Pregenerated sensors for DDA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074247Ensembl transcript IDs: ENSMUST00000124745.8, ENSMUST00000138892.2, ENSMUST00000147642.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGCCAGCTCTTTCCTGCCCTGGCACGGGCTCAGAGTGAGGCCTaGGCACAGGAGGACCCGGAGGACCTGCAATCCGGCCAGGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: RSQLFPALARAQSEA*AQEDPEDLQSGQAC Trigger: ACAGGCCTGGCCGGATTGCAGGTCCTCCGGGTCCTCCTGTGCCCAGGCCTCACTCTGAGCCCGTGCCAGGGCAGGAAAGAGCTGGCTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR TCA 90 bp | GATCCAGAGGAGCCAGCTCTTTCCTGCCCTGGCACGGGCTCAGAGTaGGGCCTGGGCACAGGAGGACCCGGAGGACCTGCAATCCGGCCA | + |
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Preference number: 1 (lower is better) Translates to: DPEEPALSCPGTGSE*GLGTGGPGGPAIRP Trigger: TGGCCGGATTGCAGGTCCTCCGGGTCCTCCTGTGCCCAGGCCTCACTCTGAGCCCGTGCCAGGGCAGGAAAGAGCTGGCTCCTCTGGATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR CCA 90 bp | GGCCTTCAGAGGCAGACACAGGGAGCAGCTCCAGGAACGGTACCGTaGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATAGGGCACGGC | + |
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Preference number: 1 (lower is better) Translates to: GLQRQTQGAAPGTVP*RILARASQGLIGHG Trigger: GCCGTGCCCTATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTTCCTGGAGCTGCTCCCTGTGTCTGCCTCTGAAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR CCA 90 bp | CCCTGGGCTCTAGACTCTGGCGAGGTCTCGCTGTGGGTGGCCGGGTaGGGGGCACCACTGTGCTTTAAAAAGCATGTACTGATACCTCGC | + |
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Preference number: 1 (lower is better) Translates to: PWALDSGEVSLWVAG*GAPLCFKKHVLIPR Trigger: GCGAGGTATCAGTACATGCTTTTTAAAGCACAGTGGTGCCCCCCACCCGGCCACCCACAGCGAGACCTCGCCAGAGTCTAGAGCCCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR TCA 90 bp | GTGGCCAGATGGATACCAGTGCTGGAGGTTGGCGGGCCTTGCACATaGTACCCAGTGGTGGGTGGCTGTTGGTTAGCCCCGTGGTACTAT | + |
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Preference number: 1 (lower is better) Translates to: VARWIPVLEVGGPCT*YPVVGGCWLAPWYY Trigger: ATAGTACCACGGGGCTAACCAACAGCCACCCACCACTGGGTATCATGTGCAAGGCCCGCCAACCTCCAGCACTGGTATCCATCTGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR CCA 90 bp | AATGATGTAAAAGAAAGATCCAGAGGAGCCAGCTCTTTCCTGCCCTaGCACGGGCTCAGAGTGAGGCCTGGGCACAGGAGGACCCGGAGG | + |
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Preference number: 1 (lower is better) Translates to: NDVKERSRGASSFLP*HGLRVRPGHRRTRR Trigger: CCTCCGGGTCCTCCTGTGCCCAGGCCTCACTCTGAGCCCGTGCCAGGGCAGGAAAGAGCTGGCTCCTCTGGATCTTTCTTTTACATCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR TCA 90 bp | AGGCCCAGGTCAGTAGGGCCACAGCCAAATAATAATGGCCCCCAGTaGACACAGACACCGTTAGCCTTCACAAGTATGCAGGGTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: RPRSVGPQPNNNGPQ*TQTPLAFTSMQGPQ Trigger: CTGAGGACCCTGCATACTTGTGAAGGCTAACGGTGTCTGTGTTCACTGGGGGCCATTATTATTTGGCTGTGGCCCTACTGACCTGGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR TCA 90 bp | AATTCAGACCAAGACCTGAGAGTGGGAGAAACTTCTGCCTGTATCTaGAAGGGGAGAGGCCTTCAGAGGCAGACACAGGGAGCAGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: NSDQDLRVGETSACI*KGRGLQRQTQGAAP Trigger: TGGAGCTGCTCCCTGTGTCTGCCTCTGAAGGCCTCTCCCCTTTCAGATACAGGCAGAAGTTTCTCCCACTCTCAGGTCTTGGTCTGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCAGGGCATCCCAGGGTTTAATAGGGCACGGCGGCAGTTGCCAAGTCACAGGCACGGGCTCAGAGTaGGGCCTGGGCACAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LARASQGLIGHGGSCQVTGTGSE*GLGTGG Trigger: TCCTCCTGTGCCCAGGCCTCACTCTGAGCCCGTGCC...TGTGACTTGGCAACTGCCGCCGTGCCCTATTAAACCCTGGGATGCCCTGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCACCGGGAGCAGCCTGCTGAGCCTAGACTCAGGTCATATGGCCCACCTGGCTCAGAGTGAGGCCTaGGCACAGGAGGACCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: FCTGSSLLSLDSGHMAHLAQSEA*AQEDPE Trigger: CTCCGGGTCCTCCTGTGCCCAGGCCTCACTCTGAGC...CAGGTGGGCCATATGACCTGAGTCTAGGCTCAGCAGGCTGCTCCCGGTGCAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGAGGCCTTCAGAGGCAGACACAGGGAGCAGCTCCAGGAACGGTACCGTGAGCTCTTTCCTGCCCTaGCACGGGCTCAGAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GERPSEADTGSSSRNGTVSSFLP*HGLRVR Trigger: CCTCACTCTGAGCCCGTGCCAGGGCAGGAAAGAGCT...CACGGTACCGTTCCTGGAGCTGCTCCCTGTGTCTGCCTCTGAAGGCCTCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | AACGGTACCGTGGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATAGGGCACGGCTGTGGGTGGCCGGGTaGGGGGCACCACTGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: NGTVEDSGQGIPGFNRARLWVAG*GAPLCF Trigger: AAAGCACAGTGGTGCCCCCCACCCGGCCACCCACAG...CCGTGCCCTATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | TATGGCCCACCTGCAGGAACCTGGGTGGTCCAGGTGACTCCCAAGAATGCACAGCTGTGGGTGGCCGGGTaGGGGGCACCACTGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: YGPPAGTWVVQVTPKNAQLWVAG*GAPLCF Trigger: AAAGCACAGTGGTGCCCCCCACCCGGCCACCCACAG...CTGTGCATTCTTGGGAGTCACCTGGACCACCCAGGTTCCTGCAGGTGGGCCATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACGGTACCGTGGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATAGGGCACGCTCAGAGTGAGGCCTaGGCACAGGAGGACCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: GTVPWRILARASQGLIGHAQSEA*AQEDPE Trigger: CTCCGGGTCCTCCTGTGCCCAGGCCTCACTCTGAGC...GTGCCCTATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTCATAGGGGTGCCCAGGACAGAGGTTCTGCACCGGGAGCAGCCTGCTACCCCAGGCAGGGGTTaGTTCCTACAGGTCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: GSLIGVPRTEVLHREQPATPGRG*FLQVPV Trigger: CACTGGGACCTGTAGGAACCAACCCCTGCCTGGGGT...AGCAGGCTGCTCCCGGTGCAGAACCTCTGTCCTGGGCACCCCTATGAGTGAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTCATAGGGGTGCCCAGGACAGAGGTTCTGCACCGGGAGCAGCCTGCTGCTTACACACGCGGGTaGGAGTGGACAGAGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: GSLIGVPRTEVLHREQPAAYTRG*EWTELT Trigger: TGTCAGCTCTGTCCACTCCCACCCGCGTGTGTAAGC...AGCAGGCTGCTCCCGGTGCAGAACCTCTGTCCTGGGCACCCCTATGAGTGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTGCCAAGTCACAGCATGAGGCTGAGATGCTACTAGGGCCATACCAGGCCGCTCAGAGTGAGGCCTaGGCACAGGAGGACCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: AVAKSQHEAEMLLGPYQAAQSEA*AQEDPE Trigger: CTCCGGGTCCTCCTGTGCCCAGGCCTCACTCTGAGC...GGCCTGGTATGGCCCTAGTAGCATCTCAGCCTCATGCTGTGACTTGGCAACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTCATAGGGGTGCCCAGGACAGAGGTTCTGCACCGGGAGCAGCCTGCTTACCGTGGAGGATTCTaGCCAGGGCATCCCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: GSLIGVPRTEVLHREQPAYRGGF*PGHPRV Trigger: AACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTA...AGCAGGCTGCTCCCGGTGCAGAACCTCTGTCCTGGGCACCCCTATGAGTGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGTCCTCTCTGGTCTGGGTCCAGATACACATGGCACTCCACACCTCAGCCCCACCTGCAGGAACCTaGGTGGTCCAGGTGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: SRSSLVWVQIHMALHTSAPPAGT*VVQVTP Trigger: GGGAGTCACCTGGACCACCCAGGTTCCTGCAGGTGG...GGCTGAGGTGTGGAGTGCCATGTGTATCTGGACCCAGACCAGAGAGGACCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR TCA 90 bp | CCGTTAGCCTTCACAAGTATGCAGGGTCCTCAGAACCCCATCCTTGCAGTGAGTGGCACGGGCTCAGAGTaGGGCCTGGGCACAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: PLAFTSMQGPQNPILAVSGTGSE*GLGTGG Trigger: TCCTCCTGTGCCCAGGCCTCACTCTGAGCCCGTGCC...ACTCACTGCAAGGATGGGGTTCTGAGGACCCTGCATACTTGTGAAGGCTAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGTTCTGCACCGGGAGCAGCCTGCTGAGCCTAGACTCAGGTCATATGGCCGCTCCGGCCAAAGTTTaGGGAGCAAAGACGCCGTGT | + |
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Preference number: 2 (lower is better) Translates to: QRFCTGSSLLSLDSGHMAAPAKV*GAKTPC Trigger: ACACGGCGTCTTTGCTCCGCAAACTTTGGCCGGAGC...GGCCATATGACCTGAGTCTAGGCTCAGCAGGCTGCTCCCGGTGCAGAACCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGTTCTGCACCGGGAGCAGCCTGCTGAGCCTAGACTCAGGTCATATGGCAGCTCTTTCCTGCCCTaGCACGGGCTCAGAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: TEVLHREQPAEPRLRSYGSSFLP*HGLRVR Trigger: CCTCACTCTGAGCCCGTGCCAGGGCAGGAAAGAGCT...GCCATATGACCTGAGTCTAGGCTCAGCAGGCTGCTCCCGGTGCAGAACCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCACTCATAGGGGTGCCCAGGACAGAGGTTCTGCACCGGGAGCAGCCTGCTACCAGTGCTGGAGGTTaGCGGGCCTTGCACATGATA | + |
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Preference number: 2 (lower is better) Translates to: GSLIGVPRTEVLHREQPATSAGG*RALHMI Trigger: TATCATGTGCAAGGCCCGCCAACCTCCAGCACTGGT...AGCAGGCTGCTCCCGGTGCAGAACCTCTGTCCTGGGCACCCCTATGAGTGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR TCA 90 bp | TATGGCCCACCTGCAGGAACCTGGGTGGTCCAGGTGACTCCCAAGAATGCACAGGGGAGTGGACAGAGCTaGCAGATGAGGGGAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: YGPPAGTWVVQVTPKNAQGSGQS*QMRGDA Trigger: TGCATCTCCCCTCATCTGTCAGCTCTGTCCACTCCC...CTGTGCATTCTTGGGAGTCACCTGGACCACCCAGGTTCCTGCAGGTGGGCCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 |
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| 3UTR-3UTR TCA 90 bp | AGACACAGGGAGCAGCTCCAGGAACGGTACCGTGGAGGATTCTGGCCAGGGCATGTACCATGCTACAGCTaGGGGTGCACAGCCACTCTA | + |
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Preference number: 2 (lower is better) Translates to: RHREQLQERYRGGFWPGHVPCYS*GCTATL Trigger: TAGAGTGGCTGTGCACCCTCAGCTGTAGCATGGTAC...ATGCCCTGGCCAGAATCCTCCACGGTACCGTTCCTGGAGCTGCTCCCTGTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACGGTACCGTGGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATAGGGCACGCTTACACACGCGGGTaGGAGTGGACAGAGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: GTVPWRILARASQGLIGHAYTRG*EWTELT Trigger: TGTCAGCTCTGTCCACTCCCACCCGCGTGTGTAAGC...GTGCCCTATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 |
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| 3UTR-3UTR CCA 90 bp | AGACACAGGGAGCAGCTCCAGGAACGGTACCGTGGAGGATTCTGGCCAGGGCATACCAGTGCTGGAGGTTaGCGGGCCTTGCACATGATA | + |
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Preference number: 2 (lower is better) Translates to: RHREQLQERYRGGFWPGHTSAGG*RALHMI Trigger: TATCATGTGCAAGGCCCGCCAACCTCCAGCACTGGT...ATGCCCTGGCCAGAATCCTCCACGGTACCGTTCCTGGAGCTGCTCCCTGTGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGTTCTGCACCGGGAGCAGCCTGCTGAGCCTAGACTCAGGTCATATGGCTACCGTGGAGGATTCTaGCCAGGGCATCCCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: TEVLHREQPAEPRLRSYGYRGGF*PGHPRV Trigger: AACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTA...GCCATATGACCTGAGTCTAGGCTCAGCAGGCTGCTCCCGGTGCAGAACCTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | TATGGCCCACCTGCAGGAACCTGGGTGGTCCAGGTGACTCCCAAGAATGCACAGTACCGTGGAGGATTCTaGCCAGGGCATCCCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: YGPPAGTWVVQVTPKNAQYRGGF*PGHPRV Trigger: AACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTA...CTGTGCATTCTTGGGAGTCACCTGGACCACCCAGGTTCCTGCAGGTGGGCCATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTGAGTACCATGCTACAGCTGAGGGTGCACAGCCACTCTACCAGTCCAGGGCTCCGGCCAAAGTTTaGGGAGCAAAGACGCCGTGT | + |
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Preference number: 2 (lower is better) Translates to: CSEYHATAEGAQPLYQSRAPAKV*GAKTPC Trigger: ACACGGCGTCTTTGCTCCGCAAACTTTGGCCGGAGC...CCTGGACTGGTAGAGTGGCTGTGCACCCTCAGCTGTAGCATGGTACTCACTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCAGGAACCTGGGTGGTCCAGGTGACTCCCAAGAATGCACAGTAGTAGCAATCCGGCCAGGCCTGTaGGTAGGAAGGAGCGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: TCRNLGGPGDSQECTVVAIRPGL*VGRSER Trigger: CCTTTCGCTCCTTCCTACCCACAGGCCTGGCCGGAT...TGCTACTACTGTGCATTCTTGGGAGTCACCTGGACCACCCAGGTTCCTGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACGGTACCGTGGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATAGGGCACACCAGTGCTGGAGGTTaGCGGGCCTTGCACATGATA | + |
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Preference number: 2 (lower is better) Translates to: GTVPWRILARASQGLIGHTSAGG*RALHMI Trigger: TATCATGTGCAAGGCCCGCCAACCTCCAGCACTGGT...GTGCCCTATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR TCA 90 bp | AACGGTACCGTGGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATAGGGCACGGAATAATGGCCCCCAGTaGACACAGACACCGTTAGCC | + |
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Preference number: 2 (lower is better) Translates to: NGTVEDSGQGIPGFNRARNNGPQ*TQTPLA Trigger: GGCTAACGGTGTCTGTGTTCACTGGGGGCCATTATT...CCGTGCCCTATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTTAGCCTTCACAAGTATGCAGGGTCCTCAGAACCCCATCCTTGCAGTGAGTAGCTCTTTCCTGCCCTaGCACGGGCTCAGAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PLAFTSMQGPQNPILAVSSSFLP*HGLRVR Trigger: CCTCACTCTGAGCCCGTGCCAGGGCAGGAAAGAGCT...ACTCACTGCAAGGATGGGGTTCTGAGGACCCTGCATACTTGTGAAGGCTAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTTAGCCTTCACAAGTATGCAGGGTCCTCAGAACCCCATCCTTGCAGTGAGTACCCCAGGCAGGGGTTaGTTCCTACAGGTCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PLAFTSMQGPQNPILAVSTPGRG*FLQVPV Trigger: CACTGGGACCTGTAGGAACCAACCCCTGCCTGGGGT...ACTCACTGCAAGGATGGGGTTCTGAGGACCCTGCATACTTGTGAAGGCTAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR CAA 90 bp | AGGCAGGGGTTGGTTCCTACAGGTCCCAGTGGCTCCGGCCAAAGTTaGCGGAGCAAAGACGCCGTGTGGAGTAGGAAAGGTCCTTTTATT | + |
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Preference number: 2 (lower is better) Translates to: RQGLVPTGPSGSGQS*RSKDAVWSRKGPFI Trigger: AATAAAAGGACCTTTCCTACTCCACACGGCGTCTTTGCTCCGCAAACTTTGGCCGGAGCCACTGGGACCTGTAGGAACCAACCCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR TCA 90 bp | AGTATGCAGGGTCCTCAGAACCCCATCCTTGCAGTGAGTACCATGCTACAGCTGGGGAGTGGACAGAGCTaGCAGATGAGGGGAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: SMQGPQNPILAVSTMLQLGSGQS*QMRGDA Trigger: TGCATCTCCCCTCATCTGTCAGCTCTGTCCACTCCC...CAGCTGTAGCATGGTACTCACTGCAAGGATGGGGTTCTGAGGACCCTGCATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCACAGCAAAAGGCAATCATAGGAAGGCAGTTGGAATTCAGACCAAGACCTGGCACGGGCTCAGAGTaGGGCCTGGGCACAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VAQQKAIIGRQLEFRPRPGTGSE*GLGTGG Trigger: TCCTCCTGTGCCCAGGCCTCACTCTGAGCCCGTGCC...AGGTCTTGGTCTGAATTCCAACTGCCTTCCTATGATTGCCTTTTGCTGTGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR GCA 90 bp | GGAACGGTACCGTGGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATAGGGCACTCAGAACCCCATCCTTaGAGTGAGTACCATGCTACA | + |
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Preference number: 2 (lower is better) Translates to: GTVPWRILARASQGLIGHSEPHP*SEYHAT Trigger: TGTAGCATGGTACTCACTGCAAGGATGGGGTTCTGA...GTGCCCTATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR GCA 90 bp | TATGGCCCACCTGCAGGAACCTGGGTGGTCCAGGTGACTCCCAAGAATGCACAGAGTGGGAGAAACTTCTaGCTGTATCTGAAAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: YGPPAGTWVVQVTPKNAQSGRNF*LYLKGE Trigger: CTCCCCTTTCAGATACAGGCAGAAGTTTCTCCCACT...CTGTGCATTCTTGGGAGTCACCTGGACCACCCAGGTTCCTGCAGGTGGGCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGTCCTCTCTGGTCTGGGTCCAGATACACATGGCACTCCACACCTCAGCCAGTGGGAGAAACTTCTaGCTGTATCTGAAAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SRSSLVWVQIHMALHTSASGRNF*LYLKGE Trigger: CTCCCCTTTCAGATACAGGCAGAAGTTTCTCCCACT...GGCTGAGGTGTGGAGTGCCATGTGTATCTGGACCCAGACCAGAGAGGACCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCACCGGGAGCAGCCTGCTGAGCCTAGACTCAGGTCATATGGCCCACCTGAGGAAAATAAATACATaGATCCTATGCGGTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FCTGSSLLSLDSGHMAHLRKINT*ILCGWR Trigger: CCTCCAACCGCATAGGATCCATGTATTTATTTTCCT...CAGGTGGGCCATATGACCTGAGTCTAGGCTCAGCAGGCTGCTCCCGGTGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATGATGTAAAAGAAAGATCCAGAGGAGCCAGCTCTTTCCTGCCCTGGCACATCCGGCCAGGCCTGTaGGTAGGAAGGAGCGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: INDVKERSRGASSFLPWHIRPGL*VGRSER Trigger: CCTTTCGCTCCTTCCTACCCACAGGCCTGGCCGGAT...GTGCCAGGGCAGGAAAGAGCTGGCTCCTCTGGATCTTTCTTTTACATCATTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGGCCCACCTGCAGGAACCTGGGTGGTCCAGGTGACTCCCAAGAATGCACAGAGGAAAATAAATACATaGATCCTATGCGGTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: YGPPAGTWVVQVTPKNAQRKINT*ILCGWR Trigger: CCTCCAACCGCATAGGATCCATGTATTTATTTTCCT...CTGTGCATTCTTGGGAGTCACCTGGACCACCCAGGTTCCTGCAGGTGGGCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCAATAAAATGTCTATTTCAACAGTGCTCGAGGTCAGAGCAGTGAAGGGGCCTAATAATGGCCCCCAGTaGACACAGACACCGTTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: CNKMSISTVLEVRAVKGPNNGPQ*TQTPLA Trigger: GGCTAACGGTGTCTGTGTTCACTGGGGGCCATTATT...AGGCCCCTTCACTGCTCTGACCTCGAGCACTGTTGAAATAGACATTTTATTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATGCAATAAAATGTCTATTTCAACAGTGCTCGAGGTCAGAGCAGTGAAGGGGGCTCCGGCCAAAGTTTaGGGAGCAAAGACGCCGTGT | + |
|
Preference number: 2 (lower is better) Translates to: KCNKMSISTVLEVRAVKGAPAKV*GAKTPC Trigger: ACACGGCGTCTTTGCTCCGCAAACTTTGGCCGGAGC...CCCCTTCACTGCTCTGACCTCGAGCACTGTTGAAATAGACATTTTATTGCATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAGCACAGCAAAAGGCAATCATAGGAAGGCAGTTGGAATTCAGACCAAGACCTTGTTGGTTAGCCCCGTaGTACTATCCTGGGCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VAQQKAIIGRQLEFRPRPCWLAP*YYPGLS Trigger: ACTGAGCCCAGGATAGTACCACGGGGCTAACCAACA...AGGTCTTGGTCTGAATTCCAACTGCCTTCCTATGATTGCCTTTTGCTGTGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATGCAATAAAATGTCTATTTCAACAGTGCTCGAGGTCAGAGCAGTGAAGGGGGTACCATGCTACAGCTaGGGGTGCACAGCCACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: KCNKMSISTVLEVRAVKGVPCYS*GCTATL Trigger: TAGAGTGGCTGTGCACCCTCAGCTGTAGCATGGTAC...CCCCTTCACTGCTCTGACCTCGAGCACTGTTGAAATAGACATTTTATTGCATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAATGCAATAAAATGTCTATTTCAACAGTGCTCGAGGTCAGAGCAGTGAAGCCTGGGTGGTCCAGGTaGCTCCCAAGAATGCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: QKCNKMSISTVLEVRAVKPGWSR*LPRMHS Trigger: ACTGTGCATTCTTGGGAGTCACCTGGACCACCCAGG...CTTCACTGCTCTGACCTCGAGCACTGTTGAAATAGACATTTTATTGCATTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATGCAATAAAATGTCTATTTCAACAGTGCTCGAGGTCAGAGCAGTGAAGGGGGGGTCCAGATACACATaGCACTCCACACCTCAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: KCNKMSISTVLEVRAVKGGSRYT*HSTPQP Trigger: TGGCTGAGGTGTGGAGTGCCATGTGTATCTGGACCC...CCCCTTCACTGCTCTGACCTCGAGCACTGTTGAAATAGACATTTTATTGCATTT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCAATAAAATGTCTATTTCAACAGTGCTCGAGGTCAGAGCAGTGAAGGGGCCTTCAGAACCCCATCCTTaGAGTGAGTACCATGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: CNKMSISTVLEVRAVKGPSEPHP*SEYHAT Trigger: TGTAGCATGGTACTCACTGCAAGGATGGGGTTCTGA...AGGCCCCTTCACTGCTCTGACCTCGAGCACTGTTGAAATAGACATTTTATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAATGCAATAAAATGTCTATTTCAACAGTGCTCGAGGTCAGAGCAGTGAAGGGTCCAGGTCCTCTCTaGTCTGGGTCCAGATACACA | + |
|
Preference number: 2 (lower is better) Translates to: QKCNKMSISTVLEVRAVKGPGPL*SGSRYT Trigger: TGTGTATCTGGACCCAGACCAGAGAGGACCTGGACC...CTTCACTGCTCTGACCTCGAGCACTGTTGAAATAGACATTTTATTGCATTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCAATAAAATGTCTATTTCAACAGTGCTCGAGGTCAGAGCAGTGAAGGGGCCTAGGAAAATAAATACATaGATCCTATGCGGTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CNKMSISTVLEVRAVKGPRKINT*ILCGWR Trigger: CCTCCAACCGCATAGGATCCATGTATTTATTTTCCT...AGGCCCCTTCACTGCTCTGACCTCGAGCACTGTTGAAATAGACATTTTATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR CCA 72 bp | GGAGGACCCGGAGGACCTGCAATCCGGCCAGGCCTGTaGGTAGGAAGGAGCGAAAGGCCGCTCGGTGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GGPGGPAIRPGL*VGRSERPLGVL Trigger: CAACACACCGAGCGGCCTTTCGCTCCTTCCTACCCACAGGCCTGGCCGGATTGCAGGTCCTCCGGGTCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR TCA 72 bp | TGGATACCAGTGCTGGAGGTTGGCGGGCCTTGCACATaGTACCCAGTGGTGGGTGGCTGTTGGTTAGCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: WIPVLEVGGPCT*YPVVGGCWLAP Trigger: CGGGGCTAACCAACAGCCACCCACCACTGGGTATCATGTGCAAGGCCCGCCAACCTCCAGCACTGGTATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAACGGTACCGTGGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATAGGGCACGGAGGTTGGCGGGCCTaGCACATGATACCCAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GTVPWRILARASQGLIGHGGWRA*HMIPSG Trigger: ACCACTGGGTATCATGTGCAAGGCCCGCCAACCTCC...GTGCCCTATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR CCA 72 bp | CTAGACTCTGGCGAGGTCTCGCTGTGGGTGGCCGGGTaGGGGGCACCACTGTGCTTTAAAAAGCATGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LDSGEVSLWVAG*GAPLCFKKHVL Trigger: CAGTACATGCTTTTTAAAGCACAGTGGTGCCCCCCACCCGGCCACCCACAGCGAGACCTCGCCAGAGTCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGTCCTCTCTGGTCTGGGTCCAGATACACATGGCACTCCACACCTCAGCCTACCAGTGCTGGAGGTaGGCGGGCCTTGCACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: SRSSLVWVQIHMALHTSAYQCWR*AGLAHD Trigger: ATCATGTGCAAGGCCCGCCAACCTCCAGCACTGGTA...GGCTGAGGTGTGGAGTGCCATGTGTATCTGGACCCAGACCAGAGAGGACCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGCAGGAACCTGGGTGGTCCAGGTGACTCCCAAGAATGCACAGTAGTAGCAGGAGGTTGGCGGGCCTaGCACATGATACCCAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TCRNLGGPGDSQECTVVAGGWRA*HMIPSG Trigger: ACCACTGGGTATCATGTGCAAGGCCCGCCAACCTCC...TGCTACTACTGTGCATTCTTGGGAGTCACCTGGACCACCCAGGTTCCTGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR GCA 72 bp | TGGTTCCTACAGGTCCCAGTGGCTCCGGCCAAAGTTTaGGGAGCAAAGACGCCGTGTGGAGTAGGAAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: WFLQVPVAPAKV*GAKTPCGVGKV Trigger: GACCTTTCCTACTCCACACGGCGTCTTTGCTCCGCAAACTTTGGCCGGAGCCACTGGGACCTGTAGGAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR CCA 72 bp | AGGCAGACACAGGGAGCAGCTCCAGGAACGGTACCGTaGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: RQTQGAAPGTVP*RILARASQGLI Trigger: TATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTTCCTGGAGCTGCTCCCTGTGTCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTATGCAGGGTCCTCAGAACCCCATCCTTGCAGTGAGTACCATGCTACAGCTGGGAGGTTGGCGGGCCTaGCACATGATACCCAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SMQGPQNPILAVSTMLQLGGWRA*HMIPSG Trigger: ACCACTGGGTATCATGTGCAAGGCCCGCCAACCTCC...CAGCTGTAGCATGGTACTCACTGCAAGGATGGGGTTCTGAGGACCCTGCATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR TCA 72 bp | CCAGATACACATGGCACTCCACACCTCAGCCAGATGTaGCATGGTTCACTCATAGGGGTGCCCAGGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PDTHGTPHLSQM*HGSLIGVPRTE Trigger: CTCTGTCCTGGGCACCCCTATGAGTGAACCATGTCACATCTGGCTGAGGTGTGGAGTGCCATGTGTATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR TCA 72 bp | CATATGGCCCACCTGCAGGAACCTGGGTGGTCCAGGTaGCTCCCAAGAATGCACAGTAGTAGCACAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HMAHLQEPGWSR*LPRMHSSSTAK Trigger: TTTTGCTGTGCTACTACTGTGCATTCTTGGGAGTCACCTGGACCACCCAGGTTCCTGCAGGTGGGCCATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR GCA 72 bp | TGCAGGAACCTGGGTGGTCCAGGTGACTCCCAAGAATaGACAGTAGTAGCACAGCAAAAGGCAATCATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CRNLGGPGDSQE*TVVAQQKAIIG Trigger: TCCTATGATTGCCTTTTGCTGTGCTACTACTGTGCATTCTTGGGAGTCACCTGGACCACCCAGGTTCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| 3UTR TCA 72 bp | TCAGTAGGGCCACAGCCAAATAATAATGGCCCCCAGTaGACACAGACACCGTTAGCCTTCACAAGTATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVGPQPNNNGPQ*TQTPLAFTSMQ Trigger: CTGCATACTTGTGAAGGCTAACGGTGTCTGTGTTCACTGGGGGCCATTATTATTTGGCTGTGGCCCTACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAATGCAATAAAATGTCTATTTCAACAGTGCTCGAGGTCAGAGCAGTGAAGAGTGGTGGGTGGCTGTaGGTTAGCCCCGTGGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: QKCNKMSISTVLEVRAVKSGGWL*VSPVVL Trigger: TAGTACCACGGGGCTAACCAACAGCCACCCACCACT...CTTCACTGCTCTGACCTCGAGCACTGTTGAAATAGACATTTTATTGCATTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| CDS-3UTR GCA 90 bp | CTGGGCACAGGAGGACCCGGAGGACCTGCAATCCGGCCAGGCCTGTGGGTAGGACGGTCCGGGCCACCTTaGGAGGTGGCGCTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTGGPGGPAIRPGLWVGRSGPP*EVALSS Trigger: AGAGCTCAGCGCCACCTCGCAAGGTGGCCCGGACCG...TCCTACCCACAGGCCTGGCCGGATTGCAGGTCCTCCGGGTCCTCCTGTGCCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGTTCTGCACCGGGAGCAGCCTGCTGAGCCTAGACTCAGGTCATATGGCCCGGTCCGGGCCACCTTaGGAGGTGGCGCTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRFCTGSSLLSLDSGHMARSGPP*EVALSS Trigger: AGAGCTCAGCGCCACCTCGCAAGGTGGCCCGGACCG...GGCCATATGACCTGAGTCTAGGCTCAGCAGGCTGCTCCCGGTGCAGAACCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| CDS-3UTR TCA 90 bp | AGACACAGGGAGCAGCTCCAGGAACGGTACCGTGGAGGATTCTGGCCAGGGCATGGGAGTGGACAGAGCTaGCAGATGAGGGGAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHREQLQERYRGGFWPGHGSGQS*QMRGDA Trigger: TGCATCTCCCCTCATCTGTCAGCTCTGTCCACTCCC...ATGCCCTGGCCAGAATCCTCCACGGTACCGTTCCTGGAGCTGCTCCCTGTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147642.2 |
||
| 3UTR CAA 72 bp | GTTCTCGAGTGGCCAGATGGATACCAGTGCTGGAGGTaGGCGGGCCTTGCACATGATACCCAGTGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLEWPDGYQCWR*AGLAHDTQWWV Trigger: CACCCACCACTGGGTATCATGTGCAAGGCCCGCCAACCTCCAGCACTGGTATCCATCTGGCCACTCGAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| CDS-3UTR GCA 90 bp | ACAGAGGTTCTGCACCGGGAGCAGCCTGCTGAGCCTAGACTCAGGTCATATGGCCCCTCCGCCTCCACCTaGTCTTGGTCTCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLHREQPAEPRLRSYGPSAST*SWSLFL Trigger: CAAGAAGAGAGACCAAGAGCAGGTGGAGGCGGAGGG...GCCATATGACCTGAGTCTAGGCTCAGCAGGCTGCTCCCGGTGCAGAACCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| CDS-3UTR GCA 90 bp | AACGGTACCGTGGAGGATTCTGGCCAGGGCATCCCAGGGTTTAATAGGGCACGGCCCTCCGCCTCCACCTaGTCTTGGTCTCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGTVEDSGQGIPGFNRARPSAST*SWSLFL Trigger: CAAGAAGAGAGACCAAGAGCAGGTGGAGGCGGAGGG...CCGTGCCCTATTAAACCCTGGGATGCCCTGGCCAGAATCCTCCACGGTACCGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| CDS-3UTR TCA 90 bp | CCGTTAGCCTTCACAAGTATGCAGGGTCCTCAGAACCCCATCCTTGCAGTGAGTCACAATGATCTGTTCTaGCGGGTACTCTCGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLAFTSMQGPQNPILAVSHNDLF*RVLSGR Trigger: CCGACCCGAGAGTACCCGTCAGAACAGATCATTGTG...ACTCACTGCAAGGATGGGGTTCTGAGGACCCTGCATACTTGTGAAGGCTAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124745.8 |
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| CDS-3UTR GCA 90 bp | TGCTTTAAAAAGCATGTACTGATACCTCGCGGCTGGGCCTGGTGTCCCTTTAACCCCTCCGCCTCCACCTaGTCTTGGTCTCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CFKKHVLIPRGWAWCPFNPSAST*SWSLFL Trigger: CAAGAAGAGAGACCAAGAGCAGGTGGAGGCGGAGGG...GTTAAAGGGACACCAGGCCCAGCCGCGAGGTATCAGTACATGCTTTTTAAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
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| CDS-3UTR GCA 90 bp | CAGCAAAAGGCAATCATAGGAAGGCAGTTGGAATTCAGACCAAGACCTGAGAGTACAGATGAGGGGAGATaGACAGGACCTAGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQKAIIGRQLEFRPRPESTDEGR*TGPRCP Trigger: AGGACACCTAGGTCCTGTGCATCTCCCCTCATCTGT...ACTCTCAGGTCTTGGTCTGAATTCCAACTGCCTTCCTATGATTGCCTTTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147642.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTTTGCGGAGCAAAGACGCCGTGTGGAGTAGGAAAGGTCCTTTTATTGGGGCTTGGTCTCTCTTCTTaGCAGCATTCTTTTTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVCGAKTPCGVGKVLLLGLGLSS*QHSFYP Trigger: GGGATAAAAAGAATGCTGCCAAGAAGAGAGACCAAG...CCCCAATAAAAGGACCTTTCCTACTCCACACGGCGTCTTTGCTCCGCAAACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000124745.8 |
||
| 3UTR CAA 72 bp | GTAGTAGCACAGCAAAAGGCAATCATAGGAAGGCAGTaGGAATTCAGACCAAGACCTGAGAGTGGGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVAQQKAIIGRQ*EFRPRPESGRN Trigger: GTTTCTCCCACTCTCAGGTCTTGGTCTGAATTCCAACTGCCTTCCTATGATTGCCTTTTGCTGTGCTACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| CDS TCA 90 bp | CGGCATGTCGGGGCTGTCGGTCCGGGCCACCTTGCGAGGTGGCGCTaGGCTCTCGCCCTCCGCCTCCACCTGCTCTTGGTCTCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RHVGAVGPGHLARWR*ALALRLHLLLVSLL Trigger: AAGAAGAGAGACCAAGAGCAGGTGGAGGCGGAGGGCGAGAGCTCAGCGCCACCTCGCAAGGTGGCCCGGACCGACAGCCCCGACATGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| CDS-3UTR CAA 90 bp | GGTTCACTCATAGGGGTGCCCAGGACAGAGGTTCTGCACCGGGAGCAGCCTGCTCGGCGGTTCGAGGCCTaGCACACAGAGTCCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLIGVPRTEVLHREQPARRFEA*HTESAW Trigger: CCACGCGGACTCTGTGTGCAAGGCCTCGAACCGCCG...AGCAGGCTGCTCCCGGTGCAGAACCTCTGTCCTGGGCACCCCTATGAGTGAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124745.8 ENSMUST00000147642.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGTCCTCTCTGGTCTGGGTCCAGATACACATGGCACTCCACACCTCAGCCCGGCGGTTCGAGGCCTaGCACACAGAGTCCGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSLVWVQIHMALHTSARRFEA*HTESAW Trigger: CCACGCGGACTCTGTGTGCAAGGCCTCGAACCGCCG...GGCTGAGGTGTGGAGTGCCATGTGTATCTGGACCCAGACCAGAGAGGACCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124745.8 ENSMUST00000147642.2 |
||
| CDS TCA 90 bp | GACGGCGGTTCGAGGCCTTGCACACAGAGTCCGCGTGGAACCTGCTaGAGTTGCTCTTGTTGTAGACGGGCAAGCCTTTCAGAAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DGGSRPCTQSPRGTC*SCSCCRRASLSESL Trigger: CAGACTTTCTGAAAGGCTTGCCCGTCTACAACAAGAGCAACTTCAGCAGGTTCCACGCGGACTCTGTGTGCAAGGCCTCGAACCGCCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124745.8 ENSMUST00000147642.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGTGAGTACCATGCTACAGCTGAGGGTGCACAGCCACTCTACCAGTCCAGGATTCTTTTTATCCCATaGCTGGTGCAGGTACCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSEYHATAEGAQPLYQSRILFIP*LVQVPQ Trigger: CTGCGGTACCTGCACCAGCAATGGGATAAAAAGAAT...CCTGGACTGGTAGAGTGGCTGTGCACCCTCAGCTGTAGCATGGTACTCACTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124745.8 |
||
| CDS TCA 72 bp | GGGGCTGTCGGTCCGGGCCACCTTGCGAGGTGGCGCTaGGCTCTCGCCCTCCGCCTCCACCTGCTCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GAVGPGHLARWR*ALALRLHLLLV Trigger: GACCAAGAGCAGGTGGAGGCGGAGGGCGAGAGCTCAGCGCCACCTCGCAAGGTGGCCCGGACCGACAGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124745.8 ENSMUST00000138892.2 ENSMUST00000147642.2 |
||
| CDS CAA 72 bp | GTCGGCAGGTATACTGAGGGACGGCGGTTCGAGGCCTaGCACACAGAGTCCGCGTGGAACCTGCTGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VGRYTEGRRFEA*HTESAWNLLKL Trigger: CAACTTCAGCAGGTTCCACGCGGACTCTGTGTGCAAGGCCTCGAACCGCCGTCCCTCAGTATACCTGCCGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124745.8 ENSMUST00000147642.2 |
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| CDS TCA 72 bp | TCGAGGCCTTGCACACAGAGTCCGCGTGGAACCTGCTaGAGTTGCTCTTGTTGTAGACGGGCAAGCCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SRPCTQSPRGTC*SCSCCRRASLS Trigger: TGAAAGGCTTGCCCGTCTACAACAAGAGCAACTTCAGCAGGTTCCACGCGGACTCTGTGTGCAAGGCCTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124745.8 ENSMUST00000147642.2 |
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