Pregenerated sensors for DCUN1D5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032002Ensembl transcript IDs: ENSMUST00000034499.10, ENSMUST00000215683.2, ENSMUST00000215818.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTTCATAACAACCTTCAGTTGGAGCCCTTCCCACACTATTAGCTaGTATCAGAAAAACAGGATCCTACAAGTCAAGGTTACTATGTTT | + |
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Preference number: 1 (lower is better) Translates to: LFITTFSWSPSHTIS*YQKNRILQVKVTMF Trigger: AAACATAGTAACCTTGACTTGTAGGATCCTGTTTTTCTGATAGCAGCTAATAGTGTGGGAAGGGCTCCAACTGAAGGTTGTTATGAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR TCA 90 bp | AGAGGTTGCAAATGTTTACCACCAGAGCCAAGTGGGCCATTTAAATaGGGTTTCAGTATTTGTGTTTTCAAAATGTATGGAAAGTATGAC | + |
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Preference number: 1 (lower is better) Translates to: RGCKCLPPEPSGPFK*GFSICVFKMYGKYD Trigger: GTCATACTTTCCATACATTTTGAAAACACAAATACTGAAACCTCATTTAAATGGCCCACTTGGCTCTGGTGGTAAACATTTGCAACCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| 3UTR-3UTR GCA 90 bp | CTCATACTTCCTTATAGTTCTCTTCTTCTCCAGTGTGTATCAAACCAAGTCTACACTCTGCCTCCTCTCTaGATTGTCTTCACAAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LILPYSSLLLQCVSNQVYTLPPL*IVFTRF Trigger: AAACCTTGTGAAGACAATGCAGAGAGGAGGCAGAGT...GTAGACTTGGTTTGATACACACTGGAGAAGAAGAGAACTATAAGGAAGTATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR-3UTR GCA 90 bp | CTAATTATGCAAAGAGGAATTATTAGTAGCCACACCGTTGGCAAGTTATACTCTACCCTTTCTGTACTCTaGCTCCTCTCTGCATTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LIMQRGIISSHTVGKLYSTLSVL*LLSALS Trigger: AGACAATGCAGAGAGGAGGCAGAGTACAGAAAGGGT...AGAGTATAACTTGCCAACGGTGTGGCTACTAATAATTCCTCTTTGCATAATTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR-3UTR CCA 90 bp | TCTACAATACTGAAGCTCAAGTATTCTGAAATCAGACAAAGTGCTCTCAGCAAAGTCTCAGAAGACATGTaGCTCAATGCCCATCACATG | + |
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Preference number: 2 (lower is better) Translates to: STILKLKYSEIRQSALSKVSEDM*LNAHHM Trigger: CATGTGATGGGCATTGAGCCACATGTCTTCTGAGAC...TTTGCTGAGAGCACTTTGTCTGATTTCAGAATACTTGAGCTTCAGTATTGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR-3UTR TCA 90 bp | GAACAGCACAAAGCAAATGCCTACTACCTGATGACCACTAAAATAGGTTTTATAAGTGGGCCATTTAAATaGGGTTTCAGTATTTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: EQHKANAYYLMTTKIGFISGPFK*GFSICV Trigger: AACACAAATACTGAAACCTCATTTAAATGGCCCACT...TATAAAACCTATTTTAGTGGTCATCAGGTAGTAGGCATTTGCTTTGTGCTGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| 3UTR GCA 72 bp | GTGAAAATGCACCCTTTCTGTACTCTGCCTCCTCTCTaGATTGTCTTCACAAGGTTTGCATTGTCTTCACGA | + |
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Preference number: 3 (lower is better) Translates to: VKMHPFCTLPPL*IVFTRFALSSR Trigger: TCGTGAAGACAATGCAAACCTTGTGAAGACAATGCAGAGAGGAGGCAGAGTACAGAAAGGGTGCATTTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR GCA 72 bp | ACAACCTTCAGTTGGAGCCCTTCCCACACTATTAGCTaGTATCAGAAAAACAGGATCCTACAAGTCAAGGTT | + |
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Preference number: 3 (lower is better) Translates to: TTFSWSPSHTIS*YQKNRILQVKV Trigger: AACCTTGACTTGTAGGATCCTGTTTTTCTGATAGCAGCTAATAGTGTGGGAAGGGCTCCAACTGAAGGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGTATTCTGAAATCAGACAAAGTGCTCTCAGCAAATCCATATAGCTTCATGCATAACAACCTTCAGTaGGAGCCCTTCCCACACTAT | + |
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Preference number: 3 (lower is better) Translates to: SSILKSDKVLSANPYSFMHNNLQ*EPFPHY Trigger: ATAGTGTGGGAAGGGCTCCAACTGAAGGTTGTTATG...CATGAAGCTATATGGATTTGCTGAGAGCACTTTGTCTGATTTCAGAATACTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR-3UTR CAA 90 bp | CTCATACTTCCTTATAGTTCTCTTCTTCTCCAGTGTGTATCAAACCAAGTCTACTTGTCTTCACAAGGTTaGCATTGTCTTCACGACAGT | + |
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Preference number: 3 (lower is better) Translates to: LILPYSSLLLQCVSNQVYLSSQG*HCLHDS Trigger: ACTGTCGTGAAGACAATGCAAACCTTGTGAAGACAA...GTAGACTTGGTTTGATACACACTGGAGAAGAAGAGAACTATAAGGAAGTATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR-3UTR CAA 90 bp | AAATCAGACAAAGTGCTCTCAGCAAATCCATATAGCTTCATGGCTAAAAACACATTCACAAGGTTTGCATaGTCTTCACGACAGTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: KSDKVLSANPYSFMAKNTFTRFA*SSRQFL Trigger: CAAGAACTGTCGTGAAGACAATGCAAACCTTGTGAA...TGTGTTTTTAGCCATGAAGCTATATGGATTTGCTGAGAGCACTTTGTCTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR TCA 72 bp | AAATGTTTACCACCAGAGCCAAGTGGGCCATTTAAATaGGGTTTCAGTATTTGTGTTTTCAAAATGTATGGA | + |
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Preference number: 3 (lower is better) Translates to: KCLPPEPSGPFK*GFSICVFKMYG Trigger: TCCATACATTTTGAAAACACAAATACTGAAACCTCATTTAAATGGCCCACTTGGCTCTGGTGGTAAACATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| 3UTR TCA 72 bp | TCAAACCAAGTCTACAATACTGAAGCTCAAGTATTCTaGAATCAGACAAAGTGCTCTCAGCAAATCCATATA | + |
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Preference number: 3 (lower is better) Translates to: SNQVYNTEAQVF*NQTKCSQQIHI Trigger: TATATGGATTTGCTGAGAGCACTTTGTCTGATTTCAGAATACTTGAGCTTCAGTATTGTAGACTTGGTTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR TCA 72 bp | TTTCTTTCTACTTATACAATGGAACAAGTACTAATATaGATGGAGCTCAGGTTTTGGGTCTCAAGAGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: FLSTYTMEQVLI*MELRFWVSRVF Trigger: GAAAACTCTTGAGACCCAAAACCTGAGCTCCATTCATATTAGTACTTGTTCCATTGTATAAGTAGAAAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR GCA 90 bp | CTTTCTGTACTCTGCCTCCTCTCTGCATTGTCTTCACAAGGTTTGCATTGTCTTCAGGAGGCTGGGATCTaGAATAGCTGGGGATTTTAC | + |
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Preference number: 4 (lower is better) Translates to: LSVLCLLSALSSQGLHCLQEAGI*NSWGFY Trigger: GTAAAATCCCCAGCTATTGCAGATCCCAGCCTCCTG...AAGACAATGCAAACCTTGTGAAGACAATGCAGAGAGGAGGCAGAGTACAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR TCA 90 bp | TCTCAGAAGACATGTGGCTCAATGCCCATCACATGTAACAAGAAAACTTCCTTTGGATTTTACACTTTTTaGGGCCCGCGTCTTCCGCGA | + |
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Preference number: 4 (lower is better) Translates to: SQKTCGSMPITCNKKTSFGFYTF*GPRLPR Trigger: TCGCGGAAGACGCGGGCCTCAAAAAGTGTAAAATCC...AAAGGAAGTTTTCTTGTTACATGTGATGGGCATTGAGCCACATGTCTTCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| 3UTR CAA 72 bp | AAATGCACCCTTTCTGTACTCTGCCTCCTCTCTGCATaGTCTTCACAAGGTTTGCATTGTCTTCACGACAGT | + |
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Preference number: 4 (lower is better) Translates to: KCTLSVLCLLSA*SSQGLHCLHDS Trigger: ACTGTCGTGAAGACAATGCAAACCTTGTGAAGACAATGCAGAGAGGAGGCAGAGTACAGAAAGGGTGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR TCA 90 bp | GCCACACAAGACTTTATTCTAAAAACGGGACACAGTAAAAAGAACAGCACAAAGCTTGGTTCCAACCTCTaGAACAAGCACCGTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: ATQDFILKTGHSKKNSTKLGSNL*NKHRLH Trigger: ATGAAGACGGTGCTTGTTTCAGAGGTTGGAACCAAG...CTTTGTGCTGTTCTTTTTACTGTGTCCCGTTTTTAGAATAAAGTCTTGTGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS-3UTR CCA 90 bp | GCCACACAAGACTTTATTCTAAAAACGGGACACAGTAAAAAGAACAGCACAAAGGTGTGGACTGCCAACTaGAGAGCAAGTTCAACACAA | + |
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Preference number: 4 (lower is better) Translates to: ATQDFILKTGHSKKNSTKVWTAN*RASSTQ Trigger: TTGTGTTGAACTTGCTCTCCAGTTGGCAGTCCACAC...CTTTGTGCTGTTCTTTTTACTGTGTCCCGTTTTTAGAATAAAGTCTTGTGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS-3UTR TCA 90 bp | CCTTCATACAGGGAACAAAGTAAATGGCCTTATGAGGTGTACAATTCCATCAAGCAGGCACTTCTTTCTTaGAAAATCTTCCTCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: PSYREQSKWPYEVYNSIKQALLS*KIFLST Trigger: AGTGGAGAGGAAGATTTTTCAAGAAAGAAGTGCCTG...CTTGATGGAATTGTACACCTCATAAGGCCATTTACTTTGTTCCCTGTATGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGTACTCTGCCTCCTCTCTGCATTGTCTTCACAAGGTTTGCATTGTCTTCCATGAACTGTTCTGCTaGATTCTAATACATTGTACC | + |
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Preference number: 4 (lower is better) Translates to: FLYSASSLHCLHKVCIVFHELFC*ILIHCT Trigger: GGTACAATGTATTAGAATTCAGCAGAACAGTTCATG...GAAGACAATGCAAACCTTGTGAAGACAATGCAGAGAGGAGGCAGAGTACAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR CCA 90 bp | TCTCAGAAGACATGTGGCTCAATGCCCATCACATGTAACAAGAAAACTTCCTTTTTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: SQKTCGSMPITCNKKTSFFFHSF*PYNFIR Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...AAAGGAAGTTTTCTTGTTACATGTGATGGGCATTGAGCCACATGTCTTCTGAGA 41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR TCA 90 bp | TCTCAGAAGACATGTGGCTCAATGCCCATCACATGTAACAAGAAAACTTCCTTTGTACTGGTAAAATACTaGAAAGAGTGGCCATGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SQKTCGSMPITCNKKTSFVLVKY*KEWPCS Trigger: AGAACATGGCCACTCTTTTCAGTATTTTACCAGTAC...AAAGGAAGTTTTCTTGTTACATGTGATGGGCATTGAGCCACATGTCTTCTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR TCA 90 bp | CCTTCATACAGGGAACAAAGTAAATGGCCTTATGAGGTGTACAATTCCATCAAGATATCAAGGCTTCTCTaGTCTTTATCCCTTGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: PSYREQSKWPYEVYNSIKISRLL*SLSLAK Trigger: TTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATAT...CTTGATGGAATTGTACACCTCATAAGGCCATTTACTTTGTTCCCTGTATGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR TCA 90 bp | AATATTCAGTCTCAGAAGACATGTGGCTCAATGCCCATCACATGTAACAAGAAATTACTAAGATCGGCATaGACTGTTCTGCTGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: NIQSQKTCGSMPITCNKKLLRSA*TVLLNS Trigger: AGAATTCAGCAGAACAGTTCATGCCGATCTTAGTAA...TTTCTTGTTACATGTGATGGGCATTGAGCCACATGTCTTCTGAGACTGAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR CCA 90 bp | ATTAAGAAGTATGAGCATTTGTTAAGGAGGAGTGGCCACACAAGACTTTATTCTAGTAAATGGCAATATTaGAACACTGTGTGGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: IKKYEHLLRRSGHTRLYSSKWQY*NTVWTA Trigger: GGCAGTCCACACAGTGTTCCAATATTGCCATTTACT...AGAATAAAGTCTTGTGTGGCCACTCCTCCTTAACAAATGCTCATACTTCTTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS-3UTR CCA 90 bp | GAACAGCACAAAGCAAATGCCTACTACCTGATGACCACTAAAATAGGTTTTATACCATACAAAAACAGCTaGGCAGGCAAAGCAGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: EQHKANAYYLMTTKIGFIPYKNS*AGKAVN Trigger: ATTTACTGCTTTGCCTGCCCAGCTGTTTTTGTATGG...TATAAAACCTATTTTAGTGGTCATCAGGTAGTAGGCATTTGCTTTGTGCTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS-3UTR TCA 90 bp | GAACAGCACAAAGCAAATGCCTACTACCTGATGACCACTAAAATAGGTTTTATATTACTAAGATCGGCATaGACTGTTCTGCTGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: EQHKANAYYLMTTKIGFILLRSA*TVLLNS Trigger: AGAATTCAGCAGAACAGTTCATGCCGATCTTAGTAA...TATAAAACCTATTTTAGTGGTCATCAGGTAGTAGGCATTTGCTTTGTGCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS-3UTR GCA 90 bp | TCTACAATACTGAAGCTCAAGTATTCTGAAATCAGACAAAGTGCTCTCAGCAAATCTGTAACTTTTCTGTaGAGTCACACTGTAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: STILKLKYSEIRQSALSKSVTFL*SHTVMR Trigger: CCTCATTACAGTGTGACTGCACAGAAAAGTTACAGA...TTTGCTGAGAGCACTTTGTCTGATTTCAGAATACTTGAGCTTCAGTATTGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR GCA 90 bp | CCTTCATACAGGGAACAAAGTAAATGGCCTTATGAGGTGTACAATTCCATCAAGCTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT | + |
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Preference number: 4 (lower is better) Translates to: PSYREQSKWPYEVYNSIKLIFIP*KIKGIS Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...CTTGATGGAATTGTACACCTCATAAGGCCATTTACTTTGTTCCCTGTATGAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR CCA 90 bp | GAACAGCACAAAGCAAATGCCTACTACCTGATGACCACTAAAATAGGTTTTATAAGGCAAAGCAGTAAATaGCAATATTGGAACACTGTG | + |
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Preference number: 4 (lower is better) Translates to: EQHKANAYYLMTTKIGFIRQSSK*QYWNTV Trigger: CACAGTGTTCCAATATTGCCATTTACTGCTTTGCCT...TATAAAACCTATTTTAGTGGTCATCAGGTAGTAGGCATTTGCTTTGTGCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS-3UTR TCA 90 bp | ATTAAGAAGTATGAGCATTTGTTAAGGAGGAGTGGCCACACAAGACTTTATTCTATATCAAGGCTTCTCTaGTCTTTATCCCTTGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: IKKYEHLLRRSGHTRLYSISRLL*SLSLAK Trigger: TTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATAT...AGAATAAAGTCTTGTGTGGCCACTCCTCCTTAACAAATGCTCATACTTCTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS-3UTR TCA 90 bp | GAACAGCACAAAGCAAATGCCTACTACCTGATGACCACTAAAATAGGTTTTATACATGAACTGTTCTGCTaGATTCTAATACATTGTACC | + |
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Preference number: 4 (lower is better) Translates to: EQHKANAYYLMTTKIGFIHELFC*ILIHCT Trigger: GGTACAATGTATTAGAATTCAGCAGAACAGTTCATG...TATAAAACCTATTTTAGTGGTCATCAGGTAGTAGGCATTTGCTTTGTGCTGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS-3UTR GCA 90 bp | GAACAGCACAAAGCAAATGCCTACTACCTGATGACCACTAAAATAGGTTTTATACTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT | + |
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Preference number: 4 (lower is better) Translates to: EQHKANAYYLMTTKIGFILIFIP*KIKGIS Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...TATAAAACCTATTTTAGTGGTCATCAGGTAGTAGGCATTTGCTTTGTGCTGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS CCA 90 bp | CAGCTGGGCAGGCAAAGCAGTAAATGGCAATATTGGAACACTGTGTaGACTGCCAACTGGAGAGCAAGTTCAACACAAGCCACTACTTGG | + |
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Preference number: 5 (lower is better) Translates to: QLGRQSSKWQYWNTV*TANWRASSTQATTW Trigger: CCAAGTAGTGGCTTGTGTTGAACTTGCTCTCCAGTTGGCAGTCCACACAGTGTTCCAATATTGCCATTTACTGCTTTGCCTGCCCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS GCA 90 bp | CCCTTTCTGTACTCTGCCTCCTCTCTGCATTGTCTTCACAAGGTTTaGATTGTCTTCACGACAGTTCTTGCTATGATGTTTGACGGATTT | + |
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Preference number: 5 (lower is better) Translates to: PFLYSASSLHCLHKV*IVFTTVLAMMFDGF Trigger: AAATCCGTCAAACATCATAGCAAGAACTGTCGTGAAGACAATGCAAACCTTGTGAAGACAATGCAGAGAGGAGGCAGAGTACAGAAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034499.10 |
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| CDS-3UTR CAA 90 bp | AAATCAGACAAAGTGCTCTCAGCAAATCCATATAGCTTCATGGCTAAAAACACAGGGATTTTACACTTTTaGAGGCCCGCGTCTTCCGCG | + |
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Preference number: 5 (lower is better) Translates to: KSDKVLSANPYSFMAKNTGILHF*RPASSA Trigger: CGCGGAAGACGCGGGCCTCAAAAAGTGTAAAATCCC...TGTGTTTTTAGCCATGAAGCTATATGGATTTGCTGAGAGCACTTTGTCTGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR CAA 90 bp | TCTCAGAAGACATGTGGCTCAATGCCCATCACATGTAACAAGAAAACTTCCTTTTCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC | + |
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Preference number: 5 (lower is better) Translates to: SQKTCGSMPITCNKKTSFSDLYP*QNQRHI Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...AAAGGAAGTTTTCTTGTTACATGTGATGGGCATTGAGCCACATGTCTTCTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS-3UTR CAA 90 bp | GCCACACAAGACTTTATTCTAAAAACGGGACACAGTAAAAAGAACAGCACAAAGTCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC | + |
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Preference number: 5 (lower is better) Translates to: ATQDFILKTGHSKKNSTKSDLYP*QNQRHI Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...CTTTGTGCTGTTCTTTTTACTGTGTCCCGTTTTTAGAATAAAGTCTTGTGTGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS-3UTR CAA 90 bp | GTAAATGGCCTTATGAGGTGTACAATTCCATCAAGTCTCTCATACTTCCTTATATGTTTGACGGATTTTTaGCCACTCAACAAATTCATC | + |
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Preference number: 5 (lower is better) Translates to: VNGLMRCTIPSSLSYFLICLTDF*PLNKFI Trigger: GATGAATTTGTTGAGTGGCAAAAAATCCGTCAAACA...TATAAGGAAGTATGAGAGACTTGATGGAATTGTACACCTCATAAGGCCATTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215683.2 |
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| CDS GCA 72 bp | ACACTTTTTGAGGCCCGCGTCTTCCGCGACCGCCGCTaGCACTCCGGGAGCTTTTCTCTTCTTCTTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: TLFEARVFRDRR*HSGSFSLLLHW Trigger: CCAGTGAAGAAGAAGAGAAAAGCTCCCGGAGTGGCAGCGGCGGTCGCGGAAGACGCGGGCCTCAAAAAGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034499.10 ENSMUST00000215683.2 |
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| CDS TCA 72 bp | CAAGAAGAACAGGCCCTCCAGGTACTGGTAAAATACTaGAAAGAGTGGCCATGTTCTCCCAAGCAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: QEEQALQVLVKY*KEWPCSPKQQS Trigger: GCTCTGCTGCTTGGGAGAACATGGCCACTCTTTTCAGTATTTTACCAGTACCTGGAGGGCCTGTTCTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034499.10 |
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| CDS CCA 72 bp | GCCAACTGGAGAGCAAGTTCAACACAAGCCACTACTTaGTTCCAACCTCTGAAACAAGCACCGTCTTCATCG | + |
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Preference number: 6 (lower is better) Translates to: ANWRASSTQATT*FQPLKQAPSSS Trigger: CGATGAAGACGGTGCTTGTTTCAGAGGTTGGAACCAAGTAGTGGCTTGTGTTGAACTTGCTCTCCAGTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS CCA 72 bp | AAACAGCTGGGCAGGCAAAGCAGTAAATGGCAATATTaGAACACTGTGTGGACTGCCAACTGGAGAGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: KQLGRQSSKWQY*NTVWTANWRAS Trigger: ACTTGCTCTCCAGTTGGCAGTCCACACAGTGTTCCAATATTGCCATTTACTGCTTTGCCTGCCCAGCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS CAA 72 bp | TGCCAACTGGAGAGCAAGTTCAACACAAGCCACTACTaGGTTCCAACCTCTGAAACAAGCACCGTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: CQLESKFNTSHY*VPTSETSTVFI Trigger: GATGAAGACGGTGCTTGTTTCAGAGGTTGGAACCAAGTAGTGGCTTGTGTTGAACTTGCTCTCCAGTTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS CAA 90 bp | TGTGTGGACTGCCAACTGGAGAGCAAGTTCAACACAAGCCACTACTaGGTTCCAACCTCTGAAACAAGCACCGTCTTCATCGTAGTTACT | + |
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Preference number: 6 (lower is better) Translates to: CVDCQLESKFNTSHY*VPTSETSTVFIVVT Trigger: AGTAACTACGATGAAGACGGTGCTTGTTTCAGAGGTTGGAACCAAGTAGTGGCTTGTGTTGAACTTGCTCTCCAGTTGGCAGTCCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS CCA 72 bp | AGGCAAAGCAGTAAATGGCAATATTGGAACACTGTGTaGACTGCCAACTGGAGAGCAAGTTCAACACAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RQSSKWQYWNTV*TANWRASSTQA Trigger: GGCTTGTGTTGAACTTGCTCTCCAGTTGGCAGTCCACACAGTGTTCCAATATTGCCATTTACTGCTTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS CCA 72 bp | ACCATACAAAAACAGCTGGGCAGGCAAAGCAGTAAATaGCAATATTGGAACACTGTGTGGACTGCCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: TIQKQLGRQSSK*QYWNTVWTANW Trigger: CCAGTTGGCAGTCCACACAGTGTTCCAATATTGCCATTTACTGCTTTGCCTGCCCAGCTGTTTTTGTATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS CCA 72 bp | AAATGGCAATATTGGAACACTGTGTGGACTGCCAACTaGAGAGCAAGTTCAACACAAGCCACTACTTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: KWQYWNTVWTAN*RASSTQATTWF Trigger: GAACCAAGTAGTGGCTTGTGTTGAACTTGCTCTCCAGTTGGCAGTCCACACAGTGTTCCAATATTGCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215818.2 |
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| CDS CAA 72 bp | GTACTCTGCCTCCTCTCTGCATTGTCTTCACAAGGTTaGCATTGTCTTCACGACAGTTCTTGCTATGATGTT | + |
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Preference number: 6 (lower is better) Translates to: VLCLLSALSSQG*HCLHDSSCYDV Trigger: AACATCATAGCAAGAACTGTCGTGAAGACAATGCAAACCTTGTGAAGACAATGCAGAGAGGAGGCAGAGTAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034499.10 |
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| CDS TCA 72 bp | TGCATACTCATAAAACCAAGCCAGGCACTTCTTTCTTaGAAAATCTTCCTCTCCACTGATGAGTCTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CILIKPSQALLS*KIFLSTDESSR Trigger: CCTGCTAGACTCATCAGTGGAGAGGAAGATTTTTCAAGAAAGAAGTGCCTGGCTTGGTTTTATGAGTATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034499.10 ENSMUST00000215683.2 |
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| CDS GCA 72 bp | TACTCTGCCTCCTCTCTGCATTGTCTTCACAAGGTTTaGATTGTCTTCACGACAGTTCTTGCTATGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: YSASSLHCLHKV*IVFTTVLAMMF Trigger: AAACATCATAGCAAGAACTGTCGTGAAGACAATGCAAACCTTGTGAAGACAATGCAGAGAGGAGGCAGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034499.10 |
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