Pregenerated sensors for DCXR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039450Ensembl transcript IDs: ENSMUST00000026144.5, ENSMUST00000106148.10
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | GGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTaGAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: GESAHRLSRELY*RGGGHSVLSRE Trigger: CTCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR TCA 90 bp | GGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCAGGGGGCTTTGCCCGCGCCGGTaGCCAGCGCCCGCCGACCTG | + |
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Preference number: 4 (lower is better) Translates to: GGHSVLSRELSRVSVGRGLCPRR*PAPADL Trigger: CAGGTCGGCGGGCGCTGGTCACCGGCGCGGGCAAAG...CCCCCTGCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR TCA 90 bp | GCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTCTTTGCCCGCGCCGGTaGCCAGCGCCCGCCGACCTG | + |
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Preference number: 4 (lower is better) Translates to: ALLQGRRAQCPEQRAEQSLCPRR*PAPADL Trigger: CAGGTCGGCGGGCGCTGGTCACCGGCGCGGGCAAAG...ACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | AGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCGCAAAGTGGAGCCAGTaGTCATGCCACTCCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RGGGHSVLSRELSRVSVGAKWSQ*SCHSGC Trigger: GCAACCGGAGTGGCATGACCACTGGCTCCACTTTGC...GCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | CGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCAGGGGGAAGCCCCCATCCACTaGCAAAGTGGAGCCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RRAQCPEQRAEQSVGGQGEAPIH*QSGASG Trigger: ACCACTGGCTCCACTTTGCCAGTGGATGGGGGCTTC...CCCCTGCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | AGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCGAAGCCCCCATCCACTaGCAAAGTGGAGCCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RGGGHSVLSRELSRVSVGEAPIH*QSGASG Trigger: ACCACTGGCTCCACTTTGCCAGTGGATGGGGGCTTC...GCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR TCA 90 bp | CAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGCACAGGCCTCCTTGGTaGCCTCCAGGAAGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QAEQRALLQGRRAQCPEQHRPPW*PPGRAA Trigger: TGCAGCCCTTCCTGGAGGTCACCAAGGAGGCCTGTG...CTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | GGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCAGGGGGCATCCACTGGCAAAGTaGAGCCAGTGGTCATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGHSVLSRELSRVSVGRGHPLAK*SQWSCH Trigger: GTGGCATGACCACTGGCTCCACTTTGCCAGTGGATG...CCCCCTGCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | ACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGTTAGGGCCTGCTCTGTaGCCTCCCAGTCGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TQAEQRALLQGRRAQCPELGPAL*PPSRPG Trigger: ACCTGGCCGACTGGGAGGCCACAGAGCAGGCCCTAA...CTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | CAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGTTAGGGCCTGCTCTGTaGCCTCCCAGTCGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRALLQGRRAQCPEQRAELGPAL*PPSRPG Trigger: ACCTGGCCGACTGGGAGGCCACAGAGCAGGCCCTAA...CTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | ACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGGGGGGTCACTCCAGTTaGTCCGGCCCATGGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQAEQRALLQGRRAQCPEGGHSS*SGPWVS Trigger: TGACACCCATGGGCCGGACCAACTGGAGTGACCCCC...CTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR TCA 90 bp | GAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTCACAGGCCTCCTTGGTaGCCTCCAGGAAGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ESAHRLSRELYCRGGGHSHRPPW*PPGRAA Trigger: TGCAGCCCTTCCTGGAGGTCACCAAGGAGGCCTGTG...ACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR TCA 90 bp | CGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCAGGGGTCTGAGACACCTGGATaGCAGCCCGAAGATTCACAT | + |
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Preference number: 4 (lower is better) Translates to: RRAQCPEQRAEQSVGGQGSETPG*QPEDSH Trigger: ATGTGAATCTTCGGGCTGTCATCCAGGTGTCTCAGA...CCCCTGCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | AGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCCCAGAGCACCCTTGGTaGAACAGTAGACAGTATGGT | + |
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Preference number: 4 (lower is better) Translates to: RGGGHSVLSRELSRVSVGPEHPW*NSRQYG Trigger: ACCATACTGTCTACTGTTCCACCAAGGGTGCTCTGG...GCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
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| CDS-3UTR GCA 90 bp | CAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGCTCCCCGAGCTATCATaGCCTTGGCCACAATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QAEQRALLQGRRAQCPEQLPELS*PWPQSE Trigger: CTCAGATTGTGGCCAAGGGCATGATAGCTCGGGGAG...CTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | GGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCAGGGGGATTCACAATGGCTCCTaGAACTCCCCGAGCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGHSVLSRELSRVSVGRGIHNGS*NSPSYH Trigger: ATGATAGCTCGGGGAGTTCCAGGAGCCATTGTGAAT...CCCCCTGCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | CAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGGCACGTTGGGAGGCCTaGCTGGAGACATTCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: QAEQRALLQGRRAQCPEQARWEA*LETFTM Trigger: CATTGTGAATGTCTCCAGCCAGGCCTCCCAACGTGC...CTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR GCA 90 bp | GGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCAGTACTGTGGGGTTTACTaGATTCACACGGATCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRRAQCPEQRAEQSVGGQYCGVY*IHTDLV Trigger: CACAAGATCCGTGTGAATGCAGTAAACCCCACAGTA...CTGCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
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| CDS-3UTR CCA 90 bp | CAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGGTTGGGAGGCCTGGCTaGAGACATTCACAATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRALLQGRRAQCPEQRAEVGRPG*RHSQWL Trigger: GAGCCATTGTGAATGTCTCCAGCCAGGCCTCCCAAC...CTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | GCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCACGTTGGGAGGCCTaGCTGGAGACATTCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: AEQRALLQGRRAQCPEQRARWEA*LETFTM Trigger: CATTGTGAATGTCTCCAGCCAGGCCTCCCAACGTGC...TCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | TCCTGGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGTTGGTCAGTGCACGTTaGGAGGCCTGGCTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SWRISTQAEQRALLQGRRLVSAR*EAWLET Trigger: TGTCTCCAGCCAGGCCTCCCAACGTGCACTGACCAA...CCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | TGGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCATTGGTCAGTGCACGTTaGGAGGCCTGGCTGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: WRISTQAEQRALLQGRRALVSAR*EAWLET Trigger: TGTCTCCAGCCAGGCCTCCCAACGTGCACTGACCAA...TGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | GAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTTTCACACGGATCTTGTaGGGCCCAAGCTCTAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ESAHRLSRELYCRGGGHSFTRIL*GPSSRA Trigger: GGCCCTAGAGCTTGGGCCCCACAAGATCCGTGTGAA...ACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
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| CDS-3UTR CCA 90 bp | GAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGCAAAGTGGAGCCAGTaGTCATGCCACTCCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: ESAHRLSRELYCRGGGHSAKWSQ*SCHSGC Trigger: GCAACCGGAGTGGCATGACCACTGGCTCCACTTTGC...ACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR GCA 90 bp | TCCTGGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGCTCCCCGAGCTATCATaGCCTTGGCCACAATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SWRISTQAEQRALLQGRRLPELS*PWPQSE Trigger: CTCAGATTGTGGCCAAGGGCATGATAGCTCGGGGAG...CCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | GCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTATGGCCTTAGCTTTGTaGGGGTCACTCCAGTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: ALLQGRRAQCPEQRAEQSMALAL*GSLQLV Trigger: GACCAACTGGAGTGACCCCCACAAAGCTAAGGCCAT...ACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | TCCTGGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGCATCCACTGGCAAAGTaGAGCCAGTGGTCATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SWRISTQAEQRALLQGRRHPLAK*SQWSCH Trigger: GTGGCATGACCACTGGCTCCACTTTGCCAGTGGATG...CCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR TCA 90 bp | AGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTCCCGAAGATTCACATTaGAGGATGTGTCACAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: STQAEQRALLQGRRAQCPPEDSH*RMCHRP Trigger: AGGCCTGTGACACATCCTTCAATGTGAATCTTCGGG...AGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR TCA 90 bp | GCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGATCTGAGACACCTGGATaGCAGCCCGAAGATTCACAT | + |
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Preference number: 4 (lower is better) Translates to: AEQRALLQGRRAQCPEQRSETPG*QPEDSH Trigger: ATGTGAATCTTCGGGCTGTCATCCAGGTGTCTCAGA...TCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | CAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGATTCACAATGGCTCCTaGAACTCCCCGAGCTATCAT | + |
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Preference number: 4 (lower is better) Translates to: QAEQRALLQGRRAQCPEQIHNGS*NSPSYH Trigger: ATGATAGCTCGGGGAGTTCCAGGAGCCATTGTGAAT...CTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | TGGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCAATGGCCTTAGCTTTGTaGGGGTCACTCCAGTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: WRISTQAEQRALLQGRRAMALAL*GSLQLV Trigger: GACCAACTGGAGTGACCCCCACAAAGCTAAGGCCAT...TGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | CAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGTCAGCAGGAAGAGAATaGTGTCCACGACGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QRALLQGRRAQCPEQRAESAGRE*CPRRSP Trigger: TGGAGAACGTCGTGGACACCATTCTCTTCCTGCTGA...CTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CCA 90 bp | GAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTTCAGCAGGAAGAGAATaGTGTCCACGACGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ESAHRLSRELYCRGGGHSSAGRE*CPRRSP Trigger: TGGAGAACGTCGTGGACACCATTCTCTTCCTGCTGA...ACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR GCA 90 bp | AGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTTACTGTGGGGTTTACTaGATTCACACGGATCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: STQAEQRALLQGRRAQCPYCGVY*IHTDLK Trigger: CTTCAGATCCGTGTGAATGCAGTAAACCCCACAGTA...AGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
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| CDS-3UTR GCA 90 bp | ACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGACGGATCTGAAGAGATaGCAGCAAGGTAAACAACAT | + |
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Preference number: 4 (lower is better) Translates to: TQAEQRALLQGRRAQCPETDLKR*QQGKQH Trigger: ATGTTGTTTACCTTGCTGGCATCTCTTCAGATCCGT...CTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
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| CDS-3UTR CAA 90 bp | AGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCCTGCGCCCGATGCCTTaGCCCGCGCCGGTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: RGGGHSVLSRELSRVSVGLRPMP*PAPVTS Trigger: GCTGGTCACCGGCGCGGGCAAAGGCATCGGGCGCAG...GCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CAA 90 bp | CAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGCTGCGCCCGATGCCTTaGCCCGCGCCGGTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: QAEQRALLQGRRAQCPEQLRPMP*PAPVTS Trigger: GCTGGTCACCGGCGCGGGCAAAGGCATCGGGCGCAG...CTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CAA 90 bp | GGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCAGTGGGGGTCACTCCAGTaGGTCCGGCCCATGGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: GRRAQCPEQRAEQSVGGQWGSLQ*VRPMGV Trigger: GACACCCATGGGCCGGACCAACTGGAGTGACCCCCA...CTGCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS CCA 90 bp | TCACCAGAAGGTCCACGGGTCCCACATTGCTTAGGGCCTGCTCTGTaGCCTCCCAGTCGGCCAGGTCCACACACACAGGCTCCACACCAG | + |
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Preference number: 5 (lower is better) Translates to: SPEGPRVPHCLGPAL*PPSRPGPHTQAPHQ Trigger: CTGGTGTGGAGCCTGTGTGTGTGGACCTGGCCGACTGGGAGGCCACAGAGCAGGCCCTAAGCAATGTGGGACCCGTGGACCTTCTGGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CAA 90 bp | AGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTGTCGGTGGGCTCCACCTCAGCGAACTaGCCCAGTGGGATACGATCC | + |
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Preference number: 5 (lower is better) Translates to: RGGGHSVLSRELSRVSVGSTSAN*PSGIRS Trigger: GGATCGTATCCCACTGGGCAAGTTCGCTGAGGTGGA...GCCCACCGACACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS GCA 90 bp | GCATTGTTCACCAGAAGGTCCACGGGTCCCACATTGCTTAGGGCCTaGTCTGTGGCCTCCCAGTCGGCCAGGTCCACACACACAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: ALFTRRSTGPTLLRA*SVASQSARSTHTGS Trigger: GGAGCCTGTGTGTGTGGACCTGGCCGACTGGGAGGCCACAGAGCAGGCCCTAAGCAATGTGGGACCCGTGGACCTTCTGGTGAACAATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS GCA 90 bp | GAGCCACAGCAGCATTGTTCACCAGAAGGTCCACGGGTCCCACATTaGTTAGGGCCTGCTCTGTGGCCTCCCAGTCGGCCAGGTCCACAC | + |
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Preference number: 5 (lower is better) Translates to: EPQQHCSPEGPRVPH*LGPALWPPSRPGPH Trigger: GTGTGGACCTGGCCGACTGGGAGGCCACAGAGCAGGCCCTAAGCAATGTGGGACCCGTGGACCTTCTGGTGAACAATGCTGCTGTGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CAA 90 bp | GCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGAGTTGGGGGTCACTCCAGTaGGTCCGGCCCATGGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: ALLQGRRAQCPEQRAEQSWGSLQ*VRPMGV Trigger: GACACCCATGGGCCGGACCAACTGGAGTGACCCCCA...ACTCTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS-3UTR CAA 90 bp | AGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCTGAGCAGTCCACGGGTCCCACATaGCTTAGGGCCTGCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RALLQGRRAQCPEQRAEQSTGPT*LRACSV Trigger: CACAGAGCAGGCCCTAAGCAATGTGGGACCCGTGGA...CTGCTCAGCTCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS GCA 90 bp | CCCCATCCACTGGCAAAGTGGAGCCAGTGGTCATGCCACTCCGGTTaGTCAGCAGGAAGAGAATGGTGTCCACGACGTTCTCCACCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PHPLAKWSQWSCHSG*SAGREWCPRRSPPQ Trigger: CTGAGGTGGAGAACGTCGTGGACACCATTCTCTTCCTGCTGAGCAACCGGAGTGGCATGACCACTGGCTCCACTTTGCCAGTGGATGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CCA 90 bp | TGGAGCCAGTGGTCATGCCACTCCGGTTGCTCAGCAGGAAGAGAATaGTGTCCACGACGTTCTCCACCTCAGCGAACTTGCCCAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WSQWSCHSGCSAGRE*CPRRSPPQRTCPVG Trigger: TCCCACTGGGCAAGTTCGCTGAGGTGGAGAACGTCGTGGACACCATTCTCTTCCTGCTGAGCAACCGGAGTGGCATGACCACTGGCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCATCCACGGGTCCCACATaGCTTAGGGCCTGCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WRISTQAEQRALLQGRRASTGPT*LRACSV Trigger: CACAGAGCAGGCCCTAAGCAATGTGGGACCCGTGGA...TGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCCACAGCAGCATaGTTCACCAGAAGGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: QAEQRALLQGRRAQCPEQRATAA*FTRRST Trigger: CGTGGACCTTCTGGTGAACAATGCTGCTGTGGCTCT...CTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CCA 90 bp | CAGTGCACGTTGGGAGGCCTGGCTGGAGACATTCACAATGGCTCCTaGAACTCCCCGAGCTATCATGCCCTTGGCCACAATCTGAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: QCTLGGLAGDIHNGS*NSPSYHALGHNLRH Trigger: GTGTCTCAGATTGTGGCCAAGGGCATGATAGCTCGGGGAGTTCCAGGAGCCATTGTGAATGTCTCCAGCCAGGCCTCCCAACGTGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CCA 90 bp | GGGGGTCACTCCAGTTGGTCCGGCCCATGGGTGTCATCACTACTGTaGGGTTTACTGCATTCACACGGATCTTGTGGGGCCCAAGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GGHSSWSGPWVSSLL*GLLHSHGSCGAQAL Trigger: TAGAGCTTGGGCCCCACAAGATCCGTGTGAATGCAGTAAACCCCACAGTAGTGATGACACCCATGGGCCGGACCAACTGGAGTGACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
||
| CDS CCA 90 bp | GCGAACTTGCCCAGTGGGATACGATCCAGCATGGCCTTAGCTTTGTaGGGGTCACTCCAGTTGGTCCGGCCCATGGGTGTCATCACTACT | + |
|
Preference number: 5 (lower is better) Translates to: ANLPSGIRSSMALAL*GSLQLVRPMGVITT Trigger: AGTAGTGATGACACCCATGGGCCGGACCAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCTGGATCGTATCCCACTGGGCAAGTTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS-3UTR CAA 90 bp | GCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGGCCCGAAGATTCACATaGAAGGATGTGTCACAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHRLSRELYCRGGGHSVLARRFT*KDVSQA Trigger: GGCCTGTGACACATCCTTCAATGTGAATCTTCGGGC...CAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS-3UTR CAA 90 bp | ATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTTCCACCTCAGCGAACTaGCCCAGTGGGATACGATCC | + |
|
Preference number: 5 (lower is better) Translates to: ISTQAEQRALLQGRRAQCSTSAN*PSGIRS Trigger: GGATCGTATCCCACTGGGCAAGTTCGCTGAGGTGGA...ACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS GCA 90 bp | TTGAAGGATGTGTCACAGGCCTCCTTGGTGACCTCCAGGAAGGGCTaGAACAGAGCCACAGCAGCATTGTTCACCAGAAGGTCCACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LKDVSQASLVTSRKG*NRATAALFTRRSTG Trigger: ACCCGTGGACCTTCTGGTGAACAATGCTGCTGTGGCTCTGTTGCAGCCCTTCCTGGAGGTCACCAAGGAGGCCTGTGACACATCCTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CCA 90 bp | GAGAATGGTGTCCACGACGTTCTCCACCTCAGCGAACTTGCCCAGTaGGATACGATCCAGCATGGCCTTAGCTTTGTGGGGGTCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ENGVHDVLHLSELAQ*DTIQHGLSFVGVTP Trigger: TGGAGTGACCCCCACAAAGCTAAGGCCATGCTGGATCGTATCCCACTGGGCAAGTTCGCTGAGGTGGAGAACGTCGTGGACACCATTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CCA 90 bp | GGGGGTCACTCCAGTTGGTCCGGCCCATGGGTGTCATCACTACTGTaGGGTTTACTGCATTCACACGGATCTGAAGAGATGCCAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGHSSWSGPWVSSLL*GLLHSHGSEEMPAR Trigger: CCTTGCTGGCATCTCTTCAGATCCGTGTGAATGCAGTAAACCCCACAGTAGTGATGACACCCATGGGCCGGACCAACTGGAGTGACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
||
| CDS-3UTR CAA 90 bp | GCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTCCTGAGCAGAGAGCCCGAAGATTCACATaGAAGGATGTGTCACAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEQRALLQGRRAQCPEQRARRFT*KDVSQA Trigger: GGCCTGTGACACATCCTTCAATGTGAATCTTCGGGC...TCTCTGCTCAGGACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS-3UTR CAA 90 bp | GAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTAGCATGGCCTTAGCTTaGTGGGGGTCACTCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESAHRLSRELYCRGGGHSSMALA*WGSLQL Trigger: CAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCT...ACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGAGCATGGCCTTAGCTTaGTGGGGGTCACTCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SWRISTQAEQRALLQGRRSMALA*WGSLQL Trigger: CAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCT...CCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGTCATGCCACTCCGGTaGCTCAGCAGGAAGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SWRISTQAEQRALLQGRRVMPLR*LSRKRM Trigger: CATTCTCTTCCTGCTGAGCAACCGGAGTGGCATGAC...CCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGAATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCAGTCATGCCACTCCGGTaGCTCAGCAGGAAGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: WRISTQAEQRALLQGRRAVMPLR*LSRKRM Trigger: CATTCTCTTCCTGCTGAGCAACCGGAGTGGCATGAC...TGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGATTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS GCA 90 bp | GGTAAACAACATGGGAGGGCACCAGTAGACAGTATGGTTGGTCAGTaGACGTTGGGAGGCCTGGCTGGAGACATTCACAATGGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GKQHGRAPVDSMVGQ*TLGGLAGDIHNGSW Trigger: CCAGGAGCCATTGTGAATGTCTCCAGCCAGGCCTCCCAACGTGCACTGACCAACCATACTGTCTACTGGTGCCCTCCCATGTTGTTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
||
| CDS CCA 90 bp | ACCAGTAGACAGTATGGTTGGTCAGTGCACGTTGGGAGGCCTGGCTaGAGACATTCACAATGGCTCCTGGAACTCCCCGAGCTATCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TSRQYGWSVHVGRPG*RHSQWLLELPELSC Trigger: GCATGATAGCTCGGGGAGTTCCAGGAGCCATTGTGAATGTCTCCAGCCAGGCCTCCCAACGTGCACTGACCAACCATACTGTCTACTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
||
| CDS CCA 90 bp | AACAGTAGACAGTATGGTTGGTCAGTGCACGTTGGGAGGCCTGGCTaGAGACATTCACAATGGCTCCTGGAACTCCCCGAGCTATCATGC | + |
|
Preference number: 5 (lower is better) Translates to: NSRQYGWSVHVGRPG*RHSQWLLELPELSC Trigger: GCATGATAGCTCGGGGAGTTCCAGGAGCCATTGTGAATGTCTCCAGCCAGGCCTCCCAACGTGCACTGACCAACCATACTGTCTACTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
||
| CDS CCA 90 bp | GCTCTAGGGCCATCATCTTGGTCAACATGTCCAGAGCACCCTTGGTaGAACAGTAGACAGTATGGTTGGTCAGTGCACGTTGGGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALGPSSWSTCPEHPW*NSRQYGWSVHVGRP Trigger: AGGCCTCCCAACGTGCACTGACCAACCATACTGTCTACTGTTCCACCAAGGGTGCTCTGGACATGTTGACCAAGATGATGGCCCTAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
||
| CDS-3UTR CAA 90 bp | ATCAGCACACAGGCTGAGCAGAGAGCTTTATTGCAGGGGCGGAGGGCACAGTGTTCTAGGGCCATCATCTaGGTCAACATGTCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISTQAEQRALLQGRRAQCSRAII*VNMSRA Trigger: TGCTCTGGACATGTTGACCAAGATGATGGCCCTAGA...ACACTGTGCCCTCCGCCCCTGCAATAAAGCTCTCTGCTCAGCCTGTGTGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
||
| CDS CCA 90 bp | CAAGCTCTAGGGCCATCATCTTGGTCAACATGTCCAGAGCACCCTTaGTGGAACAGTAGACAGTATGGTTGGTCAGTGCACGTTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QALGPSSWSTCPEHP*WNSRQYGWSVHVGR Trigger: CCTCCCAACGTGCACTGACCAACCATACTGTCTACTGTTCCACCAAGGGTGCTCTGGACATGTTGACCAAGATGATGGCCCTAGAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
||
| CDS CCA 90 bp | CATTCACACGGATCTTGTGGGGCCCAAGCTCTAGGGCCATCATCTTaGTCAACATGTCCAGAGCACCCTTGGTGGAACAGTAGACAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HSHGSCGAQALGPSS*STCPEHPWWNSRQY Trigger: ATACTGTCTACTGTTCCACCAAGGGTGCTCTGGACATGTTGACCAAGATGATGGCCCTAGAGCTTGGGCCCCACAAGATCCGTGTGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
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| CDS GCA 90 bp | CCAGTTGGTCCGGCCCATGGGTGTCATCACTACTGTGGGGTTTACTaGATTCACACGGATCTGAAGAGATGCCAGCAAGGTAAACAACAT | + |
|
Preference number: 5 (lower is better) Translates to: PVGPAHGCHHYCGVY*IHTDLKRCQQGKQH Trigger: ATGTTGTTTACCTTGCTGGCATCTCTTCAGATCCGTGTGAATGCAGTAAACCCCACAGTAGTGATGACACCCATGGGCCGGACCAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
||
| CDS GCA 90 bp | CATCACTACTGTGGGGTTTACTGCATTCACACGGATCTGAAGAGATaGCAGCAAGGTAAACAACATGGGAGGGCACCAGTAGACAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: HHYCGVYCIHTDLKR*QQGKQHGRAPVDSM Trigger: CATACTGTCTACTGGTGCCCTCCCATGTTGTTTACCTTGCTGGCATCTCTTCAGATCCGTGTGAATGCAGTAAACCCCACAGTAGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
||
| CDS CAA 90 bp | GCACCAGCCGCCTTCAACGCCAGCACAGTGCTGCGCCCGATGCCTTaGCCCGCGCCGGTGACCAGCGCCCGCCGACCTGCAAGCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: APAAFNASTVLRPMP*PAPVTSARRPASPR Trigger: CCTGGGGCTTGCAGGTCGGCGGGCGCTGGTCACCGGCGCGGGCAAAGGCATCGGGCGCAGCACTGTGCTGGCGTTGAAGGCGGCTGGTGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CAA 72 bp | GCCTTCAACGCCAGCACAGTGCTGCGCCCGATGCCTTaGCCCGCGCCGGTGACCAGCGCCCGCCGACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AFNASTVLRPMP*PAPVTSARRPA Trigger: TGCAGGTCGGCGGGCGCTGGTCACCGGCGCGGGCAAAGGCATCGGGCGCAGCACTGTGCTGGCGTTGAAGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS GCA 72 bp | ACCAGAAGGTCCACGGGTCCCACATTGCTTAGGGCCTaGTCTGTGGCCTCCCAGTCGGCCAGGTCCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: TRRSTGPTLLRA*SVASQSARSTH Trigger: GTGTGTGGACCTGGCCGACTGGGAGGCCACAGAGCAGGCCCTAAGCAATGTGGGACCCGTGGACCTTCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CCA 72 bp | CCCAGTGGGATACGATCCAGCATGGCCTTAGCTTTGTaGGGGTCACTCCAGTTGGTCCGGCCCATGGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PSGIRSSMALAL*GSLQLVRPMGV Trigger: GACACCCATGGGCCGGACCAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCTGGATCGTATCCCACTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
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| CDS CCA 72 bp | CCAGGAAGCCCCCATCCACTGGCAAAGTGGAGCCAGTaGTCATGCCACTCCGGTTGCTCAGCAGGAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PGSPHPLAKWSQ*SCHSGCSAGRE Trigger: TTCTCTTCCTGCTGAGCAACCGGAGTGGCATGACCACTGGCTCCACTTTGCCAGTGGATGGGGGCTTCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CAA 72 bp | TCCAGCATGGCCTTAGCTTTGTGGGGGTCACTCCAGTaGGTCCGGCCCATGGGTGTCATCACTACTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSMALALWGSLQ*VRPMGVITTVG Trigger: CCCCACAGTAGTGATGACACCCATGGGCCGGACCAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CAA 72 bp | TTGCCCAGTGGGATACGATCCAGCATGGCCTTAGCTTaGTGGGGGTCACTCCAGTTGGTCCGGCCCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPSGIRSSMALA*WGSLQLVRPMG Trigger: ACCCATGGGCCGGACCAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCTGGATCGTATCCCACTGGGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CAA 90 bp | CCCCCATCCACTGGCAAAGTGGAGCCAGTGGTCATGCCACTCCGGTaGCTCAGCAGGAAGAGAATGGTGTCCACGACGTTCTCCACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPSTGKVEPVVMPLR*LSRKRMVSTTFSTS Trigger: TGAGGTGGAGAACGTCGTGGACACCATTCTCTTCCTGCTGAGCAACCGGAGTGGCATGACCACTGGCTCCACTTTGCCAGTGGATGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CAA 90 bp | TCAGCGAACTTGCCCAGTGGGATACGATCCAGCATGGCCTTAGCTTaGTGGGGGTCACTCCAGTTGGTCCGGCCCATGGGTGTCATCACT | + |
|
Preference number: 6 (lower is better) Translates to: SANLPSGIRSSMALA*WGSLQLVRPMGVIT Trigger: AGTGATGACACCCATGGGCCGGACCAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCTGGATCGTATCCCACTGGGCAAGTTCGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS GCA 72 bp | GTGTCACAGGCCTCCTTGGTGACCTCCAGGAAGGGCTaGAACAGAGCCACAGCAGCATTGTTCACCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSQASLVTSRKG*NRATAALFTRR Trigger: CCTTCTGGTGAACAATGCTGCTGTGGCTCTGTTGCAGCCCTTCCTGGAGGTCACCAAGGAGGCCTGTGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS GCA 72 bp | AGCCCCCATCCACTGGCAAAGTGGAGCCAGTGGTCATaGCACTCCGGTTGCTCAGCAGGAAGAGAATGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPHPLAKWSQWS*HSGCSAGREWC Trigger: ACACCATTCTCTTCCTGCTGAGCAACCGGAGTGGCATGACCACTGGCTCCACTTTGCCAGTGGATGGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CCA 72 bp | CAGTATGGTTGGTCAGTGCACGTTGGGAGGCCTGGCTaGAGACATTCACAATGGCTCCTGGAACTCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: QYGWSVHVGRPG*RHSQWLLELPE Trigger: CTCGGGGAGTTCCAGGAGCCATTGTGAATGTCTCCAGCCAGGCCTCCCAACGTGCACTGACCAACCATACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CAA 90 bp | GGGATACGATCCAGCATGGCCTTAGCTTTGTGGGGGTCACTCCAGTaGGTCCGGCCCATGGGTGTCATCACTACTGTGGGGTTTACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GIRSSMALALWGSLQ*VRPMGVITTVGFTA Trigger: TGCAGTAAACCCCACAGTAGTGATGACACCCATGGGCCGGACCAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCTGGATCGTATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CAA 90 bp | CAACATGGGAGGGCACCAGTAGACAGTATGGTTGGTCAGTGCACGTaGGGAGGCCTGGCTGGAGACATTCACAATGGCTCCTGGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: QHGRAPVDSMVGQCT*GGLAGDIHNGSWNS Trigger: GGAGTTCCAGGAGCCATTGTGAATGTCTCCAGCCAGGCCTCCCAACGTGCACTGACCAACCATACTGTCTACTGGTGCCCTCCCATGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
||
| CDS GCA 72 bp | CTGGCAAAGTGGAGCCAGTGGTCATGCCACTCCGGTTaGTCAGCAGGAAGAGAATGGTGTCCACGACGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LAKWSQWSCHSG*SAGREWCPRRS Trigger: AGAACGTCGTGGACACCATTCTCTTCCTGCTGAGCAACCGGAGTGGCATGACCACTGGCTCCACTTTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CCA 72 bp | TCCAGTTGGTCCGGCCCATGGGTGTCATCACTACTGTaGGGTTTACTGCATTCACACGGATCTTGTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSWSGPWVSSLL*GLLHSHGSCGA Trigger: GGCCCCACAAGATCCGTGTGAATGCAGTAAACCCCACAGTAGTGATGACACCCATGGGCCGGACCAACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
||
| CDS CCA 72 bp | TGGTCATGCCACTCCGGTTGCTCAGCAGGAAGAGAATaGTGTCCACGACGTTCTCCACCTCAGCGAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WSCHSGCSAGRE*CPRRSPPQRTC Trigger: GCAAGTTCGCTGAGGTGGAGAACGTCGTGGACACCATTCTCTTCCTGCTGAGCAACCGGAGTGGCATGACCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS CAA 72 bp | CGGATCTTGTGGGGCCCAAGCTCTAGGGCCATCATCTaGGTCAACATGTCCAGAGCACCCTTGGTGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: RILWGPSSRAII*VNMSRAPLVEQ Trigger: CTGTTCCACCAAGGGTGCTCTGGACATGTTGACCAAGATGATGGCCCTAGAGCTTGGGCCCCACAAGATCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
||
| CDS GCA 72 bp | CATGGGAGGGCACCAGTAGACAGTATGGTTGGTCAGTaGACGTTGGGAGGCCTGGCTGGAGACATTCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: HGRAPVDSMVGQ*TLGGLAGDIHN Trigger: ATTGTGAATGTCTCCAGCCAGGCCTCCCAACGTGCACTGACCAACCATACTGTCTACTGGTGCCCTCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
||
| CDS CCA 72 bp | GGATCTTGTGGGGCCCAAGCTCTAGGGCCATCATCTTaGTCAACATGTCCAGAGCACCCTTGGTGGAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSCGAQALGPSS*STCPEHPWWNS Trigger: ACTGTTCCACCAAGGGTGCTCTGGACATGTTGACCAAGATGATGGCCCTAGAGCTTGGGCCCCACAAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
||
| CDS TCA 72 bp | GGAACTCCCCGAGCTATCATGCCCTTGGCCACAATCTaGGACACCTGGATGACAGCCCGAAGATTCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: GTPRAIMPLATI*DTWMTARRFTL Trigger: CAATGTGAATCTTCGGGCTGTCATCCAGGTGTCTCAGATTGTGGCCAAGGGCATGATAGCTCGGGGAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026144.5 ENSMUST00000106148.10 |
||
| CDS GCA 72 bp | CCGGCCCATGGGTGTCATCACTACTGTGGGGTTTACTaGATTCACACGGATCTGAAGAGATGCCAGCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: PAHGCHHYCGVY*IHTDLKRCQQG Trigger: ACCTTGCTGGCATCTCTTCAGATCCGTGTGAATGCAGTAAACCCCACAGTAGTGATGACACCCATGGGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
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| CDS CCA 72 bp | TCCAGTTGGTCCGGCCCATGGGTGTCATCACTACTGTaGGGTTTACTGCATTCACACGGATCTGAAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: SSWSGPWVSSLL*GLLHSHGSEEM Trigger: CATCTCTTCAGATCCGTGTGAATGCAGTAAACCCCACAGTAGTGATGACACCCATGGGCCGGACCAACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106148.10 |
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| CDS CCA 72 bp | CCATCATCTTGGTCAACATGTCCAGAGCACCCTTGGTaGAACAGTAGACAGTATGGTTGGTCAGTGCACGTT | + |
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Preference number: 6 (lower is better) Translates to: PSSWSTCPEHPW*NSRQYGWSVHV Trigger: AACGTGCACTGACCAACCATACTGTCTACTGTTCCACCAAGGGTGCTCTGGACATGTTGACCAAGATGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026144.5 |
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