Pregenerated sensors for DCUN1D4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051674Ensembl transcript IDs: ENSMUST00000063882.12, ENSMUST00000087181.12, ENSMUST00000113558.8, ENSMUST00000133137.5, ENSMUST00000134092.9
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCAGGGCGGCCCATTCAATAGCAAACACCGAGACACGCCTGCCTaGAAGAGGCTGGCGGTGCAAGAAAAGCAGCATGCGCTTCCATAC | + |
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Preference number: 1 (lower is better) Translates to: KQGGPFNSKHRDTPA*KRLAVQEKQHALPY Trigger: GTATGGAAGCGCATGCTGCTTTTCTTGCACCGCCAGCCTCTTGCAGGCAGGCGTGTCTCGGTGTTTGCTATTGAATGGGCCGCCCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR GCA 90 bp | CCAGCAAACCAGGAGGCTCATGAGGGTGGGTGGCAAAGGACGGTTTaGACAGTGGCACAGAGAGCTTCAGCAGACCAAGCACTGCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: PANQEAHEGGWQRTV*TVAQRASADQALLE Trigger: CTCTAGCAGTGCTTGGTCTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCCTTTGCCACCCACCCTCATGAGCCTCCTGGTTTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR CCA 90 bp | TTTGCAGTCATGCCGCCAGCAAACCAGGAGGCTCATGAGGGTGGGTaGCAAAGGACGGTTTGCACAGTGGCACAGAGAGCTTCAGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: FAVMPPANQEAHEGG*QRTVCTVAQRASAD Trigger: GTCTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCCTTTGCCACCCACCCTCATGAGCCTCCTGGTTTGCTGGCGGCATGACTGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR TCA 90 bp | TTCAAAGTGCTTTGCAGTCATGCCGCCAGCAAACCAGGAGGCTCATaGGGGTGGGTGGCAAAGGACGGTTTGCACAGTGGCACAGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: FKVLCSHAASKPGGS*GWVAKDGLHSGTES Trigger: GCTCTCTGTGCCACTGTGCAAACCGTCCTTTGCCACCCACCCTCATGAGCCTCCTGGTTTGCTGGCGGCATGACTGCAAAGCACTTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR CCA 90 bp | AACAGGGTTAGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGCAATaGACGCGTGGCCAGGAGAAGCCCAGCACGGGTGAAACAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: NRVSSMLVVSVHCLQ*TRGQEKPSTGETKT Trigger: TGTCTTTGTTTCACCCGTGCTGGGCTTCTCCTGGCCACGCGTCCATTGCAGGCAGTGGACTGAAACCACCAGCATCGAGCTAACCCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR CCA 90 bp | GCCCATTCAATAGCAAACACCGAGACACGCCTGCCTGCAAGAGGCTaGCGGTGCAAGAAAAGCAGCATGCGCTTCCATACAGACAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: AHSIANTETRLPARG*RCKKSSMRFHTDSS Trigger: ACTGCTGTCTGTATGGAAGCGCATGCTGCTTTTCTTGCACCGCCAGCCTCTTGCAGGCAGGCGTGTCTCGGTGTTTGCTATTGAATGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR TCA 90 bp | TGGTTTCTCATCCACATAATGGCTACTACCACCCTTCTGTACCTGTaGCTCAGGGAATGGCAAGCGGCCCCTCCGAGAAAGGTCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: WFLIHIMATTTLLYL*LREWQAAPPRKVPV Trigger: CACTGGGACCTTTCTCGGAGGGGCCGCTTGCCATTCCCTGAGTCACAGGTACAGAAGGGTGGTAGTAGCCATTATGTGGATGAGAAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR GCA 90 bp | TCAATAGCAAACACCGAGACACGCCTGCCTGCAAGAGGCTGGCGGTaGAAGAAAAGCAGCATGCGCTTCCATACAGACAGCAGTTTATGG | + |
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Preference number: 1 (lower is better) Translates to: SIANTETRLPARGWR*KKSSMRFHTDSSLW Trigger: CCATAAACTGCTGTCTGTATGGAAGCGCATGCTGCTTTTCTTGCACCGCCAGCCTCTTGCAGGCAGGCGTGTCTCGGTGTTTGCTATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR GCA 90 bp | GTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTGAAAACGAACTaGAGAGCAGCCTCCAAGAGAACAATGCTACATCAAGCAGGGCGG | + |
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Preference number: 1 (lower is better) Translates to: VRTLANSPICSVKTN*RAASKRTMLHQAGR Trigger: CCGCCCTGCTTGATGTAGCATTGTTCTCTTGGAGGCTGCTCTGCAGTTCGTTTTCACACTACAGATTGGTGAATTTGCCAACGTCCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR GCA 90 bp | AGAGTAACTAAAATCTCAAGCATAGTTCAAAGTGCTTTGCAGTCATaGCGCCAGCAAACCAGGAGGCTCATGAGGGTGGGTGGCAAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: RVTKISSIVQSALQS*RQQTRRLMRVGGKG Trigger: TCCTTTGCCACCCACCCTCATGAGCCTCCTGGTTTGCTGGCGGCATGACTGCAAAGCACTTTGAACTATGCTTGAGATTTTAGTTACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR GCA 90 bp | GTCATAGCACCACATGGTTGGGGAAACCTGTTAACTGTGTACTTCTaGACGAGGGGCAAGGCAAGCAAGCAAGCAGATGCAAACCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: VIAPHGWGNLLTVYF*TRGKASKQADANLK Trigger: TTTAAGGTTTGCATCTGCTTGCTTGCTTGCCTTGCCCCTCGTGCAGAAGTACACAGTTAACAGGTTTCCCCAACCATGTGGTGCTATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR CCA 90 bp | TGTCAAGGAAACCAAGTCATATTTGGCTTATGCCACAGTAAGTCATaGCTCCTACTTCTTCCAGAAGTTGGCCTCTTAAGCAATGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: CQGNQVIFGLCHSKS*LLLLPEVGLLSNEV Trigger: AACCTCATTGCTTAAGAGGCCAACTTCTGGAAGAAGTAGGAGCCATGACTTACTGTGGCATAAGCCAAATATGACTTGGTTTCCTTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTACTACCACCCTTCTGTACCTGTGACTCAGGGAATGGCAAGCGGCCCCTCCGTCCACTGCCTGCAATaGACGCGTGGCCAGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GYYHPSVPVTQGMASGPSVHCLQ*TRGQEK Trigger: CTTCTCCTGGCCACGCGTCCATTGCAGGCAGTGGAC...GGAGGGGCCGCTTGCCATTCCCTGAGTCACAGGTACAGAAGGGTGGTAGTAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTACTACCACCCTTCTGTACCTGTGACTCAGGGAATGGCAAGCGGCCCCTCCAGAAAGGTCCCAGTGTaGACAGGGTTAGCTCGATGC | + |
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Preference number: 2 (lower is better) Translates to: GYYHPSVPVTQGMASGPSRKVPV*TGLARC Trigger: GCATCGAGCTAACCCTGTTCACACTGGGACCTTTCT...GGAGGGGCCGCTTGCCATTCCCTGAGTCACAGGTACAGAAGGGTGGTAGTAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR CAA 90 bp | GTGCAGTGTAAACGGCTGCAAGCTGCATTCCCCAACAAGAGGATGTaGCCGCACCCTGAAACACAAGTGAAGGGAGGAAGGGTGGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VQCKRLQAAFPNKRM*PHPETQVKGGRVAG Trigger: CCCAGCCACCCTTCCTCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGCTTGCAGCCGTTTACACTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR TCA 90 bp | CCACCATCTTGTAGCCATCACCTGCCTGGGCAGGCACGGATCCCTCTATACCATACCCTTCTGTACCTGTaGCTCAGGGAATGGCAAGCG | + |
|
Preference number: 2 (lower is better) Translates to: PPSCSHHLPGQARIPLYHTLLYL*LREWQA Trigger: CGCTTGCCATTCCCTGAGTCACAGGTACAGAAGGGT...ATGGTATAGAGGGATCCGTGCCTGCCCAGGCAGGTGATGGCTACAAGATGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCAGTGTGAACAGGGTTAGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGGGACGGTTTGCACAGTaGCACAGAGAGCTTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GPSVNRVSSMLVVSVHCLGRFAQ*HRELQQ Trigger: CTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCC...CAGGCAGTGGACTGAAACCACCAGCATCGAGCTAACCCTGTTCACACTGGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGACGGTTTGCACAGTGGCACAGAGAGCTTCAGCAGACCAAGCACTGCTAGCAAGAGGCTGGCGGTaGAAGAAAAGCAGCATGCGC | + |
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Preference number: 2 (lower is better) Translates to: QRTVCTVAQRASADQALLARGWR*KKSSMR Trigger: GCGCATGCTGCTTTTCTTGCACCGCCAGCCTCTTGC...TAGCAGTGCTTGGTCTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCAAGAGAACAATGCTACATCAAGCAGGGCGGCCCATTCAATAGCAAACACCGAGACACGCCTGCCTaGAAGAGGCTGGCGGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PPREQCYIKQGGPFNSKHRDTPA*KRLAVQ Trigger: TTGCACCGCCAGCCTCTTGCAGGCAGGCGTGTCTCG...GTGTTTGCTATTGAATGGGCCGCCCTGCTTGATGTAGCATTGTTCTCTTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCACTGTCTCTGTGCTCTGCTCCTGCAATGGACGCGTaGCCAGGAGAAGCCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LKRNCETAVRVALSLCSAPAMDA*PGEAQH Trigger: GTGCTGGGCTTCTCCTGGCCACGCGTCCATTGCAGG...AGCAGAGCACAGAGACAGTGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCCCAGTGTGAACAGGGTTAGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGGAAGCCCAGCACGGGTaGAACAAAGACAGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: GPSVNRVSSMLVVSVHCLEAQHG*NKDRKQ Trigger: TTGTTTCCTGTCTTTGTTTCACCCGTGCTGGGCTTC...CAGGCAGTGGACTGAAACCACCAGCATCGAGCTAACCCTGTTCACACTGGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGTGAGTCATAGCACCACATGGTTGGGGAAACCTGTTAACTGTGTACTTCTGCGAGACACGCCTGCCTaGAAGAGGCTGGCGGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: RVSHSTTWLGKPVNCVLLRDTPA*KRLAVQ Trigger: TTGCACCGCCAGCCTCTTGCAGGCAGGCGTGTCTCG...CAGAAGTACACAGTTAACAGGTTTCCCCAACCATGTGGTGCTATGACTCACTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR TCA 90 bp | CCACCATCTTGTAGCCATCACCTGCCTGGGCAGGCACGGATCCCTCTATACCATCACCAATCTGTAGTGTaGAAACGAACTGCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PPSCSHHLPGQARIPLYHHQSVV*KRTAEQ Trigger: CTGCTCTGCAGTTCGTTTTCACACTACAGATTGGTG...ATGGTATAGAGGGATCCGTGCCTGCCCAGGCAGGTGATGGCTACAAGATGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCAGTGTGAACAGGGTTAGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGAGTGTGAAAACGAACTaGAGAGCAGCCTCCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: GPSVNRVSSMLVVSVHCLSVKTN*RAASKR Trigger: TCTCTTGGAGGCTGCTCTGCAGTTCGTTTTCACACT...CAGGCAGTGGACTGAAACCACCAGCATCGAGCTAACCCTGTTCACACTGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGCAATGGACGCGTGGCCAGGAGGTCATATTTGGCTTATaGCACAGTAAGTCATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: SSMLVVSVHCLQWTRGQEVIFGL*HSKSWL Trigger: GAGCCATGACTTACTGTGGCATAAGCCAAATATGAC...CTCCTGGCCACGCGTCCATTGCAGGCAGTGGACTGAAACCACCAGCATCGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTACTACCACCCTTCTGTACCTGTGACTCAGGGAATGGCAAGCGGCCCCTCCACAGACAGCAGTTTATaGCTAATGGGTGACATAACC | + |
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Preference number: 2 (lower is better) Translates to: GYYHPSVPVTQGMASGPSTDSSL*LMGDIT Trigger: GGTTATGTCACCCATTAGCCATAAACTGCTGTCTGT...GGAGGGGCCGCTTGCCATTCCCTGAGTCACAGGTACAGAAGGGTGGTAGTAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCACTGTCTCTGTGCTCTGCTACCCTTCTGTACCTGTaGCTCAGGGAATGGCAAGCG | + |
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Preference number: 2 (lower is better) Translates to: LKRNCETAVRVALSLCSATLLYL*LREWQA Trigger: CGCTTGCCATTCCCTGAGTCACAGGTACAGAAGGGT...AGCAGAGCACAGAGACAGTGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCATTCCCCAACAAGAGGATGTTGCCGCACCCTGAAACACAAGTGAAGGGATTTGAAAAGGAACTGTaGAACAGCGGTCAGGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: AAFPNKRMLPHPETQVKGFEKEL*NSGQGS Trigger: GCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAA...TCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | GCACTGCTAGAGGAACACAAAGCAGGGAAACAGAGGAAGGTTTATGGAAACGTAGCAAGAGGCTGGCGGTaGAAGAAAAGCAGCATGCGC | + |
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Preference number: 2 (lower is better) Translates to: ALLEEHKAGKQRKVYGNVARGWR*KKSSMR Trigger: GCGCATGCTGCTTTTCTTGCACCGCCAGCCTCTTGC...TACGTTTCCATAAACCTTCCTCTGTTTCCCTGCTTTGTGTTCCTCTAGCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCAGTGTGAACAGGGTTAGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGGTCATATTTGGCTTATaGCACAGTAAGTCATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GPSVNRVSSMLVVSVHCLVIFGL*HSKSWL Trigger: GAGCCATGACTTACTGTGGCATAAGCCAAATATGAC...CAGGCAGTGGACTGAAACCACCAGCATCGAGCTAACCCTGTTCACACTGGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGACGACACAAGGCATTCACAGTTAATAGGCTGGCTGCTGTTCATGTCACAGAGAAAGGTCCCAGTGTaGACAGGGTTAGCTCGATGC | + |
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Preference number: 2 (lower is better) Translates to: TDDTRHSQLIGWLLFMSQRKVPV*TGLARC Trigger: GCATCGAGCTAACCCTGTTCACACTGGGACCTTTCT...CTGTGACATGAACAGCAGCCAGCCTATTAACTGTGAATGCCTTGTGTCGTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCATTCCCCAACAAGAGGATGTTGCCGCACCCTGAAACACAAGTGAAGGGAAAGCATAGTTCAAAGTaGTTTGCAGTCATGCCGCCA | + |
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Preference number: 2 (lower is better) Translates to: AAFPNKRMLPHPETQVKGKHSSK*FAVMPP Trigger: TGGCGGCATGACTGCAAAGCACTTTGAACTATGCTT...TCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCATTCCCCAACAAGAGGATGTTGCCGCACCCTGAAACACAAGTGAAGGGAGTAGCACTGTCTCTGTaGTCTGCTCATTTAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: AAFPNKRMLPHPETQVKGVALSL*SAHLMP Trigger: TGGCATTAAATGAGCAGAGCACAGAGACAGTGCTAC...TCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCATTCCCCAACAAGAGGATGTTGCCGCACCCTGAAACACAAGTGAAGGGACTCGCAGGTTCACTGTaGTTAGTGTTTCAAACACTC | + |
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Preference number: 2 (lower is better) Translates to: AAFPNKRMLPHPETQVKGLAGSL*LVFQTL Trigger: GAGTGTTTGAAACACTAAGCACAGTGAACCTGCGAG...TCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR CCA 90 bp | AAAATGGAATTTCTCATGTTGGTAACCACCTTTACTCGCAGGTTCACTGTGCTTCCTGCAATGGACGCGTaGCCAGGAGAAGCCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: KMEFLMLVTTFTRRFTVLPAMDA*PGEAQH Trigger: GTGCTGGGCTTCTCCTGGCCACGCGTCCATTGCAGG...AAGCACAGTGAACCTGCGAGTAAAGGTGGTTACCAACATGAGAAATTCCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR CCA 90 bp | TATGAAAATAGCAACACTTTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCACCTGCAATGGACGCGTaGCCAGGAGAAGCCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: YENSNTLKRNCETAVRVAPAMDA*PGEAQH Trigger: GTGCTGGGCTTCTCCTGGCCACGCGTCCATTGCAGG...TGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAAGTGTTGCTATTTTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTATGCACTGGAATGCCTTTCATAGAGCAGTCTCAAAAGCTGTGGTTTTTGTCCACTGCCTGCAATaGACGCGTGGCCAGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: TCMHWNAFHRAVSKAVVFVHCLQ*TRGQEK Trigger: CTTCTCCTGGCCACGCGTCCATTGCAGGCAGTGGAC...AAAAACCACAGCTTTTGAGACTGCTCTATGAAAGGCATTCCAGTGCATACAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGGATGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTTGGTCCACTGCCTGCAATaGACGCGTGGCCAGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LGWRQRQQKSVKPESRGLVHCLQ*TRGQEK Trigger: CTTCTCCTGGCCACGCGTCCATTGCAGGCAGTGGAC...CAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCATCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGATGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTTGGCAAGAGGCTGGCGGTaGAAGAAAAGCAGCATGCGC | + |
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Preference number: 2 (lower is better) Translates to: LGWRQRQQKSVKPESRGLARGWR*KKSSMR Trigger: GCGCATGCTGCTTTTCTTGCACCGCCAGCCTCTTGC...CAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCATCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGACGACACAAGGCATTCACAGTTAATAGGCTGGCTGCTGTTCATGTCACAGAAAGGGATCCTCCTCTaGAGAGCTGTGCCTGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: TDDTRHSQLIGWLLFMSQKGILL*RAVPVL Trigger: TAAGACAGGCACAGCTCTGCAGAGGAGGATCCCTTT...CTGTGACATGAACAGCAGCCAGCCTATTAACTGTGAATGCCTTGTGTCGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR CAA 90 bp | CACCATGAAAGAGTAACTAAAATCTCAAGCATAGTTCAAAGTGCTTaGCAGTCATGCCGCCAGCAAACCAGGAGGCTCATGAGGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: HHERVTKISSIVQSA*QSCRQQTRRLMRVG Trigger: ACCCACCCTCATGAGCCTCCTGGTTTGCTGGCGGCATGACTGCAAAGCACTTTGAACTATGCTTGAGATTTTAGTTACTCTTTCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGGATGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTTGACCCTTCTGTACCTGTaGCTCAGGGAATGGCAAGCG | + |
|
Preference number: 2 (lower is better) Translates to: LGWRQRQQKSVKPESRGLTLLYL*LREWQA Trigger: CGCTTGCCATTCCCTGAGTCACAGGTACAGAAGGGT...CAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCATCCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAGTGAGTCATAGCACCACATGGTTGGGGAAACCTGTTAACTGTGTACTTCTGAGTGTGAAAACGAACTaGAGAGCAGCCTCCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RVSHSTTWLGKPVNCVLLSVKTN*RAASKR Trigger: TCTCTTGGAGGCTGCTCTGCAGTTCGTTTTCACACT...CAGAAGTACACAGTTAACAGGTTTCCCCAACCATGTGGTGCTATGACTCACTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCACTGTCTCTGTGCTCTGCTAAGCATAGTTCAAAGTaGTTTGCAGTCATGCCGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LKRNCETAVRVALSLCSAKHSSK*FAVMPP Trigger: TGGCGGCATGACTGCAAAGCACTTTGAACTATGCTT...AGCAGAGCACAGAGACAGTGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCACTGTCTCTGTGCTCTGCTCTGCTGTGTTGGCTCTaGTTTCTCATCCACATAATG | + |
|
Preference number: 2 (lower is better) Translates to: LKRNCETAVRVALSLCSALLCWL*FLIHIM Trigger: CATTATGTGGATGAGAAACCAGAGCCAACACAGCAG...AGCAGAGCACAGAGACAGTGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGACGACACAAGGCATTCACAGTTAATAGGCTGGCTGCTGTTCATGTCACAGTTTATGGCTAATGGGTaGCATAACCGTGGGAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: TDDTRHSQLIGWLLFMSQFMANG*HNRGNS Trigger: ACTGTTCCCACGGTTATGTCACCCATTAGCCATAAA...CTGTGACATGAACAGCAGCCAGCCTATTAACTGTGAATGCCTTGTGTCGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAGGATGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTTGGTCACCCTGAGAGAATaGTTCTTTAACCGTGGGACC | + |
|
Preference number: 2 (lower is better) Translates to: LGWRQRQQKSVKPESRGLVTLRE*FFNRGT Trigger: GGTCCCACGGTTAAAGAATCATTCTCTCAGGGTGAC...CAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCATCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CCA 90 bp | CACACAGCATTTAAAACAATCCCATCTATGATCCTTCTTTGCATCGAGACAATCGGACGGTTTGCACAGTaGCACAGAGAGCTTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HTAFKTIPSMILLCIETIGRFAQ*HRELQQ Trigger: CTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCC...GATTGTCTCGATGCAAAGAAGGATCATAGATGGGATTGTTTTAAATGCTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCATTCCCCAACAAGAGGATGTTGCCGCACCCTGAAACACAAGTGAAGGGAAAGGTTCACACTGAATaGAGAAGACTCTTTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: AAFPNKRMLPHPETQVKGKVHTE*RRLFSF Trigger: AAAAGAAAAGAGTCTTCTCCATTCAGTGTGAACCTT...TCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR GCA 90 bp | TATGAAAATAGCAACACTTTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCAAGTGTGAAAACGAACTaGAGAGCAGCCTCCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: YENSNTLKRNCETAVRVASVKTN*RAASKR Trigger: TCTCTTGGAGGCTGCTCTGCAGTTCGTTTTCACACT...TGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAAGTGTTGCTATTTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCTGTATGCACTGGAATGCCTTTCATAGAGCAGTCTCAAAAGCTGTGGTTTTTAAGCATAGTTCAAAGTaGTTTGCAGTCATGCCGCCA | + |
|
Preference number: 2 (lower is better) Translates to: TCMHWNAFHRAVSKAVVFKHSSK*FAVMPP Trigger: TGGCGGCATGACTGCAAAGCACTTTGAACTATGCTT...AAAAACCACAGCTTTTGAGACTGCTCTATGAAAGGCATTCCAGTGCATACAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAGGATGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTTGGTAGCACTGTCTCTGTaGTCTGCTCATTTAATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LGWRQRQQKSVKPESRGLVALSL*SAHLMP Trigger: TGGCATTAAATGAGCAGAGCACAGAGACAGTGCTAC...CAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCATCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAATGGAATTTCTCATGTTGGTAACCACCTTTACTCGCAGGTTCACTGTGCTTCAACTACTGCTGTGTTaGCTCTGGTTTCTCATCCAC | + |
|
Preference number: 2 (lower is better) Translates to: KMEFLMLVTTFTRRFTVLQLLLC*LWFLIH Trigger: GTGGATGAGAAACCAGAGCCAACACAGCAGTAGTTG...AAGCACAGTGAACCTGCGAGTAAAGGTGGTTACCAACATGAGAAATTCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAATGGAATTTCTCATGTTGGTAACCACCTTTACTCGCAGGTTCACTGTGCTTTTTATGGCTAATGGGTaGCATAACCGTGGGAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: KMEFLMLVTTFTRRFTVLFMANG*HNRGNS Trigger: ACTGTTCCCACGGTTATGTCACCCATTAGCCATAAA...AAGCACAGTGAACCTGCGAGTAAAGGTGGTTACCAACATGAGAAATTCCATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGAAAATAGCAACACTTTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCATTTATGGCTAATGGGTaGCATAACCGTGGGAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: YENSNTLKRNCETAVRVAFMANG*HNRGNS Trigger: ACTGTTCCCACGGTTATGTCACCCATTAGCCATAAA...TGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAAGTGTTGCTATTTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR TCA 90 bp | CACACAGCATTTAAAACAATCCCATCTATGATCCTTCTTTGCATCGAGACAATCCACCAATCTGTAGTGTaGAAACGAACTGCAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HTAFKTIPSMILLCIETIHQSVV*KRTAEQ Trigger: CTGCTCTGCAGTTCGTTTTCACACTACAGATTGGTG...GATTGTCTCGATGCAAAGAAGGATCATAGATGGGATTGTTTTAAATGCTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGTATGCACTGGAATGCCTTTCATAGAGCAGTCTCAAAAGCTGTGGTTTTTACAGACAGCAGTTTATaGCTAATGGGTGACATAACC | + |
|
Preference number: 2 (lower is better) Translates to: TCMHWNAFHRAVSKAVVFTDSSL*LMGDIT Trigger: GGTTATGTCACCCATTAGCCATAAACTGCTGTCTGT...AAAAACCACAGCTTTTGAGACTGCTCTATGAAAGGCATTCCAGTGCATACAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGAAAATAGCAACACTTTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCAAGTCATAGCACCACATaGTTGGGGAAACCTGTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: YENSNTLKRNCETAVRVASHSTT*LGKPVN Trigger: GTTAACAGGTTTCCCCAACCATGTGGTGCTATGACT...TGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAAGTGTTGCTATTTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGAAAATAGCAACACTTTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCAACAGACAGCAGTTTATaGCTAATGGGTGACATAACC | + |
|
Preference number: 2 (lower is better) Translates to: YENSNTLKRNCETAVRVATDSSL*LMGDIT Trigger: GGTTATGTCACCCATTAGCCATAAACTGCTGTCTGT...TGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAAGTGTTGCTATTTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR CAA 90 bp | TGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTaGTCTAATCAGTTAGAAAGACTGAACACAAGAGTTCATGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: WRQRQQKSVKPESRG*SNQLERLNTRVHAS Trigger: TGAAGCATGAACTCTTGTGTTCAGTCTTTCTAACTGATTAGACAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAATGGAATTTCTCATGTTGGTAACCACCTTTACTCGCAGGTTCACTGTGCTTTTTAAAGGTTCACACTaGATGGAGAAGACTCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KMEFLMLVTTFTRRFTVLFKGSH*MEKTLF Trigger: GAAAAGAGTCTTCTCCATTCAGTGTGAACCTTTAAA...AAGCACAGTGAACCTGCGAGTAAAGGTGGTTACCAACATGAGAAATTCCATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTTAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCAGTCATATTTGGCTTATaGCACAGTAAGTCATGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: YLVKLGVTGLAHFYECNAVIFGL*HSKSWL Trigger: GAGCCATGACTTACTGTGGCATAAGCCAAATATGAC...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAGGATGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTTGAAAAAGGCAAGTATTTaGATTCCACCACATCATGAT | + |
|
Preference number: 2 (lower is better) Translates to: LGWRQRQQKSVKPESRGLKKASI*IPPHHD Trigger: ATCATGATGTGGTGGAATGCAAATACTTGCCTTTTT...CAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCATCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR CAA 90 bp | TCTATTATCAAAATGTTCACGGAAGATAAAATGGAATTTCTCATGTaGGTAACCACCTTTACTCGCAGGTTCACTGTGCTTAGTGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SIIKMFTEDKMEFLM*VTTFTRRFTVLSVS Trigger: TGAAACACTAAGCACAGTGAACCTGCGAGTAAAGGTGGTTACCAACATGAGAAATTCCATTTTATCTTCCGTGAACATTTTGATAATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR CCA 72 bp | AGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGCAATaGACGCGTGGCCAGGAGAAGCCCAGCACGGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSMLVVSVHCLQ*TRGQEKPSTGE Trigger: TTCACCCGTGCTGGGCTTCTCCTGGCCACGCGTCCATTGCAGGCAGTGGACTGAAACCACCAGCATCGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGCAATGGACGCGTGGCCAGGAGGTGGCAAAGGACGGTTaGCACAGTGGCACAGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSMLVVSVHCLQWTRGQEVAKDG*HSGTES Trigger: GCTCTCTGTGCCACTGTGCAAACCGTCCTTTGCCAC...CTCCTGGCCACGCGTCCATTGCAGGCAGTGGACTGAAACCACCAGCATCGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR TCA 72 bp | CTTTGCAGTCATGCCGCCAGCAAACCAGGAGGCTCATaGGGGTGGGTGGCAAAGGACGGTTTGCACAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LCSHAASKPGGS*GWVAKDGLHSG Trigger: GCCACTGTGCAAACCGTCCTTTGCCACCCACCCTCATGAGCCTCCTGGTTTGCTGGCGGCATGACTGCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR TCA 72 bp | GAATGGCAAGCGGCCCCTCCGAGAAAGGTCCCAGTGTaGACAGGGTTAGCTCGATGCTGGTGGTTTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EWQAAPPRKVPV*TGLARCWWFQS Trigger: GGACTGAAACCACCAGCATCGAGCTAACCCTGTTCACACTGGGACCTTTCTCGGAGGGGCCGCTTGCCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR TCA 72 bp | CCAACAAGAGGATGTTGCCGCACCCTGAAACACAAGTaGAGGGAGGAAGGGTGGCTGGGGCTCAGGTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PTRGCCRTLKHK*REEGWLGLRYW Trigger: CCAGTACCTGAGCCCCAGCCACCCTTCCTCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR TCA 72 bp | AGCTGCATTCCCCAACAAGAGGATGTTGCCGCACCCTaGAACACAAGTGAAGGGAGGAAGGGTGGCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SCIPQQEDVAAP*NTSEGRKGGWG Trigger: GCCCCAGCCACCCTTCCTCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR GCA 72 bp | CAGGAGGCTCATGAGGGTGGGTGGCAAAGGACGGTTTaGACAGTGGCACAGAGAGCTTCAGCAGACCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QEAHEGGWQRTV*TVAQRASADQA Trigger: TGCTTGGTCTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCCTTTGCCACCCACCCTCATGAGCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR CCA 72 bp | ATAGCAAACACCGAGACACGCCTGCCTGCAAGAGGCTaGCGGTGCAAGAAAAGCAGCATGCGCTTCCATACA | + |
|
Preference number: 3 (lower is better) Translates to: IANTETRLPARG*RCKKSSMRFHT Trigger: TGTATGGAAGCGCATGCTGCTTTTCTTGCACCGCCAGCCTCTTGCAGGCAGGCGTGTCTCGGTGTTTGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR TCA 72 bp | ATCCACATAATGGCTACTACCACCCTTCTGTACCTGTaGCTCAGGGAATGGCAAGCGGCCCCTCCGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IHIMATTTLLYL*LREWQAAPPRK Trigger: CTTTCTCGGAGGGGCCGCTTGCCATTCCCTGAGTCACAGGTACAGAAGGGTGGTAGTAGCCATTATGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR TCA 72 bp | GCGCTTCCATACAGACAGCAGTTTATGGCTAATGGGTaGCATAACCGTGGGAACAGTGACTCTCGCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALPYRQQFMANG*HNRGNSDSRCQ Trigger: CTGGCAGCGAGAGTCACTGTTCCCACGGTTATGTCACCCATTAGCCATAAACTGCTGTCTGTATGGAAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR GCA 72 bp | CCACATGGTTGGGGAAACCTGTTAACTGTGTACTTCTaGACGAGGGGCAAGGCAAGCAAGCAAGCAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: PHGWGNLLTVYF*TRGKASKQADA Trigger: TGCATCTGCTTGCTTGCTTGCCTTGCCCCTCGTGCAGAAGTACACAGTTAACAGGTTTCCCCAACCATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR GCA 72 bp | AAAATCTCAAGCATAGTTCAAAGTGCTTTGCAGTCATaGCGCCAGCAAACCAGGAGGCTCATGAGGGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KISSIVQSALQS*RQQTRRLMRVG Trigger: ACCCACCCTCATGAGCCTCCTGGTTTGCTGGCGGCATGACTGCAAAGCACTTTGAACTATGCTTGAGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCACTGTCTCTGTGCTCTGCTATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LKRNCETAVRVALSLCSAITVRT*ANSPIC Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...AGCAGAGCACAGAGACAGTGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGACGGTTTGCACAGTGGCACAGAGAGCTTCAGCAGACCAAGCACTGCTAGAAACCAAGTCATATTaGGCTTATGCCACAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QRTVCTVAQRASADQALLETKSY*AYATVS Trigger: ACTTACTGTGGCATAAGCCAAATATGACTTGGTTTC...TAGCAGTGCTTGGTCTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCACTGTCTCTGTGCTCTGCTGAAACCAAGTCATATTaGGCTTATGCCACAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LKRNCETAVRVALSLCSAETKSY*AYATVS Trigger: ACTTACTGTGGCATAAGCCAAATATGACTTGGTTTC...AGCAGAGCACAGAGACAGTGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR TCA 72 bp | ATCTTAGATGTGTTTTCACAGACTTCAGGGACCGAGTaGGTCATAGCACCACATGGTTGGGGAAACCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ILDVFSQTSGTE*VIAPHGWGNLL Trigger: TAACAGGTTTCCCCAACCATGTGGTGCTATGACTCACTCGGTCCCTGAAGTCTGTGAAAACACATCTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR GCA 72 bp | AACTGTGAAACAGCGGTCAGGGTAGCACTGTCTCTGTaGTCTGCTCATTTAATGCCATTTAAAGGTTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: NCETAVRVALSL*SAHLMPFKGSH Trigger: GTGTGAACCTTTAAATGGCATTAAATGAGCAGAGCACAGAGACAGTGCTACCCTGACCGCTGTTTCACAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR TCA 72 bp | TCCAAAGGCAAGCCACAGTCACGGTGGTTTGTTTCTTaGGGCAGTTCAGAGATTATCTGGAGTTGTAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: SKGKPQSRWFVS*GSSEIIWSCKY Trigger: ATATTTACAACTCCAGATAATCTCTGAACTGCCTCAAGAAACAAACCACCGTGACTGTGGCTTGCCTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR GCA 72 bp | TTGGCAAATTCACCAATCTGTAGTGTGAAAACGAACTaGAGAGCAGCCTCCAAGAGAACAATGCTACATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LANSPICSVKTN*RAASKRTMLHQ Trigger: TTGATGTAGCATTGTTCTCTTGGAGGCTGCTCTGCAGTTCGTTTTCACACTACAGATTGGTGAATTTGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGAAAATAGCAACACTTTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCAATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: YENSNTLKRNCETAVRVAITVRT*ANSPIC Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...TGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAAGTGTTGCTATTTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGGATGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTTGATGGAATTTCTCATGTaGGTAACCACCTTTACTCGC | + |
|
Preference number: 3 (lower is better) Translates to: LGWRQRQQKSVKPESRGLMEFLM*VTTFTR Trigger: GCGAGTAAAGGTGGTTACCAACATGAGAAATTCCAT...CAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCATCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGGATGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTTGACGGTGGTTTGTTTCTaGAGGCAGTTCAGAGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: LGWRQRQQKSVKPESRGLTVVCF*RQFRDY Trigger: ATAATCTCTGAACTGCCTCAAGAAACAAACCACCGT...CAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCATCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR GCA 72 bp | CAAAGTTGTCAAGGAAACCAAGTCATATTTGGCTTATaGCACAGTAAGTCATGGCTCCTACTTCTTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QSCQGNQVIFGL*HSKSWLLLLPE Trigger: TTCTGGAAGAAGTAGGAGCCATGACTTACTGTGGCATAAGCCAAATATGACTTGGTTTCCTTGACAACTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTTAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCAATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: YLVKLGVTGLAHFYECNAITVRT*ANSPIC Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR TCA 72 bp | CCGACTTCCATCCTAGTCATCACGGTGGTTTTTACTTaGGTCTCTATTATCAAAATGTTCACGGAAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: PTSILVITVVFT*VSIIKMFTEDK Trigger: TTTATCTTCCGTGAACATTTTGATAATAGAGACTCAAGTAAAAACCACCGTGATGACTAGGATGGAAGTCGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR CCA 72 bp | AGAGGAACACAAAGCAGGGAAACAGAGGAAGGTTTATaGAAACGTAAGCTTCGATTTAAAATAAGGAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RGTQSRETEEGL*KRKLRFKIRSN Trigger: ATTGCTCCTTATTTTAAATCGAAGCTTACGTTTCCATAAACCTTCCTCTGTTTCCCTGCTTTGTGTTCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTTAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCAAAAGCAACCCACATTTaGGTCTCATTTACAGATATC | + |
|
Preference number: 3 (lower is better) Translates to: YLVKLGVTGLAHFYECNAKATHI*VSFTDI Trigger: GATATCTGTAAATGAGACCAAAATGTGGGTTGCTTT...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGCAATGGACGCGTGGCCAGGAGTGTGGACGACAGGCTTaGTGCTCTTGGGTAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSMLVVSVHCLQWTRGQECGRQA*CSWVNS Trigger: GGAGTTTACCCAAGAGCAGCAAGCCTGTCGTCCACA...CTCCTGGCCACGCGTCCATTGCAGGCAGTGGACTGAAACCACCAGCATCGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087181.12 |
||
| CDS-3UTR CCA 90 bp | CCACCATCTTGTAGCCATCACCTGCCTGGGCAGGCACGGATCCCTCTATACCATTTCCTCAGACCGTTGTaGACGACAGGCTTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSCSHHLPGQARIPLYHFLRPL*TTGLLL Trigger: GAGCAGCAAGCCTGTCGTCCACAACGGTCTGAGGAA...ATGGTATAGAGGGATCCGTGCCTGCCCAGGCAGGTGATGGCTACAAGATGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087181.12 |
||
| 3UTR CAA 72 bp | AAACGGCTGCAAGCTGCATTCCCCAACAAGAGGATGTaGCCGCACCCTGAAACACAAGTGAAGGGAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRLQAAFPNKRM*PHPETQVKGGR Trigger: CCTTCCTCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGCTTGCAGCCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCAAGAGAACAATGCTACATCAAGCAGGGCGGCCCATTCAATAGCAAACACAGGCTTCCTGTTTGGTaGTCGTCTTGGCCAACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPREQCYIKQGGPFNSKHRLPVW*SSWPTS Trigger: AGACGTTGGCCAAGACGATCACCAAACAGGAAGCCT...GTGTTTGCTATTGAATGGGCCGCCCTGCTTGATGTAGCATTGTTCTCTTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR CCA 90 bp | CCACCATCTTGTAGCCATCACCTGCCTGGGCAGGCACGGATCCCTCTATACCATTCTCTTTTTCCTGGGTaGCATCACTTTGCTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSCSHHLPGQARIPLYHSLFPG*HHFAKA Trigger: TGCTTTAGCAAAGTGATGCCACCCAGGAAAAAGAGA...ATGGTATAGAGGGATCCGTGCCTGCCCAGGCAGGTGATGGCTACAAGATGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR CAA 72 bp | GACTTCAGGGACCGAGTGAGTCATAGCACCACATGGTaGGGGAAACCTGTTAACTGTGTACTTCTGCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: DFRDRVSHSTTW*GKPVNCVLLHE Trigger: CTCGTGCAGAAGTACACAGTTAACAGGTTTCCCCAACCATGTGGTGCTATGACTCACTCGGTCCCTGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCAAGAGAACAATGCTACATCAAGCAGGGCGGCCCATTCAATAGCAAACACAGTTCAGCTGAAAGTTaGCAGCTGCAGCATCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPREQCYIKQGGPFNSKHSSAES*QLQHPS Trigger: ACTCGGATGCTGCAGCTGTCAACTTTCAGCTGAACT...GTGTTTGCTATTGAATGGGCCGCCCTGCTTGATGTAGCATTGTTCTCTTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000113558.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAGTGTGAACAGGGTTAGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GPSVNRVSSMLVVSVHCLITVPT*TWQCLC Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...CAGGCAGTGGACTGAAACCACCAGCATCGAGCTAACCCTGTTCACACTGGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 |
||
| CDS-3UTR GCA 90 bp | CGAGTGAGTCATAGCACCACATGGTTGGGGAAACCTGTTAACTGTGTACTTCTGTGTTTATGTCTAGGCTaGGCTGGTCCTTTTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVSHSTTWLGKPVNCVLLCLCLG*AGPFPV Trigger: CACGGGAAAAGGACCAGCGCAGCCTAGACATAAACA...CAGAAGTACACAGTTAACAGGTTTCCCCAACCATGTGGTGCTATGACTCACTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 |
||
| CDS-3UTR GCA 90 bp | CAAAGGACGGTTTGCACAGTGGCACAGAGAGCTTCAGCAGACCAAGCACTGCTAGGTAGATCTTATGAATaGTTGCCAGTGTTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QRTVCTVAQRASADQALLGRSYE*LPVLRD Trigger: ATCTCTCAACACTGGCAAGCATTCATAAGATCTACC...TAGCAGTGCTTGGTCTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGACGGTTTGCACAGTGGCACAGAGAGCTTCAGCAGACCAAGCACTGCTAATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: QRTVCTVAQRASADQALLITVPT*TWQCLC Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...TAGCAGTGCTTGGTCTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 |
||
| CDS-3UTR CCA 90 bp | GCTGCATTCCCCAACAAGAGGATGTTGCCGCACCCTGAAACACAAGTGAAGGGAAGAACATTGCACCACTaGTCTTTGTTTATCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAFPNKRMLPHPETQVKGRTLHH*SLFITL Trigger: CAAAGTGATAAACAAAGACCAGTGGTGCAATGTTCT...TCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCAAGGAAACCAAGTCATATTTGGCTTATGCCACAGTAAGTCATGGCTCAGTTCAGCTGAAAGTTaGCAGCTGCAGCATCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCQGNQVIFGLCHSKSWLSSAES*QLQHPS Trigger: ACTCGGATGCTGCAGCTGTCAACTTTCAGCTGAACT...GAGCCATGACTTACTGTGGCATAAGCCAAATATGACTTGGTTTCCTTGACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000113558.8 |
||
| 3UTR CAA 72 bp | AGAGTAACTAAAATCTCAAGCATAGTTCAAAGTGCTTaGCAGTCATGCCGCCAGCAAACCAGGAGGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RVTKISSIVQSA*QSCRQQTRRLM Trigger: CATGAGCCTCCTGGTTTGCTGGCGGCATGACTGCAAAGCACTTTGAACTATGCTTGAGATTTTAGTTACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR CAA 72 bp | TCGAGAAATCCAAAGGCAAGCCACAGTCACGGTGGTTaGTTTCTTGAGGCAGTTCAGAGATTATCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRNPKASHSHGG*FLEAVQRLSGV Trigger: AACTCCAGATAATCTCTGAACTGCCTCAAGAAACAAACCACCGTGACTGTGGCTTGCCTTTGGATTTCTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR GCA 90 bp | TATGAAAATAGCAACACTTTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCATGTTTATGTCTAGGCTaGGCTGGTCCTTTTCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: YENSNTLKRNCETAVRVACLCLG*AGPFPV Trigger: CACGGGAAAAGGACCAGCGCAGCCTAGACATAAACA...TGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAAGTGTTGCTATTTTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 |
||
| CDS-3UTR TCA 90 bp | ATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTGATAGTTCAGCTGAAAGTTaGCAGCTGCAGCATCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IHVSFVKLKTTGQKTAGDSSAES*QLQHPS Trigger: ACTCGGATGCTGCAGCTGTCAACTTTCAGCTGAACT...ATCACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
||
| CDS-3UTR TCA 90 bp | ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTAGTTCAGCTGAAAGTTaGCAGCTGCAGCATCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MFCASNFQARTSITTFSGSSAES*QLQHPS Trigger: ACTCGGATGCTGCAGCTGTCAACTTTCAGCTGAACT...ACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134092.9 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTAGAGGAACACAAAGCAGGGAAACAGAGGAAGGTTTATGGAAACGTAACTTTGTATTTTGATTaGCGTGCAAAGTCAAACGCG | + |
|
Preference number: 4 (lower is better) Translates to: ALLEEHKAGKQRKVYGNVTLYFD*RAKSNA Trigger: CGCGTTTGACTTTGCACGGCAATCAAAATACAAAGT...TACGTTTCCATAAACCTTCCTCTGTTTCCCTGCTTTGTGTTCCTCTAGCAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113558.8 |
||
| CDS-3UTR GCA 90 bp | ATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTGATTTTTGCTGCCATCTCTaGTCCTCCAACTGTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: IHVSFVKLKTTGQKTAGDFCCHL*SSNCHA Trigger: GGCATGACAGTTGGAGGAGCAGAGATGGCAGCAAAA...ATCACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
||
| CDS-3UTR CCA 90 bp | TATTTAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCAATGTCTAGGCTGCGCTaGTCCTTTTCCCGTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLVKLGVTGLAHFYECNAMSRLR*SFSRAK Trigger: CTTTGCACGGGAAAAGGACCAGCGCAGCCTAGACAT...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 |
||
| CDS-3UTR GCA 90 bp | ACCTGTATGCACTGGAATGCCTTTCATAGAGCAGTCTCAAAAGCTGTGGTTTTTGGCATCCTCAGTTCCTaGATATTCATAAAACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TCMHWNAFHRAVSKAVVFGILSS*IFIKPL Trigger: GAGTGGTTTTATGAATATGCAGGAACTGAGGATGCC...AAAAACCACAGCTTTTGAGACTGCTCTATGAAAGGCATTCCAGTGCATACAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTATGCACTGGAATGCCTTTCATAGAGCAGTCTCAAAAGCTGTGGTTTTTTCTCTTTTTCCTGGGTaGCATCACTTTGCTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TCMHWNAFHRAVSKAVVFSLFPG*HHFAKA Trigger: TGCTTTAGCAAAGTGATGCCACCCAGGAAAAAGAGA...AAAAACCACAGCTTTTGAGACTGCTCTATGAAAGGCATTCCAGTGCATACAGGT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGTATGCACTGGAATGCCTTTCATAGAGCAGTCTCAAAAGCTGTGGTTTTTGGTAGATCTTATGAATaGTTGCCAGTGTTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCMHWNAFHRAVSKAVVFGRSYE*LPVLRD Trigger: ATCTCTCAACACTGGCAAGCATTCATAAGATCTACC...AAAAACCACAGCTTTTGAGACTGCTCTATGAAAGGCATTCCAGTGCATACAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTTCAACATCTCTTTTTCCTGGGTaGCATCACTTTGCTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CASNFQARTSITTFSGSTSLFPG*HHFAKA Trigger: TGCTTTAGCAAAGTGATGCCACCCAGGAAAAAGAGA...TGTTGAACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134092.9 |
||
| CDS-3UTR GCA 90 bp | CCTATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTGGTAGATCTTATGAATaGTTGCCAGTGTTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PIHVSFVKLKTTGQKTAGGRSYE*LPVLRD Trigger: ATCTCTCAACACTGGCAAGCATTCATAAGATCTACC...ACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
||
| CDS-3UTR GCA 90 bp | TGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTTCAACAGGTAGATCTTATGAATaGTTGCCAGTGTTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CASNFQARTSITTFSGSTGRSYE*LPVLRD Trigger: ATCTCTCAACACTGGCAAGCATTCATAAGATCTACC...TGTTGAACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134092.9 |
||
| CDS-3UTR GCA 90 bp | CACACAGCATTTAAAACAATCCCATCTATGATCCTTCTTTGCATCGAGACAATCGGCATCCTCAGTTCCTaGATATTCATAAAACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HTAFKTIPSMILLCIETIGILSS*IFIKPL Trigger: GAGTGGTTTTATGAATATGCAGGAACTGAGGATGCC...GATTGTCTCGATGCAAAGAAGGATCATAGATGGGATTGTTTTAAATGCTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR CCA 90 bp | ATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTGATTCTCTTTTTCCTGGGTaGCATCACTTTGCTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHVSFVKLKTTGQKTAGDSLFPG*HHFAKA Trigger: TGCTTTAGCAAAGTGATGCCACCCAGGAAAAAGAGA...ATCACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
||
| CDS-3UTR GCA 90 bp | CACACAGCATTTAAAACAATCCCATCTATGATCCTTCTTTGCATCGAGACAATCGGTAGATCTTATGAATaGTTGCCAGTGTTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HTAFKTIPSMILLCIETIGRSYE*LPVLRD Trigger: ATCTCTCAACACTGGCAAGCATTCATAAGATCTACC...GATTGTCTCGATGCAAAGAAGGATCATAGATGGGATTGTTTTAAATGCTGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR GCA 90 bp | TATTTAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCAGGCATCCTCAGTTCCTaGATATTCATAAAACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: YLVKLGVTGLAHFYECNAGILSS*IFIKPL Trigger: GAGTGGTTTTATGAATATGCAGGAACTGAGGATGCC...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR GCA 90 bp | ATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTGATTATATTCAATTTTGCTaGCATCTCTGCTCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IHVSFVKLKTTGQKTAGDYIQFC*HLCSSN Trigger: GTTGGAGGAGCAGAGATGGCAGCAAAATTGAATATA...ATCACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
||
| 3UTR CAA 72 bp | AAAATGTTCACGGAAGATAAAATGGAATTTCTCATGTaGGTAACCACCTTTACTCGCAGGTTCACTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KMFTEDKMEFLM*VTTFTRRFTVL Trigger: AAGCACAGTGAACCTGCGAGTAAAGGTGGTTACCAACATGAGAAATTCCATTTTATCTTCCGTGAACATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR CAA 72 bp | CGGGTGAAACAAAGACAGGAAACAAACAGCTCTCACTaGTGGTTTAAAAACAAAAACAAACAAACAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVKQRQETNSSH*WFKNKNKQTTP Trigger: TGGAGTTGTTTGTTTGTTTTTGTTTTTAAACCACAAGTGAGAGCTGTTTGTTTCCTGTCTTTGTTTCACCCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| 3UTR CAA 72 bp | AGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTaGTCTAATCAGTTAGAAAGACTGAACACAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RQQKSVKPESRG*SNQLERLNTRV Trigger: AACTCTTGTGTTCAGTCTTTCTAACTGATTAGACAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
||
| CDS-3UTR CCA 90 bp | TATTTAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCAAGAACATTGCACCACTaGTCTTTGTTTATCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLVKLGVTGLAHFYECNARTLHH*SLFITL Trigger: CAAAGTGATAAACAAAGACCAGTGGTGCAATGTTCT...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | AGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGCAATGGACGCGTGGCCAGGAGGCGCAGGCTTCCTGTTaGGTGATCGTCTTGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: SSMLVVSVHCLQWTRGQEAQASC*VIVLAN Trigger: GTTGGCCAAGACGATCACCAAACAGGAAGCCTGCGC...CTCCTGGCCACGCGTCCATTGCAGGCAGTGGACTGAAACCACCAGCATCGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | AGCTCGATGCTGGTGGTTTCAGTCCACTGCCTGCAATGGACGCGTGGCCAGGAGCTGGGTGGCATCACTTaGCTAAAGCAGTCCGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SSMLVVSVHCLQWTRGQELGGIT*LKQSEE Trigger: TTCTTCGGACTGCTTTAGCAAAGTGATGCCACCCAG...CTCCTGGCCACGCGTCCATTGCAGGCAGTGGACTGAAACCACCAGCATCGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | CCACCATCTTGTAGCCATCACCTGCCTGGGCAGGCACGGATCCCTCTATACCATTGTTTGGTGATCGTCTaGGCCAACGTCTTCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: PPSCSHHLPGQARIPLYHCLVIV*ANVFCQ Trigger: CTGACAGAAGACGTTGGCCAAGACGATCACCAAACA...ATGGTATAGAGGGATCCGTGCCTGCCCAGGCAGGTGATGGCTACAAGATGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | CCACCATCTTGTAGCCATCACCTGCCTGGGCAGGCACGGATCCCTCTATACCATCTGGGTGGCATCACTTaGCTAAAGCAGTCCGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: PPSCSHHLPGQARIPLYHLGGIT*LKQSEE Trigger: TTCTTCGGACTGCTTTAGCAAAGTGATGCCACCCAG...ATGGTATAGAGGGATCCGTGCCTGCCCAGGCAGGTGATGGCTACAAGATGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | CAAAGGACGGTTTGCACAGTGGCACAGAGAGCTTCAGCAGACCAAGCACTGCTATGTTTGGTGATCGTCTaGGCCAACGTCTTCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: QRTVCTVAQRASADQALLCLVIV*ANVFCQ Trigger: CTGACAGAAGACGTTGGCCAAGACGATCACCAAACA...TAGCAGTGCTTGGTCTGCTGAAGCTCTCTGTGCCACTGTGCAAACCGTCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | CCACCATCTTGTAGCCATCACCTGCCTGGGCAGGCACGGATCCCTCTATACCATCTGAACTCCAGAACATaGCACCACTGGTCTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: PPSCSHHLPGQARIPLYHLNSRT*HHWSLF Trigger: AAACAAAGACCAGTGGTGCAATGTTCTGGAGTTCAG...ATGGTATAGAGGGATCCGTGCCTGCCCAGGCAGGTGATGGCTACAAGATGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | GCTGCATTCCCCAACAAGAGGATGTTGCCGCACCCTGAAACACAAGTGAAGGGAGAATGCTTGCCAGTGTaGAGAGATGAGAGTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: AAFPNKRMLPHPETQVKGECLPV*RDESSA Trigger: AGCTGAACTCTCATCTCTCAACACTGGCAAGCATTC...TCCCTTCACTTGTGTTTCAGGGTGCGGCAACATCCTCTTGTTGGGGAATGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | TCAAGCATAGTTCAAAGTGCTTTGCAGTCATGCCGCCAGCAAACCAGGAGGCTCAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: SSIVQSALQSCRQQTRRLSPNMH*AVFMSR Trigger: CCTAGACATAAACACTGCCAAGTGCATGTTGGGACT...GAGCCTCCTGGTTTGCTGGCGGCATGACTGCAAAGCACTTTGAACTATGCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 |
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| CDS-3UTR CAA 90 bp | TCAAGCATAGTTCAAAGTGCTTTGCAGTCATGCCGCCAGCAAACCAGGAGGCTCCTGAACTCCAGAACATaGCACCACTGGTCTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: SSIVQSALQSCRQQTRRLLNSRT*HHWSLF Trigger: AAACAAAGACCAGTGGTGCAATGTTCTGGAGTTCAG...GAGCCTCCTGGTTTGCTGGCGGCATGACTGCAAAGCACTTTGAACTATGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | AAAATGGAATTTCTCATGTTGGTAACCACCTTTACTCGCAGGTTCACTGTGCTTGCGCAGGCTTCCTGTTaGGTGATCGTCTTGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: KMEFLMLVTTFTRRFTVLAQASC*VIVLAN Trigger: GTTGGCCAAGACGATCACCAAACAGGAAGCCTGCGC...AAGCACAGTGAACCTGCGAGTAAAGGTGGTTACCAACATGAGAAATTCCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | TATGAAAATAGCAACACTTTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCAGCGCAGGCTTCCTGTTaGGTGATCGTCTTGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: YENSNTLKRNCETAVRVAAQASC*VIVLAN Trigger: GTTGGCCAAGACGATCACCAAACAGGAAGCCTGCGC...TGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAAGTGTTGCTATTTTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | ATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTGATGCGCAGGCTTCCTGTTaGGTGATCGTCTTGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: IHVSFVKLKTTGQKTAGDAQASC*VIVLAN Trigger: GTTGGCCAAGACGATCACCAAACAGGAAGCCTGCGC...ATCACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
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| CDS-3UTR CAA 90 bp | ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTGCGCAGGCTTCCTGTTaGGTGATCGTCTTGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: MFCASNFQARTSITTFSGAQASC*VIVLAN Trigger: GTTGGCCAAGACGATCACCAAACAGGAAGCCTGCGC...ACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134092.9 |
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| CDS TCA 90 bp | CAGCTTGTTAAGGGTATGGTAGATCTTATGAATGCTTGCCAGTGTTaGGAGATGAGAGTTCAGCTGAAAGTTGACAGCTGCAGCATCCGA | + |
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Preference number: 5 (lower is better) Translates to: QLVKGMVDLMNACQC*EMRVQLKVDSCSIR Trigger: TCGGATGCTGCAGCTGTCAACTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAGCATTCATAAGATCTACCATACCCTTAACAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063882.12 ENSMUST00000113558.8 ENSMUST00000133137.5 ENSMUST00000134092.9 |
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| CDS-3UTR CAA 90 bp | TTAGGATGGAGACAGAGGCAGCAGAAATCTGTTAAACCAGAATCTAGAGGTTTGTGTTTGGTGATCGTCTaGGCCAACGTCTTCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: LGWRQRQQKSVKPESRGLCLVIV*ANVFCQ Trigger: CTGACAGAAGACGTTGGCCAAGACGATCACCAAACA...CAAACCTCTAGATTCTGGTTTAACAGATTTCTGCTGCCTCTGTCTCCATCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | GCACTGCTAGAGGAACACAAAGCAGGGAAACAGAGGAAGGTTTATGGAAACGTAAGATCTTATGAATGCTaGCCAGTGTTGAGAGATGAG | + |
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Preference number: 5 (lower is better) Translates to: ALLEEHKAGKQRKVYGNVRSYEC*PVLRDE Trigger: CTCATCTCTCAACACTGGCAAGCATTCATAAGATCT...TACGTTTCCATAAACCTTCCTCTGTTTCCCTGCTTTGTGTTCCTCTAGCAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | TGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTTCAACATGTTTGGTGATCGTCTaGGCCAACGTCTTCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: CASNFQARTSITTFSGSTCLVIV*ANVFCQ Trigger: CTGACAGAAGACGTTGGCCAAGACGATCACCAAACA...TGTTGAACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134092.9 |
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| CDS-3UTR CAA 90 bp | TGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTTCAACACTGGGTGGCATCACTTaGCTAAAGCAGTCCGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: CASNFQARTSITTFSGSTLGGIT*LKQSEE Trigger: TTCTTCGGACTGCTTTAGCAAAGTGATGCCACCCAG...TGTTGAACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134092.9 |
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| CDS-3UTR CAA 90 bp | CCTATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTGAATGCTTGCCAGTGTaGAGAGATGAGAGTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PIHVSFVKLKTTGQKTAGECLPV*RDESSA Trigger: AGCTGAACTCTCATCTCTCAACACTGGCAAGCATTC...ACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
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| CDS-3UTR CAA 90 bp | TGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTTCAACAGAATGCTTGCCAGTGTaGAGAGATGAGAGTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CASNFQARTSITTFSGSTECLPV*RDESSA Trigger: AGCTGAACTCTCATCTCTCAACACTGGCAAGCATTC...TGTTGAACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134092.9 |
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| CDS-3UTR CAA 90 bp | ATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTGATTGTTTGGTGATCGTCTaGGCCAACGTCTTCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: IHVSFVKLKTTGQKTAGDCLVIV*ANVFCQ Trigger: CTGACAGAAGACGTTGGCCAAGACGATCACCAAACA...ATCACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
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| CDS-3UTR CAA 90 bp | ATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTGATCTGGGTGGCATCACTTaGCTAAAGCAGTCCGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: IHVSFVKLKTTGQKTAGDLGGIT*LKQSEE Trigger: TTCTTCGGACTGCTTTAGCAAAGTGATGCCACCCAG...ATCACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
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| CDS-3UTR CAA 90 bp | GCACTGCTAGAGGAACACAAAGCAGGGAAACAGAGGAAGGTTTATGGAAACGTAAAAATAGCCCATGTTTaGTGCATCCAATTTCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: ALLEEHKAGKQRKVYGNVKIAHV*CIQFPS Trigger: GCTTGGAAATTGGATGCACAAAACATGGGCTATTTT...TACGTTTCCATAAACCTTCCTCTGTTTCCCTGCTTTGTGTTCCTCTAGCAGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | TATGAAAATAGCAACACTTTGAAAAGGAACTGTGAAACAGCGGTCAGGGTAGCAAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: YENSNTLKRNCETAVRVASPNMH*AVFMSR Trigger: CCTAGACATAAACACTGCCAAGTGCATGTTGGGACT...TGCTACCCTGACCGCTGTTTCACAGTTCCTTTTCAAAGTGTTGCTATTTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 |
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| CDS-3UTR CAA 90 bp | GTCATATTTGGCTTATGCCACAGTAAGTCATGGCTCCTACTTCTTCCAGAAGTTCTGAACTCCAGAACATaGCACCACTGGTCTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: VIFGLCHSKSWLLLLPEVLNSRT*HHWSLF Trigger: AAACAAAGACCAGTGGTGCAATGTTCTGGAGTTCAG...AACTTCTGGAAGAAGTAGGAGCCATGACTTACTGTGGCATAAGCCAAATATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS-3UTR CAA 90 bp | CACACAGCATTTAAAACAATCCCATCTATGATCCTTCTTTGCATCGAGACAATCGAATGCTTGCCAGTGTaGAGAGATGAGAGTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HTAFKTIPSMILLCIETIECLPV*RDESSA Trigger: AGCTGAACTCTCATCTCTCAACACTGGCAAGCATTC...GATTGTCTCGATGCAAAGAAGGATCATAGATGGGATTGTTTTAAATGCTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS TCA 90 bp | CAGCTTGTTAAGGGTATGGTAGATCTTATGAATGCTTGCCAGTGTTaGGAGATGAGAGTTCAGCTGAAAGTCTTTCCAATGTCTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: QLVKGMVDLMNACQC*EMRVQLKVFPMSHF Trigger: GAAATGAGACATTGGAAAGACTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAGCATTCATAAGATCTACCATACCCTTAACAAGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087181.12 |
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| CDS-3UTR CAA 90 bp | CCTATACATGTTAGCTTTGTAAAATTGAAAACCACTGGCCAGAAGACAGCTGGTAGATTATATTCAATTTaGCTGCCATCTCTGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: PIHVSFVKLKTTGQKTAGRLYSI*LPSLLL Trigger: GAGGAGCAGAGATGGCAGCAAAATTGAATATAATCT...ACCAGCTGTCTTCTGGCCAGTGGTTTTCAATTTTACAAAGCTAACATGTATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
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| CDS-3UTR CAA 90 bp | CACACAGCATTTAAAACAATCCCATCTATGATCCTTCTTTGCATCGAGACAATCAAAATAGCCCATGTTTaGTGCATCCAATTTCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: HTAFKTIPSMILLCIETIKIAHV*CIQFPS Trigger: GCTTGGAAATTGGATGCACAAAACATGGGCTATTTT...GATTGTCTCGATGCAAAGAAGGATCATAGATGGGATTGTTTTAAATGCTGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 |
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| CDS CAA 72 bp | ACTGCAAGAGCGCAGGCTTCCTGTTTGGTGATCGTCTaGGCCAACGTCTTCTGTCAGATTCAGCTTGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: TARAQASCLVIV*ANVFCQIQLVK Trigger: CTTAACAAGCTGAATCTGACAGAAGACGTTGGCCAAGACGATCACCAAACAGGAAGCCTGCGCTCTTGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 ENSMUST00000113558.8 ENSMUST00000133137.5 ENSMUST00000134092.9 |
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| CDS GCA 72 bp | AAAGGGGCCAGATTTTTCCTAATAACAGTCCCAACATaGACTTGGCAGTGTTTATGTCTAGGCTGCGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: KGARFFLITVPT*TWQCLCLGCAG Trigger: ACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCCCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 |
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| CDS CCA 72 bp | AAAGTCTTTCCAATGTCTCATTTCCTCAGACCGTTGTaGACGACAGGCTTGCTGCTCTTGGGTAAACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: KVFPMSHFLRPL*TTGLLLLGKLH Trigger: ATGGAGTTTACCCAAGAGCAGCAAGCCTGTCGTCCACAACGGTCTGAGGAAATGAGACATTGGAAAGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087181.12 |
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| CDS CAA 72 bp | GGCCAGATTTTTCCTAATAACAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGGCTGCGCTGGTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GQIFPNNSPNMH*AVFMSRLRWSF Trigger: AAAGGACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063882.12 ENSMUST00000087181.12 |
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| CDS TCA 72 bp | AAGGGTATGGTAGATCTTATGAATGCTTGCCAGTGTTaGGAGATGAGAGTTCAGCTGAAAGTTGACAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KGMVDLMNACQC*EMRVQLKVDSC Trigger: GCAGCTGTCAACTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAGCATTCATAAGATCTACCATACCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063882.12 ENSMUST00000113558.8 ENSMUST00000133137.5 ENSMUST00000134092.9 |
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| CDS TCA 72 bp | AGAAGCCACTCTCGTCTCCTGGATAACATTTGCTGCTaGGATTATATTCAATTTTGCTGCCATCTCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSHSRLLDNICC*DYIQFCCHLCS Trigger: GGAGCAGAGATGGCAGCAAAATTGAATATAATCTCAGCAGCAAATGTTATCCAGGAGACGAGAGTGGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133137.5 |
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| CDS TCA 72 bp | AAGGGTATGGTAGATCTTATGAATGCTTGCCAGTGTTaGGAGATGAGAGTTCAGCTGAAAGTCTTTCCAATG | + |
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Preference number: 6 (lower is better) Translates to: KGMVDLMNACQC*EMRVQLKVFPM Trigger: CATTGGAAAGACTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAGCATTCATAAGATCTACCATACCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087181.12 |
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