Pregenerated sensors for DCX (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031285

Ensembl transcript IDs: ENSMUST00000033642.10, ENSMUST00000087313.10, ENSMUST00000112851.8, ENSMUST00000112856.3

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	GTGCAGTATTTGCTAAGTATGAAGCAGCCTAGGCGTGCTTGCGCATaGGCGCGCGAGCACACACACACACACACACACACACACACACAC	+
Preference number: 1 (lower is better) Translates to: VQYLLSMKQPRRACA*AREHTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCGCGCGCGCATGCGCAAGCACGCCTAGGCTGCTTCATACTTAGCAAATACTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR GCA 90 bp	CGAGCTATTTGGAAGATTCCTCAAGGTAGGGCAGCAACCCTCTGGTaGTCAACGTCTCAATGCCTCCCTCTCCTTGGAACTGTCTGCAGG	+
Preference number: 1 (lower is better) Translates to: RAIWKIPQGRAATLW*STSQCLPLLGTVCR Trigger: CCTGCAGACAGTTCCAAGGAGAGGGAGGCATTGAGACGTTGAGCACCAGAGGGTTGCTGCCCTACCTTGAGGAATCTTCCAAATAGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 90 bp	CAGCGAGCTATTTGGAAGATTCCTCAAGGTAGGGCAGCAACCCTCTaGTGCTCAACGTCTCAATGCCTCCCTCTCCTTGGAACTGTCTGC	+
Preference number: 1 (lower is better) Translates to: QRAIWKIPQGRAATL*CSTSQCLPLLGTVC Trigger: GCAGACAGTTCCAAGGAGAGGGAGGCATTGAGACGTTGAGCACCAGAGGGTTGCTGCCCTACCTTGAGGAATCTTCCAAATAGCTCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 90 bp	TCTCAATGCCTCCCTCTCCTTGGAACTGTCTGCAGGCCATGTGGATaGAGTAATGTGAAAGTGAGGAGGAAGGGCCAGATTATATTGCTG	+
Preference number: 1 (lower is better) Translates to: SQCLPLLGTVCRPCG*SNVKVRRKGQIILL Trigger: CAGCAATATAATCTGGCCCTTCCTCCTCACTTTCACATTACTTCATCCACATGGCCTGCAGACAGTTCCAAGGAGAGGGAGGCATTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 90 bp	GTTCACAACACCTCACACACATGGGGGAACTTCTCTAGACATCCTTaGAGTCCTCAAACCAAACAGCCCTCATCAAATTATGGTGGGGGA	+
Preference number: 1 (lower is better) Translates to: VHNTSHTWGNFSRHP*SPQTKQPSSNYGGG Trigger: TCCCCCACCATAATTTGATGAGGGCTGTTTGGTTTGAGGACTTCAAGGATGTCTAGAGAAGTTCCCCCATGTGTGTGAGGTGTTGTGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 90 bp	AGGAACAAGCAACATATTCTTTGTGTGTGTGTGTGTGTGTGTGTGTaGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAGG	+
Preference number: 1 (lower is better) Translates to: RNKQHILCVCVCVCV*ERERERERERERRR Trigger: CCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAAAGAATATGTTGCTTGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR GCA 90 bp	CACAGGAGATATAAAGGGCCTGCTCTAACCAGTTTACATGGGCCTTaGCAAACATTCCAGTCCAAGAGAGAACAGCAAACCAAAGAAGAG	+
Preference number: 1 (lower is better) Translates to: HRRYKGPALTSLHGP*QTFQSKREQQTKEE Trigger: CTCTTCTTTGGTTTGCTGTTCTCTCTTGGACTGGAATGTTTGGCAAGGCCCATGTAAACTGGTTAGAGCAGGCCCTTTATATCTCCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 90 bp	GTCACATCAAAAGTCGCTGGTGTTTCTCCATCTCAACAGCCAGGATaGATGCTAGACAATACACTGGGGGCTCAATTAAGAGCAAAGAGT	+
Preference number: 1 (lower is better) Translates to: VTSKVAGVSPSQQPG*MLDNTLGAQLRAKS Trigger: ACTCTTTGCTCTTAATTGAGCCCCCAGTGTATTGTCTAGCATTCATCCTGGCTGTTGAGATGGAGAAACACCAGCGACTTTTGATGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR GCA 90 bp	CCAGGAAAGCCTTGCTGCAAAGAAACCTACACATACAGATCATGTTaGCCTAACTTCTGTCATGGAAAGCACAGAAACAGGCTACACAGA	+
Preference number: 1 (lower is better) Translates to: PGKPCCKETYTYRSC*PNFCHGKHRNRLHR Trigger: TCTGTGTAGCCTGTTTCTGTGCTTTCCATGACAGAAGTTAGGGCAACATGATCTGTATGTGTAGGTTTCTTTGCAGCAAGGCTTTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 90 bp	TGGAGAGACTGGGCATGGGGACACAAGTTTATGCAAATCAAGCATTaGGTCATTTGCCTTCAACTTAGGCTTGATGATTCTAGGACATGG	+
Preference number: 1 (lower is better) Translates to: WRDWAWGHKFMQIKH*VICLQLRLDDSRTW Trigger: CCATGTCCTAGAATCATCAAGCCTAAGTTGAAGGCAAATGACTCAATGCTTGATTTGCATAAACTTGTGTCCCCATGCCCAGTCTCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 90 bp	TCCGTAAAGCTATGCTGTCATTGGGTTTCTGCTAGAGAAGTCTCTTaGTACAACTGTTCCCAAGGCAGTCTCATCTCTTGCAACATTCTC	+
Preference number: 1 (lower is better) Translates to: SVKLCCHWVSAREVS*YNCSQGSLISCNIL Trigger: GAGAATGTTGCAAGAGATGAGACTGCCTTGGGAACAGTTGTATCAAGAGACTTCTCTAGCAGAAACCCAATGACAGCATAGCTTTACGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 90 bp	AAAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTaGAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGG	+
Preference number: 1 (lower is better) Translates to: KKIARAALWLPSIEH*RCTVFTVHNTSHTW Trigger: CCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 90 bp	GAGCATGGCTACAAGGGCGTAGAGATTGAGGATAAACACAAGACTTaGTTATCTTTCTCTGGCTTGGCTCACTGCCATATTTTAAAGGAA	+
Preference number: 1 (lower is better) Translates to: EHGYKGVEIEDKHKT*LSFSGLAHCHILKE Trigger: TTCCTTTAAAATATGGCAGTGAGCCAAGCCAGAGAAAGATAATCAAGTCTTGTGTTTATCCTCAATCTCTACGCCCTTGTAGCCATGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 90 bp	ATGGAAGCTACCTACCCACTTTACAATTCCTTGGTCACTCCCAGATaGAGGGAAGAAAAGATAGAGAAGTTCCTGAACTTGGGTAAATTT	+
Preference number: 1 (lower is better) Translates to: MEATYPLYNSLVTPR*REEKIEKFLNLGKF Trigger: AAATTTACCCAAGTTCAGGAACTTCTCTATCTTTTCTTCCCTCCATCTGGGAGTGACCAAGGAATTGTAAAGTGGGTAGGTAGCTTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 90 bp	GCAACGGATTCCAAAAGAGGAGGAAGTACCTCACAAGTCAAAGAATaGATGTTTTTGCTACCGAATGAGAGACTGATAACTGAGAACAAA	+
Preference number: 1 (lower is better) Translates to: ATDSKRGGSTSQVKE*MFLLPNERLITENK Trigger: TTTGTTCTCAGTTATCAGTCTCTCATTCGGTAGCAAAAACATCCATTCTTTGACTTGTGAGGTACTTCCTCCTCTTTTGGAATCCGTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 90 bp	TGGTCTTCTGACTTCTCTGTTCTCTTTGACCTTTTTCAACTCAACTaGTCTTGTAATCCAAGTAGGAAAGTGCCTTACTTTCAACTGAGA	+
Preference number: 1 (lower is better) Translates to: WSSDFSVLFDLFQLN*SCNPSRKVPYFQLR Trigger: TCTCAGTTGAAAGTAAGGCACTTTCCTACTTGGATTACAAGAGCAGTTGAGTTGAAAAAGGTCAAAGAGAACAGAGAAGTCAGAAGACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 90 bp	TCAAAAAGAAAGCACAAAAAGTCAGTGACCTATTCTTGCTCCAGGTaGTCATGTTTGAAAGAAGAGGAAATCCTTCAGGATTCACGTAAC	+
Preference number: 1 (lower is better) Translates to: SKRKHKKSVTYSCSR*SCLKEEEILQDSRN Trigger: GTTACGTGAATCCTGAAGGATTTCCTCTTCTTTCAAACATGACCACCTGGAGCAAGAATAGGTCACTGACTTTTTGTGCTTTCTTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 90 bp	CGAGACATTCTGAAGCTTCGGGTCTTTGTTTTAGTTTACAAGACTTaGTCTTCTGACTTCTCTGTTCTCTTTGACCTTTTTCAACTCAAC	+
Preference number: 1 (lower is better) Translates to: RDILKLRVFVLVYKT*SSDFSVLFDLFQLN Trigger: GTTGAGTTGAAAAAGGTCAAAGAGAACAGAGAAGTCAGAAGACCAAGTCTTGTAAACTAAAACAAAGACCCGAAGCTTCAGAATGTCTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 90 bp	GCATGGCTTTCACCTAACTTTCGTTGTCTTGGCTATTATGGGCTATaGATACAGAGAAAAAGCAATGTTATAAACCTGTACCTCAAAGAC	+
Preference number: 1 (lower is better) Translates to: AWLSPNFRCLGYYGL*IQRKSNVINLYLKD Trigger: GTCTTTGAGGTACAGGTTTATAACATTGCTTTTTCTCTGTATTCATAGCCCATAATAGCCAAGACAACGAAAGTTAGGTGAAAGCCATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR TCA 90 bp	CTTTGCTCCCACTCTTTCAGTAGAATCTCCATGTCTCATCTTAAATaGATACTTGGGACAACATGGGATTTGCTCAAAGAACAACATAGA	+
Preference number: 1 (lower is better) Translates to: LCSHSFSRISMSHLK*ILGTTWDLLKEQHR Trigger: TCTATGTTGTTCTTTGAGCAAATCCCATGTTGTCCCAAGTATTCATTTAAGATGAGACATGGAGATTCTACTGAAAGAGTGGGAGCAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR TCA 90 bp	ATGCCATTCCTTGAGAAAGGGTCAATAACTTCTGAGAAATTGTTGTaGAATTCTCTTCACCCCTTTTGGGTTATTTGCTCCTTGCTAACT	+
Preference number: 1 (lower is better) Translates to: MPFLEKGSITSEKLL*NSLHPFWVICSLLT Trigger: AGTTAGCAAGGAGCAAATAACCCAAAAGGGGTGAAGAGAATTTCACAACAATTTCTCAGAAGTTATTGACCCTTTCTCAAGGAATGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 90 bp	GAGAGAGAGAGAGAGAGAGAGAATATAATGTGTAAGGTCACTGTATaGTATTTTTGGTATAGATACAAATATTCAGTGTCAGCCAGGGCA	+
Preference number: 1 (lower is better) Translates to: ERERERENIMCKVTV*YFWYRYKYSVSARA Trigger: TGCCCTGGCTGACACTGAATATTTGTATCTATACCAAAAATAGCATACAGTGACCTTACACATTATATTCTCTCTCTCTCTCTCTCTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 90 bp	CTTCTAGAATTCAGTGAATATTCATTAGTTCCAGGAAAGCCTTGCTaGAAAGAAACCTACACATACAGATCATGTTGCCCTAACTTCTGT	+
Preference number: 1 (lower is better) Translates to: LLEFSEYSLVPGKPC*KETYTYRSCCPNFC Trigger: ACAGAAGTTAGGGCAACATGATCTGTATGTGTAGGTTTCTTTGCAGCAAGGCTTTCCTGGAACTAATGAATATTCACTGAATTCTAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 90 bp	GATCTTCTAGAATTCAGTGAATATTCATTAGTTCCAGGAAAGCCTTaGTGCAAAGAAACCTACACATACAGATCATGTTGCCCTAACTTC	+
Preference number: 1 (lower is better) Translates to: DLLEFSEYSLVPGKP*CKETYTYRSCCPNF Trigger: GAAGTTAGGGCAACATGATCTGTATGTGTAGGTTTCTTTGCAGCAAGGCTTTCCTGGAACTAATGAATATTCACTGAATTCTAGAAGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 90 bp	AGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTaGCATGCATGGCTTTCACCTAACTTTCGTTGTCTTGGCTATTAT	+
Preference number: 1 (lower is better) Translates to: RSEGNLPISSNQTQN*HAWLSPNFRCLGYY Trigger: ATAATAGCCAAGACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR TCA 90 bp	GTACTAACTTGTACATTAGAAAGCCTCCTGGAAGGATCATGTATGTaGCATCATGTACCCCAAACTAATCAATTGATTGATTCCAAATTT	+
Preference number: 1 (lower is better) Translates to: VLTCTLESLLEGSCM*HHVPQTNQLIDSKF Trigger: AAATTTGGAATCAATCAATTGATTAGTTTGGGGTACATGATGTCACATACATGATCCTTCCAGGAGGCTTTCTAATGTACAAGTTAGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CCA 90 bp	AGAGAGAGAGAGAATATAATGTGTAAGGTCACTGTATGCTATTTTTaGTATAGATACAAATATTCAGTGTCAGCCAGGGCACAATTTAGT	+
Preference number: 1 (lower is better) Translates to: RERENIMCKVTVCYF*YRYKYSVSARAQFS Trigger: ACTAAATTGTGCCCTGGCTGACACTGAATATTTGTATCTATACCAAAAATAGCATACAGTGACCTTACACATTATATTCTCTCTCTCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 90 bp	CCACCAAGTTGTCATCAATTCATGTTGAGTTGTCTTGTGCAGTATTaGCTAAGTATGAAGCAGCCTAGGCGTGCTTGCGCATGCGCGCGC	+
Preference number: 2 (lower is better) Translates to: PPSCHQFMLSCLVQY*LSMKQPRRACACAR Trigger: GCGCGCGCATGCGCAAGCACGCCTAGGCTGCTTCATACTTAGCAAATACTGCACAAGACAACTCAACATGAATTGATGACAACTTGGTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	TTTGCCCCTATTTCTATTTCTGTGGGGAAGAACAGTCAGGAGGTAGGAACAAGCGTGAGACCAAGGATCTaGCTTGCCACTCTCCTGAGA	+
Preference number: 2 (lower is better) Translates to: FAPISISVGKNSQEVGTSVRPRI*LATLLR Trigger: TCTCAGGAGAGTGGCAAGTCAGATCCTTGGTCTCAC...GCTTGTTCCTACCTCCTGACTGTTCTTCCCCACAGAAATAGAAATAGGGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR-3UTR CCA 90 bp	CTGATGTCTCCAAATGCCTCACAAGTAATGCAGGGATCAGGGACATCCTTGGGTACAGCCCTAAGCACATaGTGTCACATCAAAAGTCGC	+
Preference number: 2 (lower is better) Translates to: LMSPNASQVMQGSGTSLGTALST*CHIKSR Trigger: GCGACTTTTGATGTGACACCATGTGCTTAGGGCTGT...ACCCAAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATTTGGAGACATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 90 bp	CCCCTGCCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTaGTCATCAATTCATGTTGAGTTGTCTTGTGCAGTATTTGCTAAG	+
Preference number: 2 (lower is better) Translates to: PLPSYFPLHISNATK*SSIHVELSCAVFAK Trigger: CTTAGCAAATACTGCACAAGACAACTCAACATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGGCAGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR GCA 90 bp	CTGATGTCTCCAAATGCCTCACAAGTAATGCAGGGATCAGGGACATCCTTGGGTGTTCCAGGAAAGCCTTaGTGCAAAGAAACCTACACA	+
Preference number: 2 (lower is better) Translates to: LMSPNASQVMQGSGTSLGVPGKP*CKETYT Trigger: TGTGTAGGTTTCTTTGCAGCAAGGCTTTCCTGGAAC...ACCCAAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATTTGGAGACATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	GTGCAGTATTTGCTAAGTATGAAGCAGCCTAGGCGTGCTTGCGCATGCGCGCGCTTGTCTTGGCTATTATaGGCTATGAATACAGAGAAA	+
Preference number: 2 (lower is better) Translates to: VQYLLSMKQPRRACACARLSWLL*AMNTEK Trigger: TTTCTCTGTATTCATAGCCCATAATAGCCAAGACAA...GCGCGCGCATGCGCAAGCACGCCTAGGCTGCTTCATACTTAGCAAATACTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	CACACACACACACACACACACACACACACACACACACAAATGAACCCCACACTCTGGAGTAGCACACTTTaGAGTTCTGGAAAAGTCACT	+
Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTQMNPTLWSSTL*SSGKVT Trigger: AGTGACTTTTCCAGAACTTCAAAGTGTGCTACTCCA...GAGTGTGGGGTTCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR GCA 90 bp	AAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTGAAGATGTACATCCTACTTCCCCCTaGACATCAGCAATGCCACCA	+
Preference number: 2 (lower is better) Translates to: KRLQEQLFGCPVLNTEDVHPTSP*TSAMPP Trigger: TGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATG...TACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	CTGATGTCTCCAAATGCCTCACAAGTAATGCAGGGATCAGGGACATCCTTGGGTTCTGAACAAATTGAGTaGGGAAAATACAAAGGCCCC	+
Preference number: 2 (lower is better) Translates to: LMSPNASQVMQGSGTSLGSEQIE*GKYKGP Trigger: GGGGCCTTTGTATTTTCCCCACTCAATTTGTTCAGA...ACCCAAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATTTGGAGACATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	CTGATGTCTCCAAATGCCTCACAAGTAATGCAGGGATCAGGGACATCCTTGGGTTCTCTTCACCCCTTTTaGGTTATTTGCTCCTTGCTA	+
Preference number: 2 (lower is better) Translates to: LMSPNASQVMQGSGTSLGSLHPF*VICSLL Trigger: TAGCAAGGAGCAAATAACCCAAAAGGGGTGAAGAGA...ACCCAAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATTTGGAGACATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR TCA 90 bp	CCAAATTTCCCCAGTAGAGGGGTTAACCAGGAATCCACTGTGCTTTATACAAATGATCCTCCAGCATTCTaGAGATACAGAGGCAAGGGA	+
Preference number: 2 (lower is better) Translates to: PNFPSRGVNQESTVLYTNDPPAF*RYRGKG Trigger: TCCCTTGCCTCTGTATCTTCAGAATGCTGGAGGATC...ATTTGTATAAAGCACAGTGGATTCCTGGTTAACCCCTCTACTGGGGAAATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	TGGATACCATACCGTTCATGTACTAACTTGTACATTAGAAAGCCTCCTGGAAGGGATCCTCCAGCATTCTaGAGATACAGAGGCAAGGGA	+
Preference number: 2 (lower is better) Translates to: WIPYRSCTNLYIRKPPGRDPPAF*RYRGKG Trigger: TCCCTTGCCTCTGTATCTTCAGAATGCTGGAGGATC...CCTTCCAGGAGGCTTTCTAATGTACAAGTTAGTACATGAACGGTATGGTATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR GCA 90 bp	CTGATGTCTCCAAATGCCTCACAAGTAATGCAGGGATCAGGGACATCCTTGGGTACCAGGAATCCACTGTaGTTTATACAAATCCTACTG	+
Preference number: 2 (lower is better) Translates to: LMSPNASQVMQGSGTSLGTRNPL*FIQILL Trigger: CAGTAGGATTTGTATAAAGCACAGTGGATTCCTGGT...ACCCAAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATTTGGAGACATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR GCA 90 bp	ACTGAAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGGGGGAACTTCAGTGACCTATTCTTaGTCCAGGTGGTCATGTTTG	+
Preference number: 2 (lower is better) Translates to: TEDVQCSQFTTPHTHGGTSVTYS*SRWSCL Trigger: CAAACATGACCACCTGGAGCAAGAATAGGTCACTGA...AGTTCCCCCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	CCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTTGTCATCAATTCATCAGAATTGGCATGCATaGCTTTCACCTAACTTTCGT	+
Preference number: 2 (lower is better) Translates to: PSYFPLHISNATKLSSIHQNWHA*LSPNFR Trigger: ACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTG...ATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	AGATCCTCCAGCATTCTGAAGATACAGAGGCAAGGGACACTTAGGTTTTTCGCTTGGAGTAGCACACTTTaGAGTTCTGGAAAAGTCACT	+
Preference number: 2 (lower is better) Translates to: RSSSILKIQRQGTLRFFAWSSTL*SSGKVT Trigger: AGTGACTTTTCCAGAACTTCAAAGTGTGCTACTCCA...AGCGAAAAACCTAAGTGTCCCTTGCCTCTGTATCTTCAGAATGCTGGAGGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	CACACACACACACACACACACACACACACACACACACAAATGAACCCCACACTCCCCAAACTAATCAATTaGTTGATTCCAAATTTCCCC	+
Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTQMNPTLPKLIN*LIPNFP Trigger: GGGGAAATTTGGAATCAATCAATTGATTAGTTTGGG...GAGTGTGGGGTTCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	ACTGAAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGGGGGAACTGTGTGGATTTCTTGCTaGGACCAACAAAGTAGCATA	+
Preference number: 2 (lower is better) Translates to: TEDVQCSQFTTPHTHGGTVWISC*DQQSSI Trigger: TATGCTACTTTGTTGGTCTCAGCAAGAAATCCACAC...AGTTCCCCCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR GCA 90 bp	GCTGGAGGATCTGGCCCAGAGGTTAAAAATAGATCTCCTACCACAATTTCTATCCCTGCACATCAGCAATaGCACCAAGTTGTCATCAAT	+
Preference number: 2 (lower is better) Translates to: AGGSGPEVKNRSPTTISIPAHQQ*HQVVIN Trigger: ATTGATGACAACTTGGTGGCATTGCTGATGTGCAGG...GATAGAAATTGTGGTAGGAGATCTATTTTTAACCTCTGGGCCAGATCCTCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR-3UTR GCA 90 bp	ACTGAAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGGGGGAACTCAATGCATATGGTACTaGCAAGCAGTGACATTGACA	+
Preference number: 2 (lower is better) Translates to: TEDVQCSQFTTPHTHGGTQCIWY*QAVTLT Trigger: TGTCAATGTCACTGCTTGGCAGTACCATATGCATTG...AGTTCCCCCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	AGGGTGCAACATGACCCTGGGAAAGAATTTGCAGGAGCCTCACAAAGGACAATAAATCAAACACAGAATTaGCATGCATGGCTTTCACCT	+
Preference number: 2 (lower is better) Translates to: RVQHDPGKEFAGASQRTINQTQN*HAWLSP Trigger: AGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATT...TATTGTCCTTTGTGAGGCTCCTGCAAATTCTTTCCCAGGGTCATGTTGCACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 90 bp	AAGCACAAAAAGTCAGTGACCTATTCTTGCTCCAGGTGGTCATGTTaGAAAGAAGAGGAAATCCTTCAGGATTCACGTAACAGTGAGTGG	+
Preference number: 2 (lower is better) Translates to: KHKKSVTYSCSRWSC*KEEEILQDSRNSEW Trigger: CCACTCACTGTTACGTGAATCCTGAAGGATTTCCTCTTCTTTCAAACATGACCACCTGGAGCAAGAATAGGTCACTGACTTTTTGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR TCA 90 bp	ATACAAATCCTACTGAAATTTGGGCAGTTTTCCCCCTATATTCTACCTCATATCGTGAGACCAAGGATCTaGCTTGCCACTCTCCTGAGA	+
Preference number: 2 (lower is better) Translates to: IQILLKFGQFSPYILPHIVRPRI*LATLLR Trigger: TCTCAGGAGAGTGGCAAGTCAGATCCTTGGTCTCAC...GATATGAGGTAGAATATAGGGGGAAAACTGCCCAAATTTCAGTAGGATTTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	AGGGTGCAACATGACCCTGGGAAAGAATTTGCAGGAGCCTCACAAAGGACAATAATAATTAAGGACATCTaGAATTTATCAAGGGGGCTC	+
Preference number: 2 (lower is better) Translates to: RVQHDPGKEFAGASQRTIIIKDI*NLSRGL Trigger: GAGCCCCCTTGATAAATTTCAGATGTCCTTAATTAT...TATTGTCCTTTGTGAGGCTCCTGCAAATTCTTTCCCAGGGTCATGTTGCACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR TCA 90 bp	TTGGGAGCAGATGATGAGATCTTAATCCTCTTTCCAGCTAGAAAATGCTATAATGTGGCAAATGCTTGCTaGCCATGCACGCTGAACTTG	+
Preference number: 2 (lower is better) Translates to: LGADDEILILFPARKCYNVANAC*PCTLNL Trigger: CAAGTTCAGCGTGCATGGTCAGCAAGCATTTGCCAC...ATTATAGCATTTTCTAGCTGGAAAGAGGATTAAGATCTCATCATCTGCTCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR GCA 90 bp	ACTGAAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGGGGGAACTACTTCTAATTTTCTGTaGTCTGGAAATCACTCCCCT	+
Preference number: 2 (lower is better) Translates to: TEDVQCSQFTTPHTHGGTTSNFL*SGNHSP Trigger: AGGGGAGTGATTTCCAGAGCACAGAAAATTAGAAGT...AGTTCCCCCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	CTGATGTCTCCAAATGCCTCACAAGTAATGCAGGGATCAGGGACATCCTTGGGTTTGTCTTGGCTATTATaGGCTATGAATACAGAGAAA	+
Preference number: 2 (lower is better) Translates to: LMSPNASQVMQGSGTSLGLSWLL*AMNTEK Trigger: TTTCTCTGTATTCATAGCCCATAATAGCCAAGACAA...ACCCAAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATTTGGAGACATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	ACTGAAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGGGGGAACTTTGATTATCTTTCTCTaGCTTGGCTCACTGCCATAT	+
Preference number: 2 (lower is better) Translates to: TEDVQCSQFTTPHTHGGTLIIFL*LGSLPY Trigger: ATATGGCAGTGAGCCAAGCCAGAGAAAGATAATCAA...AGTTCCCCCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	ACTGAAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGGGGGAACTTATTCTTGCTCCAGGTaGTCATGTTTGAAAGAAGAG	+
Preference number: 2 (lower is better) Translates to: TEDVQCSQFTTPHTHGGTYSCSR*SCLKEE Trigger: CTCTTCTTTCAAACATGACCACCTGGAGCAAGAATA...AGTTCCCCCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 90 bp	ACATTCCAGTCCAAGAGAGAACAGCAAACCAAAGAAGAGAGTGTCTaGTTGAAACACTGCCTTTGTATCACTCAAAGCACTAAGAGTGTG	+
Preference number: 2 (lower is better) Translates to: TFQSKREQQTKEESV*LKHCLCITQSTKSV Trigger: CACACTCTTAGTGCTTTGAGTGATACAAAGGCAGTGTTTCAACAAGACACTCTCTTCTTTGGTTTGCTGTTCTCTCTTGGACTGGAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR TCA 90 bp	TATATTCTACCTCATATCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATGATTAAGAGCAAAGAGTaGGACCAAGGATCTGACTTG	+
Preference number: 2 (lower is better) Translates to: YILPHIFQTALYHSPKHMIKSKE*DQGSDL Trigger: CAAGTCAGATCCTTGGTCTCACTCTTTGCTCTTAAT...CATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGATATGAGGTAGAATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR GCA 90 bp	TCACAAAATGGCAGACAAAAAGAAGAAGCACAACGTGTTCTGTACAATGCTTGCGAAAATAGTGGCAAATaGTTGCTGACCATGCACGCT	+
Preference number: 2 (lower is better) Translates to: SQNGRQKEEAQRVLYNACENSGK*LLTMHA Trigger: AGCGTGCATGGTCAGCAAGCATTTGCCACTATTTTC...GCAAGCATTGTACAGAACACGTTGTGCTTCTTCTTTTTGTCTGCCATTTTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR GCA 90 bp	TCACAAAATGGCAGACAAAAAGAAGAAGCACAACGTGTTCTGTACAATGCTTGCCCAGGAAAGCCTTGCTaGAAAGAAACCTACACATAC	+
Preference number: 2 (lower is better) Translates to: SQNGRQKEEAQRVLYNACPGKPC*KETYTY Trigger: GTATGTGTAGGTTTCTTTGCAGCAAGGCTTTCCTGG...GCAAGCATTGTACAGAACACGTTGTGCTTCTTCTTTTTGTCTGCCATTTTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR GCA 90 bp	AAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTGAAGATGTATGGAAAAATGGGCAATaGATATGGTACTGCCAAGCA	+
Preference number: 2 (lower is better) Translates to: KRLQEQLFGCPVLNTEDVWKNGQ*IWYCQA Trigger: TGCTTGGCAGTACCATATGCATTGCCCATTTTTCCA...TACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	AACAGTCAGGAGGTAGGAACAAGCAACATATTCTTTGTGTGTGTGTGTGTGTGTTCTGAACAAATTGAGTaGGGAAAATACAAAGGCCCC	+
Preference number: 2 (lower is better) Translates to: NSQEVGTSNIFFVCVCVCSEQIE*GKYKGP Trigger: GGGGCCTTTGTATTTTCCCCACTCAATTTGTTCAGA...ACACACACACACACACACAAAGAATATGTTGCTTGTTCCTACCTCCTGACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR-3UTR CCA 90 bp	TACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATACCGTTCATGTACTAACAGCCCTAAGCACATaGTGTCACATCAAAAGTCGC	+
Preference number: 2 (lower is better) Translates to: YKAFNRTELDGYHTVHVLTALST*CHIKSR Trigger: GCGACTTTTGATGTGACACCATGTGCTTAGGGCTGT...TAGTACATGAACGGTATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR CCA 90 bp	GCTGGAGGATCTGGCCCAGAGGTTAAAAATAGATCTCCTACCACAATTTCTATCTCATTCTACTTAGAATaGAGGGACAACTGCATGTCA	+
Preference number: 2 (lower is better) Translates to: AGGSGPEVKNRSPTTISISFYLE*RDNCMS Trigger: TGACATGCAGTTGTCCCTCCATTCTAAGTAGAATGA...GATAGAAATTGTGGTAGGAGATCTATTTTTAACCTCTGGGCCAGATCCTCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR-3UTR CCA 90 bp	AAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTGAAGATGTATTCAATTCTGTAATCTaGCAGCCAAAGACACTCCCA	+
Preference number: 2 (lower is better) Translates to: KRLQEQLFGCPVLNTEDVFNSVI*QPKTLP Trigger: TGGGAGTGTCTTTGGCTGCCAGATTACAGAATTGAA...TACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 90 bp	TTCCAGTCCAAGAGAGAACAGCAAACCAAAGAAGAGAGTGTCTTGTaGAAACACTGCCTTTGTATCACTCAAAGCACTAAGAGTGTGTTA	+
Preference number: 2 (lower is better) Translates to: FQSKREQQTKEESVL*KHCLCITQSTKSVL Trigger: TAACACACTCTTAGTGCTTTGAGTGATACAAAGGCAGTGTTTCAACAAGACACTCTCTTCTTTGGTTTGCTGTTCTCTCTTGGACTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR TCA 90 bp	AGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTGGCATGCATCTCAACAGCCAGGATaGATGCTAGACAATACACTG	+
Preference number: 2 (lower is better) Translates to: RSEGNLPISSNQTQNWHASQQPG*MLDNTL Trigger: CAGTGTATTGTCTAGCATTCATCCTGGCTGTTGAGA...TGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	TCGTCAAATCAAACACAGAATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTGAAGGATCATGTATGTaGCATCATGTACCCCAAACT	+
Preference number: 2 (lower is better) Translates to: SSNQTQNWHAWLSPNFRCEGSCM*HHVPQT Trigger: AGTTTGGGGTACATGATGTCACATACATGATCCTTC...ACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 90 bp	CCCACTCTTTCAGTAGAATCTCCATGTCTCATCTTAAATGAATACTaGGGACAACATGGGATTTGCTCAAAGAACAACATAGAGTGTGCT	+
Preference number: 2 (lower is better) Translates to: PTLSVESPCLILNEY*GQHGICSKNNIECA Trigger: AGCACACTCTATGTTGTTCTTTGAGCAAATCCCATGTTGTCCCAAGTATTCATTTAAGATGAGACATGGAGATTCTACTGAAAGAGTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR CAA 90 bp	GTCTCTCTAATCAAAAAGAAAGCACAAAAAGTCAGTGACCTATTCTaGCTCCAGGTGGTCATGTTTGAAAGAAGAGGAAATCCTTCAGGA	+
Preference number: 2 (lower is better) Translates to: VSLIKKKAQKVSDLF*LQVVMFERRGNPSG Trigger: TCCTGAAGGATTTCCTCTTCTTTCAAACATGACCACCTGGAGCAAGAATAGGTCACTGACTTTTTGTGCTTTCTTTTTGATTAGAGAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 90 bp	GTTATAACAGAGAGCTTAATGAATAGCGTTAAAAGTTTAAACAAATaGTTCCTGCCCACCCCCATCTCCACTAAGCCCAACCAAATGACA	+
Preference number: 2 (lower is better) Translates to: VITESLMNSVKSLNK*FLPTPISTKPNQMT Trigger: TGTCATTTGGTTGGGCTTAGTGGAGATGGGGGTGGGCAGGAACAATTTGTTTAAACTTTTAACGCTATTCATTAAGCTCTCTGTTATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 90 bp	ATGTCTCCAAATGCCTCACAAGTAATGCAGGGATCAGGGACATCCTaGGGTTGTATGATTCTAAGAATTTTTCAATTCTGTAATCTGGCA	+
Preference number: 2 (lower is better) Translates to: MSPNASQVMQGSGTS*GCMILRIFQFCNLA Trigger: TGCCAGATTACAGAATTGAAAAATTCTTAGAATCATACAACCCAAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATTTGGAGACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR TCA 90 bp	TACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATACCGTTCATGTACTAATTAAGAGCAAAGAGTaGGACCAAGGATCTGACTTG	+
Preference number: 2 (lower is better) Translates to: YKAFNRTELDGYHTVHVLIKSKE*DQGSDL Trigger: CAAGTCAGATCCTTGGTCTCACTCTTTGCTCTTAAT...TAGTACATGAACGGTATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	ATACAAATCCTACTGAAATTTGGGCAGTTTTCCCCCTATATTCTACCTCATATCTCTCAACAGCCAGGATaGATGCTAGACAATACACTG	+
Preference number: 2 (lower is better) Translates to: IQILLKFGQFSPYILPHISQQPG*MLDNTL Trigger: CAGTGTATTGTCTAGCATTCATCCTGGCTGTTGAGA...GATATGAGGTAGAATATAGGGGGAAAACTGCCCAAATTTCAGTAGGATTTGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	AACAGTCAGGAGGTAGGAACAAGCAACATATTCTTTGTGTGTGTGTGTGTGTGTTTGGCAGTGAGAGCATaGTTTCTAAACTACAGTATT	+
Preference number: 2 (lower is better) Translates to: NSQEVGTSNIFFVCVCVCLAVRA*FLNYSI Trigger: AATACTGTAGTTTAGAAATCATGCTCTCACTGCCAA...ACACACACACACACACACAAAGAATATGTTGCTTGTTCCTACCTCCTGACTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	AAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTGAAGATGTAGATAAACACAAGACTTaGTTATCTTTCTCTGGCTTG	+
Preference number: 2 (lower is better) Translates to: KRLQEQLFGCPVLNTEDVDKHKT*LSFSGL Trigger: CAAGCCAGAGAAAGATAATCAAGTCTTGTGTTTATC...TACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR TCA 90 bp	TCACAAAATGGCAGACAAAAAGAAGAAGCACAACGTGTTCTGTACAATGCTTGCCTTCTCTGTTCTCTTTaGCCTTTTTCAACTCAACTG	+
Preference number: 2 (lower is better) Translates to: SQNGRQKEEAQRVLYNACLLCSL*PFSTQL Trigger: CAGTTGAGTTGAAAAAGGTCAAAGAGAACAGAGAAG...GCAAGCATTGTACAGAACACGTTGTGCTTCTTCTTTTTGTCTGCCATTTTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	AGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTGGCATGCATCTGAACAAATTGAGTaGGGAAAATACAAAGGCCCC	+
Preference number: 2 (lower is better) Translates to: RSEGNLPISSNQTQNWHASEQIE*GKYKGP Trigger: GGGGCCTTTGTATTTTCCCCACTCAATTTGTTCAGA...TGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 90 bp	AGTTTATGCAAATCAAGCATTGAGTCATTTGCCTTCAACTTAGGCTaGATGATTCTAGGACATGGAAGCTACCTACCCACTTTACAATTC	+
Preference number: 2 (lower is better) Translates to: SLCKSSIESFAFNLG*MILGHGSYLPTLQF Trigger: GAATTGTAAAGTGGGTAGGTAGCTTCCATGTCCTAGAATCATCAAGCCTAAGTTGAAGGCAAATGACTCAATGCTTGATTTGCATAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 90 bp	TCCAAAAGAGGAGGAAGTACCTCACAAGTCAAAGAATGGATGTTTTaGCTACCGAATGAGAGACTGATAACTGAGAACAAATATAGGCAT	+
Preference number: 2 (lower is better) Translates to: SKRGGSTSQVKEWMF*LPNERLITENKYRH Trigger: ATGCCTATATTTGTTCTCAGTTATCAGTCTCTCATTCGGTAGCAAAAACATCCATTCTTTGACTTGTGAGGTACTTCCTCCTCTTTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 90 bp	TGCTCATTATTGATACATGGACAGGCAGTCCTGGATCGTGAACAGTaGGTGTTAAAAGGAAAATGTTTAGGTAAATCTAGTATCGTAAGG	+
Preference number: 2 (lower is better) Translates to: CSLLIHGQAVLDREQ*VLKGKCLGKSSIVR Trigger: CCTTACGATACTAGATTTACCTAAACATTTTCCTTTTAACACCAACTGTTCACGATCCAGGACTGCCTGTCCATGTATCAATAATGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR TCA 90 bp	CTTTCGTTGTCTTGGCTATTATGGGCTATGAATACAGAGAAAAAGCAATGTTATTCTCAACAGCCAGGATaGATGCTAGACAATACACTG	+
Preference number: 2 (lower is better) Translates to: LSLSWLLWAMNTEKKQCYSQQPG*MLDNTL Trigger: CAGTGTATTGTCTAGCATTCATCCTGGCTGTTGAGA...ATAACATTGCTTTTTCTCTGTATTCATAGCCCATAATAGCCAAGACAACGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	AGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTGGCATGCAAAAAGGTGTCAGACCTaGAAACAAATTCTCACAGTG	+
Preference number: 2 (lower is better) Translates to: RSEGNLPISSNQTQNWHAKRCQT*KQILTV Trigger: CACTGTGAGAATTTGTTTTCAGGTCTGACACCTTTT...TGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	TCGTCAAATCAAACACAGAATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTTTGGCAGTGAGAGCATaGTTTCTAAACTACAGTATT	+
Preference number: 2 (lower is better) Translates to: SSNQTQNWHAWLSPNFRCLAVRA*FLNYSI Trigger: AATACTGTAGTTTAGAAATCATGCTCTCACTGCCAA...ACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR GCA 90 bp	TACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATACCGTTCATGTACTAACCAGGAATCCACTGTaGTTTATACAAATCCTACTG	+
Preference number: 2 (lower is better) Translates to: YKAFNRTELDGYHTVHVLTRNPL*FIQILL Trigger: CAGTAGGATTTGTATAAAGCACAGTGGATTCCTGGT...TAGTACATGAACGGTATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	CTGAACAATTACAAAGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACTGGAGTAGCACACTTTaGAGTTCTGGAAAAGTCACT	+
Preference number: 2 (lower is better) Translates to: LNNYKEVKEIFLSRQIKHWSSTL*SSGKVT Trigger: AGTGACTTTTCCAGAACTTCAAAGTGTGCTACTCCA...GTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCTTTGTAATTGTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	TACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATACCGTTCATGTACTACCCAAACTAATCAATTaGTTGATTCCAAATTTCCCC	+
Preference number: 2 (lower is better) Translates to: YKAFNRTELDGYHTVHVLPKLIN*LIPNFP Trigger: GGGGAAATTTGGAATCAATCAATTGATTAGTTTGGG...TAGTACATGAACGGTATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	TTAAGAAATACTTCACTTCCCAATGATAGCCAATCTCACACCAGTTTGGCCAAAGAAGAGTTTTGCTCCTaGAATACAGAGTTGAGTTTT	+
Preference number: 2 (lower is better) Translates to: LRNTSLPNDSQSHTSLAKEEFCS*NTELSF Trigger: AAAACTCAACTCTGTATTTCAGGAGCAAAACTCTTC...TTTGGCCAAACTGGTGTGAGATTGGCTATCATTGGGAAGTGAAGTATTTCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR GCA 90 bp	TTAAGAAATACTTCACTTCCCAATGATAGCCAATCTCACACCAGTTTGGCCAAACTGTTGAAATTTCTTTaGTCCCACTCTTTCAGTAGA	+
Preference number: 2 (lower is better) Translates to: LRNTSLPNDSQSHTSLAKLLKFL*SHSFSR Trigger: TCTACTGAAAGAGTGGGAGCAAAGAAATTTCAACAG...TTTGGCCAAACTGGTGTGAGATTGGCTATCATTGGGAAGTGAAGTATTTCTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CCA 90 bp	TTGGGAGCAGATGATGAGATCTTAATCCTCTTTCCAGCTAGAAAATGCTATAATATACTTGGGACAACATaGGATTTGCTCAAAGAACAA	+
Preference number: 2 (lower is better) Translates to: LGADDEILILFPARKCYNILGTT*DLLKEQ Trigger: TTGTTCTTTGAGCAAATCCCATGTTGTCCCAAGTAT...ATTATAGCATTTTCTAGCTGGAAAGAGGATTAAGATCTCATCATCTGCTCCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR TCA 90 bp	CTGAACAATTACAAAGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACCCCAAACTAATCAATTaGTTGATTCCAAATTTCCCC	+
Preference number: 2 (lower is better) Translates to: LNNYKEVKEIFLSRQIKHPKLIN*LIPNFP Trigger: GGGGAAATTTGGAATCAATCAATTGATTAGTTTGGG...GTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCTTTGTAATTGTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR TCA 90 bp	CTGAACAATTACAAAGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACGAAGAGTTTTGCTCCTaGAATACAGAGTTGAGTTTT	+
Preference number: 2 (lower is better) Translates to: LNNYKEVKEIFLSRQIKHEEFCS*NTELSF Trigger: AAAACTCAACTCTGTATTTCAGGAGCAAAACTCTTC...GTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCTTTGTAATTGTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR GCA 72 bp	GGTAGGGCAGCAACCCTCTGGTGCTCAACGTCTCAATaGCTCCCTCTCCTTGGAACTGTCTGCAGGCCATGT	+
Preference number: 3 (lower is better) Translates to: GRAATLWCSTSQ*LPLLGTVCRPC Trigger: ACATGGCCTGCAGACAGTTCCAAGGAGAGGGAGGCATTGAGACGTTGAGCACCAGAGGGTTGCTGCCCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	TTGCTAAGTATGAAGCAGCCTAGGCGTGCTTGCGCATaGGCGCGCGAGCACACACACACACACACACACACA	+
Preference number: 3 (lower is better) Translates to: LLSMKQPRRACA*AREHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGCTCGCGCGCGCATGCGCAAGCACGCCTAGGCTGCTTCATACTTAGCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR GCA 72 bp	TGGAAGATTCCTCAAGGTAGGGCAGCAACCCTCTGGTaGTCAACGTCTCAATGCCTCCCTCTCCTTGGAACT	+
Preference number: 3 (lower is better) Translates to: WKIPQGRAATLW*STSQCLPLLGT Trigger: AGTTCCAAGGAGAGGGAGGCATTGAGACGTTGAGCACCAGAGGGTTGCTGCCCTACCTTGAGGAATCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 72 bp	ATTTGGAAGATTCCTCAAGGTAGGGCAGCAACCCTCTaGTGCTCAACGTCTCAATGCCTCCCTCTCCTTGGA	+
Preference number: 3 (lower is better) Translates to: IWKIPQGRAATL*CSTSQCLPLLG Trigger: TCCAAGGAGAGGGAGGCATTGAGACGTTGAGCACCAGAGGGTTGCTGCCCTACCTTGAGGAATCTTCCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 72 bp	ACATTCTCACCATCACAGAAGCTCATTGGGGACCCATaGGTGTGTGATCGCTCCCATTCTAAGGAGATAGGG	+
Preference number: 3 (lower is better) Translates to: TFSPSQKLIGDP*VCDRSHSKEIG Trigger: CCCTATCTCCTTAGAATGGGAGCGATCACACACCCATGGGTCCCCAATGAGCTTCTGTGATGGTGAGAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CAA 90 bp	GTGCAGTATTTGCTAAGTATGAAGCAGCCTAGGCGTGCTTGCGCATGCGCGCGCCTAACTTTCGTTGTCTaGGCTATTATGGGCTATGAA	+
Preference number: 3 (lower is better) Translates to: VQYLLSMKQPRRACACARLTFVV*AIMGYE Trigger: TTCATAGCCCATAATAGCCAAGACAACGAAAGTTAG...GCGCGCGCATGCGCAAGCACGCCTAGGCTGCTTCATACTTAGCAAATACTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CCA 72 bp	TCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATaGTGTCACATCAAAAGTCGCTGGTGTTTCTCCATC	+
Preference number: 3 (lower is better) Translates to: SFRQPYTTALST*CHIKSRWCFSI Trigger: GATGGAGAAACACCAGCGACTTTTGATGTGACACCATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR TCA 72 bp	GCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTaGAGATGTACAGTGTTCACAGTTCACAACACCTCA	+
Preference number: 3 (lower is better) Translates to: ARAALWLPSIEH*RCTVFTVHNTS Trigger: TGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	TATAAAGGGCCTGCTCTAACCAGTTTACATGGGCCTTaGCAAACATTCCAGTCCAAGAGAGAACAGCAAACC	+
Preference number: 3 (lower is better) Translates to: YKGPALTSLHGP*QTFQSKREQQT Trigger: GGTTTGCTGTTCTCTCTTGGACTGGAATGTTTGGCAAGGCCCATGTAAACTGGTTAGAGCAGGCCCTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CAA 90 bp	CACACACACACACACACACACACACACACACACACACAAATGAACCCCACACTCACAGTGTTTGTAGTGTaGGTTGTTTACAAGGCATTC	+
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTHTQMNPTLTVFVV*VVYKAF Trigger: GAATGCCTTGTAAACAACCAACACTACAAACACTGT...GAGTGTGGGGTTCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR CAA 90 bp	CCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTTGTCATCAATTCATTGTCTTGTGCAGTATTaGCTAAGTATGAAGCAGCCT	+
Preference number: 3 (lower is better) Translates to: PSYFPLHISNATKLSSIHCLVQY*LSMKQP Trigger: AGGCTGCTTCATACTTAGCAAATACTGCACAAGACA...ATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR CAA 90 bp	CTGATGTCTCCAAATGCCTCACAAGTAATGCAGGGATCAGGGACATCCTTGGGTAAAGAATGGATGTTTTaGCTACCGAATGAGAGACTG	+
Preference number: 3 (lower is better) Translates to: LMSPNASQVMQGSGTSLGKEWMF*LPNERL Trigger: CAGTCTCTCATTCGGTAGCAAAAACATCCATTCTTT...ACCCAAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATTTGGAGACATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 72 bp	AAAGTCGCTGGTGTTTCTCCATCTCAACAGCCAGGATaGATGCTAGACAATACACTGGGGGCTCAATTAAGA	+
Preference number: 3 (lower is better) Translates to: KVAGVSPSQQPG*MLDNTLGAQLR Trigger: TCTTAATTGAGCCCCCAGTGTATTGTCTAGCATTCATCCTGGCTGTTGAGATGGAGAAACACCAGCGACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR TCA 72 bp	CAACATATTCTTTGTGTGTGTGTGTGTGTGTGTGTGTaGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	+
Preference number: 3 (lower is better) Translates to: QHILCVCVCVCV*ERERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAAAGAATATGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR GCA 72 bp	CAATTAAGAGCAAAGAGTGAGACCAAGGATCTGACTTaGCACTCTCCTGAGATCCTCCAGCATTCTGAAGAT	+
Preference number: 3 (lower is better) Translates to: QLRAKSETKDLT*HSPEILQHSED Trigger: ATCTTCAGAATGCTGGAGGATCTCAGGAGAGTGGCAAGTCAGATCCTTGGTCTCACTCTTTGCTCTTAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR CAA 90 bp	CCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTTGTCATCAATTCATACAGTGTTTGTAGTGTaGGTTGTTTACAAGGCATTC	+
Preference number: 3 (lower is better) Translates to: PSYFPLHISNATKLSSIHTVFVV*VVYKAF Trigger: GAATGCCTTGTAAACAACCAACACTACAAACACTGT...ATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR CAA 90 bp	CCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTTGTCATCAATTCATCCTGATTCTATTGAATaGGCCTCTAGTCATTGTGTT	+
Preference number: 3 (lower is better) Translates to: PSYFPLHISNATKLSSIHPDSIE*ASSHCV Trigger: AACACAATGACTAGAGGCCAATTCAATAGAATCAGG...ATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR-3UTR CAA 90 bp	TTTGCCCCTATTTCTATTTCTGTGGGGAAGAACAGTCAGGAGGTAGGAACAAGCGGGACAACATGGGATTaGCTCAAAGAACAACATAGA	+
Preference number: 3 (lower is better) Translates to: FAPISISVGKNSQEVGTSGTTWD*LKEQHR Trigger: TCTATGTTGTTCTTTGAGCAAATCCCATGTTGTCCC...GCTTGTTCCTACCTCCTGACTGTTCTTCCCCACAGAAATAGAAATAGGGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR-3UTR CAA 90 bp	ACTGAAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGGGGGAACTAAAAGTTTAAACAAATaGTTCCTGCCCACCCCCATC	+
Preference number: 3 (lower is better) Translates to: TEDVQCSQFTTPHTHGGTKSLNK*FLPTPI Trigger: GATGGGGGTGGGCAGGAACAATTTGTTTAAACTTTT...AGTTCCCCCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CAA 90 bp	ACTGAAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGGGGGAACTTGGGTTATTTGCTCCTaGCTAACTTTACTTGGCAGA	+
Preference number: 3 (lower is better) Translates to: TEDVQCSQFTTPHTHGGTWVICS*LTLLGR Trigger: TCTGCCAAGTAAAGTTAGCAAGGAGCAAATAACCCA...AGTTCCCCCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 72 bp	ACCTCACACACATGGGGGAACTTCTCTAGACATCCTTaGAGTCCTCAAACCAAACAGCCCTCATCAAATTAT	+
Preference number: 3 (lower is better) Translates to: TSHTWGNFSRHP*SPQTKQPSSNY Trigger: ATAATTTGATGAGGGCTGTTTGGTTTGAGGACTTCAAGGATGTCTAGAGAAGTTCCCCCATGTGTGTGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	CCTTGCTGCAAAGAAACCTACACATACAGATCATGTTaGCCTAACTTCTGTCATGGAAAGCACAGAAACAGG	+
Preference number: 3 (lower is better) Translates to: PCCKETYTYRSC*PNFCHGKHRNR Trigger: CCTGTTTCTGTGCTTTCCATGACAGAAGTTAGGGCAACATGATCTGTATGTGTAGGTTTCTTTGCAGCAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 72 bp	TGTGAGAGGAAATGGGGAAATCTCTATGTAGACTATTaGAGAGACTGGGCATGGGGACACAAGTTTATGCAA	+
Preference number: 3 (lower is better) Translates to: CERKWGNLYVDY*RDWAWGHKFMQ Trigger: TTGCATAAACTTGTGTCCCCATGCCCAGTCTCTCCAATAGTCTACATAGAGATTTCCCCATTTCCTCTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CAA 90 bp	TTTGCCCCTATTTCTATTTCTGTGGGGAAGAACAGTCAGGAGGTAGGAACAAGCCTAACTTTCGTTGTCTaGGCTATTATGGGCTATGAA	+
Preference number: 3 (lower is better) Translates to: FAPISISVGKNSQEVGTSLTFVV*AIMGYE Trigger: TTCATAGCCCATAATAGCCAAGACAACGAAAGTTAG...GCTTGTTCCTACCTCCTGACTGTTCTTCCCCACAGAAATAGAAATAGGGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR-3UTR CAA 90 bp	GCTGGAGGATCTGGCCCAGAGGTTAAAAATAGATCTCCTACCACAATTTCTATCCAAAACCTCATGATTTaGGGCTCTTCAATGAGCAGT	+
Preference number: 3 (lower is better) Translates to: AGGSGPEVKNRSPTTISIQNLMI*GSSMSS Trigger: ACTGCTCATTGAAGAGCCCAAAATCATGAGGTTTTG...GATAGAAATTGTGGTAGGAGATCTATTTTTAACCTCTGGGCCAGATCCTCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR TCA 72 bp	CCTAAACGTCTTAATATAATGAAGGCAATATATAACTaGGGCCTAGGTATGGGTCCAAATGGCCCCATGTGC	+
Preference number: 3 (lower is better) Translates to: PKRLNIMKAIYN*GLGMGPNGPMC Trigger: GCACATGGGGCCATTTGGACCCATACCTAGGCCTCAGTTATATATTGCCTTCATTATATTAAGACGTTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 72 bp	AAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTaGACACTGAAGATGTACAGTGTTCACAGTTCACAA	+
Preference number: 3 (lower is better) Translates to: KDCKSSSLAAQY*TLKMYSVHSSQ Trigger: TTGTGAACTGTGAACACTGTACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 72 bp	TGGGCATGGGGACACAAGTTTATGCAAATCAAGCATTaGGTCATTTGCCTTCAACTTAGGCTTGATGATTCT	+
Preference number: 3 (lower is better) Translates to: WAWGHKFMQIKH*VICLQLRLDDS Trigger: AGAATCATCAAGCCTAAGTTGAAGGCAAATGACTCAATGCTTGATTTGCATAAACTTGTGTCCCCATGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 72 bp	AGCTCCACATTAATCAACACTAAGAAGCCCTTGGTGTaGTGGCTAATGAAACTTCATTTATGCATCCAAGGG	+
Preference number: 3 (lower is better) Translates to: SSTLINTKKPLV*WLMKLHLCIQG Trigger: CCCTTGGATGCATAAATGAAGTTTCATTAGCCATCACACCAAGGGCTTCTTAGTGTTGATTAATGTGGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	ATTTCCCCAGTAGAGGGGTTAACCAGGAATCCACTGTaGTTTATACAAATCCTACTGAAATTTGGGCAGTTT	+
Preference number: 3 (lower is better) Translates to: ISPVEGLTRNPL*FIQILLKFGQF Trigger: AAACTGCCCAAATTTCAGTAGGATTTGTATAAAGCACAGTGGATTCCTGGTTAACCCCTCTACTGGGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR GCA 72 bp	ACTATTGGAGAGACTGGGCATGGGGACACAAGTTTATaGAAATCAAGCATTGAGTCATTTGCCTTCAACTTA	+
Preference number: 3 (lower is better) Translates to: TIGETGHGDTSL*KSSIESFAFNL Trigger: TAAGTTGAAGGCAAATGACTCAATGCTTGATTTGCATAAACTTGTGTCCCCATGCCCAGTCTCTCCAATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 72 bp	AAGCACAAAAAGTCAGTGACCTATTCTTGCTCCAGGTaGTCATGTTTGAAAGAAGAGGAAATCCTTCAGGAT	+
Preference number: 3 (lower is better) Translates to: KHKKSVTYSCSR*SCLKEEEILQD Trigger: ATCCTGAAGGATTTCCTCTTCTTTCAAACATGACCACCTGGAGCAAGAATAGGTCACTGACTTTTTGTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CAA 90 bp	AACAGTCAGGAGGTAGGAACAAGCAACATATTCTTTGTGTGTGTGTGTGTGTGTCCTGATTCTATTGAATaGGCCTCTAGTCATTGTGTT	+
Preference number: 3 (lower is better) Translates to: NSQEVGTSNIFFVCVCVCPDSIE*ASSHCV Trigger: AACACAATGACTAGAGGCCAATTCAATAGAATCAGG...ACACACACACACACACACAAAGAATATGTTGCTTGTTCCTACCTCCTGACTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR-3UTR CAA 90 bp	AACAGTCAGGAGGTAGGAACAAGCAACATATTCTTTGTGTGTGTGTGTGTGTGTCCCCAAACTAATCAATaGATTGATTCCAAATTTCCC	+
Preference number: 3 (lower is better) Translates to: NSQEVGTSNIFFVCVCVCPQTNQ*IDSKFP Trigger: GGGAAATTTGGAATCAATCAATTGATTAGTTTGGGG...ACACACACACACACACACAAAGAATATGTTGCTTGTTCCTACCTCCTGACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR-3UTR CAA 90 bp	TCACAAAATGGCAGACAAAAAGAAGAAGCACAACGTGTTCTGTACAATGCTTGCTTCAGCAGCCAAACTTaGAATGCTGCATCTTTCAAA	+
Preference number: 3 (lower is better) Translates to: SQNGRQKEEAQRVLYNACFSSQT*NAASFK Trigger: TTTGAAAGATGCAGCATTCAAAGTTTGGCTGCTGAA...GCAAGCATTGTACAGAACACGTTGTGCTTCTTCTTTTTGTCTGCCATTTTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR-3UTR CAA 90 bp	AAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTGAAGATGTAACAGAAAGGACACTGTaGTTATACAAGAATGTCTGT	+
Preference number: 3 (lower is better) Translates to: KRLQEQLFGCPVLNTEDVTERTL*LYKNVC Trigger: ACAGACATTCTTGTATAACAACAGTGTCCTTTCTGT...TACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 72 bp	TCTGAATTAATTAGCAGACTTAAGACTGCTCATTATTaGTACATGGACAGGCAGTCCTGGATCGTGAACAGT	+
Preference number: 3 (lower is better) Translates to: SELISRLKTAHY*YMDRQSWIVNS Trigger: ACTGTTCACGATCCAGGACTGCCTGTCCATGTATCAATAATGAGCAGTCTTAAGTCTGCTAATTAATTCAGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 72 bp	AGAGAGAACAGCAAACCAAAGAAGAGAGTGTCTTGTTaGAACACTGCCTTTGTATCACTCAAAGCACTAAGA	+
Preference number: 3 (lower is better) Translates to: RENSKPKKRVSC*NTAFVSLKALR Trigger: TCTTAGTGCTTTGAGTGATACAAAGGCAGTGTTTCAACAAGACACTCTCTTCTTTGGTTTGCTGTTCTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	TTCAGTGAATATTCATTAGTTCCAGGAAAGCCTTGCTaGAAAGAAACCTACACATACAGATCATGTTGCCCT	+
Preference number: 3 (lower is better) Translates to: FSEYSLVPGKPC*KETYTYRSCCP Trigger: AGGGCAACATGATCTGTATGTGTAGGTTTCTTTGCAGCAAGGCTTTCCTGGAACTAATGAATATTCACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	ATAAATATTAGTCAGCAAATCTCTGATGTCTCCAAATaGCTCACAAGTAATGCAGGGATCAGGGACATCCTT	+
Preference number: 3 (lower is better) Translates to: INISQQISDVSK*LTSNAGIRDIL Trigger: AAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATTTGGAGACATCAGAGATTTGCTGACTAATATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	CAGCAAACCAAAGAAGAGAGTGTCTTGTTGAAACACTaGCTTTGTATCACTCAAAGCACTAAGAGTGTGTTA	+
Preference number: 3 (lower is better) Translates to: QQTKEESVLLKH*LCITQSTKSVL Trigger: TAACACACTCTTAGTGCTTTGAGTGATACAAAGGCAGTGTTTCAACAAGACACTCTCTTCTTTGGTTTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 72 bp	CCTATCTCGTCAAATCAAACACAGAATTGGCATGCATaGCTTTCACCTAACTTTCGTTGTCTTGGCTATTAT	+
Preference number: 3 (lower is better) Translates to: PISSNQTQNWHA*LSPNFRCLGYY Trigger: ATAATAGCCAAGACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGAGATAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CCA 72 bp	GGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTaGCATGCATGGCTTTCACCTAACTTTCGTTGTCTT	+
Preference number: 3 (lower is better) Translates to: GNLPISSNQTQN*HAWLSPNFRCL Trigger: AAGACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR TCA 72 bp	AAGCATTCAGTAGAAAGGTCATGGAGTAGCACACTTTaGAGTTCTGGAAAAGTCACTCAAAAGGATGGTTAT	+
Preference number: 3 (lower is better) Translates to: KHSVERSWSSTL*SSGKVTQKDGY Trigger: ATAACCATCCTTTTGAGTGACTTTTCCAGAACTTCAAAGTGTGCTACTCCATGACCTTTCTACTGAATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR TCA 72 bp	AACCAAATGACAGGAACAATTACCTGTGGTCTCTCATaGCATTATATTGCAGCTTTTCGAAGCTATGAGCAA	+
Preference number: 3 (lower is better) Translates to: NQMTGTITCGLS*HYIAAFRSYEQ Trigger: TTGCTCATAGCTTCGAAAAGCTGCAATATAATGTCATGAGAGACCACAGGTAATTGTTCCTGTCATTTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	GAATTCAGTGAATATTCATTAGTTCCAGGAAAGCCTTaGTGCAAAGAAACCTACACATACAGATCATGTTGC	+
Preference number: 3 (lower is better) Translates to: EFSEYSLVPGKP*CKETYTYRSCC Trigger: GCAACATGATCTGTATGTGTAGGTTTCTTTGCAGCAAGGCTTTCCTGGAACTAATGAATATTCACTGAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	TCAAAAAGAAAGCACAAAAAGTCAGTGACCTATTCTTaGTCCAGGTGGTCATGTTTGAAAGAAGAGGAAATC	+
Preference number: 3 (lower is better) Translates to: SKRKHKKSVTYS*SRWSCLKEEEI Trigger: GATTTCCTCTTCTTTCAAACATGACCACCTGGAGCAAGAATAGGTCACTGACTTTTTGTGCTTTCTTTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	GACTTCTCTGTTCTCTTTGACCTTTTTCAACTCAACTaGTCTTGTAATCCAAGTAGGAAAGTGCCTTACTTT	+
Preference number: 3 (lower is better) Translates to: DFSVLFDLFQLN*SCNPSRKVPYF Trigger: AAAGTAAGGCACTTTCCTACTTGGATTACAAGAGCAGTTGAGTTGAAAAAGGTCAAAGAGAACAGAGAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR GCA 72 bp	TGGAATGACAAAAAGCCATTTATTTCCTTGAGTTATTaGCCAAAATCGAGACATTCTGAAGCTTCGGGTCTT	+
Preference number: 3 (lower is better) Translates to: WNDKKPFISLSY*PKSRHSEASGL Trigger: AAGACCCGAAGCTTCAGAATGTCTCGATTTTGGGCAATAACTCAAGGAAATAAATGGCTTTTTGTCATTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 72 bp	CTGAAGCTTCGGGTCTTTGTTTTAGTTTACAAGACTTaGTCTTCTGACTTCTCTGTTCTCTTTGACCTTTTT	+
Preference number: 3 (lower is better) Translates to: LKLRVFVLVYKT*SSDFSVLFDLF Trigger: AAAAAGGTCAAAGAGAACAGAGAAGTCAGAAGACCAAGTCTTGTAAACTAAAACAAAGACCCGAAGCTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 72 bp	TGTACATTAGAAAGCCTCCTGGAAGGATCATGTATGTaGCATCATGTACCCCAAACTAATCAATTGATTGAT	+
Preference number: 3 (lower is better) Translates to: CTLESLLEGSCM*HHVPQTNQLID Trigger: ATCAATCAATTGATTAGTTTGGGGTACATGATGTCACATACATGATCCTTCCAGGAGGCTTTCTAATGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR GCA 72 bp	CAAAAAGAAGAAGCACAACGTGTTCTGTACAATGCTTaGTTAGAAGATAAAGACCTAAACATTCATGAGCTG	+
Preference number: 3 (lower is better) Translates to: QKEEAQRVLYNA*LEDKDLNIHEL Trigger: CAGCTCATGAATGTTTAGGTCTTTATCTTCTAAGCAAGCATTGTACAGAACACGTTGTGCTTCTTCTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CCA 72 bp	GAGAATATAATGTGTAAGGTCACTGTATGCTATTTTTaGTATAGATACAAATATTCAGTGTCAGCCAGGGCA	+
Preference number: 3 (lower is better) Translates to: ENIMCKVTVCYF*YRYKYSVSARA Trigger: TGCCCTGGCTGACACTGAATATTTGTATCTATACCAAAAATAGCATACAGTGACCTTACACATTATATTCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR TCA 72 bp	TTGGGTAAATTTAGTAAGAGATCTTCTAGAATTCAGTaGATATTCATTAGTTCCAGGAAAGCCTTGCTGCAA	+
Preference number: 3 (lower is better) Translates to: LGKFSKRSSRIQ*IFISSRKALLQ Trigger: TTGCAGCAAGGCTTTCCTGGAACTAATGAATATTCACTGAATTCTAGAAGATCTCTTACTAAATTTACCCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR TCA 90 bp	GTGCAGTATTTGCTAAGTATGAAGCAGCCTAGGCGTGCTTGCGCATGCGCGCGCTTGTTCTCTCTGGCTTaGGCACTGTTGCTGCTAGCC	+
Preference number: 4 (lower is better) Translates to: VQYLLSMKQPRRACACARLFSLA*ALLLLA Trigger: GGCTAGCAGCAACAGTGCTCAAGCCAGAGAGAACAA...GCGCGCGCATGCGCAAGCACGCCTAGGCTGCTTCATACTTAGCAAATACTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	GTGCAGTATTTGCTAAGTATGAAGCAGCCTAGGCGTGCTTGCGCATGCGCGCGCAGTCCTTGTTCTCTCTaGCTTGAGCACTGTTGCTGC	+
Preference number: 4 (lower is better) Translates to: VQYLLSMKQPRRACACARSPCSL*LEHCCC Trigger: GCAGCAACAGTGCTCAAGCCAGAGAGAACAAGGACT...GCGCGCGCATGCGCAAGCACGCCTAGGCTGCTTCATACTTAGCAAATACTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	CACACACACACACACACACACACACACACACACACACAAATGAACCCCACACTCCGTACACAATCCCCTTaGAGTAACGGTCCCCATTGC	+
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTQMNPTLRTQSP*SNGPHC Trigger: GCAATGGGGACCGTTACTTCAAGGGGATTGTGTACG...GAGTGTGGGGTTCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CCAAATTTCCCCAGTAGAGGGGTTAACCAGGAATCCACTGTGCTTTATACAAATGCGCACAGCCTTCCGTaGCTTCACCCCGCTGCGAAT	+
Preference number: 4 (lower is better) Translates to: PNFPSRGVNQESTVLYTNAHSLP*LHPAAN Trigger: ATTCGCAGCGGGGTGAAGCCACGGAAGGCTGTGCGC...ATTTGTATAAAGCACAGTGGATTCCTGGTTAACCCCTCTACTGGGGAAATTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CACACACACACACACACACACACACACACACACACACAAATGAACCCCACACTCGCCAGCTGCGGCAGATaGATTCCCTTTCATGACTCT	+
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTQMNPTLASCGR*IPFHDS Trigger: AGAGTCATGAAAGGGAATCCATCTGCCGCAGCTGGC...GAGTGTGGGGTTCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	ACTGAAGATGTACAGTGTTCACAGTTCACAACACCTCACACACATGGGGGAACTCTTGCTGCGGCGCATTaGGCCTGGGCTTTTAGCAGA	+
Preference number: 4 (lower is better) Translates to: TEDVQCSQFTTPHTHGGTLAAAH*AWAFSR Trigger: TCTGCTAAAAGCCCAGGCCCAATGCGCCGCAGCAAG...AGTTCCCCCATGTGTGTGAGGTGTTGTGAACTGTGAACACTGTACATCTTCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR TCA 90 bp	AGATCCTCCAGCATTCTGAAGATACAGAGGCAAGGGACACTTAGGTTTTTCGCTGGGCTGTTTTCTTGTTaGGAAGCACGCGCACAGCCT	+
Preference number: 4 (lower is better) Translates to: RSSSILKIQRQGTLRFFAGLFSC*EARAQP Trigger: AGGCTGTGCGCGTGCTTCTCAACAAGAAAACAGCCC...AGCGAAAAACCTAAGTGTCCCTTGCCTCTGTATCTTCAGAATGCTGGAGGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	AGGGTGCAACATGACCCTGGGAAAGAATTTGCAGGAGCCTCACAAAGGACAATAGTCTTGGTCGTTACCTaGGTCAGCTGGAGACTTGCT	+
Preference number: 4 (lower is better) Translates to: RVQHDPGKEFAGASQRTIVLVVT*VSWRLA Trigger: AGCAAGTCTCCAGCTGACTCAGGTAACGACCAAGAC...TATTGTCCTTTGTGAGGCTCCTGCAAATTCTTTCCCAGGGTCATGTTGCACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR GCA 90 bp	AACAGTCAGGAGGTAGGAACAAGCAACATATTCTTTGTGTGTGTGTGTGTGTGTAGTCAGCTGGAGACTTaGTGCGGCGCATTGGGCCTG	+
Preference number: 4 (lower is better) Translates to: NSQEVGTSNIFFVCVCVCSQLET*CGALGL Trigger: CAGGCCCAATGCGCCGCAGCAAGTCTCCAGCTGACT...ACACACACACACACACACAAAGAATATGTTGCTTGTTCCTACCTCCTGACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	TATATTCTACCTCATATCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATGAGTCAGCTGGAGACTTaGTGCGGCGCATTGGGCCTG	+
Preference number: 4 (lower is better) Translates to: YILPHIFQTALYHSPKHMSQLET*CGALGL Trigger: CAGGCCCAATGCGCCGCAGCAAGTCTCCAGCTGACT...CATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGATATGAGGTAGAATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	AGATCCTCCAGCATTCTGAAGATACAGAGGCAAGGGACACTTAGGTTTTTCGCTCTGCTAGCCAAGGACTaGGGGGCTTTCATGTTGGCA	+
Preference number: 4 (lower is better) Translates to: RSSSILKIQRQGTLRFFALLAKD*GAFMLA Trigger: TGCCAACATGAAAGCCCCCCAGTCCTTGGCTAGCAG...AGCGAAAAACCTAAGTGTCCCTTGCCTCTGTATCTTCAGAATGCTGGAGGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	TTTGCCCCTATTTCTATTTCTGTGGGGAAGAACAGTCAGGAGGTAGGAACAAGCCTGCTAGCCAAGGACTaGGGGGCTTTCATGTTGGCA	+
Preference number: 4 (lower is better) Translates to: FAPISISVGKNSQEVGTSLLAKD*GAFMLA Trigger: TGCCAACATGAAAGCCCCCCAGTCCTTGGCTAGCAG...GCTTGTTCCTACCTCCTGACTGTTCTTCCCCACAGAAATAGAAATAGGGGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TTTGCCCCTATTTCTATTTCTGTGGGGAAGAACAGTCAGGAGGTAGGAACAAGCGTCTTGGTCGTTACCTaGGTCAGCTGGAGACTTGCT	+
Preference number: 4 (lower is better) Translates to: FAPISISVGKNSQEVGTSVLVVT*VSWRLA Trigger: AGCAAGTCTCCAGCTGACTCAGGTAACGACCAAGAC...GCTTGTTCCTACCTCCTGACTGTTCTTCCCCACAGAAATAGAAATAGGGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	CCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTTGTCATCAATTCATATGTCAGTCAGGACCTaGTCGAAAGAGTGGGCTGTT	+
Preference number: 4 (lower is better) Translates to: PSYFPLHISNATKLSSIHMSVRT*SKEWAV Trigger: AACAGCCCACTCTTTCGAGCAGGTCCTGACTGACAT...ATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	TATATTCTACCTCATATCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATGCTTGCTGCGGCGCATTaGGCCTGGGCTTTTAGCAGA	+
Preference number: 4 (lower is better) Translates to: YILPHIFQTALYHSPKHMLAAAH*AWAFSR Trigger: TCTGCTAAAAGCCCAGGCCCAATGCGCCGCAGCAAG...CATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGATATGAGGTAGAATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CACACACACACACACACACACACACACACACACACACAAATGAACCCCACACTCGTTCCATTTGCGTCTTaGTCGTTACCTGAGTCAGCT	+
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTQMNPTLVPFAS*SLPESA Trigger: AGCTGACTCAGGTAACGACCAAGACGCAAATGGAAC...GAGTGTGGGGTTCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TATATTCTACCTCATATCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATGGGGCTGTTTTCTTGTTaGGAAGCACGCGCACAGCCT	+
Preference number: 4 (lower is better) Translates to: YILPHIFQTALYHSPKHMGLFSC*EARAQP Trigger: AGGCTGTGCGCGTGCTTCTCAACAAGAAAACAGCCC...CATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGATATGAGGTAGAATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	GAAACAGGCTACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTAGGTGTTGAGAGCTaGCTGCTGGAAGTTCCATTT	+
Preference number: 4 (lower is better) Translates to: ETGYTERERERERERERELGVES*LLEVPF Trigger: AAATGGAACTTCCAGCAGTCAGCTCTCAACACCTAA...CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTAGCCTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR GCA 90 bp	GTAGTGTTGGTTGTTTACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATAGTCAGCTGGAGACTTaGTGCGGCGCATTGGGCCTG	+
Preference number: 4 (lower is better) Translates to: VVLVVYKAFNRTELDGYHSQLET*CGALGL Trigger: CAGGCCCAATGCGCCGCAGCAAGTCTCCAGCTGACT...ATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTAAACAACCAACACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CACACACACACACACACACACACACACACACACACACAAATGAACCCCACACTCATGCCTGCAAGGTTCTaGTTCTGTAGAAGCTACAGT	+
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTQMNPTLMPARF*FCRSYS Trigger: ACTGTAGCTTCTACAGAACCAGAACCTTGCAGGCAT...GAGTGTGGGGTTCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTTGTCATCAATTCATGTTCCATTTGCGTCTTaGTCGTTACCTGAGTCAGCT	+
Preference number: 4 (lower is better) Translates to: PSYFPLHISNATKLSSIHVPFAS*SLPESA Trigger: AGCTGACTCAGGTAACGACCAAGACGCAAATGGAAC...ATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	AAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTGAAGATGTACGTACACAATCCCCTTaGAGTAACGGTCCCCATTGC	+
Preference number: 4 (lower is better) Translates to: KRLQEQLFGCPVLNTEDVRTQSP*SNGPHC Trigger: GCAATGGGGACCGTTACTTCAAGGGGATTGTGTACG...TACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR TCA 90 bp	TATATTCTACCTCATATCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATGTTGTTCTCTCTGGCTTaGGCACTGTTGCTGCTAGCC	+
Preference number: 4 (lower is better) Translates to: YILPHIFQTALYHSPKHMLFSLA*ALLLLA Trigger: GGCTAGCAGCAACAGTGCTCAAGCCAGAGAGAACAA...CATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGATATGAGGTAGAATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	CCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTTGTCATCAATTCATTTAGCAGATGTCTTTTaGGGTGTTGGGGAAGCCTTT	+
Preference number: 4 (lower is better) Translates to: PSYFPLHISNATKLSSIHLADVF*GVGEAF Trigger: AAAGGCTTCCCCAACACCTCAAAAGACATCTGCTAA...ATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	AGGGTGCAACATGACCCTGGGAAAGAATTTGCAGGAGCCTCACAAAGGACAATACTTCCAGTTCATCCATaGTTCCAATCTTCCTGGATC	+
Preference number: 4 (lower is better) Translates to: RVQHDPGKEFAGASQRTILPVHP*FQSSWI Trigger: GATCCAGGAAGATTGGAAGCATGGATGAACTGGAAG...TATTGTCCTTTGTGAGGCTCCTGCAAATTCTTTCCCAGGGTCATGTTGCACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR GCA 90 bp	GCTGGAGGATCTGGCCCAGAGGTTAAAAATAGATCTCCTACCACAATTTCTATCATGTCAGTCAGGACCTaGTCGAAAGAGTGGGCTGTT	+
Preference number: 4 (lower is better) Translates to: AGGSGPEVKNRSPTTISIMSVRT*SKEWAV Trigger: AACAGCCCACTCTTTCGAGCAGGTCCTGACTGACAT...GATAGAAATTGTGGTAGGAGATCTATTTTTAACCTCTGGGCCAGATCCTCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	TCGTCAAATCAAACACAGAATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTAGCCTTTGGGCCAGCTaGGGCAGATGGATTCCCTTT	+
Preference number: 4 (lower is better) Translates to: SSNQTQNWHAWLSPNFRCSLWAS*GRWIPF Trigger: AAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGGCT...ACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	TCGTCAAATCAAACACAGAATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTCTGCTAGCCAAGGACTaGGGGGCTTTCATGTTGGCA	+
Preference number: 4 (lower is better) Translates to: SSNQTQNWHAWLSPNFRCLLAKD*GAFMLA Trigger: TGCCAACATGAAAGCCCCCCAGTCCTTGGCTAGCAG...ACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CTTTCGTTGTCTTGGCTATTATGGGCTATGAATACAGAGAAAAAGCAATGTTATGCGCACAGCCTTCCGTaGCTTCACCCCGCTGCGAAT	+
Preference number: 4 (lower is better) Translates to: LSLSWLLWAMNTEKKQCYAHSLP*LHPAAN Trigger: ATTCGCAGCGGGGTGAAGCCACGGAAGGCTGTGCGC...ATAACATTGCTTTTTCTCTGTATTCATAGCCCATAATAGCCAAGACAACGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	AAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTGAAGATGTAGCCAGCTGCGGCAGATaGATTCCCTTTCATGACTCT	+
Preference number: 4 (lower is better) Translates to: KRLQEQLFGCPVLNTEDVASCGR*IPFHDS Trigger: AGAGTCATGAAAGGGAATCCATCTGCCGCAGCTGGC...TACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 72 bp	GAGAGAGGGGGTGTTATGGAAAATAGTGGCAAATGCTaGCTGACCATGCACGCTGAACTTGATGGGACTAAA	+
Preference number: 4 (lower is better) Translates to: ERGGVMENSGKC*LTMHAELDGTK Trigger: TTTAGTCCCATCAAGTTCAGCGTGCATGGTCAGCAAGCATTTGCCACTATTTTCCATAACACCCCCTCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATACCGTTCATGTACTAGGGCTGTTTTCTTGTTaGGAAGCACGCGCACAGCCT	+
Preference number: 4 (lower is better) Translates to: YKAFNRTELDGYHTVHVLGLFSC*EARAQP Trigger: AGGCTGTGCGCGTGCTTCTCAACAAGAAAACAGCCC...TAGTACATGAACGGTATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	AGATCCTCCAGCATTCTGAAGATACAGAGGCAAGGGACACTTAGGTTTTTCGCTTTAGCAGATGTCTTTTaGGGTGTTGGGGAAGCCTTT	+
Preference number: 4 (lower is better) Translates to: RSSSILKIQRQGTLRFFALADVF*GVGEAF Trigger: AAAGGCTTCCCCAACACCTCAAAAGACATCTGCTAA...AGCGAAAAACCTAAGTGTCCCTTGCCTCTGTATCTTCAGAATGCTGGAGGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TCGTCAAATCAAACACAGAATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTGTCTTGGTCGTTACCTaGGTCAGCTGGAGACTTGCT	+
Preference number: 4 (lower is better) Translates to: SSNQTQNWHAWLSPNFRCVLVVT*VSWRLA Trigger: AGCAAGTCTCCAGCTGACTCAGGTAACGACCAAGAC...ACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TCGTCAAATCAAACACAGAATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTATCAGAGTCATCCAATaGCAGCGGCAGGTACAGGTC	+
Preference number: 4 (lower is better) Translates to: SSNQTQNWHAWLSPNFRCIRVIQ*QRQVQV Trigger: GACCTGTACCTGCCGCTGTCATTGGATGACTCTGAT...ACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	TACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATACCGTTCATGTACTAAGCCTTTGGGCCAGCTaGGGCAGATGGATTCCCTTT	+
Preference number: 4 (lower is better) Translates to: YKAFNRTELDGYHTVHVLSLWAS*GRWIPF Trigger: AAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGGCT...TAGTACATGAACGGTATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	AGATCCTCCAGCATTCTGAAGATACAGAGGCAAGGGACACTTAGGTTTTTCGCTTCCTGGATCCGTCAATaGTATAAATGTAGCGCACTC	+
Preference number: 4 (lower is better) Translates to: RSSSILKIQRQGTLRFFASWIRQ*YKCSAL Trigger: GAGTGCGCTACATTTATACCATTGACGGATCCAGGA...AGCGAAAAACCTAAGTGTCCCTTGCCTCTGTATCTTCAGAATGCTGGAGGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	TCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTaGTCATCAATTCATGTTGAGTTGTCTTGTGCAGTA	+
Preference number: 4 (lower is better) Translates to: SYFPLHISNATK*SSIHVELSCAV Trigger: TACTGCACAAGACAACTCAACATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TCACAAAATGGCAGACAAAAAGAAGAAGCACAACGTGTTCTGTACAATGCTTGCAATCATGGAGACAGGTaGCCTGCTTTCCATCAAGGG	+
Preference number: 4 (lower is better) Translates to: SQNGRQKEEAQRVLYNACNHGDR*PAFHQG Trigger: CCCTTGATGGAAAGCAGGTCACCTGTCTCCATGATT...GCAAGCATTGTACAGAACACGTTGTGCTTCTTCTTTTTGTCTGCCATTTTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR GCA 90 bp	TTGGGAGCAGATGATGAGATCTTAATCCTCTTTCCAGCTAGAAAATGCTATAATAGCCTTTGGGCCAGCTaGGGCAGATGGATTCCCTTT	+
Preference number: 4 (lower is better) Translates to: LGADDEILILFPARKCYNSLWAS*GRWIPF Trigger: AAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGGCT...ATTATAGCATTTTCTAGCTGGAAAGAGGATTAAGATCTCATCATCTGCTCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR CCA 90 bp	TATATTCTACCTCATATCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATGAGTGGGCACTATGAGTaGGACTTGGAAGTCCATTCA	+
Preference number: 4 (lower is better) Translates to: YILPHIFQTALYHSPKHMSGHYE*DLEVHS Trigger: TGAATGGACTTCCAAGTCCCACTCATAGTGCCCACT...CATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGATATGAGGTAGAATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	AGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTGGCATGCAGCCAGCTGCGGCAGATaGATTCCCTTTCATGACTCT	+
Preference number: 4 (lower is better) Translates to: RSEGNLPISSNQTQNWHAASCGR*IPFHDS Trigger: AGAGTCATGAAAGGGAATCCATCTGCCGCAGCTGGC...TGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CTTTCGTTGTCTTGGCTATTATGGGCTATGAATACAGAGAAAAAGCAATGTTATCTTGCTGCGGCGCATTaGGCCTGGGCTTTTAGCAGA	+
Preference number: 4 (lower is better) Translates to: LSLSWLLWAMNTEKKQCYLAAAH*AWAFSR Trigger: TCTGCTAAAAGCCCAGGCCCAATGCGCCGCAGCAAG...ATAACATTGCTTTTTCTCTGTATTCATAGCCCATAATAGCCAAGACAACGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	TATATTCTACCTCATATCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATGGTTCCATTTGCGTCTTaGTCGTTACCTGAGTCAGCT	+
Preference number: 4 (lower is better) Translates to: YILPHIFQTALYHSPKHMVPFAS*SLPESA Trigger: AGCTGACTCAGGTAACGACCAAGACGCAAATGGAAC...CATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGATATGAGGTAGAATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	TGTCATCAATTCATGTTGAGTTGTCTTGTGCAGTATTaGCTAAGTATGAAGCAGCCTAGGCGTGCTTGCGCA	+
Preference number: 4 (lower is better) Translates to: CHQFMLSCLVQY*LSMKQPRRACA Trigger: TGCGCAAGCACGCCTAGGCTGCTTCATACTTAGCAAATACTGCACAAGACAACTCAACATGAATTGATGACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	AGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTGGCATGCAAATCATGGAGACAGGTaGCCTGCTTTCCATCAAGGG	+
Preference number: 4 (lower is better) Translates to: RSEGNLPISSNQTQNWHANHGDR*PAFHQG Trigger: CCCTTGATGGAAAGCAGGTCACCTGTCTCCATGATT...TGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CCAAATTTCCCCAGTAGAGGGGTTAACCAGGAATCCACTGTGCTTTATACAAATATGCCTGCAAGGTTCTaGTTCTGTAGAAGCTACAGT	+
Preference number: 4 (lower is better) Translates to: PNFPSRGVNQESTVLYTNMPARF*FCRSYS Trigger: ACTGTAGCTTCTACAGAACCAGAACCTTGCAGGCAT...ATTTGTATAAAGCACAGTGGATTCCTGGTTAACCCCTCTACTGGGGAAATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	TTAAGAAATACTTCACTTCCCAATGATAGCCAATCTCACACCAGTTTGGCCAAAAGTCCTTGTTCTCTCTaGCTTGAGCACTGTTGCTGC	+
Preference number: 4 (lower is better) Translates to: LRNTSLPNDSQSHTSLAKSPCSL*LEHCCC Trigger: GCAGCAACAGTGCTCAAGCCAGAGAGAACAAGGACT...TTTGGCCAAACTGGTGTGAGATTGGCTATCATTGGGAAGTGAAGTATTTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR CCA 90 bp	CCTTCCAGAGAAGGAAGACTAGTTTCTGAACAAATTGAGTGGGGAAAATACAAAAGTCCTTGTTCTCTCTaGCTTGAGCACTGTTGCTGC	+
Preference number: 4 (lower is better) Translates to: PSREGRLVSEQIEWGKYKSPCSL*LEHCCC Trigger: GCAGCAACAGTGCTCAAGCCAGAGAGAACAAGGACT...TTTGTATTTTCCCCACTCAATTTGTTCAGAAACTAGTCTTCCTTCTCTGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CCAAATTTCCCCAGTAGAGGGGTTAACCAGGAATCCACTGTGCTTTATACAAATACCTGCTCGAAAGAGTaGGCTGTTTTCTTGTTGAGA	+
Preference number: 4 (lower is better) Translates to: PNFPSRGVNQESTVLYTNTCSKE*AVFLLR Trigger: TCTCAACAAGAAAACAGCCCACTCTTTCGAGCAGGT...ATTTGTATAAAGCACAGTGGATTCCTGGTTAACCCCTCTACTGGGGAAATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	AAGTCAGTGACCTATTCTTGCTCCAGGTGGTCATGTTaGAAAGAAGAGGAAATCCTTCAGGATTCACGTAAC	+
Preference number: 4 (lower is better) Translates to: KSVTYSCSRWSC*KEEEILQDSRN Trigger: GTTACGTGAATCCTGAAGGATTTCCTCTTCTTTCAAACATGACCACCTGGAGCAAGAATAGGTCACTGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 72 bp	AAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATaGAACACTGAAGATGTACAGTGTTCACAGTTCACA	+
Preference number: 4 (lower is better) Translates to: KRLQEQLFGCPV*NTEDVQCSQFT Trigger: TGTGAACTGTGAACACTGTACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR TCA 90 bp	CTGAACAATTACAAAGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACTTGTTCTCTCTGGCTTaGGCACTGTTGCTGCTAGCC	+
Preference number: 4 (lower is better) Translates to: LNNYKEVKEIFLSRQIKHLFSLA*ALLLLA Trigger: GGCTAGCAGCAACAGTGCTCAAGCCAGAGAGAACAA...GTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCTTTGTAATTGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TCGTCAAATCAAACACAGAATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTTTAGGTGTTGAGAGCTaGCTGCTGGAAGTTCCATTT	+
Preference number: 4 (lower is better) Translates to: SSNQTQNWHAWLSPNFRCLGVES*LLEVPF Trigger: AAATGGAACTTCCAGCAGTCAGCTCTCAACACCTAA...ACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	CTTTCGTTGTCTTGGCTATTATGGGCTATGAATACAGAGAAAAAGCAATGTTATATCAGAGTCATCCAATaGCAGCGGCAGGTACAGGTC	+
Preference number: 4 (lower is better) Translates to: LSLSWLLWAMNTEKKQCYIRVIQ*QRQVQV Trigger: GACCTGTACCTGCCGCTGTCATTGGATGACTCTGAT...ATAACATTGCTTTTTCTCTGTATTCATAGCCCATAATAGCCAAGACAACGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	CTGAACAATTACAAAGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACATCAGAGTCATCCAATaGCAGCGGCAGGTACAGGTC	+
Preference number: 4 (lower is better) Translates to: LNNYKEVKEIFLSRQIKHIRVIQ*QRQVQV Trigger: GACCTGTACCTGCCGCTGTCATTGGATGACTCTGAT...GTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCTTTGTAATTGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	CCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTTGTCATCAATTCATTCTCATATTTCTAGATaGTTTGTCTCGTTCGTCAAA	+
Preference number: 4 (lower is better) Translates to: PSYFPLHISNATKLSSIHSHISR*FVSFVK Trigger: TTTGACGAACGAGACAAAGCATCTAGAAATATGAGA...ATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	TACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATACCGTTCATGTACTAAGTAACGGTCCCCATTaGGGTAGAAACGTACCTTCT	+
Preference number: 4 (lower is better) Translates to: YKAFNRTELDGYHTVHVLSNGPH*GRNVPS Trigger: AGAAGGTACGTTTCTACCGCAATGGGGACCGTTACT...TAGTACATGAACGGTATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CCTTCCAGAGAAGGAAGACTAGTTTCTGAACAAATTGAGTGGGGAAAATACAAAAGTGGGCACTATGAGTaGGACTTGGAAGTCCATTCA	+
Preference number: 4 (lower is better) Translates to: PSREGRLVSEQIEWGKYKSGHYE*DLEVHS Trigger: TGAATGGACTTCCAAGTCCCACTCATAGTGCCCACT...TTTGTATTTTCCCCACTCAATTTGTTCAGAAACTAGTCTTCCTTCTCTGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	AGCAATGCCACCAAGTTGTCATCAATTCATGTTGAGTaGTCTTGTGCAGTATTTGCTAAGTATGAAGCAGCC	+
Preference number: 4 (lower is better) Translates to: SNATKLSSIHVE*SCAVFAKYEAA Trigger: GGCTGCTTCATACTTAGCAAATACTGCACAAGACAACTCAACATGAATTGATGACAACTTGGTGGCATTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	AGTAATGTGAAAGTGAGGAGGAAGGGCCAGATTATATaGCTGTGTGGATTTCTTGCTGAGACCAACAAAGTA	+
Preference number: 4 (lower is better) Translates to: SNVKVRRKGQII*LCGFLAETNKV Trigger: TACTTTGTTGGTCTCAGCAAGAAATCCACACAGCAATATAATCTGGCCCTTCCTCCTCACTTTCACATTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 72 bp	AGTGACAAAAGACACTTGTTTATACCTGAAAATTGTTaGTACCAGGGAGCATGGCTACAAGGGCGTAGAGAT	+
Preference number: 4 (lower is better) Translates to: SDKRHLFIPENC*YQGAWLQGRRD Trigger: ATCTCTACGCCCTTGTAGCCATGCTCCCTGGTACAAACAATTTTCAGGTATAAACAAGTGTCTTTTGTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 72 bp	AAATCAAGCATTGAGTCATTTGCCTTCAACTTAGGCTaGATGATTCTAGGACATGGAAGCTACCTACCCACT	+
Preference number: 4 (lower is better) Translates to: KSSIESFAFNLG*MILGHGSYLPT Trigger: AGTGGGTAGGTAGCTTCCATGTCCTAGAATCATCAAGCCTAAGTTGAAGGCAAATGACTCAATGCTTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR TCA 90 bp	TCGTCAAATCAAACACAGAATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTAAGTCCATTCATCCGTaGCCCTCTCATATTTCTAGA	+
Preference number: 4 (lower is better) Translates to: SSNQTQNWHAWLSPNFRCKSIHP*PSHISR Trigger: TCTAGAAATATGAGAGGGTCACGGATGAATGGACTT...ACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	GTAGTGTTGGTTGTTTACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATTTAGGTGTTGAGAGCTaGCTGCTGGAAGTTCCATTT	+
Preference number: 4 (lower is better) Translates to: VVLVVYKAFNRTELDGYHLGVES*LLEVPF Trigger: AAATGGAACTTCCAGCAGTCAGCTCTCAACACCTAA...ATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTAAACAACCAACACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	ATACAAATCCTACTGAAATTTGGGCAGTTTTCCCCCTATATTCTACCTCATATCAGTAACGGTCCCCATTaGGGTAGAAACGTACCTTCT	+
Preference number: 4 (lower is better) Translates to: IQILLKFGQFSPYILPHISNGPH*GRNVPS Trigger: AGAAGGTACGTTTCTACCGCAATGGGGACCGTTACT...GATATGAGGTAGAATATAGGGGGAAAACTGCCCAAATTTCAGTAGGATTTGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	GTAGTGTTGGTTGTTTACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATCTTCCAGTTCATCCATaGTTCCAATCTTCCTGGATC	+
Preference number: 4 (lower is better) Translates to: VVLVVYKAFNRTELDGYHLPVHP*FQSSWI Trigger: GATCCAGGAAGATTGGAAGCATGGATGAACTGGAAG...ATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTAAACAACCAACACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	AAAGAGAAGTCCTTCCTAATGTTAAAGTCAAGTGAAAGGTTTCTGCATCTTAAGATGTCAGTCAGGACCTaGTCGAAAGAGTGGGCTGTT	+
Preference number: 4 (lower is better) Translates to: KEKSFLMLKSSERFLHLKMSVRT*SKEWAV Trigger: AACAGCCCACTCTTTCGAGCAGGTCCTGACTGACAT...CTTAAGATGCAGAAACCTTTCACTTGACTTTAACATTAGGAAGGACTTCTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CCTTCCAGAGAAGGAAGACTAGTTTCTGAACAAATTGAGTGGGGAAAATACAAATCCTGGATCCGTCAATaGTATAAATGTAGCGCACTC	+
Preference number: 4 (lower is better) Translates to: PSREGRLVSEQIEWGKYKSWIRQ*YKCSAL Trigger: GAGTGCGCTACATTTATACCATTGACGGATCCAGGA...TTTGTATTTTCCCCACTCAATTTGTTCAGAAACTAGTCTTCCTTCTCTGGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATACCGTTCATGTACTAAAGTCCATTCATCCGTaGCCCTCTCATATTTCTAGA	+
Preference number: 4 (lower is better) Translates to: YKAFNRTELDGYHTVHVLKSIHP*PSHISR Trigger: TCTAGAAATATGAGAGGGTCACGGATGAATGGACTT...TAGTACATGAACGGTATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TCGTCAAATCAAACACAGAATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTTTTAAAGAAGTTGTCTaGGGAGCAGACATAGCTTTC	+
Preference number: 4 (lower is better) Translates to: SSNQTQNWHAWLSPNFRCFKEVV*GADIAF Trigger: GAAAGCTATGTCTGCTCCTCAGACAACTTCTTTAAA...ACAACGAAAGTTAGGTGAAAGCCATGCATGCCAATTCTGTGTTTGATTTGACGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR TCA 90 bp	TTGGGAGCAGATGATGAGATCTTAATCCTCTTTCCAGCTAGAAAATGCTATAATTTAGCAGATGTCTTTTaGGGTGTTGGGGAAGCCTTT	+
Preference number: 4 (lower is better) Translates to: LGADDEILILFPARKCYNLADVF*GVGEAF Trigger: AAAGGCTTCCCCAACACCTCAAAAGACATCTGCTAA...ATTATAGCATTTTCTAGCTGGAAAGAGGATTAAGATCTCATCATCTGCTCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR CCA 90 bp	CTGAACAATTACAAAGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGTGGGCACTATGAGTaGGACTTGGAAGTCCATTCA	+
Preference number: 4 (lower is better) Translates to: LNNYKEVKEIFLSRQIKHSGHYE*DLEVHS Trigger: TGAATGGACTTCCAAGTCCCACTCATAGTGCCCACT...GTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCTTTGTAATTGTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	ATACAAATCCTACTGAAATTTGGGCAGTTTTCCCCCTATATTCTACCTCATATCACCTGCTCGAAAGAGTaGGCTGTTTTCTTGTTGAGA	+
Preference number: 4 (lower is better) Translates to: IQILLKFGQFSPYILPHITCSKE*AVFLLR Trigger: TCTCAACAAGAAAACAGCCCACTCTTTCGAGCAGGT...GATATGAGGTAGAATATAGGGGGAAAACTGCCCAAATTTCAGTAGGATTTGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	AGAGCTAGATGGATACCATACCGTTCATGTACTAACTaGTACATTAGAAAGCCTCCTGGAAGGATCATGTAT	+
Preference number: 4 (lower is better) Translates to: RARWIPYRSCTN*YIRKPPGRIMY Trigger: ATACATGATCCTTCCAGGAGGCTTTCTAATGTACAAGTTAGTACATGAACGGTATGGTATCCATCTAGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	ATTGGCATGCATGGCTTTCACCTAACTTTCGTTGTCTaGGCTATTATGGGCTATGAATACAGAGAAAAAGCA	+
Preference number: 4 (lower is better) Translates to: IGMHGFHLTFVV*AIMGYEYREKA Trigger: TGCTTTTTCTCTGTATTCATAGCCCATAATAGCCAAGACAACGAAAGTTAGGTGAAAGCCATGCATGCCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	AAGAGAGAACAGCAAACCAAAGAAGAGAGTGTCTTGTaGAAACACTGCCTTTGTATCACTCAAAGCACTAAG	+
Preference number: 4 (lower is better) Translates to: KREQQTKEESVL*KHCLCITQSTK Trigger: CTTAGTGCTTTGAGTGATACAAAGGCAGTGTTTCAACAAGACACTCTCTTCTTTGGTTTGCTGTTCTCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR TCA 90 bp	AGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTGGCATGCATTTAAAGAAGTTGTCTaGGGAGCAGACATAGCTTTC	+
Preference number: 4 (lower is better) Translates to: RSEGNLPISSNQTQNWHAFKEVV*GADIAF Trigger: GAAAGCTATGTCTGCTCCTCAGACAACTTCTTTAAA...TGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	AAAGAGAAGTCCTTCCTAATGTTAAAGTCAAGTGAAAGGTTTCTGCATCTTAAGCTTCCAGTTCATCCATaGTTCCAATCTTCCTGGATC	+
Preference number: 4 (lower is better) Translates to: KEKSFLMLKSSERFLHLKLPVHP*FQSSWI Trigger: GATCCAGGAAGATTGGAAGCATGGATGAACTGGAAG...CTTAAGATGCAGAAACCTTTCACTTGACTTTAACATTAGGAAGGACTTCTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CCA 90 bp	CTTTCGTTGTCTTGGCTATTATGGGCTATGAATACAGAGAAAAAGCAATGTTATACCTGCTCGAAAGAGTaGGCTGTTTTCTTGTTGAGA	+
Preference number: 4 (lower is better) Translates to: LSLSWLLWAMNTEKKQCYTCSKE*AVFLLR Trigger: TCTCAACAAGAAAACAGCCCACTCTTTCGAGCAGGT...ATAACATTGCTTTTTCTCTGTATTCATAGCCCATAATAGCCAAGACAACGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	ACATCAGCAATGCCACCAAGTTGTCATCAATTCATGTaGAGTTGTCTTGTGCAGTATTTGCTAAGTATGAAG	+
Preference number: 4 (lower is better) Translates to: TSAMPPSCHQFM*SCLVQYLLSMK Trigger: CTTCATACTTAGCAAATACTGCACAAGACAACTCAACATGAATTGATGACAACTTGGTGGCATTGCTGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
3UTR CAA 72 bp	ATTGTTGTGAAATTCTCTTCACCCCTTTTGGGTTATTaGCTCCTTGCTAACTTTACTTGGCAGAAACTCTTG	+
Preference number: 4 (lower is better) Translates to: IVVKFSSPLLGY*LLANFTWQKLL Trigger: CAAGAGTTTCTGCCAAGTAAAGTTAGCAAGGAGCAAATAACCCAAAAGGGGTGAAGAGAATTTCACAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 72 bp	AATGCCTCACAAGTAATGCAGGGATCAGGGACATCCTaGGGTTGTATGATTCTAAGAATTTTTCAATTCTGT	+
Preference number: 4 (lower is better) Translates to: NASQVMQGSGTS*GCMILRIFQFC Trigger: ACAGAATTGAAAAATTCTTAGAATCATACAACCCAAGGATGTCCCTGATCCCTGCATTACTTGTGAGGCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR TCA 90 bp	CTCCTACCACAATTTCTATCCATCCCAAATAACCAATTTTCCCTAATTAACTCAAAGTCCATTCATCCGTaGCCCTCTCATATTTCTAGA	+
Preference number: 4 (lower is better) Translates to: LLPQFLSIPNNQFSLINSKSIHP*PSHISR Trigger: TCTAGAAATATGAGAGGGTCACGGATGAATGGACTT...TGAGTTAATTAGGGAAAATTGGTTATTTGGGATGGATAGAAATTGTGGTAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	CTTTCGTTGTCTTGGCTATTATGGGCTATGAATACAGAGAAAAAGCAATGTTATGTAGAGATAGGAGACTaGTTTGACTTAGGTGTTGAG	+
Preference number: 4 (lower is better) Translates to: LSLSWLLWAMNTEKKQCYVEIGD*FDLGVE Trigger: CTCAACACCTAAGTCAAAGCAGTCTCCTATCTCTAC...ATAACATTGCTTTTTCTCTGTATTCATAGCCCATAATAGCCAAGACAACGAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	AAAGAGAAGTCCTTCCTAATGTTAAAGTCAAGTGAAAGGTTTCTGCATCTTAAGGTAGAGATAGGAGACTaGTTTGACTTAGGTGTTGAG	+
Preference number: 4 (lower is better) Translates to: KEKSFLMLKSSERFLHLKVEIGD*FDLGVE Trigger: CTCAACACCTAAGTCAAAGCAGTCTCCTATCTCTAC...CTTAAGATGCAGAAACCTTTCACTTGACTTTAACATTAGGAAGGACTTCTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	CTCCTACCACAATTTCTATCCATCCCAAATAACCAATTTTCCCTAATTAACTCAGTAGAGATAGGAGACTaGTTTGACTTAGGTGTTGAG	+
Preference number: 4 (lower is better) Translates to: LLPQFLSIPNNQFSLINSVEIGD*FDLGVE Trigger: CTCAACACCTAAGTCAAAGCAGTCTCCTATCTCTAC...TGAGTTAATTAGGGAAAATTGGTTATTTGGGATGGATAGAAATTGTGGTAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR CAA 72 bp	ATCAAAAAGAAAGCACAAAAAGTCAGTGACCTATTCTaGCTCCAGGTGGTCATGTTTGAAAGAAGAGGAAAT	+
Preference number: 4 (lower is better) Translates to: IKKKAQKVSDLF*LQVVMFERRGN Trigger: ATTTCCTCTTCTTTCAAACATGACCACCTGGAGCAAGAATAGGTCACTGACTTTTTGTGCTTTCTTTTTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR TCA 90 bp	CTGAACAATTACAAAGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACTTTAAAGAAGTTGTCTaGGGAGCAGACATAGCTTTC	+
Preference number: 4 (lower is better) Translates to: LNNYKEVKEIFLSRQIKHFKEVV*GADIAF Trigger: GAAAGCTATGTCTGCTCCTCAGACAACTTCTTTAAA...GTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCTTTGTAATTGTTCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	GTAGTGTTGGTTGTTTACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATTCTCATATTTCTAGATaGTTTGTCTCGTTCGTCAAA	+
Preference number: 4 (lower is better) Translates to: VVLVVYKAFNRTELDGYHSHISR*FVSFVK Trigger: TTTGACGAACGAGACAAAGCATCTAGAAATATGAGA...ATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTAAACAACCAACACTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR GCA 90 bp	TTGGGAGCAGATGATGAGATCTTAATCCTCTTTCCAGCTAGAAAATGCTATAATTCTCATATTTCTAGATaGTTTGTCTCGTTCGTCAAA	+
Preference number: 4 (lower is better) Translates to: LGADDEILILFPARKCYNSHISR*FVSFVK Trigger: TTTGACGAACGAGACAAAGCATCTAGAAATATGAGA...ATTATAGCATTTTCTAGCTGGAAAGAGGATTAAGATCTCATCATCTGCTCCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 72 bp	TCAGTAGAATCTCCATGTCTCATCTTAAATGAATACTaGGGACAACATGGGATTTGCTCAAAGAACAACATA	+
Preference number: 4 (lower is better) Translates to: SVESPCLILNEY*GQHGICSKNNI Trigger: TATGTTGTTCTTTGAGCAAATCCCATGTTGTCCCAAGTATTCATTTAAGATGAGACATGGAGATTCTACTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
3UTR CAA 72 bp	AACAGGAAATGGAATGACAAAAAGCCATTTATTTCCTaGAGTTATTGCCCAAAATCGAGACATTCTGAAGCT	+
Preference number: 4 (lower is better) Translates to: NRKWNDKKPFIS*SYCPKSRHSEA Trigger: AGCTTCAGAATGTCTCGATTTTGGGCAATAACTCAAGGAAATAAATGGCTTTTTGTCATTCCATTTCCTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
3UTR CAA 72 bp	CAGGAACAATTACCTGTGGTCTCTCATGACATTATATaGCAGCTTTTCGAAGCTATGAGCAAATTTAATGAT	+
Preference number: 4 (lower is better) Translates to: QEQLPVVSHDII*QLFEAMSKFND Trigger: ATCATTAAATTTGCTCATAGCTTCGAAAAGCTGCAATATAATGTCATGAGAGACCACAGGTAATTGTTCCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS CCA 90 bp	GCGGCGCATTGGGCCTGGGCTTTTAGCAGATGTCTTTTGAGGTGTTaGGGAAGCCTTTGGGCCAGCTGCGGCAGATGGATTCCCTTTCAT	+
Preference number: 5 (lower is better) Translates to: AAHWAWAFSRCLLRC*GSLWASCGRWIPFH Trigger: ATGAAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGGCTTCCCCAACACCTCAAAAGACATCTGCTAAAAGCCCAGGCCCAATGCGCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS GCA 90 bp	GAATCAGAGTCATCCAATGACAGCGGCAGGTACAGGTCTACCTTGTaGTTCCGCAGACTTCCAGGGCTTGTGGGTGTAGAGATAGGAGAC	+
Preference number: 5 (lower is better) Translates to: ESESSNDSGRYRSTL*FRRLPGLVGVEIGD Trigger: GTCTCCTATCTCTACACCCACAAGCCCTGGAAGTCTGCGGAAGCACAAGGTAGACCTGTACCTGCCGCTGTCATTGGATGACTCTGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10
CDS-3UTR CAA 90 bp	AGATCCTCCAGCATTCTGAAGATACAGAGGCAAGGGACACTTAGGTTTTTCGCTGAGTCAGCTGGAGACTaGCTGCGGCGCATTGGGCCT	+
Preference number: 5 (lower is better) Translates to: RSSSILKIQRQGTLRFFAESAGD*LRRIGP Trigger: AGGCCCAATGCGCCGCAGCAAGTCTCCAGCTGACTC...AGCGAAAAACCTAAGTGTCCCTTGCCTCTGTATCTTCAGAATGCTGGAGGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	CACACACACACACACACACACACACACACACACACACAAATGAACCCCACACTCCTTGTTCTCTCTGGCTaGAGCACTGTTGCTGCTAGC	+
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTQMNPTLLVLSG*STVAAS Trigger: GCTAGCAGCAACAGTGCTCAAGCCAGAGAGAACAAG...GAGTGTGGGGTTCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS TCA 90 bp	GTGGGTGTAGAGATAGGAGACTGCTTTGACTTAGGTGTTGAGAGCTaGCTGCTGGAAGTTCCATTTGCTGAGTCAGCTGGAGACTTGCTG	+
Preference number: 5 (lower is better) Translates to: VGVEIGDCFDLGVES*LLEVPFAESAGDLL Trigger: CAGCAAGTCTCCAGCTGACTCAGCAAATGGAACTTCCAGCAGTCAGCTCTCAACACCTAAGTCAAAGCAGTCTCCTATCTCTACACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112856.3
CDS CCA 90 bp	TGTCTTTTGAGGTGTTGGGGAAGCCTTTGGGCCAGCTGCGGCAGATaGATTCCCTTTCATGACTCTGCATTCATTCTCATCCAAGGAGAA	+
Preference number: 5 (lower is better) Translates to: CLLRCWGSLWASCGR*IPFHDSAFILIQGE Trigger: TTCTCCTTGGATGAGAATGAATGCAGAGTCATGAAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGGCTTCCCCAACACCTCAAAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS-3UTR CAA 90 bp	GAAACAGGCTACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGATGGTCACAAGTTaGGGGCGCACAAAGTCCTTG	+
Preference number: 5 (lower is better) Translates to: ETGYTEREREREREREREMMVTS*GRTKSL Trigger: CAAGGACTTTGTGCGCCCCAAACTTGTGACCATCAT...CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTAGCCTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS TCA 90 bp	GTGGGTGTAGAGATAGGAGACTGCTTTGACTTAGGTGTTGAGAGCTaGCTGCTGGAAGTTCCATTTGCGTCTTGGTCGTTACCTGAGTCA	+
Preference number: 5 (lower is better) Translates to: VGVEIGDCFDLGVES*LLEVPFASWSLPES Trigger: TGACTCAGGTAACGACCAAGACGCAAATGGAACTTCCAGCAGTCAGCTCTCAACACCTAAGTCAAAGCAGTCTCCTATCTCTACACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS GCA 90 bp	TTTAGCAGATGTCTTTTGAGGTGTTGGGGAAGCCTTTGGGCCAGCTaGGGCAGATGGATTCCCTTTCATGACTCTGCATTCATTCTCATC	+
Preference number: 5 (lower is better) Translates to: FSRCLLRCWGSLWAS*GRWIPFHDSAFILI Trigger: GATGAGAATGAATGCAGAGTCATGAAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGGCTTCCCCAACACCTCAAAAGACATCTGCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS-3UTR CAA 90 bp	TTTGCCCCTATTTCTATTTCTGTGGGGAAGAACAGTCAGGAGGTAGGAACAAGCGAGTGGGCTGTTTTCTaGTTGAGAAGCACGCGCACA	+
Preference number: 5 (lower is better) Translates to: FAPISISVGKNSQEVGTSEWAVF*LRSTRT Trigger: TGTGCGCGTGCTTCTCAACAAGAAAACAGCCCACTC...GCTTGTTCCTACCTCCTGACTGTTCTTCCCCACAGAAATAGAAATAGGGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	TTAAGAAATACTTCACTTCCCAATGATAGCCAATCTCACACCAGTTTGGCCAAAGAGTCAGCTGGAGACTaGCTGCGGCGCATTGGGCCT	+
Preference number: 5 (lower is better) Translates to: LRNTSLPNDSQSHTSLAKESAGD*LRRIGP Trigger: AGGCCCAATGCGCCGCAGCAAGTCTCCAGCTGACTC...TTTGGCCAAACTGGTGTGAGATTGGCTATCATTGGGAAGTGAAGTATTTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR CAA 90 bp	ATACAAATCCTACTGAAATTTGGGCAGTTTTCCCCCTATATTCTACCTCATATCGAGTCAGCTGGAGACTaGCTGCGGCGCATTGGGCCT	+
Preference number: 5 (lower is better) Translates to: IQILLKFGQFSPYILPHIESAGD*LRRIGP Trigger: AGGCCCAATGCGCCGCAGCAAGTCTCCAGCTGACTC...GATATGAGGTAGAATATAGGGGGAAAACTGCCCAAATTTCAGTAGGATTTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	AGGGTGCAACATGACCCTGGGAAAGAATTTGCAGGAGCCTCACAAAGGACAATATTTAGCAGATGTCTTTaGAGGTGTTGGGGAAGCCTT	+
Preference number: 5 (lower is better) Translates to: RVQHDPGKEFAGASQRTIFSRCL*RCWGSL Trigger: AAGGCTTCCCCAACACCTCAAAAGACATCTGCTAAA...TATTGTCCTTTGTGAGGCTCCTGCAAATTCTTTCCCAGGGTCATGTTGCACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR CAA 90 bp	TATATTCTACCTCATATCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATGCACTATGAGTGGGACTaGGAAGTCCATTCATCCGTG	+
Preference number: 5 (lower is better) Translates to: YILPHIFQTALYHSPKHMHYEWD*EVHSSV Trigger: CACGGATGAATGGACTTCCAAGTCCCACTCATAGTG...CATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGATATGAGGTAGAATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	TCACAAAATGGCAGACAAAAAGAAGAAGCACAACGTGTTCTGTACAATGCTTGCCTTGTTCTCTCTGGCTaGAGCACTGTTGCTGCTAGC	+
Preference number: 5 (lower is better) Translates to: SQNGRQKEEAQRVLYNACLVLSG*STVAAS Trigger: GCTAGCAGCAACAGTGCTCAAGCCAGAGAGAACAAG...GCAAGCATTGTACAGAACACGTTGTGCTTCTTCTTTTTGTCTGCCATTTTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR CAA 90 bp	AACAGTCAGGAGGTAGGAACAAGCAACATATTCTTTGTGTGTGTGTGTGTGTGTATGATGGTCACAAGTTaGGGGCGCACAAAGTCCTTG	+
Preference number: 5 (lower is better) Translates to: NSQEVGTSNIFFVCVCVCMMVTS*GRTKSL Trigger: CAAGGACTTTGTGCGCCCCAAACTTGTGACCATCAT...ACACACACACACACACACAAAGAATATGTTGCTTGTTCCTACCTCCTGACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	TTTGCCCCTATTTCTATTTCTGTGGGGAAGAACAGTCAGGAGGTAGGAACAAGCTTTAGCAGATGTCTTTaGAGGTGTTGGGGAAGCCTT	+
Preference number: 5 (lower is better) Translates to: FAPISISVGKNSQEVGTSFSRCL*RCWGSL Trigger: AAGGCTTCCCCAACACCTCAAAAGACATCTGCTAAA...GCTTGTTCCTACCTCCTGACTGTTCTTCCCCACAGAAATAGAAATAGGGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	CCATCCTACTTCCCCCTGCACATCAGCAATGCCACCAAGTTGTCATCAATTCATTTGGGGTTGACATTCTaGGTGTACTCAACCTTTTTA	+
Preference number: 5 (lower is better) Translates to: PSYFPLHISNATKLSSIHLGLTF*VYSTFL Trigger: TAAAAAGGTTGAGTACACCAAGAATGTCAACCCCAA...ATGAATTGATGACAACTTGGTGGCATTGCTGATGTGCAGGGGGAAGTAGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	AGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTGGCATGCACTTGTTCTCTCTGGCTaGAGCACTGTTGCTGCTAGC	+
Preference number: 5 (lower is better) Translates to: RSEGNLPISSNQTQNWHALVLSG*STVAAS Trigger: GCTAGCAGCAACAGTGCTCAAGCCAGAGAGAACAAG...TGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	TACAAGGCATTCAATAGAACAGAGCTAGATGGATACCATACCGTTCATGTACTAGAGTGGGCTGTTTTCTaGTTGAGAAGCACGCGCACA	+
Preference number: 5 (lower is better) Translates to: YKAFNRTELDGYHTVHVLEWAVF*LRSTRT Trigger: TGTGCGCGTGCTTCTCAACAAGAAAACAGCCCACTC...TAGTACATGAACGGTATGGTATCCATCTAGCTCTGTTCTATTGAATGCCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	AGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACAGAATTGGCATGCACACTATGAGTGGGACTaGGAAGTCCATTCATCCGTG	+
Preference number: 5 (lower is better) Translates to: RSEGNLPISSNQTQNWHAHYEWD*EVHSSV Trigger: CACGGATGAATGGACTTCCAAGTCCCACTCATAGTG...TGCATGCCAATTCTGTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	AGATCCTCCAGCATTCTGAAGATACAGAGGCAAGGGACACTTAGGTTTTTCGCTCAAGGAGAAATCATCTaGAGCATAGCGGAATTTTTC	+
Preference number: 5 (lower is better) Translates to: RSSSILKIQRQGTLRFFAQGEII*SIAEFF Trigger: GAAAAATTCCGCTATGCTCAAGATGATTTCTCCTTG...AGCGAAAAACCTAAGTGTCCCTTGCCTCTGTATCTTCAGAATGCTGGAGGATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	TATATTCTACCTCATATCTTTCAGACAGCCCTATACCACAGCCCTAAGCACATGTTTAGCAGATGTCTTTaGAGGTGTTGGGGAAGCCTT	+
Preference number: 5 (lower is better) Translates to: YILPHIFQTALYHSPKHMFSRCL*RCWGSL Trigger: AAGGCTTCCCCAACACCTCAAAAGACATCTGCTAAA...CATGTGCTTAGGGCTGTGGTATAGGGCTGTCTGAAAGATATGAGGTAGAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	ATACAAATCCTACTGAAATTTGGGCAGTTTTCCCCCTATATTCTACCTCATATCCACTATGAGTGGGACTaGGAAGTCCATTCATCCGTG	+
Preference number: 5 (lower is better) Translates to: IQILLKFGQFSPYILPHIHYEWD*EVHSSV Trigger: CACGGATGAATGGACTTCCAAGTCCCACTCATAGTG...GATATGAGGTAGAATATAGGGGGAAAACTGCCCAAATTTCAGTAGGATTTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	CTGAACAATTACAAAGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACGAGTGGGCTGTTTTCTaGTTGAGAAGCACGCGCACA	+
Preference number: 5 (lower is better) Translates to: LNNYKEVKEIFLSRQIKHEWAVF*LRSTRT Trigger: TGTGCGCGTGCTTCTCAACAAGAAAACAGCCCACTC...GTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCTTTGTAATTGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	CTGAACAATTACAAAGAAGTGAAGGAAATCTTCCTATCTCGTCAAATCAAACACATGATGGTCACAAGTTaGGGGCGCACAAAGTCCTTG	+
Preference number: 5 (lower is better) Translates to: LNNYKEVKEIFLSRQIKHMMVTS*GRTKSL Trigger: CAAGGACTTTGTGCGCCCCAAACTTGTGACCATCAT...GTGTTTGATTTGACGAGATAGGAAGATTTCCTTCACTTCTTTGTAATTGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	AAAAGATTGCAAGAGCAGCTCTTTGGCTGCCCAGTATTGAACACTGAAGATGTACAAGGAGAAATCATCTaGAGCATAGCGGAATTTTTC	+
Preference number: 5 (lower is better) Translates to: KRLQEQLFGCPVLNTEDVQGEII*SIAEFF Trigger: GAAAAATTCCGCTATGCTCAAGATGATTTCTCCTTG...TACATCTTCAGTGTTCAATACTGGGCAGCCAAAGAGCTGCTCTTGCAATCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033642.10
CDS-3UTR CAA 90 bp	ATACAAATCCTACTGAAATTTGGGCAGTTTTCCCCCTATATTCTACCTCATATCCAAGGAGAAATCATCTaGAGCATAGCGGAATTTTTC	+
Preference number: 5 (lower is better) Translates to: IQILLKFGQFSPYILPHIQGEII*SIAEFF Trigger: GAAAAATTCCGCTATGCTCAAGATGATTTCTCCTTG...GATATGAGGTAGAATATAGGGGGAAAACTGCCCAAATTTCAGTAGGATTTGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS-3UTR CAA 90 bp	CTCCTACCACAATTTCTATCCATCCCAAATAACCAATTTTCCCTAATTAACTCATTGGGGTTGACATTCTaGGTGTACTCAACCTTTTTA	+
Preference number: 5 (lower is better) Translates to: LLPQFLSIPNNQFSLINSLGLTF*VYSTFL Trigger: TAAAAAGGTTGAGTACACCAAGAATGTCAACCCCAA...TGAGTTAATTAGGGAAAATTGGTTATTTGGGATGGATAGAAATTGTGGTAGGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000112851.8
CDS CAA 72 bp	GCGGCGCATTGGGCCTGGGCTTTTAGCAGATGTCTTTaGAGGTGTTGGGGAAGCCTTTGGGCCAGCTGCGGC	+
Preference number: 6 (lower is better) Translates to: AAHWAWAFSRCL*RCWGSLWASCG Trigger: GCCGCAGCTGGCCCAAAGGCTTCCCCAACACCTCAAAAGACATCTGCTAAAAGCCCAGGCCCAATGCGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS CAA 90 bp	AGACTTGCTGCGGCGCATTGGGCCTGGGCTTTTAGCAGATGTCTTTaGAGGTGTTGGGGAAGCCTTTGGGCCAGCTGCGGCAGATGGATT	+
Preference number: 6 (lower is better) Translates to: RLAAAHWAWAFSRCL*RCWGSLWASCGRWI Trigger: AATCCATCTGCCGCAGCTGGCCCAAAGGCTTCCCCAACACCTCAAAAGACATCTGCTAAAAGCCCAGGCCCAATGCGCCGCAGCAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS TCA 72 bp	ACTGCTGGAAGTTCCATTTGCGTCTTGGTCGTTACCTaGGTCAGCTGGAGACTTGCTGCGGCGCATTGGGCC	+
Preference number: 6 (lower is better) Translates to: TAGSSICVLVVT*VSWRLAAAHWA Trigger: GGCCCAATGCGCCGCAGCAAGTCTCCAGCTGACTCAGGTAACGACCAAGACGCAAATGGAACTTCCAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS GCA 72 bp	GAGTCATCCAATGACAGCGGCAGGTACAGGTCCTTGTaGTTCCGCAGACTTCCAGGGCTTGTGGGTGTAGAG	+
Preference number: 6 (lower is better) Translates to: ESSNDSGRYRSL*FRRLPGLVGVE Trigger: CTCTACACCCACAAGCCCTGGAAGTCTGCGGAAGCACAAGGACCTGTACCTGCCGCTGTCATTGGATGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112851.8 ENSMUST00000112856.3
CDS GCA 72 bp	TCATCCAATGACAGCGGCAGGTACAGGTCTACCTTGTaGTTCCGCAGACTTCCAGGGCTTGTGGGTGTAGAG	+
Preference number: 6 (lower is better) Translates to: SSNDSGRYRSTL*FRRLPGLVGVE Trigger: CTCTACACCCACAAGCCCTGGAAGTCTGCGGAAGCACAAGGTAGACCTGTACCTGCCGCTGTCATTGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10
CDS GCA 72 bp	TGTCTTTTGAGGTGTTGGGGAAGCCTTTGGGCCAGCTaGGGCAGATGGATTCCCTTTCATGACTCTGCATTC	+
Preference number: 6 (lower is better) Translates to: CLLRCWGSLWAS*GRWIPFHDSAF Trigger: GAATGCAGAGTCATGAAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGGCTTCCCCAACACCTCAAAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS CCA 72 bp	AGGTGTTGGGGAAGCCTTTGGGCCAGCTGCGGCAGATaGATTCCCTTTCATGACTCTGCATTCATTCTCATC	+
Preference number: 6 (lower is better) Translates to: RCWGSLWASCGR*IPFHDSAFILI Trigger: GATGAGAATGAATGCAGAGTCATGAAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGGCTTCCCCAACACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS CCA 72 bp	TTTAGCAGATGTCTTTTGAGGTGTTGGGGAAGCCTTTaGGCCAGCTGCGGCAGATGGATTCCCTTTCATGAC	+
Preference number: 6 (lower is better) Translates to: FSRCLLRCWGSL*ASCGRWIPFHD Trigger: GTCATGAAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGGCTTCCCCAACACCTCAAAAGACATCTGCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS TCA 72 bp	CCTTTGGGCCAGCTGCGGCAGATGGATTCCCTTTCATaGCTCTGCATTCATTCTCATCCAAGGAGAAATCAT	+
Preference number: 6 (lower is better) Translates to: PLGQLRQMDSLS*LCIHSHPRRNH Trigger: ATGATTTCTCCTTGGATGAGAATGAATGCAGAGTCATGAAAGGGAATCCATCTGCCGCAGCTGGCCCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS TCA 72 bp	GAGATAGGAGACTGCTTTGACTTAGGTGTTGAGAGCTaGCTGCTGGAAGTTCCATTTGCTGAGTCAGCTGGA	+
Preference number: 6 (lower is better) Translates to: EIGDCFDLGVES*LLEVPFAESAG Trigger: TCCAGCTGACTCAGCAAATGGAACTTCCAGCAGTCAGCTCTCAACACCTAAGTCAAAGCAGTCTCCTATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112856.3
CDS CCA 72 bp	CCCCTTCTTCCAGTTCATCCATGCTTCCAATCTTCCTaGATCCGTCAATGGTATAAATGTAGCGCACTCCCT	+
Preference number: 6 (lower is better) Translates to: PLLPVHPCFQSS*IRQWYKCSALP Trigger: AGGGAGTGCGCTACATTTATACCATTGACGGATCCAGGAAGATTGGAAGCATGGATGAACTGGAAGAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS TCA 72 bp	GAGATAGGAGACTGCTTTGACTTAGGTGTTGAGAGCTaGCTGCTGGAAGTTCCATTTGCGTCTTGGTCGTTA	+
Preference number: 6 (lower is better) Translates to: EIGDCFDLGVES*LLEVPFASWSL Trigger: TAACGACCAAGACGCAAATGGAACTTCCAGCAGTCAGCTCTCAACACCTAAGTCAAAGCAGTCTCCTATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8
CDS GCA 72 bp	AGCAGACATAGCTTTCCCCTTCTTCCAGTTCATCCATaGTTCCAATCTTCCTGGATCCGTCAATGGTATAAA	+
Preference number: 6 (lower is better) Translates to: SRHSFPLLPVHP*FQSSWIRQWYK Trigger: TTTATACCATTGACGGATCCAGGAAGATTGGAAGCATGGATGAACTGGAAGAAGGGGAAAGCTATGTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS CAA 90 bp	CCCTTTCATGACTCTGCATTCATTCTCATCCAAGGAGAAATCATCTaGAGCATAGCGGAATTTTTCAGGACCACAAGCAATGAACACATC	+
Preference number: 6 (lower is better) Translates to: PFHDSAFILIQGEII*SIAEFFRTTSNEHI Trigger: GATGTGTTCATTGCTTGTGGTCCTGAAAAATTCCGCTATGCTCAAGATGATTTCTCCTTGGATGAGAATGAATGCAGAGTCATGAAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3
CDS TCA 72 bp	ATTCTTGGTGTACTCAACCTTTTTAAAGAAGTTGTCTaGGGAGCAGACATAGCTTTCCCCTTCTTCCAGTTC	+
Preference number: 6 (lower is better) Translates to: ILGVLNLFKEVV*GADIAFPFFQF Trigger: GAACTGGAAGAAGGGGAAAGCTATGTCTGCTCCTCAGACAACTTCTTTAAAAAGGTTGAGTACACCAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033642.10 ENSMUST00000087313.10 ENSMUST00000112851.8 ENSMUST00000112856.3

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu