Pregenerated sensors for DCUN1D3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048787Ensembl transcript IDs: ENSMUST00000059851.14, ENSMUST00000098080.9, ENSMUST00000207233.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGATCTAGTTCCTTGAGTCCATGGGGCCCTTGGCAAACTCCCTCTTaGCACTTTCCCCACATACACCCTTTCTTATCTGGGACAGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: RSSSLSPWGPWQTPS*HFPHIHPFLSGTES Trigger: ACTTTCTGTCCCAGATAAGAAAGGGTGTATGTGGGGAAAGTGCCAAGAGGGAGTTTGCCAAGGGCCCCATGGACTCAAGGAACTAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 90 bp | GCAAACTCCCTCTTGGCACTTTCCCCACATACACCCTTTCTTATCTaGGACAGAAAGTCTTACCTAACTCCACCTCTTCCCTCATTAGAT | + |
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Preference number: 1 (lower is better) Translates to: ANSLLALSPHTPFLI*DRKSYLTPPLPSLD Trigger: ATCTAATGAGGGAAGAGGTGGAGTTAGGTAAGACTTTCTGTCCCAGATAAGAAAGGGTGTATGTGGGGAAAGTGCCAAGAGGGAGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR TCA 90 bp | CTTCTTTTGGCAATGCTCAGGATATGTGATGGAAGTAGGTATCTATaGGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: LLLAMLRICDGSRYL*EQAGFPRETEHDAP Trigger: TGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATAGATACCTACTTCCATCACATATCCTGAGCATTGCCAAAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR GCA 90 bp | GTGCTGAGAGAAAAACAGCAGCTGCTAAATGGCTTCTTTTGGCAATaGTCAGGATATGTGATGGAAGTAGGTATCTATGAGAGCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VLREKQQLLNGFFWQ*SGYVMEVGIYESRL Trigger: CAGCCTGCTCTCATAGATACCTACTTCCATCACATATCCTGAGCATTGCCAAAAGAAGCCATTTAGCAGCTGCTGTTTTTCTCTCAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 90 bp | CATATTCAGTGCAGCAGGGAAGAGCAGTTAACAGATTCTGAGGTCTaGGGACCAGGACCAGAGAAAAGAGAATTCTTCTGTAGCAAATAT | + |
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Preference number: 1 (lower is better) Translates to: HIQCSREEQLTDSEV*GPGPEKREFFCSKY Trigger: ATATTTGCTACAGAAGAATTCTCTTTTCTCTGGTCCTGGTCCCCAGACCTCAGAATCTGTTAACTGCTCTTCCCTGCTGCACTGAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR TCA 90 bp | CCTTGGCCCAAAGTGTTGGCTGAAATTTGGATTTTCAGTCAGCTCTaGGAACTTCTTTATCAGATAGGTACATACAGACTTCTGGACCCA | + |
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Preference number: 1 (lower is better) Translates to: PWPKVLAEIWIFSQL*ELLYQIGTYRLLDP Trigger: TGGGTCCAGAAGTCTGTATGTACCTATCTGATAAAGAAGTTCTCAGAGCTGACTGAAAATCCAAATTTCAGCCAACACTTTGGGCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR GCA 90 bp | CAAAGTATGCAATTTCCAACGGTCTGTGTAGTAATGCTTAGACATTaGAGAATTCCAAAATGGCACCCTGATATCACCCCTTCCCAAATC | + |
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Preference number: 1 (lower is better) Translates to: QSMQFPTVCVVMLRH*RIPKWHPDITPSQI Trigger: GATTTGGGAAGGGGTGATATCAGGGTGCCATTTTGGAATTCTGCAATGTCTAAGCATTACTACACAGACCGTTGGAAATTGCATACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 90 bp | ATATTTGTGCTGAGAGAAAAACAGCAGCTGCTAAATGGCTTCTTTTaGCAATGCTCAGGATATGTGATGGAAGTAGGTATCTATGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: IFVLREKQQLLNGFF*QCSGYVMEVGIYES Trigger: GCTCTCATAGATACCTACTTCCATCACATATCCTGAGCATTGCCAAAAGAAGCCATTTAGCAGCTGCTGTTTTTCTCTCAGCACAAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 90 bp | AAGCATGCAATTCTTACCCAGGTTGAGAAACATGTACCCAGGATTTaGGGTAGACTAATCAAGGGAGGAAATTCCAAATATTTAATAGAC | + |
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Preference number: 1 (lower is better) Translates to: KHAILTQVEKHVPRI*GRLIKGGNSKYLID Trigger: GTCTATTAAATATTTGGAATTTCCTCCCTTGATTAGTCTACCCCAAATCCTGGGTACATGTTTCTCAACCTGGGTAAGAATTGCATGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR GCA 90 bp | ACAGTACTGTTTCAAGCTAATTCTGTGTGCATGGTAATTCTTCACTaGCCTTCTAATATGAACAGTACTGCTTTGCACATTTTCTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: TVLFQANSVCMVILH*PSNMNSTALHIFCY Trigger: ATAACAGAAAATGTGCAAAGCAGTACTGTTCATATTAGAAGGGCAGTGAAGAATTACCATGCACACAGAATTAGCTTGAAACAGTACTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR TCA 90 bp | GGTACATCTGGCCCAACAGCCACTTGGGCCTTCCAGCACTATCGTAAGTCTGTGGCTGGCCTTGTAGAGTaGGCATGGAGTCTAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GTSGPTATWAFQHYRKSVAGLVE*AWSLEN Trigger: GTTCTCTAGACTCCATGCTCACTCTACAAGGCCAGC...CACAGACTTACGATAGTGCTGGAAGGCCCAAGTGGCTGTTGGGCCAGATGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | TATGAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGGCTCTTGACTGGCCTTaGCCTTGGCTCTCCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: YESRLGFQEKQNMMPQHLALDWP*PWLSKS Trigger: GCTCTTGGAGAGCCAAGGCCAAGGCCAGTCAAGAGC...CAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATGCAAATGCTCTTGACTaGCCTTGGCCTTGGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNANALD*PWPWLS Trigger: GGAGAGCCAAGGCCAAGGCCAGTCAAGAGCATTTGC...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTAATCAAACCACCTCAGCATCTGTGCCCAATGCTCAAGCATCCTTCTCTCTAAATGGCTGGGGTTaGGGTGCAGGCATTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: SANQTTSASVPNAQASFSLNGWG*GAGIGI Trigger: AATCCCAATGCCTGCACCCCAACCCCAGCCATTTAG...AGAGAAGGATGCTTGAGCATTGGGCACAGATGCTGAGGTGGTTTGATTAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTAATCAAACCACCTCAGCATCTGTGCCCAATGCTCAAGCATCCTTCTCTCCCAAAGTCCCTCCCTaGATACTGTTCCTTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SANQTTSASVPNAQASFSPKVPP*ILFLSL Trigger: CAGAGAAAGGAACAGTATTCAGGGAGGGACTTTGGG...AGAGAAGGATGCTTGAGCATTGGGCACAGATGCTGAGGTGGTTTGATTAGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR TCA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATTCAAGCATCCTTCTCTaGAATAAAGAGGAGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNSSILL*NKEERG Trigger: GCCCCTCTCCTCTTTATTTCAGAGAAGGATGCTTGA...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATATCACAATTTCTAAATaGCTGGGGTTGGGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNITISK*LGLGCR Trigger: CCTGCACCCCAACCCCAGCCATTTAGAAATTGTGAT...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR TCA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATAACCTTACACCTCACTaGGAATCTCTTGGCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNNLTPH*ESLGKA Trigger: TGCTTTGCCAAGAGATTCTCAGTGAGGTGTAAGGTT...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | TATGAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGCTGTTATCTTTCCCTTaGCCCAAAGTGTTGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: YESRLGFQEKQNMMPQHLLLSFP*PKVLAE Trigger: TTCAGCCAACACTTTGGGCCAAGGGAAAGATAACAG...CAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR TCA 90 bp | TATGAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGACTGCCCTTCTAATATaGACAGTACTGCTTTGCACA | + |
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Preference number: 2 (lower is better) Translates to: YESRLGFQEKQNMMPQHLTALLI*TVLLCT Trigger: TGTGCAAAGCAGTACTGTTCATATTAGAAGGGCAGT...CAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTAATCAAACCACCTCAGCATCTGTGCCCAATGCTCAAGCATCCTTCTCTGCCCAAAGTGTTGGCTaGAATTTGGATTTTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SANQTTSASVPNAQASFSAQSVG*NLDFQS Trigger: TGACTGAAAATCCAAATTTCAGCCAACACTTTGGGC...AGAGAAGGATGCTTGAGCATTGGGCACAGATGCTGAGGTGGTTTGATTAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR GCA 90 bp | AGCAAAGCGTCAATGAGAATGATACATTCAAGTTTGGCAAGGAAGACTAAGGGAAATTCCTCATTTGGCTaGAGGGCAGCAGGCAGATCC | + |
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Preference number: 2 (lower is better) Translates to: SKASMRMIHSSLARKTKGNSSFG*RAAGRS Trigger: GGATCTGCCTGCTGCCCTGCAGCCAAATGAGGAATT...TCCCTTAGTCTTCCTTGCCAAACTTGAATGTATCATTCTCATTGACGCTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATAAACTACTGGGCTCCTaGATTCTTACTCAAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNKLLGS*ILTQGF Trigger: AAATCCTTGAGTAAGAATCCAGGAGCCCAGTAGTTT...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | TATGAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGCTTGGCCCAAAGTGTTaGCTGAAATTTGGATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: YESRLGFQEKQNMMPQHLLGPKC*LKFGFS Trigger: TGAAAATCCAAATTTCAGCCAACACTTTGGGCCAAG...CAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CAA 90 bp | TTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATCAGAACTaGGTTTTTCAGCTAATCAAACCACCTCAGCATCTGTGCCCAATG | + |
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Preference number: 2 (lower is better) Translates to: FQEKQNMMPQHLNQN*VFQLIKPPQHLCPM Trigger: CATTGGGCACAGATGCTGAGGTGGTTTGATTAGCTGAAAAACCAAGTTCTGATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR GCA 90 bp | TATGAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGGTAATGCTTAGACATTaGAGAATTCCAAAATGGCAC | + |
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Preference number: 2 (lower is better) Translates to: YESRLGFQEKQNMMPQHLVMLRH*RIPKWH Trigger: GTGCCATTTTGGAATTCTGCAATGTCTAAGCATTAC...CAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | CAGAAACTTTTGTTTCCCAGAAGTGTTAACTGCAAACCTTACACCTCACTGAGAGCCCTCAGAAACTACTaGGCTCCTGGATTCTTACTC | + |
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Preference number: 2 (lower is better) Translates to: QKLLFPRSVNCKPYTSLRALRNY*APGFLL Trigger: GAGTAAGAATCCAGGAGCCCAGTAGTTTCTGAGGGC...TCTCAGTGAGGTGTAAGGTTTGCAGTTAACACTTCTGGGAAACAAAAGTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTAATCAAACCACCTCAGCATCTGTGCCCAATGCTCAAGCATCCTTCTCTACACCCTTTCTTATCTaGGACAGAAAGTCTTACCTA | + |
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Preference number: 2 (lower is better) Translates to: SANQTTSASVPNAQASFSTPFLI*DRKSYL Trigger: TAGGTAAGACTTTCTGTCCCAGATAAGAAAGGGTGT...AGAGAAGGATGCTTGAGCATTGGGCACAGATGCTGAGGTGGTTTGATTAGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR TCA 90 bp | AGTACTGCTTTGCACATTTTCTGTTATCTTTCCCTTGGCCCAAAGTGTTGGCTGAATTCTTACCCAGGTTaGGAAACATGTACCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: STALHIFCYLSLGPKCWLNSYPG*ETCTQD Trigger: ATCCTGGGTACATGTTTCTCAACCTGGGTAAGAATT...CAGCCAACACTTTGGGCCAAGGGAAAGATAACAGAAAATGTGCAAAGCAGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTAATCAAACCACCTCAGCATCTGTGCCCAATGCTCAAGCATCCTTCTCTAATCCTATCAAGTTGTaGAAGAAATGGCAGGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: SANQTTSASVPNAQASFSNPIKL*KKWQAY Trigger: ATAAGCCTGCCATTTCTTGCACAACTTGATAGGATT...AGAGAAGGATGCTTGAGCATTGGGCACAGATGCTGAGGTGGTTTGATTAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | AACTCCCTCTTGGCACTTTCCCCACATACACCCTTTCTTATCTGGGACAGAAAGACTATCGTAAGTCTGTaGCTGATATTCATCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: NSLLALSPHTPFLIWDRKTIVSL*LIFIIS Trigger: TGAGATGATGAATATCAGCCACAGACTTACGATAGT...CTTTCTGTCCCAGATAAGAAAGGGTGTATGTGGGGAAAGTGCCAAGAGGGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR TCA 90 bp | AGTACTGCTTTGCACATTTTCTGTTATCTTTCCCTTGGCCCAAAGTGTTGGCTGAATAATATGCAAAACTaGGGTCTGGCACTGCATCAT | + |
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Preference number: 2 (lower is better) Translates to: STALHIFCYLSLGPKCWLNNMQN*GLALHH Trigger: ATGATGCAGTGCCAGACCTCAGTTTTGCATATTATT...CAGCCAACACTTTGGGCCAAGGGAAAGATAACAGAAAATGTGCAAAGCAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTAATCAAACCACCTCAGCATCTGTGCCCAATGCTCAAGCATCCTTCTCTGAAATTAATGCAATGTaGCTAACAGTTAACACTGCT | + |
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Preference number: 2 (lower is better) Translates to: SANQTTSASVPNAQASFSEINAM*LTVNTA Trigger: AGCAGTGTTAACTGTTAGCCACATTGCATTAATTTC...AGAGAAGGATGCTTGAGCATTGGGCACAGATGCTGAGGTGGTTTGATTAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAGCGTCAATGAGAATGATACATTCAAGTTTGGCAAGGAAGACTAAGGGATGCAGAATTCCAAAATaGCACCCTGATATCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: SKASMRMIHSSLARKTKGCRIPK*HPDITP Trigger: AGGGGTGATATCAGGGTGCCATTTTGGAATTCTGCA...TCCCTTAGTCTTCCTTGCCAAACTTGAATGTATCATTCTCATTGACGCTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR GCA 90 bp | AGCAAAGCGTCAATGAGAATGATACATTCAAGTTTGGCAAGGAAGACTAAGGGACATTTGCCCAAAGTATaGAATTTCCAACGGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SKASMRMIHSSLARKTKGHLPKV*NFQRSV Trigger: CACAGACCGTTGGAAATTGCATACTTTGGGCAAATG...TCCCTTAGTCTTCCTTGCCAAACTTGAATGTATCATTCTCATTGACGCTTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAGCGTCAATGAGAATGATACATTCAAGTTTGGCAAGGAAGACTAAGGGAAAGGAAGGACAATTGTaGGGCTTACAAAAATGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SKASMRMIHSSLARKTKGKEGQL*GLQKCS Trigger: GGAACATTTTTGTAAGCCTCACAATTGTCCTTCCTT...TCCCTTAGTCTTCCTTGCCAAACTTGAATGTATCATTCTCATTGACGCTTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR GCA 90 bp | ACCATGGAAACTCAAAAAGTCATTTGCCCAAAGTATGCAATTTCCAACGGTCTGTTTCTCTGCATTCAATaGTTAAGTGGTTTTCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: TMETQKVICPKYAISNGLFLCIQ*LSGFQY Trigger: GTACTGAAAACCACTTAAGCATTGAATGCAGAGAAA...CAGACCGTTGGAAATTGCATACTTTGGGCAAATGACTTTTTGAGTTTCCATGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 72 bp | CAGCTCTTCAGGCCCCAGTGGCAGCTTGACCAAAGCTaGCCTTGTAGAGTGAGCATGGAGTCTAGAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: QLFRPQWQLDQS*PCRVSMESREL Trigger: CAGTTCTCTAGACTCCATGCTCACTCTACAAGGCCAGCTTTGGTCAAGCTGCCACTGGGGCCTGAAGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059851.14 ENSMUST00000098080.9 ENSMUST00000207233.2 |
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| 3UTR GCA 72 bp | ACAGACTTCTGGACCCAACAGACATGTTGGCGCATCTaGCACAATGAAGAGAGAGCTGCTGAAGCAACCCCC | + |
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Preference number: 3 (lower is better) Translates to: TDFWTQQTCWRI*HNEERAAEATP Trigger: GGGGGTTGCTTCAGCAGCTCTCTCTTCATTGTGGCAGATGCGCCAACATGTCTGTTGGGTCCAGAAGTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 72 bp | CCCCAGCATGTAGTCCTGGGCCAGGTCAAACTGGTATaGGCTGCAATTACAGCTTACCAAGGAAACTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: PQHVVLGQVKLV*AAITAYQGNSE Trigger: TTCAGAGTTTCCTTGGTAAGCTGTAATTGCAGCCCATACCAGTTTGACCTGGCCCAGGACTACATGCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CAA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATTTGGCAAACTCCCTCTaGGCACTTTCCCCACATACA | + |
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Preference number: 3 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNLANSL*ALSPHT Trigger: TGTATGTGGGGAAAGTGCCAAGAGGGAGTTTGCCAA...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 72 bp | CTCTTGGCACTTTCCCCACATACACCCTTTCTTATCTaGGACAGAAAGTCTTACCTAACTCCACCTCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: LLALSPHTPFLI*DRKSYLTPPLP Trigger: GGGAAGAGGTGGAGTTAGGTAAGACTTTCTGTCCCAGATAAGAAAGGGTGTATGTGGGGAAAGTGCCAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 72 bp | TGCAGCAGGGAAGAGCAGTTAACAGATTCTGAGGTCTaGGGACCAGGACCAGAGAAAAGAGAATTCTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: CSREEQLTDSEV*GPGPEKREFFC Trigger: ACAGAAGAATTCTCTTTTCTCTGGTCCTGGTCCCCAGACCTCAGAATCTGTTAACTGCTCTTCCCTGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CAA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATCTCACTGAGAATCTCTaGGCAAAGCAAAGCAACTAC | + |
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Preference number: 3 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNLTENL*AKQSNY Trigger: GTAGTTGCTTTGCTTTGCCAAGAGATTCTCAGTGAG...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CAA 90 bp | TATGAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGACAAATCCTATCAAGTaGTGCAAGAAATGGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: YESRLGFQEKQNMMPQHLTNPIK*CKKWQA Trigger: AGCCTGCCATTTCTTGCACAACTTGATAGGATTTGT...CAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CAA 90 bp | AGCAAAGCGTCAATGAGAATGATACATTCAAGTTTGGCAAGGAAGACTAAGGGATCTAAATGGCTGGGGTaGGGGTGCAGGCATTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: SKASMRMIHSSLARKTKGSKWLG*GCRHWD Trigger: ATCCCAATGCCTGCACCCCAACCCCAGCCATTTAGA...TCCCTTAGTCTTCCTTGCCAAACTTGAATGTATCATTCTCATTGACGCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CAA 90 bp | AGCAAAGCGTCAATGAGAATGATACATTCAAGTTTGGCAAGGAAGACTAAGGGAAACCTGAGGAGCAATTaGGCTCCCAGCCACTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SKASMRMIHSSLARKTKGNLRSN*APSHCS Trigger: TGAGCAGTGGCTGGGAGCCAAATTGCTCCTCAGGTT...TCCCTTAGTCTTCCTTGCCAAACTTGAATGTATCATTCTCATTGACGCTTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CAA 90 bp | TATGAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGTTACCCCAACCGAGCTaGACATTAACAAAAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: YESRLGFQEKQNMMPQHLLPQPS*TLTKRQ Trigger: TTGTCTTTTTGTTAATGTCAAGCTCGGTTGGGGTAA...CAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CAA 90 bp | ACCATGGAAACTCAAAAAGTCATTTGCCCAAAGTATGCAATTTCCAACGGTCTGCCAGGTTCAAATATTTaGGGGGATTTCCCACCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TMETQKVICPKYAISNGLPGSNI*GDFPPP Trigger: TGGGGGTGGGAAATCCCCCAAAATATTTGAACCTGG...CAGACCGTTGGAAATTGCATACTTTGGGCAAATGACTTTTTGAGTTTCCATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CAA 90 bp | ACCATGGAAACTCAAAAAGTCATTTGCCCAAAGTATGCAATTTCCAACGGTCTGAAAAGATCTAGTTCCTaGAGTCCATGGGGCCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TMETQKVICPKYAISNGLKRSSS*SPWGPW Trigger: CCAAGGGCCCCATGGACTCAAGGAACTAGATCTTTT...CAGACCGTTGGAAATTGCATACTTTGGGCAAATGACTTTTTGAGTTTCCATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR TCA 72 bp | GCAAAGCAACTACACAGAAAACCCAAAGTCCCTCCCTaGATACTGTTCCTTTCTCTGGTTTCTCAACAACAG | + |
|
Preference number: 3 (lower is better) Translates to: AKQLHRKPKVPP*ILFLSLVSQQQ Trigger: CTGTTGTTGAGAAACCAGAGAAAGGAACAGTATTCAGGGAGGGACTTTGGGTTTTCTGTGTAGTTGCTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR TCA 72 bp | TTCCCAGAAGTGTTAACTGCAAACCTTACACCTCACTaGGAATCTCTTGGCAAAGCAAAGCAACTACACAGA | + |
|
Preference number: 3 (lower is better) Translates to: FPEVLTANLTPH*ESLGKAKQLHR Trigger: TCTGTGTAGTTGCTTTGCTTTGCCAAGAGATTCTCAGTGAGGTGTAAGGTTTGCAGTTAACACTTCTGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR GCA 72 bp | CAATTTCCAACGGTCTGTGTAGTAATGCTTAGACATTaGAGAATTCCAAAATGGCACCCTGATATCACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QFPTVCVVMLRH*RIPKWHPDITP Trigger: AGGGGTGATATCAGGGTGCCATTTTGGAATTCTGCAATGTCTAAGCATTACTACACAGACCGTTGGAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 72 bp | CTGAGAGAAAAACAGCAGCTGCTAAATGGCTTCTTTTaGCAATGCTCAGGATATGTGATGGAAGTAGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: LREKQQLLNGFF*QCSGYVMEVGI Trigger: GATACCTACTTCCATCACATATCCTGAGCATTGCCAAAAGAAGCCATTTAGCAGCTGCTGTTTTTCTCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR-3UTR CAA 90 bp | ACCATGGAAACTCAAAAAGTCATTTGCCCAAAGTATGCAATTTCCAACGGTCTGCAATTCTTACCCAGGTaGAGAAACATGTACCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TMETQKVICPKYAISNGLQFLPR*RNMYPG Trigger: TCCTGGGTACATGTTTCTCAACCTGGGTAAGAATTG...CAGACCGTTGGAAATTGCATACTTTGGGCAAATGACTTTTTGAGTTTCCATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR GCA 72 bp | GAAAAACAGCAGCTGCTAAATGGCTTCTTTTGGCAATaGTCAGGATATGTGATGGAAGTAGGTATCTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: EKQQLLNGFFWQ*SGYVMEVGIYE Trigger: CTCATAGATACCTACTTCCATCACATATCCTGAGCATTGCCAAAAGAAGCCATTTAGCAGCTGCTGTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CCA 72 bp | CACATTTTCTGTTATCTTTCCCTTGGCCCAAAGTGTTaGCTGAAATTTGGATTTTCAGTCAGCTCTGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HIFCYLSLGPKC*LKFGFSVSSEN Trigger: GTTCTCAGAGCTGACTGAAAATCCAAATTTCAGCCAACACTTTGGGCCAAGGGAAAGATAACAGAAAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
||
| 3UTR TCA 72 bp | ATATTCATCATCTCATCCCTCAAGGAAGGACAATTGTaGGGCTTACAAAAATGTTCCCTGTGTCAATACCGA | + |
|
Preference number: 3 (lower is better) Translates to: IFIISSLKEGQL*GLQKCSLCQYR Trigger: TCGGTATTGACACAGGGAACATTTTTGTAAGCCTCACAATTGTCCTTCCTTGAGGGATGAGATGATGAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR GCA 72 bp | ATGCAAGACCAATTCAACCAAGCCCTGATTGCCTATTaGTTCAAATTCCCTCTTCAAAACCTAGAACCATAT | + |
|
Preference number: 3 (lower is better) Translates to: MQDQFNQALIAY*FKFPLQNLEPY Trigger: ATATGGTTCTAGGTTTTGAAGAGGGAATTTGAAGCAATAGGCAATCAGGGCTTGGTTGAATTGGTCTTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR GCA 72 bp | AGGATATATGCAAGACCAATTCAACCAAGCCCTGATTaGCTATTGCTTCAAATTCCCTCTTCAAAACCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RIYARPIQPSPD*LLLQIPSSKPR Trigger: TCTAGGTTTTGAAGAGGGAATTTGAAGCAATAGGCAATCAGGGCTTGGTTGAATTGGTCTTGCATATATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR GCA 72 bp | TTTCAAGCTAATTCTGTGTGCATGGTAATTCTTCACTaGCCTTCTAATATGAACAGTACTGCTTTGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: FQANSVCMVILH*PSNMNSTALHI Trigger: AATGTGCAAAGCAGTACTGTTCATATTAGAAGGGCAGTGAAGAATTACCATGCACACAGAATTAGCTTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR TCA 72 bp | AAAGTGTTGGCTGAAATTTGGATTTTCAGTCAGCTCTaGGAACTTCTTTATCAGATAGGTACATACAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: KVLAEIWIFSQL*ELLYQIGTYRL Trigger: AAGTCTGTATGTACCTATCTGATAAAGAAGTTCTCAGAGCTGACTGAAAATCCAAATTTCAGCCAACACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CCA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATGCTGGCAGGCCTCAGTaGCAGCCTCTGCTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNAGRPQ*QPLLSW Trigger: CCAAGAAAGCAGAGGCTGCCACTGAGGCCTGCCAGC...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR TCA 90 bp | AACTCCCTCTTGGCACTTTCCCCACATACACCCTTTCTTATCTGGGACAGAAAGCCTCTTGCCCTGAGCTaGGTGTACCTCTCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLLALSPHTPFLIWDRKPLALS*VYLSLP Trigger: TGGAAGGGAGAGGTACACTCAGCTCAGGGCAAGAGG...CTTTCTGTCCCAGATAAGAAAGGGTGTATGTGGGGAAAGTGCCAAGAGGGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR GCA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATGAGGCTAGGGAACCGTaGACAGATCCCATCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNEAREP*TDPINA Trigger: AGCATTGATGGGATCTGTGCACGGTTCCCTAGCCTC...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CCA 90 bp | AGTACTGCTTTGCACATTTTCTGTTATCTTTCCCTTGGCCCAAAGTGTTGGCTGGAAGAAGTTGGCAGCTaGCAGGCCTCAGTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: STALHIFCYLSLGPKCWLEEVGS*QASVAA Trigger: GGCTGCCACTGAGGCCTGCCAGCTGCCAACTTCTTC...CAGCCAACACTTTGGGCCAAGGGAAAGATAACAGAAAATGTGCAAAGCAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CCA 90 bp | TCAGCTAATCAAACCACCTCAGCATCTGTGCCCAATGCTCAAGCATCCTTCTCTATCTCCAGAAGAAGTTaGCAGCTGGCAGGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SANQTTSASVPNAQASFSISRRS*QLAGLS Trigger: ACTGAGGCCTGCCAGCTGCCAACTTCTTCTGGAGAT...AGAGAAGGATGCTTGAGCATTGGGCACAGATGCTGAGGTGGTTTGATTAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CCA 90 bp | AGTACTGCTTTGCACATTTTCTGTTATCTTTCCCTTGGCCCAAAGTGTTGGCTGTGGTTTGCCACAAGGTaGCACCTGTTCCTCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: STALHIFCYLSLGPKCWLWFATR*HLFLTV Trigger: CACCGTGAGGAACAGGTGCCACCTTGTGGCAAACCA...CAGCCAACACTTTGGGCCAAGGGAAAGATAACAGAAAATGTGCAAAGCAGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR GCA 90 bp | AACTCCCTCTTGGCACTTTCCCCACATACACCCTTTCTTATCTGGGACAGAAAGGGTCTCCATTCTTGCTaGCCAAGGTTGATGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSLLALSPHTPFLIWDRKGLHSC*PRLMKD Trigger: ATCCTTCATCAACCTTGGGCAGCAAGAATGGAGACC...CTTTCTGTCCCAGATAAGAAAGGGTGTATGTGGGGAAAGTGCCAAGAGGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR GCA 90 bp | AGTACTGCTTTGCACATTTTCTGTTATCTTTCCCTTGGCCCAAAGTGTTGGCTGCCCGGTCTCCATTCTTaGTGCCCAAGGTTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STALHIFCYLSLGPKCWLPGLHS*CPRLMK Trigger: CTTCATCAACCTTGGGCAGCAAGAATGGAGACCGGG...CAGCCAACACTTTGGGCCAAGGGAAAGATAACAGAAAATGTGCAAAGCAGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR GCA 90 bp | AGTACTGCTTTGCACATTTTCTGTTATCTTTCCCTTGGCCCAAAGTGTTGGCTGATGGCTATTTCACGATaGAGTGACCGCTGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STALHIFCYLSLGPKCWLMAISR*SDRCPS Trigger: AGAAGGGCAGCGGTCACTGCATCGTGAAATAGCCAT...CAGCCAACACTTTGGGCCAAGGGAAAGATAACAGAAAATGTGCAAAGCAGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR GCA 90 bp | ACCATGGAAACTCAAAAAGTCATTTGCCCAAAGTATGCAATTTCCAACGGTCTGGGACACAAGCCCTCTTaGCCTGAGCTGAGTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: TMETQKVICPKYAISNGLGHKPS*PELSVP Trigger: AGGTACACTCAGCTCAGGGCAAGAGGGCTTGTGTCC...CAGACCGTTGGAAATTGCATACTTTGGGCAAATGACTTTTTGAGTTTCCATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CCA 90 bp | ACCATGGAAACTCAAAAAGTCATTTGCCCAAAGTATGCAATTTCCAACGGTCTGTGTGTGACTTGTTGCTaGGGTCCCGGTCTCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TMETQKVICPKYAISNGLCVTCC*GPGLHS Trigger: AGAATGGAGACCGGGACCCCAGCAACAAGTCACACA...CAGACCGTTGGAAATTGCATACTTTGGGCAAATGACTTTTTGAGTTTCCATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CCA 90 bp | AGAGAGCTGCTGAAGCAACCCCCAGAAGTACAGCAAAGCGTCAATGAGAATGATAGGAAATTTAGCCACTaGTCCAATACTGGAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RELLKQPPEVQQSVNENDRKFSH*SNTGGL Trigger: CAATCCTCCAGTATTGGACCAGTGGCTAAATTTCCT...ATCATTCTCATTGACGCTTTGCTGTACTTCTGGGGGTTGCTTCAGCAGCTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CCA 90 bp | AGTACTGCTTTGCACATTTTCTGTTATCTTTCCCTTGGCCCAAAGTGTTGGCTGGTTTCCATAGGGCAATaGCTATTTCACGATGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: STALHIFCYLSLGPKCWLVSIGQ*LFHDAV Trigger: CACTGCATCGTGAAATAGCCATTGCCCTATGGAAAC...CAGCCAACACTTTGGGCCAAGGGAAAGATAACAGAAAATGTGCAAAGCAGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CAA 72 bp | AAACAGAACATGATGCCCCAACACCTGAATCAGAACTaGGTTTTTCAGCTAATCAAACCACCTCAGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQNMMPQHLNQN*VFQLIKPPQHL Trigger: CAGATGCTGAGGTGGTTTGATTAGCTGAAAAACCAAGTTCTGATTCAGGTGTTGGGGCATCATGTTCTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| 3UTR CAA 72 bp | GCTGAGAGAAAAACAGCAGCTGCTAAATGGCTTCTTTaGGCAATGCTCAGGATATGTGATGGAAGTAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AERKTAAAKWLL*AMLRICDGSRY Trigger: ATACCTACTTCCATCACATATCCTGAGCATTGCCAAAAGAAGCCATTTAGCAGCTGCTGTTTTTCTCTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CAA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATCGCCTGCTGTGTGACTaGTTGCTGGGGTCCCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNRLLCD*LLGSRS Trigger: AGACCGGGACCCCAGCAACAAGTCACACAGCAGGCG...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CAA 90 bp | GAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGAATTCCTTCCTGGTGAATTaGCACATGGTAGCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESRLGFQEKQNMMPQHLNSFLVN*HMVAAW Trigger: CCAGGCTGCTACCATGTGCAAATTCACCAGGAAGGA...ATTCAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CAA 90 bp | TATGAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGTCTTGCTGCCCAAGGTaGATGAAGGATTCTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: YESRLGFQEKQNMMPQHLSCCPR*MKDSCT Trigger: AGTGCAAGAATCCTTCATCAACCTTGGGCAGCAAGA...CAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CAA 90 bp | CAGAAACTTTTGTTTCCCAGAAGTGTTAACTGCAAACCTTACACCTCACTGAGACTGCTGTGTGACTTGTaGCTGGGGTCCCGGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QKLLFPRSVNCKPYTSLRLLCDL*LGSRSP Trigger: TGGAGACCGGGACCCCAGCAACAAGTCACACAGCAG...TCTCAGTGAGGTGTAAGGTTTGCAGTTAACACTTCTGGGAAACAAAAGTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CAA 90 bp | AACTCCCTCTTGGCACTTTCCCCACATACACCCTTTCTTATCTGGGACAGAAAGGCTTTCTTGGTCCCATaGACAAGAATATCCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLLALSPHTPFLIWDRKAFLVP*TRISPA Trigger: AGCTGGGGATATTCTTGTCAATGGGACCAAGAAAGC...CTTTCTGTCCCAGATAAGAAAGGGTGTATGTGGGGAAAGTGCCAAGAGGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CAA 90 bp | AGCAAAGCGTCAATGAGAATGATACATTCAAGTTTGGCAAGGAAGACTAAGGGATCCCGGTCTCCATTCTaGCTGCCCAAGGTTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: SKASMRMIHSSLARKTKGSRSPF*LPKVDE Trigger: TTCATCAACCTTGGGCAGCAAGAATGGAGACCGGGA...TCCCTTAGTCTTCCTTGCCAAACTTGAATGTATCATTCTCATTGACGCTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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| CDS-3UTR CAA 90 bp | TATGAGAGCAGGCTGGGTTTCCAAGAGAAACAGAACATGATGCCCCAACACCTGTCCAATACTGGAGGATaGTTCTGTGTAAATACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: YESRLGFQEKQNMMPQHLSNTGG*FCVNTS Trigger: ACTAGTATTTACACAGAACAATCCTCCAGTATTGGA...CAGGTGTTGGGGCATCATGTTCTGTTTCTCTTGGAAACCCAGCCTGCTCTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
||
| CDS-3UTR CAA 90 bp | CAGAAACTTTTGTTTCCCAGAAGTGTTAACTGCAAACCTTACACCTCACTGAGAGCAGCCTCTGCTTTCTaGGTCCCATTGACAAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: QKLLFPRSVNCKPYTSLRAASAF*VPLTRI Trigger: TATTCTTGTCAATGGGACCAAGAAAGCAGAGGCTGC...TCTCAGTGAGGTGTAAGGTTTGCAGTTAACACTTCTGGGAAACAAAAGTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059851.14 |
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