGCCTGGTGCCACACCTTTCCTCCTGC...GGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | TTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCTTCTGCAGAGCCTCCTaGCTGTTGGGCAGGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LTERTHPMASILFHTKSFFCRAS*LLGRSP Trigger: TGGGGACCTGCCCAACAGCCAGGAGGCTCTGCAGAA...GAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS-3UTR TCA 90 bp | AGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGAGCCTTCTCCAGTTCTaGGCAGGACACAGGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: RTHPMASILFHTKSFPILSLLQF*AGHRYQ Trigger: CTGGTACCTGTGTCCTGCTCAGAACTGGAGAAGGCT...CAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS-3UTR CCA 90 bp | CCTATCCTGGGGCATCTCCCCACAACTACCCAGCCTCTATTAGCTGATTCTACCGATGATTGGTCCACTTaGAGAGGCCTACGAAAAACT | + |
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Preference number: 4 (lower is better) Translates to: PILGHLPTTTQPLLADSTDDWST*RGLRKT Trigger: AGTTTTTCGTAGGCCTCTCCAAGTGGACCAATCATC...GGTAGAATCAGCTAATAGAGGCTGGGTAGTTGTGGGGAGATGCCCCAGGATAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | TTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCGCCCTGACTGCTTTTTaGGCAGCCTCGCTGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LTERTHPMASILFHTKSFALTAF*AASLLP Trigger: TGGAAGCAGCGAGGCTGCCCAAAAAGCAGTCAGGGC...GAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR TCA 90 bp | AGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGACACAGGTACCAGGGTaGCATCAGAGAGCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RTHPMASILFHTKSFPILTQVPG*HQRASA Trigger: TGCAGAAGCTCTCTGATGTCACCCTGGTACCTGTGT...CAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS-3UTR GCA 90 bp | ACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCCCTATCCTGGGGTGCAGCCCTAGTCGTTaGCTCAGTTTACCTCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: THPMASILFHTKSFPILGCSPSR*LSLPPS Trigger: ACTAGGAGGTAAACTGAGGCAACGACTAGGGCTGCA...CCCCAGGATAGGGAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR GCA 90 bp | TTGGTTTTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGGAGACAGTCACTAGCTaGATCATCTGGGAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LVLTERTHPMASILFHTKETVTS*IIWEGQ Trigger: CTGACCCTCCCAGATGATGCAGCTAGTGACTGTCTC...CTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | TTGGTTTTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGCAGCTCCTCGATGATTaGTCCACTTGGAGAGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: LVLTERTHPMASILFHTKQLLDD*STWRGL Trigger: TAGGCCTCTCCAAGTGGACCAATCATCGAGGAGCTG...CTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR GCA 90 bp | TTGGTTTTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTGCAGCCCTAGTCGTTaGCTCAGTTTACCTCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: LVLTERTHPMASILFHTKCSPSR*LSLPPS Trigger: ACTAGGAGGTAAACTGAGGCAACGACTAGGGCTGCA...CTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAAAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CCA 90 bp | TTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTTCGATGATTGGTCCACTTaGAGAGGCCTACGAAAAACT | + |
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Preference number: 4 (lower is better) Translates to: LTERTHPMASILFHTKSFDDWST*RGLRKT Trigger: AGTTTTTCGTAGGCCTCTCCAAGTGGACCAATCATC...GAAGGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS GCA 90 bp | TTCTGCAGAGCCTCCTGGCTGTTGGGCAGGTCCCCACCTCCGCGGTaGAGGAGGAAAGGTGTGGCACCAGGCAACCCAGGACGCAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: FCRASWLLGRSPPPR*RRKGVAPGNPGRRK Trigger: CTTTCTGCGTCCTGGGTTGCCTGGTGCCACACCTTTCCTCCTGCACCGCGGAGGTGGGGACCTGCCCAACAGCCAGGAGGCTCTGCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS TCA 90 bp | GCACTCCATCAACCTCAGGCCTACGTGCTGGGCTCCAGGGCCTTGTaGTTAGGGCCGTGTCTCCTTGGATCACAGCCGTGTCACCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: ALHQPQAYVLGSRAL*LGPCLLGSQPCHQA Trigger: TGCTTGGTGACACGGCTGTGATCCAAGGAGACACGGCCCTAATCACAAGGCCCTGGAGCCCAGCACGTAGGCCTGAGGTTGATGGAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007255.13 ENSMUST00000173520.3 ENSMUST00000174493.8 |
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| CDS TCA 90 bp | ACAGCGAAGTCCCGGAACGTGTCTGCCACGATCTCAGCTCCTCGATaGTTGGTCCACTTGGAGAGGCCTACGAAAAACTCCCGGCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: TAKSRNVSATISAPR*LVHLERPTKNSRPV Trigger: CACCGGCCGGGAGTTTTTCGTAGGCCTCTCCAAGTGGACCAATCATCGAGGAGCTGAGATCGTGGCAGACACGTTCCGGGACTTCGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS GCA 90 bp | AGTGGTCCCAGCGGCAGTGACTCCTCAGGAGGCAGTTCAAGCAGCTaGAGCCCTAGTCGTTGCCTCAGTTTACCTCCTAGTACTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: SGPSGSDSSGGSSSS*SPSRCLSLPPSTPC Trigger: GCATGGAGTACTAGGAGGTAAACTGAGGCAACGACTAGGGCTGCAGCTGCTTGAACTGCCTCCTGAGGAGTCACTGCCGCTGGGACCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007255.13 ENSMUST00000173520.3 ENSMUST00000174493.8 |
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| CDS GCA 90 bp | TGTGGCACCAGGCAACCCAGGACGCAGAAAGAGACAGTCACTAGCTaGATCATCTGGGAGGGTCAGAGAGGCGTAGGGGTGATCAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: CGTRQPRTQKETVTS*IIWEGQRGVGVISQ Trigger: CTGACTGATCACCCCTACGCCTCTCTGACCCTCCCAGATGATGCAGCTAGTGACTGTCTCTTTCTGCGTCCTGGGTTGCCTGGTGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS CCA 90 bp | GTCGCATTCTCATCCCCCATCTCCACAATTCGGAGTCCCAAGTCCTaGAGGGCTTTACGCACTCCATCAACCTCAGGCCTACGTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: VAFSSPISTIRSPKS*RALRTPSTSGLRAG Trigger: CCCAGCACGTAGGCCTGAGGTTGATGGAGTGCGTAAAGCCCTCCAGGACTTGGGACTCCGAATTGTGGAGATGGGGGATGAGAATGCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007255.13 ENSMUST00000173520.3 ENSMUST00000174493.8 |
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| CDS-3UTR CAA 90 bp | GATTCTACCCACTATACAGCTCTATTCCTAACCAGTGGGATCCCCAAATCCAGGAGAGCCTCCTGGCTGTaGGGCAGGTCCCCACCTCCG | + |
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Preference number: 5 (lower is better) Translates to: DSTHYTALFLTSGIPKSRRASWL*GRSPPP Trigger: CGGAGGTGGGGACCTGCCCAACAGCCAGGAGGCTCT...CCTGGATTTGGGGATCCCACTGGTTAGGAATAGAGCTGTATAGTGGGTAGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS-3UTR CAA 90 bp | GTTTTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTCCTACTCCATGCTCCCTTaGAGCTTTAGCCAGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: VLTERTHPMASILFHTKSYSMLP*SFSQVQ Trigger: CTGGACCTGGCTAAAGCTCAAAGGGAGCATGGAGTA...GGACTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS-3UTR CAA 90 bp | TTGGTTTTGACAGAGAGGACTCACCCAATGGCTTCTATTCTTTTCCACACTAAGTACTCCATGCTCCCTTaGAGCTTTAGCCAGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LVLTERTHPMASILFHTKYSMLP*SFSQVQ Trigger: CTGGACCTGGCTAAAGCTCAAAGGGAGCATGGAGTA...CTTAGTGTGGAAAAGAATAGAAGCCATTGGGTGAGTCCTCTCTGTCAAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS GCA 72 bp | GCCTCCTGGCTGTTGGGCAGGTCCCCACCTCCGCGGTaGAGGAGGAAAGGTGTGGCACCAGGCAACCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ASWLLGRSPPPR*RRKGVAPGNPG Trigger: TCCTGGGTTGCCTGGTGCCACACCTTTCCTCCTGCACCGCGGAGGTGGGGACCTGCCCAACAGCCAGGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS CAA 72 bp | GGCCGCGCAGGTGCGAGGAGCCTGAGACCGGTACCGTaGAGACAGCGAAGTCCCGGAACGTGTCTGCCACGA | + |
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Preference number: 6 (lower is better) Translates to: GRAGARSLRPVP*RQRSPGTCLPR Trigger: TCGTGGCAGACACGTTCCGGGACTTCGCTGTCTCAACGGTACCGGTCTCAGGCTCCTCGCACCTGCGCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS CCA 72 bp | GCAGGTCCCCACCTCCGCGGTGCAGGAGGAAAGGTGTaGCACCAGGCAACCCAGGACGCAGAAAGAGACAGT | + |
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Preference number: 6 (lower is better) Translates to: AGPHLRGAGGKV*HQATQDAERDS Trigger: ACTGTCTCTTTCTGCGTCCTGGGTTGCCTGGTGCCACACCTTTCCTCCTGCACCGCGGAGGTGGGGACCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007255.13 |
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| CDS CAA 72 bp | GTGATCAGTCAGCGCTGCCATTGCCCTGACTGCTTTTaGGGCAGCCTCGCTGCTTCCAGCCACCACGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: VISQRCHCPDCF*GSLAASSHHGA Trigger: CGCACCGTGGTGGCTGGAAGCAGCGAGGCTGCCCAAAAAGCAGTCAGGGCAATGGCAGCGCTGACTGATCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS TCA 72 bp | CAACCTCAGGCCTACGTGCTGGGCTCCAGGGCCTTGTaGTTAGGGCCGTGTCTCCTTGGATCACAGCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: QPQAYVLGSRAL*LGPCLLGSQPC Trigger: ACACGGCTGTGATCCAAGGAGACACGGCCCTAATCACAAGGCCCTGGAGCCCAGCACGTAGGCCTGAGGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007255.13 ENSMUST00000173520.3 ENSMUST00000174493.8 |
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| CDS GCA 72 bp | GAGGGTCAGAGAGGCGTAGGGGTGATCAGTCAGCGCTaGCATTGCCCTGACTGCTTTTTGGGCAGCCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: EGQRGVGVISQR*HCPDCFLGSLA Trigger: AGCGAGGCTGCCCAAAAAGCAGTCAGGGCAATGGCAGCGCTGACTGATCACCCCTACGCCTCTCTGACCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS CCA 72 bp | CTTCTGCAGAGCCTCCGCGGTGCAGGAGGAAAGGTGTaGCACCAGGCAACCCAGGACGCAGAAAGAGACAGT | + |
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Preference number: 6 (lower is better) Translates to: LLQSLRGAGGKV*HQATQDAERDS Trigger: ACTGTCTCTTTCTGCGTCCTGGGTTGCCTGGTGCCACACCTTTCCTCCTGCACCGCGGAGGCTCTGCAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174493.8 |
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| CDS GCA 72 bp | AGCGGCAGTGACTCCTCAGGAGGCAGTTCAAGCAGCTaGAGCCCTAGTCGTTGCCTCAGTTTACCTCCTAGT | + |
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Preference number: 6 (lower is better) Translates to: SGSDSSGGSSSS*SPSRCLSLPPS Trigger: ACTAGGAGGTAAACTGAGGCAACGACTAGGGCTGCAGCTGCTTGAACTGCCTCCTGAGGAGTCACTGCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007255.13 ENSMUST00000173520.3 ENSMUST00000174493.8 |
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| CDS CCA 72 bp | GGAACGTGTCTGCCACGATCTCAGCTCCTCGATGATTaGTCCACTTGGAGAGGCCTACGAAAAACTCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: GTCLPRSQLLDD*STWRGLRKTPG Trigger: GCCGGGAGTTTTTCGTAGGCCTCTCCAAGTGGACCAATCATCGAGGAGCTGAGATCGTGGCAGACACGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007255.13 ENSMUST00000173520.3 ENSMUST00000174493.8 |
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| CDS TCA 72 bp | TGCCTCAGTTTACCTCCTAGTACTCCATGCTCCCTTTaGGCTTTAGCCAGGTCCAGAGCCGGAAGACCAGCG | + |
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Preference number: 6 (lower is better) Translates to: CLSLPPSTPCSL*ALARSRAGRPA Trigger: CGCTGGTCTTCCGGCTCTGGACCTGGCTAAAGCTCAAAGGGAGCATGGAGTACTAGGAGGTAAACTGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007255.13 ENSMUST00000173520.3 ENSMUST00000174493.8 |
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| CDS TCA 72 bp | TCCCGGAACGTGTCTGCCACGATCTCAGCTCCTCGATaGTTGGTCCACTTGGAGAGGCCTACGAAAAACTCC | + |
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Preference number: 6 (lower is better) Translates to: SRNVSATISAPR*LVHLERPTKNS Trigger: GGAGTTTTTCGTAGGCCTCTCCAAGTGGACCAATCATCGAGGAGCTGAGATCGTGGCAGACACGTTCCGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS CCA 72 bp | AGGACGCAGAAAGAGACAGTCACTAGCTGCATCATCTaGGAGGGTCAGAGAGGCGTAGGGGTGATCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: RTQKETVTSCII*EGQRGVGVISQ Trigger: CTGACTGATCACCCCTACGCCTCTCTGACCCTCCCAGATGATGCAGCTAGTGACTGTCTCTTTCTGCGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007255.13 ENSMUST00000174493.8 |
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| CDS GCA 72 bp | TCAGGAGGCAGTTCAAGCAGCTGCAGCCCTAGTCGTTaGCTCAGTTTACCTCCTAGTACTCCATGCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SGGSSSSCSPSR*LSLPPSTPCSL Trigger: AAGGGAGCATGGAGTACTAGGAGGTAAACTGAGGCAACGACTAGGGCTGCAGCTGCTTGAACTGCCTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007255.13 ENSMUST00000173520.3 ENSMUST00000174493.8 |
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