Pregenerated sensors for DCUN1D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038506Ensembl transcript IDs: ENSMUST00000045366.10, ENSMUST00000110838.8, ENSMUST00000110839.10, ENSMUST00000110840.8, ENSMUST00000203467.3, ENSMUST00000203604.2
Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GAGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTaGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATGCCTTCAC | + |
Preference number: 1 (lower is better) Translates to: EVRGQLEKSLLPSTT*LAGTELRLGSTCLH Trigger: GTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR GCA 90 bp | GTGAGATTCCCGTTCATTAGCAATGTCCACCTCGTAGGGCACGCATaGCTCAGAGCTGCTTCCTACCCCAGGAGCAGGCCCCAGTACCAG | + |
Preference number: 1 (lower is better) Translates to: VRFPFISNVHLVGHA*LRAASYPRSRPQYQ Trigger: CTGGTACTGGGGCCTGCTCCTGGGGTAGGAAGCAGCTCTGAGGCATGCGTGCCCTACGAGGTGGACATTGCTAATGAACGGGAATCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR TCA 90 bp | CCAGTCTTGCCCATGAGTGCATGCTGGCTGGGGTCACAAATGGAGTaGGACAAGTGTTCCCCACCAGGCCACAGGATGTGCTGTGGGAAG | + |
Preference number: 1 (lower is better) Translates to: PVLPMSACWLGSQME*DKCSPPGHRMCCGK Trigger: CTTCCCACAGCACATCCTGTGGCCTGGTGGGGAACACTTGTCTCACTCCATTTGTGACCCCAGCCAGCATGCACTCATGGGCAAGACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR TCA 90 bp | ACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTaGACTCAGGCTGGGCAGCACATGCCTTCACCTGCTCAATCATAT | + |
Preference number: 1 (lower is better) Translates to: TGEVTSPLHHVARRD*TQAGQHMPSPAQSY Trigger: ATATGATTGAGCAGGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR TCA 90 bp | GTGCTGTGGCTCTCTGTAAGCAGCGGACCTGTGCAGCCTCCTGCTTaGTGCCTGATGCTTCTGTGCTCACACTCTAACCTGATGGCTGTG | + |
Preference number: 1 (lower is better) Translates to: VLWLSVSSGPVQPPA*CLMLLCSHSNLMAV Trigger: CACAGCCATCAGGTTAGAGTGTGAGCACAGAAGCATCAGGCATCAAGCAGGAGGCTGCACAGGTCCGCTGCTTACAGAGAGCCACAGCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR TCA 90 bp | AGGCAAACAGTGGCATTCTGCTGTGTCCATGATGTGGCGGGTGGGTaGCTCCTTCTGATTTCTAGACCTGTGGCCGCGGAGCTCTCTGGA | + |
Preference number: 1 (lower is better) Translates to: RQTVAFCCVHDVAGG*LLLISRPVAAELSG Trigger: TCCAGAGAGCTCCGCGGCCACAGGTCTAGAAATCAGAAGGAGTCACCCACCCGCCACATCATGGACACAGCAGAATGCCACTGTTTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR CCA 90 bp | CGATCTGACTGCCCTGCTCTGTCCTCTGTCCTCTTAGGCAAACAGTaGCATTCTGCTGTGTCCATGATGTGGCGGGTGGGTGACTCCTTC | + |
Preference number: 1 (lower is better) Translates to: RSDCPALSSVLLGKQ*HSAVSMMWRVGDSF Trigger: GAAGGAGTCACCCACCCGCCACATCATGGACACAGCAGAATGCCACTGTTTGCCTAAGAGGACAGAGGACAGAGCAGGGCAGTCAGATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR TCA 90 bp | TGGCATTCTGCTGTGTCCATGATGTGGCGGGTGGGTGACTCCTTCTaGTTTCTAGACCTGTGGCCGCGGAGCTCTCTGGAGAACATCTCT | + |
Preference number: 1 (lower is better) Translates to: WHSAVSMMWRVGDSF*FLDLWPRSSLENIS Trigger: AGAGATGTTCTCCAGAGAGCTCCGCGGCCACAGGTCTAGAAATCAGAAGGAGTCACCCACCCGCCACATCATGGACACAGCAGAATGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR GCA 90 bp | TCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATaGCTTCACCTGCTCAATCATATCACTGCTCCTTTCCCTGAAGAA | + |
Preference number: 1 (lower is better) Translates to: STTWLAGTELRLGST*LHLLNHITAPFPEE Trigger: TTCTTCAGGGAAAGGAGCAGTGATATGATTGAGCAGGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR CCA 90 bp | GTGGGAAGCATGGCCTTCTTTCACTGTCGAGACGGTGTGAAGGTCTaGGTAGCCCTGCTGTCACCAGGGCTGTTGTTTGTGGACCCAAAA | + |
Preference number: 1 (lower is better) Translates to: VGSMAFFHCRDGVKV*VALLSPGLLFVDPK Trigger: TTTTGGGTCCACAAACAACAGCCCTGGTGACAGCAGGGCTACCCAGACCTTCACACCGTCTCGACAGTGAAAGAAGGCCATGCTTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR GCA 90 bp | GCTAAACTGGCTGTCCCTACAAGACAGGGTCTAGCACAGCCAGTGTaGCTGCCTCAAGGCACCACACAAAAGCCTCCTGTCCTTCTGTAT | + |
Preference number: 1 (lower is better) Translates to: AKLAVPTRQGLAQPV*LPQGTTQKPPVLLY Trigger: ATACAGAAGGACAGGAGGCTTTTGTGTGGTGCCTTGAGGCAGGCACACTGGCTGTGCTAGACCCTGTCTTGTAGGGACAGCCAGTTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR GCA 90 bp | AGAGAGGGGAGTGAAATGCCCAAAGCTACCAGTCTTGCCCATGAGTaGATGCTGGCTGGGGTCACAAATGGAGTGAGACAAGTGTTCCCC | + |
Preference number: 1 (lower is better) Translates to: REGSEMPKATSLAHE*MLAGVTNGVRQVFP Trigger: GGGGAACACTTGTCTCACTCCATTTGTGACCCCAGCCAGCATGCACTCATGGGCAAGACTGGTAGCTTTGGGCATTTCACTCCCCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR TCA 90 bp | CCCCTGCCAACATTCAGTTTGAGAAGTACCCAGCTGACATCGATCTaGCTGCCCTGCTCTGTCCTCTGTCCTCTTAGGCAAACAGTGGCA | + |
Preference number: 1 (lower is better) Translates to: PLPTFSLRSTQLTSI*LPCSVLCPLRQTVA Trigger: TGCCACTGTTTGCCTAAGAGGACAGAGGACAGAGCAGGGCAGTCAGATCGATGTCAGCTGGGTACTTCTCAAACTGAATGTTGGCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR TCA 90 bp | TTAAGCAGAGTAAGGGTTTGCTTCATGAGTGGACGAGGAAGACTCTaGGGTCAGCGACAAATGCACACAGCAACCCACGCAGCTGTCTCC | + |
Preference number: 1 (lower is better) Translates to: LSRVRVCFMSGRGRL*GQRQMHTATHAAVS Trigger: GGAGACAGCTGCGTGGGTTGCTGTGTGCATTTGTCGCTGACCTCAGAGTCTTCCTCGTCCACTCATGAAGCAAACCCTTACTCTGCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR TCA 90 bp | GTCTTCAGAGGAGACAGCAGGATAAGAGCTGCTGAGATTTACAGCTaGTGGACAAACTCTGGTGCAGCTCCCATCCACACCTCTGTGCTG | + |
Preference number: 1 (lower is better) Translates to: VFRGDSRIRAAEIYS*WTNSGAAPIHTSVL Trigger: CAGCACAGAGGTGTGGATGGGAGCTGCACCAGAGTTTGTCCATCAGCTGTAAATCTCAGCAGCTCTTATCCTGCTGTCTCCTCTGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR GCA 90 bp | AGGGCACCACTAGACAAGATCCAGTCCACCCTAGAGTCCGGAACGTaGTACAAGTGTGGTTCTGGCATGAAGAACACTGGGTTTGGAAGT | + |
Preference number: 1 (lower is better) Translates to: RAPLDKIQSTLESGT*YKCGSGMKNTGFGS Trigger: ACTTCCAAACCCAGTGTTCTTCATGCCAGAACCACACTTGTAGCACGTTCCGGACTCTAGGGTGGACTGGATCTTGTCTAGTGGTGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR GCA 90 bp | GGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATGCCTTCACCTaGTCAATCATATCACTGCTCCTTTCCCTGAAGAATGTTAAATCT | + |
Preference number: 1 (lower is better) Translates to: GSQGLNSGWAAHAFT*SIISLLLSLKNVKS Trigger: AGATTTAACATTCTTCAGGGAAAGGAGCAGTGATATGATTGAGCAGGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR CCA 90 bp | CTTAGCGAAGGTGAAGGTAAACTGGTAAAGGTCCTTGAACTTGGCTaGGTCCTTAAGCTCTTGCTCCAGTCTGGGGAGAAGAGCTTTCAG | + |
Preference number: 1 (lower is better) Translates to: LSEGEGKLVKVLELG*VLKLLLQSGEKSFQ Trigger: CTGAAAGCTCTTCTCCCCAGACTGGAGCAAGAGCTTAAGGACCCAGCCAAGTTCAAGGACCTTTACCAGTTTACCTTCACCTTCGCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
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3UTR TCA 90 bp | ATACCAAGATTAAAAGCAGTGGGCTCTCGGGCAAGGCCACCTTCCTaGGGCGTGTGTTTAACAGCTTGGACTTGTGTAAAAGATACGTCA | + |
Preference number: 1 (lower is better) Translates to: IPRLKAVGSRARPPS*GVCLTAWTCVKDTS Trigger: TGACGTATCTTTTACACAAGTCCAAGCTGTTAAACACACGCCTCAGGAAGGTGGCCTTGCCCGAGAGCCCACTGCTTTTAATCTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR CCA 90 bp | AAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTaGTTACGTACGCTCTCAAAGATGTCCCGGTTGTCCCTTGACAGA | + |
Preference number: 1 (lower is better) Translates to: KAWKEVVFQVFTKSV*LRTLSKMSRLSLDR Trigger: TCTGTCAAGGGACAACCGGGACATCTTTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | CAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCGTGGCTCGCAGGGACTaGACTCAGGCTGGGCAGCAC | + |
Preference number: 2 (lower is better) Translates to: QLEKSLLPSTTWLAGTELVARRD*TQAGQH Trigger: GTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCAC...GAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | CCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATGCCTTCACCCGTAACGTCAGGAGCTaGACAGCAAGCTCTCAGCCC | + |
Preference number: 2 (lower is better) Translates to: PPRGSQGLNSGWAAHAFTRNVRS*TASSQP Trigger: GGGCTGAGAGCTTGCTGTCCAGCTCCTGACGTTACG...GGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | CCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATGCCTTCACCGCAAGGCCACCTTCCTaGGGCGTGTGTTTAACAGCT | + |
Preference number: 2 (lower is better) Translates to: PPRGSQGLNSGWAAHAFTARPPS*GVCLTA Trigger: AGCTGTTAAACACACGCCTCAGGAAGGTGGCCTTGC...GGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | AACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGTGGCTCGCAGGGACTaGACTCAGGCTGGGCAGCAC | + |
Preference number: 2 (lower is better) Translates to: NWRSHFSPPPRGSQGLNSVARRD*TQAGQH Trigger: GTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCAC...TGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | AATGTCCACCTCGTAGGGCACGCATGCCTCAGAGCTGCTTCCTACCCCAGGAGCCGCATGCCTCAGAGCTaGTTCCTACCCCAGGAGCAG | + |
Preference number: 2 (lower is better) Translates to: NVHLVGHACLRAASYPRSRMPQS*FLPQEQ Trigger: CTGCTCCTGGGGTAGGAAGCAGCTCTGAGGCATGCG...GCTCCTGGGGTAGGAAGCAGCTCTGAGGCATGCGTGCCCTACGAGGTGGACATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | AACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCACCAGGCGCAGACAGGTaGGACAGGGCTTTGGGTGTG | + |
Preference number: 2 (lower is better) Translates to: NWRSHFSPPPRGSQGLNSPGADR*DRALGV Trigger: CACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGG...TGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | ATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGTGGCTCGCAGGGACTaGACTCAGGCTGGGCAGCAC | + |
Preference number: 2 (lower is better) Translates to: MCGGQRTTGEVTSPLHHVVARRD*TQAGQH Trigger: GTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCAC...CACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | AGCTCCCATCCACACCTCTGTGCTGTGGCTCTCTGTAAGCAGCGGACCTGTGCACACCCTGGCTGGCCTTaGACTCCCAGAGACTTGCCT | + |
Preference number: 2 (lower is better) Translates to: SSHPHLCAVALCKQRTCAHPGWP*TPRDLP Trigger: AGGCAAGTCTCTGGGAGTTCAAGGCCAGCCAGGGTG...TGCACAGGTCCGCTGCTTACAGAGAGCCACAGCACAGAGGTGTGGATGGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR-3UTR GCA 90 bp | ACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGATTCGCTGGACCTATCCTGTaGCAGCCACCCTGTGCAAAC | + |
Preference number: 2 (lower is better) Translates to: TRHRPRRRQVRQGFGCGFAGPIL*QPPCAN Trigger: GTTTGCACAGGGTGGCTGGCACAGGATAGGTCCAGC...GAATCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | GAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGCTGGACCTATCCTGTaGCAGCCACCCTGTGCAAAC | + |
Preference number: 2 (lower is better) Translates to: EKSLLPSTTWLAGTELRLAGPIL*QPPCAN Trigger: GTTTGCACAGGGTGGCTGGCACAGGATAGGTCCAGC...CAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | ATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGCCAGGCGCAGACAGGTaGGACAGGGCTTTGGGTGTG | + |
Preference number: 2 (lower is better) Translates to: MCGGQRTTGEVTSPLHHVPGADR*DRALGV Trigger: CACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGG...CACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | GTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGCCCTCTATGCCTGTGCCAGGCGCAGACAGGTaGGACAGGGCTTTGGGTGTG | + |
Preference number: 2 (lower is better) Translates to: VRSLTPDEQVGSRPSMPVPGADR*DRALGV Trigger: CACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGG...CACAGGCATAGAGGGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | GCTCTCTGTAAGCAGCGGACCTGTGCAGCCTCCTGCTTGATGCCTGATGCTTCTGAGACTTGCCTGCCTTaGCCTCCTGGGTGCTGGGAT | + |
Preference number: 2 (lower is better) Translates to: ALCKQRTCAASCLMPDASETCLP*PPGCWD Trigger: ATCCCAGCACCCAGGAGGGCAAGGCAGGCAAGTCTC...AGAAGCATCAGGCATCAAGCAGGAGGCTGCACAGGTCCGCTGCTTACAGAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR-3UTR CCA 90 bp | GTGACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGAGGTGAGACAGGGCTTTaGGTGTGGATTCCTTCTGGA | + |
Preference number: 2 (lower is better) Translates to: VTRHRPRRRQVRQGFGCGGETGL*VWIPSG Trigger: TCCAGAAGGAATCCACACCCAAAGCCCTGTCTCACC...TCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | AGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTaGGCAGCACATGCCTTCACC | + |
Preference number: 2 (lower is better) Translates to: RSEDNWRSHFSPPPRGSQGLNSG*AAHAFT Trigger: GGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCC...CTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | AGCACTAGGTCTGCCCATGTCCCCGATGTCCCGAGGCGCTTCTGTGTGTCTGCACCCGCCTGTGACCACTaGCCGTGCGTATTCTACAAA | + |
Preference number: 2 (lower is better) Translates to: STRSAHVPDVPRRFCVSAPACDH*PCVFYK Trigger: TTTGTAGAATACGCACGGCCAGTGGTCACAGGCGGG...TGCAGACACACAGAAGCGCCTCGGGACATCGGGGACATGGGCAGACCTAGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | ACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGATTCCCCGCCTGTGACCACTaGCCGTGCGTATTCTACAAA | + |
Preference number: 2 (lower is better) Translates to: TRHRPRRRQVRQGFGCGFPACDH*PCVFYK Trigger: TTTGTAGAATACGCACGGCCAGTGGTCACAGGCGGG...GAATCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | CAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAAGCTTGACACCAGATaGGCAGGTAGGATCCAGGCC | + |
Preference number: 2 (lower is better) Translates to: QLEKSLLPSTTWLAGTELKLDTR*AGRIQA Trigger: GGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTT...GAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | GAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGAAGTCTTGGCAAGTGTaGGGTAGGGTCAGCACAGTG | + |
Preference number: 2 (lower is better) Translates to: EKSLLPSTTWLAGTELRLKSWQV*GRVSTV Trigger: CACTGTGCTGACCCTACCTCACACTTGCCAAGACTT...CAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | GAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGTGCCAGCCACCCTGTaGAAACTGCAACAGTCTCTT | + |
Preference number: 2 (lower is better) Translates to: EKSLLPSTTWLAGTELRLVPATL*KLQQSL Trigger: AAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGCAC...CAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | GAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGAGGCTGGGCAGCACATaGCTTCACCTGCTCAATCAT | + |
Preference number: 2 (lower is better) Translates to: EKSLLPSTTWLAGTELRLRLGST*LHLLNH Trigger: ATGATTGAGCAGGTGAAGGCATGTGCTGCCCAGCCT...CAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | GGTGACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGAAATCTAAGCCCTTCTaGCCAGGGTTCTTAGCGAAG | + |
Preference number: 2 (lower is better) Translates to: GDTAQTQAQTGETGLWVWKSKPF*PGFLAK Trigger: CTTCGCTAAGAACCCTGGGCAGAAGGGCTTAGATTT...CCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | AACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCACGTAACGTCAGGAGCTaGACAGCAAGCTCTCAGCCC | + |
Preference number: 2 (lower is better) Translates to: NWRSHFSPPPRGSQGLNSRNVRS*TASSQP Trigger: GGGCTGAGAGCTTGCTGTCCAGCTCCTGACGTTACG...TGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | AACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGCAAGGCCACCTTCCTaGGGCGTGTGTTTAACAGCT | + |
Preference number: 2 (lower is better) Translates to: NWRSHFSPPPRGSQGLNSARPPS*GVCLTA Trigger: AGCTGTTAAACACACGCCTCAGGAAGGTGGCCTTGC...TGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | GTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGCCCTCTATGCCTGTGCGTAACGTCAGGAGCTaGACAGCAAGCTCTCAGCCC | + |
Preference number: 2 (lower is better) Translates to: VRSLTPDEQVGSRPSMPVRNVRS*TASSQP Trigger: GGGCTGAGAGCTTGCTGTCCAGCTCCTGACGTTACG...CACAGGCATAGAGGGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | GAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGAGGTCAGAGGACAACTaGAGAAGTCACTTCTCCCCT | + |
Preference number: 2 (lower is better) Translates to: EKSLLPSTTWLAGTELRLRSEDN*RSHFSP Trigger: AGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCT...CAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | GAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGTTCATGGCACATGTGTaGAGGTCAGAGGACAACTGG | + |
Preference number: 2 (lower is better) Translates to: EKSLLPSTTWLAGTELRLFMAHV*RSEDNW Trigger: CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAA...CAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | GAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGTGCATGAGTGCACGCTaGCCAGAAAAACACTGGAAA | + |
Preference number: 2 (lower is better) Translates to: EKSLLPSTTWLAGTELRLCMSAR*PEKHWK Trigger: TTTCCAGTGTTTTTCTGGTCAGCGTGCACTCATGCA...CAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | ACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGATTCCTAGCAGAGTAAGGGTTTaGTTCATGAGTGGACGAGGA | + |
Preference number: 2 (lower is better) Translates to: TAQTQAQTGETGLWVWIPSRVRV*FMSGRG Trigger: TCCTCGTCCACTCATGAAGCAAACCCTTACTCTGCT...AGGAATCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | ACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGATTCAGCAGAGTAAGGGTTTaGTTCATGAGTGGACGAGGA | + |
Preference number: 2 (lower is better) Translates to: TRHRPRRRQVRQGFGCGFSRVRV*FMSGRG Trigger: TCCTCGTCCACTCATGAAGCAAACCCTTACTCTGCT...GAATCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | CACAGTGATGTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGCCCTCTGCTGGACCTATCCTGTaGCAGCCACCCTGTGCAAAC | + |
Preference number: 2 (lower is better) Translates to: HSDVRSLTPDEQVGSRPSAGPIL*QPPCAN Trigger: GTTTGCACAGGGTGGCTGGCACAGGATAGGTCCAGC...AGAGGGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAACATCACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | AACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCATGGCTTTCGAAGGGCTaGACACTGGGCACTGAAAAC | + |
Preference number: 2 (lower is better) Translates to: NWRSHFSPPPRGSQGLNSWLSKG*TLGTEN Trigger: GTTTTCAGTGCCCAGTGTCCAGCCCTTCGAAAGCCA...TGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | AACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGAGGGGCTGGCTTTGTaGAGACTGGTTTCCAGTTCT | + |
Preference number: 2 (lower is better) Translates to: NWRSHFSPPPRGSQGLNSEGLAL*RLVSSS Trigger: AGAACTGGAAACCAGTCTCCACAAAGCCAGCCCCTC...TGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | CAGTTTGAGAAGTACCCAGCTGACATCGATCTGACTGCCCTGCTCTGTCCTCTGGCTGTGTCCATGATGTaGCGGGTGGGTGACTCCTTC | + |
Preference number: 2 (lower is better) Translates to: QFEKYPADIDLTALLCPLAVSMM*RVGDSF Trigger: GAAGGAGTCACCCACCCGCCACATCATGGACACAGC...CAGAGGACAGAGCAGGGCAGTCAGATCGATGTCAGCTGGGTACTTCTCAAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR TCA 90 bp | GGTCAGCACAGTGATGTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGGGACGAGGAAGACTCTaGGGTCAGCGACAAATGCAC | + |
Preference number: 2 (lower is better) Translates to: GQHSDVRSLTPDEQVGSRGRGRL*GQRQMH Trigger: GTGCATTTGTCGCTGACCTCAGAGTCTTCCTCGTCC...CCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAACATCACTGTGCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | TGCTTTCTGTGTTTAGGCATTGACGAGTCCCCTGTCCTGAAGTGGGCCCAGCATGCAAGGCCACCTTCCTaGGGCGTGTGTTTAACAGCT | + |
Preference number: 2 (lower is better) Translates to: CFLCLGIDESPVLKWAQHARPPS*GVCLTA Trigger: AGCTGTTAAACACACGCCTCAGGAAGGTGGCCTTGC...ATGCTGGGCCCACTTCAGGACAGGGGACTCGTCAATGCCTAAACACAGAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | AGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGTGCATGAGTGCACGCTaGCCAGAAAAACACTGGAAA | + |
Preference number: 2 (lower is better) Translates to: RSEDNWRSHFSPPPRGSQCMSAR*PEKHWK Trigger: TTTCCAGTGTTTTTCTGGTCAGCGTGCACTCATGCA...CTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | CAGTTTGAGAAGTACCCAGCTGACATCGATCTGACTGCCCTGCTCTGTCCTCTGCTCACTATGTCACCCTaGCTGGCCTTGAACTCCCAG | + |
Preference number: 2 (lower is better) Translates to: QFEKYPADIDLTALLCPLLTMSP*LALNSQ Trigger: CTGGGAGTTCAAGGCCAGCCAGGGTGACATAGTGAG...CAGAGGACAGAGCAGGGCAGTCAGATCGATGTCAGCTGGGTACTTCTCAAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR CAA 90 bp | CGAGACGGTGTGAAGGTCTGGGTAGCCCTGCTGTCACCAGGGCTGTaGTTTGTGGACCCAAAACTTGTTCTTGCACACTCTACTCACTTC | + |
Preference number: 2 (lower is better) Translates to: RDGVKVWVALLSPGL*FVDPKLVLAHSTHF Trigger: GAAGTGAGTAGAGTGTGCAAGAACAAGTTTTGGGTCCACAAACAACAGCCCTGGTGACAGCAGGGCTACCCAGACCTTCACACCGTCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR GCA 90 bp | GGTCAGCACAGTGATGTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGGTGCCAGCCACCCTGTaGAAACTGCAACAGTCTCTT | + |
Preference number: 2 (lower is better) Translates to: GQHSDVRSLTPDEQVGSRVPATL*KLQQSL Trigger: AAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGCAC...CCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAACATCACTGTGCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | AATGTCCACCTCGTAGGGCACGCATGCCTCAGAGCTGCTTCCTACCCCAGGAGCAGCACATATGGGGCATaGTTTCTGTGTTTAGGCATT | + |
Preference number: 2 (lower is better) Translates to: NVHLVGHACLRAASYPRSSTYGA*FLCLGI Trigger: AATGCCTAAACACAGAAAGCATGCCCCATATGTGCT...GCTCCTGGGGTAGGAAGCAGCTCTGAGGCATGCGTGCCCTACGAGGTGGACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | GGAACGTGCTACAAGTGTGGTTCTGGCATGAAGAACACTGGGTTTGGAAGTCTTGAACTCCCAGAGACTTaGCTGCCTTGCCCTCCTGGG | + |
Preference number: 2 (lower is better) Translates to: GTCYKCGSGMKNTGFGSLELPET*LPCPPG Trigger: CCCAGGAGGGCAAGGCAGGCAAGTCTCTGGGAGTTC...AAGACTTCCAAACCCAGTGTTCTTCATGCCAGAACCACACTTGTAGCACGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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3UTR-3UTR CCA 90 bp | GGTCAGCACAGTGATGTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGGGTGAGACAGGGCTTTaGGTGTGGATTCCTTCTGGA | + |
Preference number: 2 (lower is better) Translates to: GQHSDVRSLTPDEQVGSRGETGL*VWIPSG Trigger: TCCAGAAGGAATCCACACCCAAAGCCCTGTCTCACC...CCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAACATCACTGTGCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | AACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGAACCCACAAAGCCTaGAAGGAAGTTGTTTTCCAG | + |
Preference number: 2 (lower is better) Translates to: NWRSHFSPPPRGSQGLNSGTHKA*KEVVFQ Trigger: CTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCC...TGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | CACAGTGATGTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGCCCTCTAACATCATAGACAGGTaGCGGGAACTGGTGCATCTG | + |
Preference number: 2 (lower is better) Translates to: HSDVRSLTPDEQVGSRPSNIIDR*RELVHL Trigger: CAGATGCACCAGTTCCCGTCACCTGTCTATGATGTT...AGAGGGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAACATCACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | TGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTGCTGGACCTATCCTGTaGCAGCCACCCTGTGCAAAC | + |
Preference number: 2 (lower is better) Translates to: CISWHMCGGQRTTGEVTSAGPIL*QPPCAN Trigger: GTTTGCACAGGGTGGCTGGCACAGGATAGGTCCAGC...AGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | TGTGGGGAGTACATGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGAGGCTGGGCAGCACATaGCTTCACCTGCTCAATCAT | + |
Preference number: 2 (lower is better) Translates to: CGEYMHFMAHVWRSEDNWRLGST*LHLLNH Trigger: ATGATTGAGCAGGTGAAGGCATGTGCTGCCCAGCCT...CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | TGTGGGGAGTACATGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGGGTGAGACAGGGCTTTaGGTGTGGATTCCTTCTGGA | + |
Preference number: 2 (lower is better) Translates to: CGEYMHFMAHVWRSEDNWGETGL*VWIPSG Trigger: TCCAGAAGGAATCCACACCCAAAGCCCTGTCTCACC...CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | TGTGGGGAGTACATGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGGAGGGGCTGGCTTTGTaGAGACTGGTTTCCAGTTCT | + |
Preference number: 2 (lower is better) Translates to: CGEYMHFMAHVWRSEDNWEGLAL*RLVSSS Trigger: AGAACTGGAAACCAGTCTCCACAAAGCCAGCCCCTC...CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | TGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTGGACTGAACTCAGGCTaGGCAGCACATGCCTTCACC | + |
Preference number: 2 (lower is better) Translates to: CISWHMCGGQRTTGEVTSGLNSG*AAHAFT Trigger: GGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCC...AGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | CGGAGCTCTCTGGAGAACATCTCTAGTTTGGTATTACCCGAGATGAGAACCTGGCCCATGAGTGCATGCTaGCTGGGGTCACAAATGGAG | + |
Preference number: 2 (lower is better) Translates to: RSSLENISSLVLPEMRTWPMSAC*LGSQME Trigger: CTCCATTTGTGACCCCAGCCAGCATGCACTCATGGG...CCAGGTTCTCATCTCGGGTAATACCAAACTAGAGATGTTCTCCAGAGAGCTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR CAA 90 bp | CCCTGCTGTCACCAGGGCTGTTGTTTGTGGACCCAAAACTTGTTCTaGCACACTCTACTCACTTCAGAGAGCTCACAGCTAAACTGGCTG | + |
Preference number: 2 (lower is better) Translates to: PCCHQGCCLWTQNLF*HTLLTSESSQLNWL Trigger: CAGCCAGTTTAGCTGTGAGCTCTCTGAAGTGAGTAGAGTGTGCAAGAACAAGTTTTGGGTCCACAAACAACAGCCCTGGTGACAGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR TCA 90 bp | TGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTGGACGAGGAAGACTCTaGGGTCAGCGACAAATGCAC | + |
Preference number: 2 (lower is better) Translates to: CISWHMCGGQRTTGEVTSGRGRL*GQRQMH Trigger: GTGCATTTGTCGCTGACCTCAGAGTCTTCCTCGTCC...AGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | TGTGCCAGCCACCCTGTGCAAACTGCAACAGTCTCTTCTAGAGAAAATGAAAGCGGACGAGGAAGACTCTaGGGTCAGCGACAAATGCAC | + |
Preference number: 2 (lower is better) Translates to: CASHPVQTATVSSRENESGRGRL*GQRQMH Trigger: GTGCATTTGTCGCTGACCTCAGAGTCTTCCTCGTCC...GCTTTCATTTTCTCTAGAAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | CAGTTTGAGAAGTACCCAGCTGACATCGATCTGACTGCCCTGCTCTGTCCTCTGCAGGATAAGAGCTGCTaGGATTTACAGCTGATGGAC | + |
Preference number: 2 (lower is better) Translates to: QFEKYPADIDLTALLCPLQDKSC*DLQLMD Trigger: GTCCATCAGCTGTAAATCTCAGCAGCTCTTATCCTG...CAGAGGACAGAGCAGGGCAGTCAGATCGATGTCAGCTGGGTACTTCTCAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR GCA 90 bp | AACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAAGCACATATGGGGCATaGTTTCTGTGTTTAGGCATT | + |
Preference number: 2 (lower is better) Translates to: NWRSHFSPPPRGSQGLNSSTYGA*FLCLGI Trigger: AATGCCTAAACACAGAAAGCATGCCCCATATGTGCT...TGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | GAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCAGCGCATGCCTCAGAGCTaGTTCCTACCCCAGGAGCAG | + |
Preference number: 2 (lower is better) Translates to: EVNYKSGTHKAWKEVVFQRMPQS*FLPQEQ Trigger: CTGCTCCTGGGGTAGGAAGCAGCTCTGAGGCATGCG...CTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | GAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCAGTCCCCTGTCCTGAAGTaGGCCCAGCATATCTGCCCC | + |
Preference number: 2 (lower is better) Translates to: EVNYKSGTHKAWKEVVFQSPVLK*AQHICP Trigger: GGGGCAGATATGCTGGGCCCACTTCAGGACAGGGGA...CTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | CGGAGCTCTCTGGAGAACATCTCTAGTTTGGTATTACCCGAGATGAGAACCTGGGTGCTGTGGGAAGCATaGCCTTCTTTCACTGTCGAG | + |
Preference number: 2 (lower is better) Translates to: RSSLENISSLVLPEMRTWVLWEA*PSFTVE Trigger: CTCGACAGTGAAAGAAGGCCATGCTTCCCACAGCAC...CCAGGTTCTCATCTCGGGTAATACCAAACTAGAGATGTTCTCCAGAGAGCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR CAA 90 bp | GTGAGACAGGGCTTTGGGTGTGGATTCCTTCTGGATGACGTATGTTaGCTTCCAAATGTATATGGCTTTCGAAGGGCTGGACACTGGGCA | + |
Preference number: 2 (lower is better) Translates to: VRQGFGCGFLLDDVC*LPNVYGFRRAGHWA Trigger: TGCCCAGTGTCCAGCCCTTCGAAAGCCATATACATTTGGAAGCAAACATACGTCATCCAGAAGGAATCCACACCCAAAGCCCTGTCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | GTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGCCCTCTATGCCTGTGGGAATTGATCTTTTGTaGTGCTCCAGCAGAAATGTG | + |
Preference number: 2 (lower is better) Translates to: VRSLTPDEQVGSRPSMPVGIDLL*CSSRNV Trigger: CACATTTCTGCTGGAGCATCACAAAAGATCAATTCC...CACAGGCATAGAGGGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | TTGTTTGTGGACCCAAAACTTGTTCTTGCACACTCTACTCACTTCAGAGAGCTCGTGCAGCCTCCTGCTTaGTGCCTGATGCTTCTGTGC | + |
Preference number: 2 (lower is better) Translates to: LFVDPKLVLAHSTHFRELVQPPA*CLMLLC Trigger: GCACAGAAGCATCAGGCATCAAGCAGGAGGCTGCAC...GAGCTCTCTGAAGTGAGTAGAGTGTGCAAGAACAAGTTTTGGGTCCACAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR GCA 90 bp | TCAGCCCTGCGAACAGGGTCTACGTTGCTTTCTCTAAAGACAAGTCATGCAGGCTGTGACCACTGGCCGTaGGTATTCTACAAAGTCATC | + |
Preference number: 2 (lower is better) Translates to: SALRTGSTLLSLKTSHAGCDHWP*VFYKVI Trigger: GATGACTTTGTAGAATACGCACGGCCAGTGGTCACA...GCCTGCATGACTTGTCTTTAGAGAAAGCAACGTAGACCCTGTTCGCAGGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110838.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | TGTTTGTGGACCCAAAACTTGTTCTTGCACACTCTACTCACTTCAGAGAGCTCACCTGCCTTGCCCTCCTaGGTGCTGGGATTAAACGTG | + |
Preference number: 2 (lower is better) Translates to: CLWTQNLFLHTLLTSESSPALPS*VLGLNV Trigger: CACGTTTAATCCCAGCACCCAGGAGGGCAAGGCAGG...TGAGCTCTCTGAAGTGAGTAGAGTGTGCAAGAACAAGTTTTGGGTCCACAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR CCA 90 bp | CAAACAAAAAGTGAGCTGGGCTGTAGTTCAGCTGTAGAGCACTTGTTTAGCATGGACGGTGTGAAGGTCTaGGTAGCCCTGCTGTCACCA | + |
Preference number: 2 (lower is better) Translates to: QTKSELGCSSAVEHLFSMDGVKV*VALLSP Trigger: TGGTGACAGCAGGGCTACCCAGACCTTCACACCGTC...CATGCTAAACAAGTGCTCTACAGCTGAACTACAGCCCAGCTCACTTTTTGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR GCA 90 bp | ACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGCGCTTCTGTGTGTCTaGACGTCAGCCACTGCAGCC | + |
Preference number: 2 (lower is better) Translates to: TKPGRKLFSRFSLSQFGYALLCV*TSATAA Trigger: GGCTGCAGTGGCTGACGTGCAGACACACAGAAGCGC...GTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | TTTGTGGACCCAAAACTTGTTCTTGCACACTCTACTCACTTCAGAGAGCTCACACACAGCCAGTGTGCCTaGCTCAAGGCACCACACAAA | + |
Preference number: 2 (lower is better) Translates to: FVDPKLVLAHSTHFRELTHSQCA*LKAPHK Trigger: TTTGTGTGGTGCCTTGAGGCAGGCACACTGGCTGTG...TGTGAGCTCTCTGAAGTGAGTAGAGTGTGCAAGAACAAGTTTTGGGTCCACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR CCA 90 bp | ACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACTCCCCTGTCCTGAAGTaGGCCCAGCATATCTGCCCC | + |
Preference number: 2 (lower is better) Translates to: TKPGRKLFSRFSLSQFGYSPVLK*AQHICP Trigger: GGGGCAGATATGCTGGGCCCACTTCAGGACAGGGGA...GTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | GAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCAGAAGTCTTGGCAAGTGTaGGGTAGGGTCAGCACAGTG | + |
Preference number: 2 (lower is better) Translates to: EVNYKSGTHKAWKEVVFQKSWQV*GRVSTV Trigger: CACTGTGCTGACCCTACCTCACACTTGCCAAGACTT...CTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | CCTGTGCCAGCCACCCTGTGCAAACTGCAACAGTCTCTTCTAGAGAAAATGAAAAGCAGAGTAAGGGTTTaGTTCATGAGTGGACGAGGA | + |
Preference number: 2 (lower is better) Translates to: PVPATLCKLQQSLLEKMKSRVRV*FMSGRG Trigger: TCCTCGTCCACTCATGAAGCAAACCCTTACTCTGCT...TTTCATTTTCTCTAGAAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | CAAACAAAAAGTGAGCTGGGCTGTAGTTCAGCTGTAGAGCACTTGTTTAGCATGATGGACAAACTCTGGTaGAGCTCCCATCCACACCTC | + |
Preference number: 2 (lower is better) Translates to: QTKSELGCSSAVEHLFSMMDKLW*SSHPHL Trigger: GAGGTGTGGATGGGAGCTGCACCAGAGTTTGTCCAT...CATGCTAAACAAGTGCTCTACAGCTGAACTACAGCCCAGCTCACTTTTTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR TCA 90 bp | CACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTAGCAAGGCCACCTTCCTaGGGCGTGTGTTTAACAGCT | + |
Preference number: 2 (lower is better) Translates to: HKAWKEVVFQVFTKSVWLARPPS*GVCLTA Trigger: AGCTGTTAAACACACGCCTCAGGAAGGTGGCCTTGC...TAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | GAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCAGAACATCATAGACAGGTaGCGGGAACTGGTGCATCTG | + |
Preference number: 2 (lower is better) Translates to: EVNYKSGTHKAWKEVVFQNIIDR*RELVHL Trigger: CAGATGCACCAGTTCCCGTCACCTGTCTATGATGTT...CTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | CATTCTGAGGACACAGGTGCTGCTTTGAAGCATAACTGTAACATGATTCCAGTTGGGTCCTTAAGCTCTTaGTCCAGTCTGGGGAGAAGA | + |
Preference number: 2 (lower is better) Translates to: HSEDTGAALKHNCNMIPVGSLSS*SSLGRR Trigger: TCTTCTCCCCAGACTGGAGCAAGAGCTTAAGGACCC...AACTGGAATCATGTTACAGTTATGCTTCAAAGCAGCACCTGTGTCCTCAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCTGGCTTTCGAAGGGCTaGACACTGGGCACTGAAAAC | + |
Preference number: 2 (lower is better) Translates to: TEVNYKSGTHKAWKEVVFWLSKG*TLGTEN Trigger: GTTTTCAGTGCCCAGTGTCCAGCCCTTCGAAAGCCA...GAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | AAAATAAGAAACTTCTCAGGAGGCAGCATCCAGGCCTATAGTGATAACCTCATTCCCGCCTGTGACCACTaGCCGTGCGTATTCTACAAA | + |
Preference number: 2 (lower is better) Translates to: KIRNFSGGSIQAYSDNLIPACDH*PCVFYK Trigger: TTTGTAGAATACGCACGGCCAGTGGTCACAGGCGGG...AATGAGGTTATCACTATAGGCCTGGATGCTGCCTCCTGAGAAGTTTCTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | AAAATAAGAAACTTCTCAGGAGGCAGCATCCAGGCCTATAGTGATAACCTCATTGCTCTTGCTCCAGTCTaGGGAGAAGAGCTTTCAGCC | + |
Preference number: 2 (lower is better) Translates to: KIRNFSGGSIQAYSDNLIALAPV*GEELSA Trigger: GGCTGAAAGCTCTTCTCCCCAGACTGGAGCAAGAGC...AATGAGGTTATCACTATAGGCCTGGATGCTGCCTCCTGAGAAGTTTCTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | TGTGCCAGCCACCCTGTGCAAACTGCAACAGTCTCTTCTAGAGAAAATGAAAGCAGCATAACTGTAACATaGTTCCAGTTTGGAAACGGC | + |
Preference number: 2 (lower is better) Translates to: CASHPVQTATVSSRENESSITVT*FQFGNG Trigger: GCCGTTTCCAAACTGGAATCATGTTACAGTTATGCT...GCTTTCATTTTCTCTAGAAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | TGTGGGGAGTACATGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGGGGAACTGGTGCATCTaGTTTGTAAATCTAATTCAT | + |
Preference number: 2 (lower is better) Translates to: CGEYMHFMAHVWRSEDNWGNWCI*FVNLIH Trigger: ATGAATTAGATTTACAAATCAGATGCACCAGTTCCC...CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCTGGACACTGGGCACTaGAAACATCATAGACAGGTG | + |
Preference number: 2 (lower is better) Translates to: TEVNYKSGTHKAWKEVVFLDTGH*KHHRQV Trigger: CACCTGTCTATGATGTTTTCAGTGCCCAGTGTCCAG...GAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | CACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTAACCCTCCACCTCCTGTaGGATTCCCGTTCATTAGCA | + |
Preference number: 2 (lower is better) Translates to: HKAWKEVVFQVFTKSVWLTLHLL*DSRSLA Trigger: TGCTAATGAACGGGAATCTCACAGGAGGTGGAGGGT...TAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | TGTTTAAAAAGCCTTTATCAATTACTGGTATGTCACAGCCTATTGACAATCCCACGCATGCCTCAGAGCTaGTTCCTACCCCAGGAGCAG | + |
Preference number: 2 (lower is better) Translates to: CLKSLYQLLVCHSLLTIPRMPQS*FLPQEQ Trigger: CTGCTCCTGGGGTAGGAAGCAGCTCTGAGGCATGCG...TGGGATTGTCAATAGGCTGTGACATACCAGTAATTGATAAAGGCTTTTTAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | AGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAAGGTGAGACAGGGCTTTaGGTGTGGATTCCTTCTGGA | + |
Preference number: 2 (lower is better) Translates to: RKLFSRFSLSQFGYVRSQGETGL*VWIPSG Trigger: TCCAGAAGGAATCCACACCCAAAGCCCTGTCTCACC...TTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR CCA 90 bp | TGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTGTGAGTACATGTGTGTaGGGAGTACATGCATTTCAT | + |
Preference number: 2 (lower is better) Translates to: CISWHMCGGQRTTGEVTSVSTCV*GVHAFH Trigger: ATGAAATGCATGTACTCCCCACACACATGTACTCAC...AGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | CACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTAAACATCATAGACAGGTaGCGGGAACTGGTGCATCTG | + |
Preference number: 2 (lower is better) Translates to: HKAWKEVVFQVFTKSVWLNIIDR*RELVHL Trigger: CAGATGCACCAGTTCCCGTCACCTGTCTATGATGTT...TAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | AAAATAAGAAACTTCTCAGGAGGCAGCATCCAGGCCTATAGTGATAACCTCATTAACATCATAGACAGGTaGCGGGAACTGGTGCATCTG | + |
Preference number: 2 (lower is better) Translates to: KIRNFSGGSIQAYSDNLINIIDR*RELVHL Trigger: CAGATGCACCAGTTCCCGTCACCTGTCTATGATGTT...AATGAGGTTATCACTATAGGCCTGGATGCTGCCTCCTGAGAAGTTTCTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | AGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAACTGGACACTGGGCACTaGAAACATCATAGACAGGTG | + |
Preference number: 2 (lower is better) Translates to: RKLFSRFSLSQFGYVRSQLDTGH*KHHRQV Trigger: CACCTGTCTATGATGTTTTCAGTGCCCAGTGTCCAG...TTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | AAAATAAGAAACTTCTCAGGAGGCAGCATCCAGGCCTATAGTGATAACCTCATTCTGGACACTGGGCACTaGAAACATCATAGACAGGTG | + |
Preference number: 2 (lower is better) Translates to: KIRNFSGGSIQAYSDNLILDTGH*KHHRQV Trigger: CACCTGTCTATGATGTTTTCAGTGCCCAGTGTCCAG...AATGAGGTTATCACTATAGGCCTGGATGCTGCCTCCTGAGAAGTTTCTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR TCA 90 bp | AAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAAAGAACCCTCCACCTCCTGTaGGATTCCCGTTCATTAGCA | + |
Preference number: 2 (lower is better) Translates to: KLFSRFSLSQFGYVRSQRTLHLL*DSRSLA Trigger: TGCTAATGAACGGGAATCTCACAGGAGGTGGAGGGT...TCTTTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR-3UTR GCA 90 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCAGCAGAGTAAGGGTTTaGTTCATGAGTGGACGAGGA | + |
Preference number: 2 (lower is better) Translates to: TEVNYKSGTHKAWKEVVFSRVRV*FMSGRG Trigger: TCCTCGTCCACTCATGAAGCAAACCCTTACTCTGCT...GAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | TGTTTAAAAAGCCTTTATCAATTACTGGTATGTCACAGCCTATTGACAATCCCAGCTGGACCTATCCTGTaGCAGCCACCCTGTGCAAAC | + |
Preference number: 2 (lower is better) Translates to: CLKSLYQLLVCHSLLTIPAGPIL*QPPCAN Trigger: GTTTGCACAGGGTGGCTGGCACAGGATAGGTCCAGC...TGGGATTGTCAATAGGCTGTGACATACCAGTAATTGATAAAGGCTTTTTAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCGGAACCCACAAAGCCTaGAAGGAAGTTGTTTTCCAG | + |
Preference number: 2 (lower is better) Translates to: TEVNYKSGTHKAWKEVVFGTHKA*KEVVFQ Trigger: CTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCC...GAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CCA 90 bp | TGTTTGTGGACCCAAAACTTGTTCTTGCACACTCTACTCACTTCAGAGAGCTCAGAAGAACACTGGGTTTaGAAGTCTTCAGAGGAGACA | + |
Preference number: 2 (lower is better) Translates to: CLWTQNLFLHTLLTSESSEEHWV*KSSEET Trigger: TGTCTCCTCTGAAGACTTCCAAACCCAGTGTTCTTC...TGAGCTCTCTGAAGTGAGTAGAGTGTGCAAGAACAAGTTTTGGGTCCACAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR TCA 90 bp | TGTTTAAAAAGCCTTTATCAATTACTGGTATGTCACAGCCTATTGACAATCCCAGGACGAGGAAGACTCTaGGGTCAGCGACAAATGCAC | + |
Preference number: 2 (lower is better) Translates to: CLKSLYQLLVCHSLLTIPGRGRL*GQRQMH Trigger: GTGCATTTGTCGCTGACCTCAGAGTCTTCCTCGTCC...TGGGATTGTCAATAGGCTGTGACATACCAGTAATTGATAAAGGCTTTTTAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | ACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACTGCATGAGTGCACGCTaGCCAGAAAAACACTGGAAA | + |
Preference number: 2 (lower is better) Translates to: TKPGRKLFSRFSLSQFGYCMSAR*PEKHWK Trigger: TTTCCAGTGTTTTTCTGGTCAGCGTGCACTCATGCA...GTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | TGTTTAAAAAGCCTTTATCAATTACTGGTATGTCACAGCCTATTGACAATCCCAAAGCTTGACACCAGATaGGCAGGTAGGATCCAGGCC | + |
Preference number: 2 (lower is better) Translates to: CLKSLYQLLVCHSLLTIPKLDTR*AGRIQA Trigger: GGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTT...TGGGATTGTCAATAGGCTGTGACATACCAGTAATTGATAAAGGCTTTTTAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | AAAATAAGAAACTTCTCAGGAGGCAGCATCCAGGCCTATAGTGATAACCTCATTTTGCTAAATTCACATTaGGTGGCGGCCCTGAACTTC | + |
Preference number: 2 (lower is better) Translates to: KIRNFSGGSIQAYSDNLILLNSH*VAALNF Trigger: GAAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAA...AATGAGGTTATCACTATAGGCCTGGATGCTGCCTCCTGAGAAGTTTCTTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR-3UTR GCA 90 bp | ACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACTGTGACCACTGGCCGTaGGTATTCTACAAAGTCATC | + |
Preference number: 2 (lower is better) Translates to: TKPGRKLFSRFSLSQFGYCDHWP*VFYKVI Trigger: GATGACTTTGTAGAATACGCACGGCCAGTGGTCACA...GTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110838.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | CTTCCAAATGTATATGGCTTTCGAAGGGCTGGACACTGGGCACTGAAAACATCAGGGAACTGGTGCATCTaGTTTGTAAATCTAATTCAT | + |
Preference number: 2 (lower is better) Translates to: LPNVYGFRRAGHWALKTSGNWCI*FVNLIH Trigger: ATGAATTAGATTTACAAATCAGATGCACCAGTTCCC...TGATGTTTTCAGTGCCCAGTGTCCAGCCCTTCGAAAGCCATATACATTTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | TGTTTAAAAAGCCTTTATCAATTACTGGTATGTCACAGCCTATTGACAATCCCAAAGTCTTGGCAAGTGTaGGGTAGGGTCAGCACAGTG | + |
Preference number: 2 (lower is better) Translates to: CLKSLYQLLVCHSLLTIPKSWQV*GRVSTV Trigger: CACTGTGCTGACCCTACCTCACACTTGCCAAGACTT...TGGGATTGTCAATAGGCTGTGACATACCAGTAATTGATAAAGGCTTTTTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | TGTTTAAAAAGCCTTTATCAATTACTGGTATGTCACAGCCTATTGACAATCCCAACCCTCCACCTCCTGTaGGATTCCCGTTCATTAGCA | + |
Preference number: 2 (lower is better) Translates to: CLKSLYQLLVCHSLLTIPTLHLL*DSRSLA Trigger: TGCTAATGAACGGGAATCTCACAGGAGGTGGAGGGT...TGGGATTGTCAATAGGCTGTGACATACCAGTAATTGATAAAGGCTTTTTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | AAAATAAGAAACTTCTCAGGAGGCAGCATCCAGGCCTATAGTGATAACCTCATTAGTATCCCTTGGAATTaGTCTTTTGTGATGCTCCAG | + |
Preference number: 2 (lower is better) Translates to: KIRNFSGGSIQAYSDNLISIPWN*SFVMLQ Trigger: CTGGAGCATCACAAAAGATCAATTCCAAGGGATACT...AATGAGGTTATCACTATAGGCCTGGATGCTGCCTCCTGAGAAGTTTCTTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR CAA 90 bp | CTGCAATCATGTTTCCAAAATCTAGGAGAAGGTTCCAAGTATCCCTaGGAATTGATCTTTTGTGATGCTCCAGCAGAAATGTGTTCCAAA | + |
Preference number: 2 (lower is better) Translates to: LQSCFQNLGEGSKYP*ELIFCDAPAEMCSK Trigger: TTTGGAACACATTTCTGCTGGAGCATCACAAAAGATCAATTCCAAGGGATACTTGGAACCTTCTCCTAGATTTTGGAAACATGATTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | AAAATAAGAAACTTCTCAGGAGGCAGCATCCAGGCCTATAGTGATAACCTCATTGGGAACTGGTGCATCTaGTTTGTAAATCTAATTCAT | + |
Preference number: 2 (lower is better) Translates to: KIRNFSGGSIQAYSDNLIGNWCI*FVNLIH Trigger: ATGAATTAGATTTACAAATCAGATGCACCAGTTCCC...AATGAGGTTATCACTATAGGCCTGGATGCTGCCTCCTGAGAAGTTTCTTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR TCA 90 bp | ACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGGGAACTGGTGCATCTaGTTTGTAAATCTAATTCAT | + |
Preference number: 2 (lower is better) Translates to: TKPGRKLFSRFSLSQFGYGNWCI*FVNLIH Trigger: ATGAATTAGATTTACAAATCAGATGCACCAGTTCCC...GTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | GTGGGCCCAGCATATCTGCCCCACGGCCCTGTAGGCTaGGCAGCAAGGCACGCGTGTGACACCAAGTCTTGG | + |
Preference number: 3 (lower is better) Translates to: VGPAYLPHGPVG*AARHACDTKSW Trigger: CCAAGACTTGGTGTCACACGCGTGCCTTGCTGCCCAGCCTACAGGGCCGTGGGGCAGATATGCTGGGCCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | GGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTaGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACA | + |
Preference number: 3 (lower is better) Translates to: GQLEKSLLPSTT*LAGTELRLGST Trigger: TGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | GCTGTGTCCATGATGTGGCGGGTGGGTGACTCCTTCTaGTTTCTAGACCTGTGGCCGCGGAGCTCTCTGGAG | + |
Preference number: 3 (lower is better) Translates to: AVSMMWRVGDSF*FLDLWPRSSLE Trigger: CTCCAGAGAGCTCCGCGGCCACAGGTCTAGAAATCAGAAGGAGTCACCCACCCGCCACATCATGGACACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR GCA 72 bp | TCACCCTGGCTGGCCTTGAACTCCCAGAGACTTGCCTaGCTTGCCCTCCTGGGTGCTGGGATTAAACGTGTG | + |
Preference number: 3 (lower is better) Translates to: SPWLALNSQRLA*LALLGAGIKRV Trigger: CACACGTTTAATCCCAGCACCCAGGAGGGCAAGGCAGGCAAGTCTCTGGGAGTTCAAGGCCAGCCAGGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR CCA 72 bp | AACTCTGGTGCAGCTCCCATCCACACCTCTGTGCTGTaGCTCTCTGTAAGCAGCGGACCTGTGCAGCCTCCT | + |
Preference number: 3 (lower is better) Translates to: NSGAAPIHTSVL*LSVSSGPVQPP Trigger: AGGAGGCTGCACAGGTCCGCTGCTTACAGAGAGCCACAGCACAGAGGTGTGGATGGGAGCTGCACCAGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR TCA 72 bp | CCCATGAGTGCATGCTGGCTGGGGTCACAAATGGAGTaGGACAAGTGTTCCCCACCAGGCCACAGGATGTGC | + |
Preference number: 3 (lower is better) Translates to: PMSACWLGSQME*DKCSPPGHRMC Trigger: GCACATCCTGTGGCCTGGTGGGGAACACTTGTCTCACTCCATTTGTGACCCCAGCCAGCATGCACTCATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR TCA 72 bp | GTGGCATTCTGCTGTGTCCATGATGTGGCGGGTGGGTaGCTCCTTCTGATTTCTAGACCTGTGGCCGCGGAG | + |
Preference number: 3 (lower is better) Translates to: VAFCCVHDVAGG*LLLISRPVAAE Trigger: CTCCGCGGCCACAGGTCTAGAAATCAGAAGGAGTCACCCACCCGCCACATCATGGACACAGCAGAATGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR GCA 72 bp | CCATGTCCCCGATGTCCCGAGGCGCTTCTGTGTGTCTaGACGTCAGCCACTGCAGCCTTTAAGCAGAGTAAG | + |
Preference number: 3 (lower is better) Translates to: PCPRCPEALLCV*TSATAAFKQSK Trigger: CTTACTCTGCTTAAAGGCTGCAGTGGCTGACGTGCAGACACACAGAAGCGCCTCGGGACATCGGGGACATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR GCA 72 bp | GCTGTCCCTACAAGACAGGGTCTAGCACAGCCAGTGTaGCTGCCTCAAGGCACCACACAAAAGCCTCCTGTC | + |
Preference number: 3 (lower is better) Translates to: AVPTRQGLAQPV*LPQGTTQKPPV Trigger: GACAGGAGGCTTTTGTGTGGTGCCTTGAGGCAGGCACACTGGCTGTGCTAGACCCTGTCTTGTAGGGACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR CCA 72 bp | CCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTaGGCAGCACATGCCTTCACCTGCTCAATCATATCA | + |
Preference number: 3 (lower is better) Translates to: PPPRGSQGLNSG*AAHAFTCSIIS Trigger: TGATATGATTGAGCAGGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | CCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATGCCTTCACCCGAACAGGGTCTACGTaGCTTTCTCTAAAGACAAGT | + |
Preference number: 3 (lower is better) Translates to: PPRGSQGLNSGWAAHAFTRTGST*LSLKTS Trigger: ACTTGTCTTTAGAGAAAGCAACGTAGACCCTGTTCG...GGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | ATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGACCGAGGGGCTGGCTTaGTGGAGACTGGTTTCCAGT | + |
Preference number: 3 (lower is better) Translates to: MCGGQRTTGEVTSPLHHVTEGLA*WRLVSS Trigger: ACTGGAAACCAGTCTCCACAAAGCCAGCCCCTCGGT...CACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | AGTGATGTCATCTCACGCACCGAGGGGCTGGCTTTGTaGAGACTGGTTTCCAGTTCTGACCCTCCACCTCCT | + |
Preference number: 3 (lower is better) Translates to: SDVISRTEGLAL*RLVSSSDPPPP Trigger: AGGAGGTGGAGGGTCAGAACTGGAAACCAGTCTCCACAAAGCCAGCCCCTCGGTGCGTGAGATGACATCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | AGACAAGTGTTCCCCACCAGGCCACAGGATGTGCTGTaGGAAGCATGGCCTTCTTTCACTGTCGAGACGGTG | + |
Preference number: 3 (lower is better) Translates to: RQVFPTRPQDVL*EAWPSFTVETV Trigger: CACCGTCTCGACAGTGAAAGAAGGCCATGCTTCCCACAGCACATCCTGTGGCCTGGTGGGGAACACTTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR CAA 90 bp | CCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATGCCTTCACCCTGGATGACGTATGTTaGCTTCCAAATGTATATGGC | + |
Preference number: 3 (lower is better) Translates to: PPRGSQGLNSGWAAHAFTLDDVC*LPNVYG Trigger: GCCATATACATTTGGAAGCAAACATACGTCATCCAG...GGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | AGTGAACTGGCCGACCAGCTTGTCAACAGTTGGATATaGACCTGCTGGACCTATCCTGTGCCAGCCACCCTG | + |
Preference number: 3 (lower is better) Translates to: SELADQLVNSWI*TCWTYPVPATL Trigger: CAGGGTGGCTGGCACAGGATAGGTCCAGCAGGTTCATATCCAACTGTTGACAAGCTGGTCGGCCAGTTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | CTCTCTGTAAGCAGCGGACCTGTGCAGCCTCCTGCTTaGTGCCTGATGCTTCTGTGCTCACACTCTAACCTG | + |
Preference number: 3 (lower is better) Translates to: LSVSSGPVQPPA*CLMLLCSHSNL Trigger: CAGGTTAGAGTGTGAGCACAGAAGCATCAGGCATCAAGCAGGAGGCTGCACAGGTCCGCTGCTTACAGAGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR TCA 72 bp | GGACGCCATAGGCTCCATCCCTGGTCACACAATGAGTaGAGGAGGAACTGGGTACTGGGTTATCAGCCACTG | + |
Preference number: 3 (lower is better) Translates to: GRHRLHPWSHNE*RRNWVLGYQPL Trigger: CAGTGGCTGATAACCCAGTACCCAGTTCCTCCTTCACTCATTGTGTGACCAGGGATGGAGCCTATGGCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR GCA 72 bp | TGGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATaGCTTCACCTGCTCAATCATATCACTGCTCCTTTC | + |
Preference number: 3 (lower is better) Translates to: WLAGTELRLGST*LHLLNHITAPF Trigger: GAAAGGAGCAGTGATATGATTGAGCAGGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | CATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTaGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCG | + |
Preference number: 3 (lower is better) Translates to: HFMAHVWRSEDN*RSHFSPPPRGS Trigger: CGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | ATGGCCTTCTTTCACTGTCGAGACGGTGTGAAGGTCTaGGTAGCCCTGCTGTCACCAGGGCTGTTGTTTGTG | + |
Preference number: 3 (lower is better) Translates to: MAFFHCRDGVKV*VALLSPGLLFV Trigger: CACAAACAACAGCCCTGGTGACAGCAGGGCTACCCAGACCTTCACACCGTCTCGACAGTGAAAGAAGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR CAA 90 bp | ACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGATTCGACACAGGTGCTGCTTaGAAGCATAACTGTAACATG | + |
Preference number: 3 (lower is better) Translates to: TRHRPRRRQVRQGFGCGFDTGAA*KHNCNM Trigger: CATGTTACAGTTATGCTTCAAAGCAGCACCTGTGTC...GAATCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | GTAAGGGTTTGCTTCATGAGTGGACGAGGAAGACTCTaGGGTCAGCGACAAATGCACACAGCAACCCACGCA | + |
Preference number: 3 (lower is better) Translates to: VRVCFMSGRGRL*GQRQMHTATHA Trigger: TGCGTGGGTTGCTGTGTGCATTTGTCGCTGACCTCAGAGTCTTCCTCGTCCACTCATGAAGCAAACCCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | CAGCACATATGGGGCATGCTTTCTGTGTTTAGGCATTaGCGAGTCCCCTGTCCTGAAGTGGGCCCAGCATAT | + |
Preference number: 3 (lower is better) Translates to: QHIWGMLSVFRH*RVPCPEVGPAY Trigger: ATATGCTGGGCCCACTTCAGGACAGGGGACTCGTCAATGCCTAAACACAGAAAGCATGCCCCATATGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | GCTTTTCCATCTAGAAAGGGCTGCGTCTCCCGCCTGTaGCCACTGGCCGTGCGTATTCTACAAAGTCATCTA | + |
Preference number: 3 (lower is better) Translates to: AFPSRKGCVSRL*PLAVRILQSHL Trigger: TAGATGACTTTGTAGAATACGCACGGCCAGTGGTCACAGGCGGGAGACGCAGCCCTTTCTAGATGGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110838.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | GGAGACAGCAGGATAAGAGCTGCTGAGATTTACAGCTaGTGGACAAACTCTGGTGCAGCTCCCATCCACACC | + |
Preference number: 3 (lower is better) Translates to: GDSRIRAAEIYS*WTNSGAAPIHT Trigger: GGTGTGGATGGGAGCTGCACCAGAGTTTGTCCATCAGCTGTAAATCTCAGCAGCTCTTATCCTGCTGTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR GCA 72 bp | GGTAGGATCCAGGCCCTCTATGCCTGTGTGCATGAGTaGACGCTGACCAGAAAAACACTGGAAAAGCAGATG | + |
Preference number: 3 (lower is better) Translates to: GRIQALYACVHE*TLTRKTLEKQM Trigger: CATCTGCTTTTCCAGTGTTTTTCTGGTCAGCGTGCACTCATGCACACAGGCATAGAGGGCCTGGATCCTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | CATCTAGAAAGGGCTGCGTCTCCCGCCTGTGACCACTaGCCGTGCGTATTCTACAAAGTCATCTATAAGGAC | + |
Preference number: 3 (lower is better) Translates to: HLERAASPACDH*PCVFYKVIYKD Trigger: GTCCTTATAGATGACTTTGTAGAATACGCACGGCCAGTGGTCACAGGCGGGAGACGCAGCCCTTTCTAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110838.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | AGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGCTGGATGACGTATGTTaGCTTCCAAATGTATATGGC | + |
Preference number: 3 (lower is better) Translates to: RSEDNWRSHFSPPPRGSQLDDVC*LPNVYG Trigger: GCCATATACATTTGGAAGCAAACATACGTCATCCAG...CTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | AGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGAAGCCTGGAAGGAAGTaGTTTTCCAGGTTTTCACTA | + |
Preference number: 3 (lower is better) Translates to: RSEDNWRSHFSPPPRGSQKPGRK*FSRFSL Trigger: TAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTT...CTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | CAGTTTGAGAAGTACCCAGCTGACATCGATCTGACTGCCCTGCTCTGTCCTCTGCACCAGGGCTGTTGTTaGTGGACCCAAAACTTGTTC | + |
Preference number: 3 (lower is better) Translates to: QFEKYPADIDLTALLCPLHQGCC*WTQNLF Trigger: GAACAAGTTTTGGGTCCACAAACAACAGCCCTGGTG...CAGAGGACAGAGCAGGGCAGTCAGATCGATGTCAGCTGGGTACTTCTCAAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR GCA 72 bp | TCAACAGTTGGATATGAACCTGCTGGACCTATCCTGTaGCAGCCACCCTGTGCAAACTGCAACAGTCTCTTC | + |
Preference number: 3 (lower is better) Translates to: STVGYEPAGPIL*QPPCANCNSLF Trigger: GAAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGCACAGGATAGGTCCAGCAGGTTCATATCCAACTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR GCA 72 bp | AGTGAAATGCCCAAAGCTACCAGTCTTGCCCATGAGTaGATGCTGGCTGGGGTCACAAATGGAGTGAGACAA | + |
Preference number: 3 (lower is better) Translates to: SEMPKATSLAHE*MLAGVTNGVRQ Trigger: TTGTCTCACTCCATTTGTGACCCCAGCCAGCATGCACTCATGGGCAAGACTGGTAGCTTTGGGCATTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR CCA 72 bp | GTGTGTGGGGAGTACATGCATTTCATGGCACATGTGTaGAGGTCAGAGGACAACTGGAGAAGTCACTTCTCC | + |
Preference number: 3 (lower is better) Translates to: VCGEYMHFMAHV*RSEDNWRSHFS Trigger: GGAGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | GGTGAAGGTAAACTGGTAAAGGTCCTTGAACTTGGCTaGGTCCTTAAGCTCTTGCTCCAGTCTGGGGAGAAG | + |
Preference number: 3 (lower is better) Translates to: GEGKLVKVLELG*VLKLLLQSGEK Trigger: CTTCTCCCCAGACTGGAGCAAGAGCTTAAGGACCCAGCCAAGTTCAAGGACCTTTACCAGTTTACCTTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | TTAAAAGCAGTGGGCTCTCGGGCAAGGCCACCTTCCTaGGGCGTGTGTTTAACAGCTTGGACTTGTGTAAAA | + |
Preference number: 3 (lower is better) Translates to: LKAVGSRARPPS*GVCLTAWTCVK Trigger: TTTTACACAAGTCCAAGCTGTTAAACACACGCCTCAGGAAGGTGGCCTTGCCCGAGAGCCCACTGCTTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | ATGTATATGGCTTTCGAAGGGCTGGACACTGGGCACTaGAAACATCATAGACAGGTGACGGGAACTGGTGCA | + |
Preference number: 3 (lower is better) Translates to: MYMAFEGLDTGH*KHHRQVTGTGA Trigger: TGCACCAGTTCCCGTCACCTGTCTATGATGTTTTCAGTGCCCAGTGTCCAGCCCTTCGAAAGCCATATACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | GGAAGTCTTCAGAGGAGACAGCAGGATAAGAGCTGCTaGGATTTACAGCTGATGGACAAACTCTGGTGCAGC | + |
Preference number: 3 (lower is better) Translates to: GSLQRRQQDKSC*DLQLMDKLWCS Trigger: GCTGCACCAGAGTTTGTCCATCAGCTGTAAATCTCAGCAGCTCTTATCCTGCTGTCTCCTCTGAAGACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR TCA 72 bp | ACATTCAGTTTGAGAAGTACCCAGCTGACATCGATCTaGCTGCCCTGCTCTGTCCTCTGTCCTCTTAGGCAA | + |
Preference number: 3 (lower is better) Translates to: TFSLRSTQLTSI*LPCSVLCPLRQ Trigger: TTGCCTAAGAGGACAGAGGACAGAGCAGGGCAGTCAGATCGATGTCAGCTGGGTACTTCTCAAACTGAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR-3UTR CAA 90 bp | TGTGGGGAGTACATGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGGACACAGGTGCTGCTTaGAAGCATAACTGTAACATG | + |
Preference number: 3 (lower is better) Translates to: CGEYMHFMAHVWRSEDNWDTGAA*KHNCNM Trigger: CATGTTACAGTTATGCTTCAAAGCAGCACCTGTGTC...CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | AGGCAGGAAGATCCCACGTTCAAGACCTACGTAAGCTaGGCAAGTCAAACAAAAAGTGAGCTGGGCTGTAGT | + |
Preference number: 3 (lower is better) Translates to: RQEDPTFKTYVS*ASQTKSELGCS Trigger: ACTACAGCCCAGCTCACTTTTTGTTTGACTTGCTCAGCTTACGTAGGTCTTGAACGTGGGATCTTCCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR CCA 72 bp | GCTGCTTTGAAGCATAACTGTAACATGATTCCAGTTTaGAAACGGCTGGTGCTCACCGTAACGTCAGGAGCT | + |
Preference number: 3 (lower is better) Translates to: AALKHNCNMIPV*KRLVLTVTSGA Trigger: AGCTCCTGACGTTACGGTGAGCACCAGCCGTTTCCAAACTGGAATCATGTTACAGTTATGCTTCAAAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | TGTGAGTACATGTGTGTGGGGAGTACATGCATTTCATaGCACATGTGTGGAGGTCAGAGGACAACTGGAGAA | + |
Preference number: 3 (lower is better) Translates to: CEYMCVGSTCIS*HMCGGQRTTGE Trigger: TTCTCCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACACACATGTACTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | TACAGCACATATGGGGCATGCTTTCTGTGTTTAGGCATTGACGAGTCCCCTGTCCGAACAGGGTCTACGTaGCTTTCTCTAAAGACAAGT | + |
Preference number: 3 (lower is better) Translates to: YSTYGACFLCLGIDESPVRTGST*LSLKTS Trigger: ACTTGTCTTTAGAGAAAGCAACGTAGACCCTGTTCG...GACAGGGGACTCGTCAATGCCTAAACACAGAAAGCATGCCCCATATGTGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | TGTGGGGAGTACATGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGCTGGATGACGTATGTTaGCTTCCAAATGTATATGGC | + |
Preference number: 3 (lower is better) Translates to: CGEYMHFMAHVWRSEDNWLDDVC*LPNVYG Trigger: GCCATATACATTTGGAAGCAAACATACGTCATCCAG...CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | TGCTTTCTGTGTTTAGGCATTGACGAGTCCCCTGTCCTGAAGTGGGCCCAGCATAAGTATCCCTTGGAATaGATCTTTTGTGATGCTCCA | + |
Preference number: 3 (lower is better) Translates to: CFLCLGIDESPVLKWAQHKYPLE*IFCDAP Trigger: TGGAGCATCACAAAAGATCAATTCCAAGGGATACTT...ATGCTGGGCCCACTTCAGGACAGGGGACTCGTCAATGCCTAAACACAGAAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | TGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTGACACAGGTGCTGCTTaGAAGCATAACTGTAACATG | + |
Preference number: 3 (lower is better) Translates to: CISWHMCGGQRTTGEVTSDTGAA*KHNCNM Trigger: CATGTTACAGTTATGCTTCAAAGCAGCACCTGTGTC...AGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | AAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAAAGAACCGAGGGGCTGGCTTaGTGGAGACTGGTTTCCAGT | + |
Preference number: 3 (lower is better) Translates to: KLFSRFSLSQFGYVRSQRTEGLA*WRLVSS Trigger: ACTGGAAACCAGTCTCCACAAAGCCAGCCCCTCGGT...TCTTTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | AGGAACTGGGTACTGGGTTATCAGCCACTGAATGTCCCAGAAGTAACATGGCACACCCAAAACTTGTTCTaGCACACTCTACTCACTTCA | + |
Preference number: 3 (lower is better) Translates to: RNWVLGYQPLNVPEVTWHTQNLF*HTLLTS Trigger: TGAAGTGAGTAGAGTGTGCAAGAACAAGTTTTGGGT...GTGCCATGTTACTTCTGGGACATTCAGTGGCTGATAACCCAGTACCCAGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR GCA 72 bp | ATTCTATCACTAGATCAAACAGAGAGGGGAGTGAAATaGCCAAAGCTACCAGTCTTGCCCATGAGTGCATGC | + |
Preference number: 3 (lower is better) Translates to: ILSLDQTERGVK*PKLPVLPMSAC Trigger: GCATGCACTCATGGGCAAGACTGGTAGCTTTGGGCATTTCACTCCCCTCTCTGTTTGATCTAGTGATAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR TCA 72 bp | GGCTGGACACTGGGCACTGAAAACATCATAGACAGGTaGCGGGAACTGGTGCATCTGATTTGTAAATCTAAT | + |
Preference number: 3 (lower is better) Translates to: GWTLGTENIIDR*RELVHLICKSN Trigger: ATTAGATTTACAAATCAGATGCACCAGTTCCCGTCACCTGTCTATGATGTTTTCAGTGCCCAGTGTCCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | TCCAGGCCTATAGTGATAACCTCATTAGAAGTGAACTaGCCGACCAGCTTGTCAACAGTTGGATATGAACCT | + |
Preference number: 3 (lower is better) Translates to: SRPIVITSLEVN*PTSLSTVGYEP Trigger: AGGTTCATATCCAACTGTTGACAAGCTGGTCGGCCAGTTCACTTCTAATGAGGTTATCACTATAGGCCTGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | GAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCAGCGAACAGGGTCTACGTaGCTTTCTCTAAAGACAAGT | + |
Preference number: 3 (lower is better) Translates to: EVNYKSGTHKAWKEVVFQRTGST*LSLKTS Trigger: ACTTGTCTTTAGAGAAAGCAACGTAGACCCTGTTCG...CTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | AAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTaGTTACGTACGCTCTCAAAGATGTCCCGGTTGTCC | + |
Preference number: 3 (lower is better) Translates to: KEVVFQVFTKSV*LRTLSKMSRLS Trigger: GGACAACCGGGACATCTTTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCGACACAGGTGCTGCTTaGAAGCATAACTGTAACATG | + |
Preference number: 3 (lower is better) Translates to: TEVNYKSGTHKAWKEVVFDTGAA*KHNCNM Trigger: CATGTTACAGTTATGCTTCAAAGCAGCACCTGTGTC...GAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | CTTCCAAATGTATATGGCTTTCGAAGGGCTGGACACTGGGCACTGAAAACATCAGGTTCCAAGTATCCCTaGGAATTGATCTTTTGTGAT | + |
Preference number: 3 (lower is better) Translates to: LPNVYGFRRAGHWALKTSGSKYP*ELIFCD Trigger: ATCACAAAAGATCAATTCCAAGGGATACTTGGAACC...TGATGTTTTCAGTGCCCAGTGTCCAGCCCTTCGAAAGCCATATACATTTGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCTGGATGACGTATGTTaGCTTCCAAATGTATATGGC | + |
Preference number: 3 (lower is better) Translates to: TEVNYKSGTHKAWKEVVFLDDVC*LPNVYG Trigger: GCCATATACATTTGGAAGCAAACATACGTCATCCAG...GAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR CCA 72 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTaGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCA | + |
Preference number: 3 (lower is better) Translates to: TEVNYKSGTHKA*KEVVFQVFTKS Trigger: TGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | AAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAAAGACGAACAGGGTCTACGTaGCTTTCTCTAAAGACAAGT | + |
Preference number: 3 (lower is better) Translates to: KLFSRFSLSQFGYVRSQRRTGST*LSLKTS Trigger: ACTTGTCTTTAGAGAAAGCAACGTAGACCCTGTTCG...TCTTTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | AAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAAAGATTTGCTAAATTCACATaGAGTGGCGGCCCTGAACTT | + |
Preference number: 3 (lower is better) Translates to: KLFSRFSLSQFGYVRSQRFAKFT*SGGPEL Trigger: AAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAAA...TCTTTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | TGTTTAAAAAGCCTTTATCAATTACTGGTATGTCACAGCCTATTGACAATCCCACGAACAGGGTCTACGTaGCTTTCTCTAAAGACAAGT | + |
Preference number: 3 (lower is better) Translates to: CLKSLYQLLVCHSLLTIPRTGST*LSLKTS Trigger: ACTTGTCTTTAGAGAAAGCAACGTAGACCCTGTTCG...TGGGATTGTCAATAGGCTGTGACATACCAGTAATTGATAAAGGCTTTTTAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR-3UTR CAA 90 bp | TGTTTAAAAAGCCTTTATCAATTACTGGTATGTCACAGCCTATTGACAATCCCAGACACAGGTGCTGCTTaGAAGCATAACTGTAACATG | + |
Preference number: 3 (lower is better) Translates to: CLKSLYQLLVCHSLLTIPDTGAA*KHNCNM Trigger: CATGTTACAGTTATGCTTCAAAGCAGCACCTGTGTC...TGGGATTGTCAATAGGCTGTGACATACCAGTAATTGATAAAGGCTTTTTAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
3UTR TCA 72 bp | AAATCTAGAGATTTGATAATTCAAAACTATCCATCTTaGATACCAAGATTAAAAGCAGTGGGCTCTCGGGCA | + |
Preference number: 3 (lower is better) Translates to: KSRDLIIQNYPS*IPRLKAVGSRA Trigger: TGCCCGAGAGCCCACTGCTTTTAATCTTGGTATTCAAGATGGATAGTTTTGAATTATCAAATCTCTAGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR TCA 90 bp | GTGACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGACCTGAGTGCATGCCATaGACTGGCGGACCTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: VTRHRPRRRQVRQGFGCGPECMP*TGGPCP Trigger: AGGACAAGGTCCGCCAGTTCATGGCATGCACTCAGG...TCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR GCA 90 bp | GGTGACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGGCTCCTAAGCCCTTCTaGCCAGGGTTCTTAGCGAAG | + |
Preference number: 4 (lower is better) Translates to: GDTAQTQAQTGETGLWVWAPKPF*PGFLAK Trigger: CTTCGCTAAGAACCCTGGGCAGAAGGGCTTAGGAGC...CCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110838.8 ENSMUST00000110840.8 |
||
CDS-3UTR TCA 90 bp | ACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGATTCCCTGAGTGCATGCCATaGACTGGCGGACCTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: TRHRPRRRQVRQGFGCGFPECMP*TGGPCP Trigger: AGGACAAGGTCCGCCAGTTCATGGCATGCACTCAGG...GAATCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR CCA 90 bp | CCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATGCCTTCACCAACGCCTCGGGGTTTTaGAAGAAACTGTCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: PPRGSQGLNSGWAAHAFTNASGF*KKLSVA Trigger: GGCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTT...GGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR GCA 90 bp | ATGCAGGCGGCTTCTAAAGCACTAGGTCTGCCCATGTCCCCGATGTCCCGAGGCGCTAGCCTGAGTGCATaGCATGAACTGGCGGACCTT | + |
Preference number: 4 (lower is better) Translates to: MQAASKALGLPMSPMSRGASLSA*HELADL Trigger: AAGGTCCGCCAGTTCATGGCATGCACTCAGGCTAGC...GCCTCGGGACATCGGGGACATGGGCAGACCTAGTGCTTTAGAAGCCGCCTGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR GCA 90 bp | AGCACTAGGTCTGCCCATGTCCCCGATGTCCCGAGGCGCTTCTGTGTGTCTGCAGCTAGCCTGAGTGCATaGCATGAACTGGCGGACCTT | + |
Preference number: 4 (lower is better) Translates to: STRSAHVPDVPRRFCVSAASLSA*HELADL Trigger: AAGGTCCGCCAGTTCATGGCATGCACTCAGGCTAGC...TGCAGACACACAGAAGCGCCTCGGGACATCGGGGACATGGGCAGACCTAGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR GCA 90 bp | GGTGACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGTACCTGCTGTACAGTTaGTCCAGCTTCTTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: GDTAQTQAQTGETGLWVWYLLYS*SSFFWS Trigger: GGACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTA...CCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGTCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR GCA 90 bp | CCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATGCCTTCACCGTGGGTCTTTGTACCTaGTGTACAGTTGCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: PPRGSQGLNSGWAAHAFTVGLCT*CTVAPA Trigger: AGCTGGAGCAACTGTACAGCAGGTACAAAGACCCAC...GGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR GCA 90 bp | AGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGCTAGCCTGAGTGCATaGCATGAACTGGCGGACCTT | + |
Preference number: 4 (lower is better) Translates to: RSEDNWRSHFSPPPRGSQASLSA*HELADL Trigger: AAGGTCCGCCAGTTCATGGCATGCACTCAGGCTAGC...CTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR GCA 90 bp | AATGTCCACCTCGTAGGGCACGCATGCCTCAGAGCTGCTTCCTACCCCAGGAGCGGGTCCTTAAGCTCTTaGTCCAGTCTGGGGAGAAGA | + |
Preference number: 4 (lower is better) Translates to: NVHLVGHACLRAASYPRSGSLSS*SSLGRR Trigger: TCTTCTCCCCAGACTGGAGCAAGAGCTTAAGGACCC...GCTCCTGGGGTAGGAAGCAGCTCTGAGGCATGCGTGCCCTACGAGGTGGACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR GCA 90 bp | GAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGGGTCCTTAAGCTCTTaGTCCAGTCTGGGGAGAAGA | + |
Preference number: 4 (lower is better) Translates to: EKSLLPSTTWLAGTELRLGSLSS*SSLGRR Trigger: TCTTCTCCCCAGACTGGAGCAAGAGCTTAAGGACCC...CAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR GCA 90 bp | ATGCAGGCGGCTTCTAAAGCACTAGGTCTGCCCATGTCCCCGATGTCCCGAGGCGGGTCCTTAAGCTCTTaGTCCAGTCTGGGGAGAAGA | + |
Preference number: 4 (lower is better) Translates to: MQAASKALGLPMSPMSRGGSLSS*SSLGRR Trigger: TCTTCTCCCCAGACTGGAGCAAGAGCTTAAGGACCC...GCCTCGGGACATCGGGGACATGGGCAGACCTAGTGCTTTAGAAGCCGCCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR GCA 90 bp | CCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGGGCAGCACATGCCTTCACCTGTGACCACTGGCCGTaGGTATTCTACAAAGTCATC | + |
Preference number: 4 (lower is better) Translates to: PPRGSQGLNSGWAAHAFTCDHWP*VFYKVI Trigger: GATGACTTTGTAGAATACGCACGGCCAGTGGTCACA...GGTGAAGGCATGTGCTGCCCAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045366.10 ENSMUST00000110840.8 |
||
CDS-3UTR CCA 90 bp | AATGTCCACCTCGTAGGGCACGCATGCCTCAGAGCTGCTTCCTACCCCAGGAGCAACGCCTCGGGGTTTTaGAAGAAACTGTCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: NVHLVGHACLRAASYPRSNASGF*KKLSVA Trigger: GGCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTT...GCTCCTGGGGTAGGAAGCAGCTCTGAGGCATGCGTGCCCTACGAGGTGGACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR CCA 90 bp | GGTGACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGTGCTCCAGCTTCTTCTaGTCCACACTGCTCTTCATA | + |
Preference number: 4 (lower is better) Translates to: GDTAQTQAQTGETGLWVWCSSFF*STLLFI Trigger: TATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCA...CCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR CCA 90 bp | TGGAAACGGCTGGTGCTCACCGTAACGTCAGGAGCTGGACAGCAAGCTCTCAGCCCCGCCTGTGACCACTaGCCGTGCGTATTCTACAAA | + |
Preference number: 4 (lower is better) Translates to: WKRLVLTVTSGAGQQALSPACDH*PCVFYK Trigger: TTTGTAGAATACGCACGGCCAGTGGTCACAGGCGGG...GCTGAGAGCTTGCTGTCCAGCTCCTGACGTTACGGTGAGCACCAGCCGTTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045366.10 ENSMUST00000110840.8 |
||
3UTR CAA 72 bp | TTGAGACAGAGGCTCACTATGTCACCCTGGCTGGCCTaGAACTCCCAGAGACTTGCCTGCCTTGCCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: LRQRLTMSPWLA*NSQRLACLALL Trigger: CAGGAGGGCAAGGCAGGCAAGTCTCTGGGAGTTCAAGGCCAGCCAGGGTGACATAGTGAGCCTCTGTCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR GCA 90 bp | ACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGATTCGTGGGTCTTTGTACCTaGTGTACAGTTGCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: TRHRPRRRQVRQGFGCGFVGLCT*CTVAPA Trigger: AGCTGGAGCAACTGTACAGCAGGTACAAAGACCCAC...GAATCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR GCA 90 bp | CTCTGTGCTGTGGCTCTCTGTAAGCAGCGGACCTGTGCAGCCTCCTGCTTGATGGGGTCCTTAAGCTCTTaGTCCAGTCTGGGGAGAAGA | + |
Preference number: 4 (lower is better) Translates to: LCAVALCKQRTCAASCLMGSLSS*SSLGRR Trigger: TCTTCTCCCCAGACTGGAGCAAGAGCTTAAGGACCC...CATCAAGCAGGAGGCTGCACAGGTCCGCTGCTTACAGAGAGCCACAGCACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR TCA 90 bp | ACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGATTCCTTTGCTAAATTCACATTaGGTGGCGGCCCTGAACTTC | + |
Preference number: 4 (lower is better) Translates to: TAQTQAQTGETGLWVWIPLLNSH*VAALNF Trigger: GAAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAA...AGGAATCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR TCA 90 bp | AATGTCCACCTCGTAGGGCACGCATGCCTCAGAGCTGCTTCCTACCCCAGGAGCTTGCTAAATTCACATTaGGTGGCGGCCCTGAACTTC | + |
Preference number: 4 (lower is better) Translates to: NVHLVGHACLRAASYPRSLLNSH*VAALNF Trigger: GAAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAA...GCTCCTGGGGTAGGAAGCAGCTCTGAGGCATGCGTGCCCTACGAGGTGGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR GCA 90 bp | CCCAAAGCTACCAGTCTTGCCCATGAGTGCATGCTGGCTGGGGTCACAAATGGAGCTAGCCTGAGTGCATaGCATGAACTGGCGGACCTT | + |
Preference number: 4 (lower is better) Translates to: PKATSLAHECMLAGVTNGASLSA*HELADL Trigger: AAGGTCCGCCAGTTCATGGCATGCACTCAGGCTAGC...TCCATTTGTGACCCCAGCCAGCATGCACTCATGGGCAAGACTGGTAGCTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR GCA 90 bp | ACCAAGATTAAAAGCAGTGGGCTCTCGGGCAAGGCCACCTTCCTGAGGCGTGTGGGGTCCTTAAGCTCTTaGTCCAGTCTGGGGAGAAGA | + |
Preference number: 4 (lower is better) Translates to: TKIKSSGLSGKATFLRRVGSLSS*SSLGRR Trigger: TCTTCTCCCCAGACTGGAGCAAGAGCTTAAGGACCC...CACACGCCTCAGGAAGGTGGCCTTGCCCGAGAGCCCACTGCTTTTAATCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR CCA 90 bp | ACCAAGATTAAAAGCAGTGGGCTCTCGGGCAAGGCCACCTTCCTGAGGCGTGTGAACGCCTCGGGGTTTTaGAAGAAACTGTCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: TKIKSSGLSGKATFLRRVNASGF*KKLSVA Trigger: GGCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTT...CACACGCCTCAGGAAGGTGGCCTTGCCCGAGAGCCCACTGCTTTTAATCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR CCA 90 bp | AGCACTAGGTCTGCCCATGTCCCCGATGTCCCGAGGCGCTTCTGTGTGTCTGCATGCTCCAGCTTCTTCTaGTCCACACTGCTCTTCATA | + |
Preference number: 4 (lower is better) Translates to: STRSAHVPDVPRRFCVSACSSFF*STLLFI Trigger: TATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCA...TGCAGACACACAGAAGCGCCTCGGGACATCGGGGACATGGGCAGACCTAGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR CCA 90 bp | GTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGCCCTCTATGCCTGTGGCTCTTGCTCCAGTCTaGGGAGAAGAGCTTTCAGCC | + |
Preference number: 4 (lower is better) Translates to: VRSLTPDEQVGSRPSMPVALAPV*GEELSA Trigger: GGCTGAAAGCTCTTCTCCCCAGACTGGAGCAAGAGC...CACAGGCATAGAGGGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR TCA 90 bp | ATGCAGGCGGCTTCTAAAGCACTAGGTCTGCCCATGTCCCCGATGTCCCGAGGCCGGACCTTGTCCTTCTaGGCTGATTTAAGTTTATGC | + |
Preference number: 4 (lower is better) Translates to: MQAASKALGLPMSPMSRGRTLSF*ADLSLC Trigger: GCATAAACTTAAATCAGCTCAGAAGGACAAGGTCCG...GCCTCGGGACATCGGGGACATGGGCAGACCTAGTGCTTTAGAAGCCGCCTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR TCA 90 bp | AGAGTCCGGAACGTGCTACAAGTGTGGTTCTGGCATGAAGAACACTGGGTTTGGCCTGAGTGCATGCCATaGACTGGCGGACCTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: RVRNVLQVWFWHEEHWVWPECMP*TGGPCP Trigger: AGGACAAGGTCCGCCAGTTCATGGCATGCACTCAGG...CCAAACCCAGTGTTCTTCATGCCAGAACCACACTTGTAGCACGTTCCGGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR TCA 90 bp | GGTGACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGAGTATCCCTTGGAATTaGTCTTTTGTGATGCTCCTA | + |
Preference number: 4 (lower is better) Translates to: GDTAQTQAQTGETGLWVWSIPWN*SFVMLL Trigger: TAGGAGCATCACAAAAGATCAATTCCAAGGGATACT...CCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110838.8 |
||
CDS-3UTR CCA 90 bp | ACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGATTCGGAAGAAACTGTCTGTaGCCTCATCTAGTTTCCACT | + |
Preference number: 4 (lower is better) Translates to: TRHRPRRRQVRQGFGCGFGRNCL*PHLVST Trigger: AGTGGAAACTAGATGAGGCCACAGACAGTTTCTTCC...GAATCCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR CCA 90 bp | CTCTGTGCTGTGGCTCTCTGTAAGCAGCGGACCTGTGCAGCCTCCTGCTTGATGTGCTCCAGCTTCTTCTaGTCCACACTGCTCTTCATA | + |
Preference number: 4 (lower is better) Translates to: LCAVALCKQRTCAASCLMCSSFF*STLLFI Trigger: TATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCA...CATCAAGCAGGAGGCTGCACAGGTCCGCTGCTTACAGAGAGCCACAGCACAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR CAA 72 bp | GACAGCAAGCTCTCAGCCCTGCGAACAGGGTCTACGTaGCTTTCTCTAAAGACAAGTCATGCAGGCGGCTTC | + |
Preference number: 4 (lower is better) Translates to: DSKLSALRTGST*LSLKTSHAGGF Trigger: GAAGCCGCCTGCATGACTTGTCTTTAGAGAAAGCAACGTAGACCCTGTTCGCAGGGCTGAGAGCTTGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR CAA 72 bp | ACAGAGAGGGGAGTGAAATGCCCAAAGCTACCAGTCTaGCCCATGAGTGCATGCTGGCTGGGGTCACAAATG | + |
Preference number: 4 (lower is better) Translates to: TERGVKCPKLPV*PMSACWLGSQM Trigger: CATTTGTGACCCCAGCCAGCATGCACTCATGGGCAAGACTGGTAGCTTTGGGCATTTCACTCCCCTCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR TCA 90 bp | GCTCTCTGTAAGCAGCGGACCTGTGCAGCCTCCTGCTTGATGCCTGATGCTTCTTTGCTAAATTCACATTaGGTGGCGGCCCTGAACTTC | + |
Preference number: 4 (lower is better) Translates to: ALCKQRTCAASCLMPDASLLNSH*VAALNF Trigger: GAAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAA...AGAAGCATCAGGCATCAAGCAGGAGGCTGCACAGGTCCGCTGCTTACAGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR GCA 90 bp | GTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGCCCTCTATGCCTGTGGTGGGTCTTTGTACCTaGTGTACAGTTGCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: VRSLTPDEQVGSRPSMPVVGLCT*CTVAPA Trigger: AGCTGGAGCAACTGTACAGCAGGTACAAAGACCCAC...CACAGGCATAGAGGGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR CCA 90 bp | AGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGAAGAAACTGTCTGTaGCCTCATCTAGTTTCCACT | + |
Preference number: 4 (lower is better) Translates to: RSEDNWRSHFSPPPRGSQGRNCL*PHLVST Trigger: AGTGGAAACTAGATGAGGCCACAGACAGTTTCTTCC...CTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR CCA 90 bp | AGAGTCCGGAACGTGCTACAAGTGTGGTTCTGGCATGAAGAACACTGGGTTTGGGCTCTTGCTCCAGTCTaGGGAGAAGAGCTTTCAGCC | + |
Preference number: 4 (lower is better) Translates to: RVRNVLQVWFWHEEHWVWALAPV*GEELSA Trigger: GGCTGAAAGCTCTTCTCCCCAGACTGGAGCAAGAGC...CCAAACCCAGTGTTCTTCATGCCAGAACCACACTTGTAGCACGTTCCGGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
3UTR CAA 72 bp | GTGAAGGTCTGGGTAGCCCTGCTGTCACCAGGGCTGTaGTTTGTGGACCCAAAACTTGTTCTTGCACACTCT | + |
Preference number: 4 (lower is better) Translates to: VKVWVALLSPGL*FVDPKLVLAHS Trigger: AGAGTGTGCAAGAACAAGTTTTGGGTCCACAAACAACAGCCCTGGTGACAGCAGGGCTACCCAGACCTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR TCA 90 bp | TGTGCCAGCCACCCTGTGCAAACTGCAACAGTCTCTTCTAGAGAAAATGAAAGCCCTGAGTGCATGCCATaGACTGGCGGACCTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: CASHPVQTATVSSRENESPECMP*TGGPCP Trigger: AGGACAAGGTCCGCCAGTTCATGGCATGCACTCAGG...GCTTTCATTTTCTCTAGAAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR GCA 90 bp | CCCAAAGCTACCAGTCTTGCCCATGAGTGCATGCTGGCTGGGGTCACAAATGGAAAATCTAAGCCCTTCTaGCCAGGGTTCTTAGCGAAG | + |
Preference number: 4 (lower is better) Translates to: PKATSLAHECMLAGVTNGKSKPF*PGFLAK Trigger: CTTCGCTAAGAACCCTGGGCAGAAGGGCTTAGATTT...TCCATTTGTGACCCCAGCCAGCATGCACTCATGGGCAAGACTGGTAGCTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR CCA 90 bp | GTCTGCACGTCAGCCACTGCAGCCTTTAAGCAGAGTAAGGGTTTGCTTCATGAGAACGCCTCGGGGTTTTaGAAGAAACTGTCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: VCTSATAAFKQSKGLLHENASGF*KKLSVA Trigger: GGCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTT...CTCATGAAGCAAACCCTTACTCTGCTTAAAGGCTGCAGTGGCTGACGTGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR CCA 90 bp | GTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGCCCTCTATGCCTGTGTGCTCCAGCTTCTTCTaGTCCACACTGCTCTTCATA | + |
Preference number: 4 (lower is better) Translates to: VRSLTPDEQVGSRPSMPVCSSFF*STLLFI Trigger: TATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCA...CACAGGCATAGAGGGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR TCA 90 bp | ACCAAGATTAAAAGCAGTGGGCTCTCGGGCAAGGCCACCTTCCTGAGGCGTGTGAGTATCCCTTGGAATTaGTCTTTTGTGATGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: TKIKSSGLSGKATFLRRVSIPWN*SFVMLQ Trigger: CTGGAGCATCACAAAAGATCAATTCCAAGGGATACT...CACACGCCTCAGGAAGGTGGCCTTGCCCGAGAGCCCACTGCTTTTAATCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045366.10 |
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CDS-3UTR GCA 90 bp | TGTGGGGAGTACATGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGTACCTGCTGTACAGTTaGTCCAGCTTCTTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: CGEYMHFMAHVWRSEDNWYLLYS*SSFFWS Trigger: GGACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTA...CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR GCA 90 bp | TGCTTTCTGTGTTTAGGCATTGACGAGTCCCCTGTCCTGAAGTGGGCCCAGCATAAATCTAAGCCCTTCTaGCCAGGGTTCTTAGCGAAG | + |
Preference number: 4 (lower is better) Translates to: CFLCLGIDESPVLKWAQHKSKPF*PGFLAK Trigger: CTTCGCTAAGAACCCTGGGCAGAAGGGCTTAGATTT...ATGCTGGGCCCACTTCAGGACAGGGGACTCGTCAATGCCTAAACACAGAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045366.10 ENSMUST00000110839.10 |
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CDS-3UTR CCA 90 bp | TGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTGCTCTTGCTCCAGTCTaGGGAGAAGAGCTTTCAGCC | + |
Preference number: 4 (lower is better) Translates to: CISWHMCGGQRTTGEVTSALAPV*GEELSA Trigger: GGCTGAAAGCTCTTCTCCCCAGACTGGAGCAAGAGC...AGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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3UTR CAA 72 bp | ACGTCAGCCACTGCAGCCTTTAAGCAGAGTAAGGGTTaGCTTCATGAGTGGACGAGGAAGACTCTGAGGTCA | + |
Preference number: 4 (lower is better) Translates to: TSATAAFKQSKG*LHEWTRKTLRS Trigger: TGACCTCAGAGTCTTCCTCGTCCACTCATGAAGCAAACCCTTACTCTGCTTAAAGGCTGCAGTGGCTGACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR TCA 90 bp | TGCTTTCTGTGTTTAGGCATTGACGAGTCCCCTGTCCTGAAGTGGGCCCAGCATCGGACCTTGTCCTTCTaGGCTGATTTAAGTTTATGC | + |
Preference number: 4 (lower is better) Translates to: CFLCLGIDESPVLKWAQHRTLSF*ADLSLC Trigger: GCATAAACTTAAATCAGCTCAGAAGGACAAGGTCCG...ATGCTGGGCCCACTTCAGGACAGGGGACTCGTCAATGCCTAAACACAGAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR TCA 90 bp | GGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTCCTGAGTGCATGCCATaGACTGGCGGACCTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: GTHKAWKEVVFQVFTKSVPECMP*TGGPCP Trigger: AGGACAAGGTCCGCCAGTTCATGGCATGCACTCAGG...AACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR GCA 90 bp | TACAGCACATATGGGGCATGCTTTCTGTGTTTAGGCATTGACGAGTCCCCTGTCTACCTGCTGTACAGTTaGTCCAGCTTCTTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: YSTYGACFLCLGIDESPVYLLYS*SSFFWS Trigger: GGACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTA...GACAGGGGACTCGTCAATGCCTAAACACAGAAAGCATGCCCCATATGTGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR GCA 90 bp | GTCTGCACGTCAGCCACTGCAGCCTTTAAGCAGAGTAAGGGTTTGCTTCATGAGTGTGACCACTGGCCGTaGGTATTCTACAAAGTCATC | + |
Preference number: 4 (lower is better) Translates to: VCTSATAAFKQSKGLLHECDHWP*VFYKVI Trigger: GATGACTTTGTAGAATACGCACGGCCAGTGGTCACA...CTCATGAAGCAAACCCTTACTCTGCTTAAAGGCTGCAGTGGCTGACGTGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045366.10 ENSMUST00000110840.8 |
||
CDS-3UTR CCA 90 bp | GGTCAGCACAGTGATGTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGGGAAGAAACTGTCTGTaGCCTCATCTAGTTTCCACT | + |
Preference number: 4 (lower is better) Translates to: GQHSDVRSLTPDEQVGSRGRNCL*PHLVST Trigger: AGTGGAAACTAGATGAGGCCACAGACAGTTTCTTCC...CCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAACATCACTGTGCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR CCA 90 bp | GCCAGCCACCCTGTGCAAACTGCAACAGTCTCTTCTAGAGAAAATGAAAGCAAACCCGCCTGTGACCACTaGCCGTGCGTATTCTACAAA | + |
Preference number: 4 (lower is better) Translates to: ASHPVQTATVSSRENESKPACDH*PCVFYK Trigger: TTTGTAGAATACGCACGGCCAGTGGTCACAGGCGGG...TTTGCTTTCATTTTCTCTAGAAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045366.10 ENSMUST00000110840.8 |
||
CDS-3UTR TCA 90 bp | TACAGCACATATGGGGCATGCTTTCTGTGTTTAGGCATTGACGAGTCCCCTGTCTTGCTAAATTCACATTaGGTGGCGGCCCTGAACTTC | + |
Preference number: 4 (lower is better) Translates to: YSTYGACFLCLGIDESPVLLNSH*VAALNF Trigger: GAAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAA...GACAGGGGACTCGTCAATGCCTAAACACAGAAAGCATGCCCCATATGTGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
CDS-3UTR GCA 90 bp | AAATGTATATGGCTTTCGAAGGGCTGGACACTGGGCACTGAAAACATCATAGACGCTAGCCTGAGTGCATaGCATGAACTGGCGGACCTT | + |
Preference number: 4 (lower is better) Translates to: KCIWLSKGWTLGTENIIDASLSA*HELADL Trigger: AAGGTCCGCCAGTTCATGGCATGCACTCAGGCTAGC...GTCTATGATGTTTTCAGTGCCCAGTGTCCAGCCCTTCGAAAGCCATATACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR GCA 90 bp | GGAACGTGCTACAAGTGTGGTTCTGGCATGAAGAACACTGGGTTTGGAAGTCTTGTGGGTCTTTGTACCTaGTGTACAGTTGCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: GTCYKCGSGMKNTGFGSLVGLCT*CTVAPA Trigger: AGCTGGAGCAACTGTACAGCAGGTACAAAGACCCAC...AAGACTTCCAAACCCAGTGTTCTTCATGCCAGAACCACACTTGTAGCACGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR CCA 90 bp | TCAGCCCTGCGAACAGGGTCTACGTTGCTTTCTCTAAAGACAAGTCATGCAGGCGGAAGAAACTGTCTGTaGCCTCATCTAGTTTCCACT | + |
Preference number: 4 (lower is better) Translates to: SALRTGSTLLSLKTSHAGGRNCL*PHLVST Trigger: AGTGGAAACTAGATGAGGCCACAGACAGTTTCTTCC...GCCTGCATGACTTGTCTTTAGAGAAAGCAACGTAGACCCTGTTCGCAGGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR CCA 90 bp | GGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTGCTCTTGCTCCAGTCTaGGGAGAAGAGCTTTCAGCC | + |
Preference number: 4 (lower is better) Translates to: GTHKAWKEVVFQVFTKSVALAPV*GEELSA Trigger: GGCTGAAAGCTCTTCTCCCCAGACTGGAGCAAGAGC...AACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
||
3UTR CAA 72 bp | TGCTGTCACCAGGGCTGTTGTTTGTGGACCCAAAACTaGTTCTTGCACACTCTACTCACTTCAGAGAGCTCA | + |
Preference number: 4 (lower is better) Translates to: CCHQGCCLWTQN*FLHTLLTSESS Trigger: TGAGCTCTCTGAAGTGAGTAGAGTGTGCAAGAACAAGTTTTGGGTCCACAAACAACAGCCCTGGTGACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR TCA 90 bp | AGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAACCTGAGTGCATGCCATaGACTGGCGGACCTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: RKLFSRFSLSQFGYVRSQPECMP*TGGPCP Trigger: AGGACAAGGTCCGCCAGTTCATGGCATGCACTCAGG...TTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
||
CDS-3UTR TCA 90 bp | GTCTGCACGTCAGCCACTGCAGCCTTTAAGCAGAGTAAGGGTTTGCTTCATGAGGGAATTGATCTTTTGTaGTGCTCCAGCAGAAATGTG | + |
Preference number: 4 (lower is better) Translates to: VCTSATAAFKQSKGLLHEGIDLL*CSSRNV Trigger: CACATTTCTGCTGGAGCATCACAAAAGATCAATTCC...CTCATGAAGCAAACCCTTACTCTGCTTAAAGGCTGCAGTGGCTGACGTGCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045366.10 |
||
CDS-3UTR GCA 90 bp | CTTCCAAATGTATATGGCTTTCGAAGGGCTGGACACTGGGCACTGAAAACATCAGTGGGTCTTTGTACCTaGTGTACAGTTGCTCCAGCT | + |
Preference number: 4 (lower is better) Translates to: LPNVYGFRRAGHWALKTSVGLCT*CTVAPA Trigger: AGCTGGAGCAACTGTACAGCAGGTACAAAGACCCAC...TGATGTTTTCAGTGCCCAGTGTCCAGCCCTTCGAAAGCCATATACATTTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR GCA 90 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCGCTCCTAAGCCCTTCTaGCCAGGGTTCTTAGCGAAG | + |
Preference number: 4 (lower is better) Translates to: TEVNYKSGTHKAWKEVVFAPKPF*PGFLAK Trigger: CTTCGCTAAGAACCCTGGGCAGAAGGGCTTAGGAGC...GAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110838.8 ENSMUST00000110840.8 |
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CDS-3UTR CCA 90 bp | TTGTTTGTGGACCCAAAACTTGTTCTTGCACACTCTACTCACTTCAGAGAGCTCAACGCCTCGGGGTTTTaGAAGAAACTGTCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: LFVDPKLVLAHSTHFRELNASGF*KKLSVA Trigger: GGCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTT...GAGCTCTCTGAAGTGAGTAGAGTGTGCAAGAACAAGTTTTGGGTCCACAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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CDS-3UTR CCA 90 bp | CCTGTGCCAGCCACCCTGTGCAAACTGCAACAGTCTCTTCTAGAGAAAATGAAATGCTCCAGCTTCTTCTaGTCCACACTGCTCTTCATA | + |
Preference number: 4 (lower is better) Translates to: PVPATLCKLQQSLLEKMKCSSFF*STLLFI Trigger: TATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCA...TTTCATTTTCTCTAGAAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR TCA 90 bp | AACTGTAACATGATTCCAGTTTGGAAACGGCTGGTGCTCACCGTAACGTCAGGACGGACCTTGTCCTTCTaGGCTGATTTAAGTTTATGC | + |
Preference number: 4 (lower is better) Translates to: NCNMIPVWKRLVLTVTSGRTLSF*ADLSLC Trigger: GCATAAACTTAAATCAGCTCAGAAGGACAAGGTCCG...TCCTGACGTTACGGTGAGCACCAGCCGTTTCCAAACTGGAATCATGTTACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR GCA 90 bp | CAAACAAAAAGTGAGCTGGGCTGTAGTTCAGCTGTAGAGCACTTGTTTAGCATGTACCTGCTGTACAGTTaGTCCAGCTTCTTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: QTKSELGCSSAVEHLFSMYLLYS*SSFFWS Trigger: GGACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTA...CATGCTAAACAAGTGCTCTACAGCTGAACTACAGCCCAGCTCACTTTTTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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CDS-3UTR CCA 90 bp | AGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAAGCTCTTGCTCCAGTCTaGGGAGAAGAGCTTTCAGCC | + |
Preference number: 4 (lower is better) Translates to: RKLFSRFSLSQFGYVRSQALAPV*GEELSA Trigger: GGCTGAAAGCTCTTCTCCCCAGACTGGAGCAAGAGC...TTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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3UTR CAA 72 bp | GGCTTTGGGTGTGGATTCCTTCTGGATGACGTATGTTaGCTTCCAAATGTATATGGCTTTCGAAGGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: GFGCGFLLDDVC*LPNVYGFRRAG Trigger: TCCAGCCCTTCGAAAGCCATATACATTTGGAAGCAAACATACGTCATCCAGAAGGAATCCACACCCAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR GCA 90 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCTACCTGCTGTACAGTTaGTCCAGCTTCTTCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: TEVNYKSGTHKAWKEVVFYLLYS*SSFFWS Trigger: GGACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTA...GAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR GCA 90 bp | GGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTAAATCTAAGCCCTTCTaGCCAGGGTTCTTAGCGAAG | + |
Preference number: 4 (lower is better) Translates to: GTHKAWKEVVFQVFTKSVKSKPF*PGFLAK Trigger: CTTCGCTAAGAACCCTGGGCAGAAGGGCTTAGATTT...AACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045366.10 ENSMUST00000110839.10 |
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CDS-3UTR CCA 90 bp | CACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTAAACGCCTCGGGGTTTTaGAAGAAACTGTCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: HKAWKEVVFQVFTKSVWLNASGF*KKLSVA Trigger: GGCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTT...TAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR CCA 90 bp | TTACACATACATGGTAGCAGGGCACCACTAGACAAGATCCAGTCCACCCTAGAGAAGCTTCCTTTTGGTTaGGCACAAAAGGTAAGAAAC | + |
Preference number: 4 (lower is better) Translates to: LHIHGSRAPLDKIQSTLEKLPFG*AQKVRN Trigger: GTTTCTTACCTTTTGTGCCCAACCAAAAGGAAGCTT...CTCTAGGGTGGACTGGATCTTGTCTAGTGGTGCCCTGCTACCATGTATGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
||
CDS-3UTR TCA 90 bp | ACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACTTGCTAAATTCACATTaGGTGGCGGCCCTGAACTTC | + |
Preference number: 4 (lower is better) Translates to: TKPGRKLFSRFSLSQFGYLLNSH*VAALNF Trigger: GAAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAA...GTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR TCA 90 bp | ACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACCGGACCTTGTCCTTCTaGGCTGATTTAAGTTTATGC | + |
Preference number: 4 (lower is better) Translates to: TKPGRKLFSRFSLSQFGYRTLSF*ADLSLC Trigger: GCATAAACTTAAATCAGCTCAGAAGGACAAGGTCCG...GTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR CCA 90 bp | ACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGGAAGAAACTGTCTGTaGCCTCATCTAGTTTCCACT | + |
Preference number: 4 (lower is better) Translates to: TKPGRKLFSRFSLSQFGYGRNCL*PHLVST Trigger: AGTGGAAACTAGATGAGGCCACAGACAGTTTCTTCC...GTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR CAA 72 bp | CAAAATCTAGGAGAAGGTTCCAAGTATCCCTTGGAATaGATCTTTTGTGATGCTCCAGCAGAAATGTGTTCC | + |
Preference number: 4 (lower is better) Translates to: QNLGEGSKYPLE*IFCDAPAEMCS Trigger: GGAACACATTTCTGCTGGAGCATCACAAAAGATCAATTCCAAGGGATACTTGGAACCTTCTCCTAGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
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CDS-3UTR TCA 90 bp | AAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAAAGACGGACCTTGTCCTTCTaGGCTGATTTAAGTTTATGC | + |
Preference number: 4 (lower is better) Translates to: KLFSRFSLSQFGYVRSQRRTLSF*ADLSLC Trigger: GCATAAACTTAAATCAGCTCAGAAGGACAAGGTCCG...TCTTTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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3UTR CAA 72 bp | TGTTTCCAAAATCTAGGAGAAGGTTCCAAGTATCCCTaGGAATTGATCTTTTGTGATGCTCCAGCAGAAATG | + |
Preference number: 4 (lower is better) Translates to: CFQNLGEGSKYP*ELIFCDAPAEM Trigger: CATTTCTGCTGGAGCATCACAAAAGATCAATTCCAAGGGATACTTGGAACCTTCTCCTAGATTTTGGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
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CDS-3UTR CAA 90 bp | GGTGACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGAAACGCCTCGGGGTTTaGGAAGAAACTGTCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: GDTAQTQAQTGETGLWVWKRLGV*EETVCG Trigger: GCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTTT...CCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR CAA 90 bp | GAGAAGTCACTTCTCCCCTCCACCACGTGGCTCGCAGGGACTGAACTCAGGCTGAAACGCCTCGGGGTTTaGGAAGAAACTGTCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: EKSLLPSTTWLAGTELRLKRLGV*EETVCG Trigger: GCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTTT...CAGCCTGAGTTCAGTCCCTGCGAGCCACGTGGTGGAGGGGAGAAGTGACTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR CAA 90 bp | ATGCAGGCGGCTTCTAAAGCACTAGGTCTGCCCATGTCCCCGATGTCCCGAGGCAAACGCCTCGGGGTTTaGGAAGAAACTGTCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: MQAASKALGLPMSPMSRGKRLGV*EETVCG Trigger: GCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTTT...GCCTCGGGACATCGGGGACATGGGCAGACCTAGTGCTTTAGAAGCCGCCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR CAA 90 bp | GGTGACACGGCACAGACCCAGGCGCAGACAGGTGAGACAGGGCTTTGGGTGTGGAAGTATCCCTTGGAATaGATCTTTTGTGATGCTCCT | + |
Preference number: 5 (lower is better) Translates to: GDTAQTQAQTGETGLWVWKYPLE*IFCDAP Trigger: AGGAGCATCACAAAAGATCAATTCCAAGGGATACTT...CCACACCCAAAGCCCTGTCTCACCTGTCTGCGCCTGGGTCTGTGCCGTGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110838.8 |
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CDS-3UTR CAA 90 bp | CAGTTTGAGAAGTACCCAGCTGACATCGATCTGACTGCCCTGCTCTGTCCTCTGGTACCTGCTGTACAGTaGCTCCAGCTTCTTCTGGTC | + |
Preference number: 5 (lower is better) Translates to: QFEKYPADIDLTALLCPLVPAVQ*LQLLLV Trigger: GACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTAC...CAGAGGACAGAGCAGGGCAGTCAGATCGATGTCAGCTGGGTACTTCTCAAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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CDS TCA 90 bp | TGCTCCAGCTTCTTCTGGTCCACACTGCTCTTCATAGACTCTCGGTaGAACGCCTCGGGGTTTTGGAAGAAACTGTCTGTGGCCTCATCT | + |
Preference number: 5 (lower is better) Translates to: CSSFFWSTLLFIDSR*NASGFWKKLSVASS Trigger: AGATGAGGCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTTTCACCGAGAGTCTATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 ENSMUST00000203604.2 |
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CDS-3UTR CAA 90 bp | TGTGGGGAGTACATGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGAAACGCCTCGGGGTTTaGGAAGAAACTGTCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: CGEYMHFMAHVWRSEDNWKRLGV*EETVCG Trigger: GCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTTT...CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR CAA 90 bp | TCAGCCCTGCGAACAGGGTCTACGTTGCTTTCTCTAAAGACAAGTCATGCAGGCGTACCTGCTGTACAGTaGCTCCAGCTTCTTCTGGTC | + |
Preference number: 5 (lower is better) Translates to: SALRTGSTLLSLKTSHAGVPAVQ*LQLLLV Trigger: GACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTAC...GCCTGCATGACTTGTCTTTAGAGAAAGCAACGTAGACCCTGTTCGCAGGGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR CAA 90 bp | TGTGGGGAGTACATGCATTTCATGGCACATGTGTGGAGGTCAGAGGACAACTGGGTACCTGCTGTACAGTaGCTCCAGCTTCTTCTGGTC | + |
Preference number: 5 (lower is better) Translates to: CGEYMHFMAHVWRSEDNWVPAVQ*LQLLLV Trigger: GACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTAC...CCAGTTGTCCTCTGACCTCCACACATGTGCCATGAAATGCATGTACTCCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR CAA 90 bp | CTCTGTGCTGTGGCTCTCTGTAAGCAGCGGACCTGTGCAGCCTCCTGCTTGATGAAAGCTTCCTTTTGGTaGGGCACAAAAGGTAAGAAA | + |
Preference number: 5 (lower is better) Translates to: LCAVALCKQRTCAASCLMKASFW*GTKGKK Trigger: TTTCTTACCTTTTGTGCCCAACCAAAAGGAAGCTTT...CATCAAGCAGGAGGCTGCACAGGTCCGCTGCTTACAGAGAGCCACAGCACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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CDS-3UTR CAA 90 bp | CACAGTGATGTTCGAAGCTTGACACCAGATGAGCAGGTAGGATCCAGGCCCTCTTTTGCTAAATTCACATaGAGTGGCGGCCCTGAACTT | + |
Preference number: 5 (lower is better) Translates to: HSDVRSLTPDEQVGSRPSFAKFT*SGGPEL Trigger: AAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAAA...AGAGGGCCTGGATCCTACCTGCTCATCTGGTGTCAAGCTTCGAACATCACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS GCA 90 bp | CCAATTTTGTTTTCGTCCTGTGGGTCTTTGTACCTGCTGTACAGTTaGTCCAGCTTCTTCTGGTCCACACTGCTCTTCATAGACTCTCGG | + |
Preference number: 5 (lower is better) Translates to: PILFSSCGSLYLLYS*SSFFWSTLLFIDSR Trigger: CCGAGAGTCTATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTACAAAGACCCACAGGACGAAAACAAAATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203604.2 |
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CDS-3UTR CAA 90 bp | AGAGTCCGGAACGTGCTACAAGTGTGGTTCTGGCATGAAGAACACTGGGTTTGGTTTGCTAAATTCACATaGAGTGGCGGCCCTGAACTT | + |
Preference number: 5 (lower is better) Translates to: RVRNVLQVWFWHEEHWVWFAKFT*SGGPEL Trigger: AAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAAA...CCAAACCCAGTGTTCTTCATGCCAGAACCACACTTGTAGCACGTTCCGGACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203604.2 |
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CDS-3UTR CAA 90 bp | ATGTGTGGAGGTCAGAGGACAACTGGAGAAGTCACTTCTCCCCTCCACCACGTGAAGTATCCCTTGGAATaGATCTTTTGTGATGCTCCA | + |
Preference number: 5 (lower is better) Translates to: MCGGQRTTGEVTSPLHHVKYPLE*IFCDAP Trigger: TGGAGCATCACAAAAGATCAATTCCAAGGGATACTT...CACGTGGTGGAGGGGAGAAGTGACTTCTCCAGTTGTCCTCTGACCTCCACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045366.10 |
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CDS-3UTR CAA 90 bp | GAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCCAGAAACGCCTCGGGGTTTaGGAAGAAACTGTCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: EVNYKSGTHKAWKEVVFQKRLGV*EETVCG Trigger: GCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTTT...CTGGAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 |
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CDS-3UTR CAA 90 bp | AAAATAAGAAACTTCTCAGGAGGCAGCATCCAGGCCTATAGTGATAACCTCATTGTACCTGCTGTACAGTaGCTCCAGCTTCTTCTGGTC | + |
Preference number: 5 (lower is better) Translates to: KIRNFSGGSIQAYSDNLIVPAVQ*LQLLLV Trigger: GACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTAC...AATGAGGTTATCACTATAGGCCTGGATGCTGCCTCCTGAGAAGTTTCTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR CAA 90 bp | CCTGTGCCAGCCACCCTGTGCAAACTGCAACAGTCTCTTCTAGAGAAAATGAAAGGTTCCAAGTATCCCTaGGAATTGATCTTTTGTGAT | + |
Preference number: 5 (lower is better) Translates to: PVPATLCKLQQSLLEKMKGSKYP*ELIFCD Trigger: ATCACAAAAGATCAATTCCAAGGGATACTTGGAACC...TTTCATTTTCTCTAGAAGAGACTGTTGCAGTTTGCACAGGGTGGCTGGCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 |
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CDS-3UTR CAA 90 bp | ACAGAAGTTAACTACAAGTCAGGAACCCACAAAGCCTGGAAGGAAGTTGTTTTCTTTGCTAAATTCACATaGAGTGGCGGCCCTGAACTT | + |
Preference number: 5 (lower is better) Translates to: TEVNYKSGTHKAWKEVVFFAKFT*SGGPEL Trigger: AAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAAA...GAAAACAACTTCCTTCCAGGCTTTGTGGGTTCCTGACTTGTAGTTAACTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR CAA 90 bp | TGTTTAAAAAGCCTTTATCAATTACTGGTATGTCACAGCCTATTGACAATCCCAGTACCTGCTGTACAGTaGCTCCAGCTTCTTCTGGTC | + |
Preference number: 5 (lower is better) Translates to: CLKSLYQLLVCHSLLTIPVPAVQ*LQLLLV Trigger: GACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTAC...TGGGATTGTCAATAGGCTGTGACATACCAGTAATTGATAAAGGCTTTTTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR CAA 90 bp | CACAAAGCCTGGAAGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTATTTGCTAAATTCACATaGAGTGGCGGCCCTGAACTT | + |
Preference number: 5 (lower is better) Translates to: HKAWKEVVFQVFTKSVWLFAKFT*SGGPEL Trigger: AAGTTCAGGGCCGCCACTCAATGTGAATTTAGCAAA...TAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCTTCCAGGCTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 |
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CDS-3UTR CAA 90 bp | AGGAAGTTGTTTTCCAGGTTTTCACTAAGTCAGTTTGGTTACGTACGCTCTCAAGGTTCCAAGTATCCCTaGGAATTGATCTTTTGTGAT | + |
Preference number: 5 (lower is better) Translates to: RKLFSRFSLSQFGYVRSQGSKYP*ELIFCD Trigger: ATCACAAAAGATCAATTCCAAGGGATACTTGGAACC...TTGAGAGCGTACGTAACCAAACTGACTTAGTGAAAACCTGGAAAACAACTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 |
||
CDS TCA 72 bp | TTCTTCTGGTCCACACTGCTCTTCATAGACTCTCGGTaGAACGCCTCGGGGTTTTGGAAGAAACTGTCTGTG | + |
Preference number: 6 (lower is better) Translates to: FFWSTLLFIDSR*NASGFWKKLSV Trigger: CACAGACAGTTTCTTCCAAAACCCCGAGGCGTTTCACCGAGAGTCTATGAAGAGCAGTGTGGACCAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 ENSMUST00000203604.2 |
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CDS CCA 72 bp | GGTGAAACGCCTCGGGGTTTTGGAAGAAACTGTCTGTaGCCTCATCTAGTTTCCACTCATTCTGTGTCAAGC | + |
Preference number: 6 (lower is better) Translates to: GETPRGFGRNCL*PHLVSTHSVSS Trigger: GCTTGACACAGAATGAGTGGAAACTAGATGAGGCCACAGACAGTTTCTTCCAAAACCCCGAGGCGTTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203467.3 ENSMUST00000203604.2 |
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CDS CAA 72 bp | GTTTTCGTCCTGTGGGTCTTTGTACCTGCTGTACAGTaGCTCCAGCTTCTTCTGGTCCACACTGCTCTTCAT | + |
Preference number: 6 (lower is better) Translates to: VFVLWVFVPAVQ*LQLLLVHTALH Trigger: ATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTACAAAGACCCACAGGACGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203604.2 |
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CDS GCA 72 bp | TTTTCGTCCTGTGGGTCTTTGTACCTGCTGTACAGTTaGTCCAGCTTCTTCTGGTCCACACTGCTCTTCATA | + |
Preference number: 6 (lower is better) Translates to: FSSCGSLYLLYS*SSFFWSTLLFI Trigger: TATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTACAAAGACCCACAGGACGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203604.2 |
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CDS CAA 90 bp | TCCAATTTTGTTTTCGTCCTGTGGGTCTTTGTACCTGCTGTACAGTaGCTCCAGCTTCTTCTGGTCCACACTGCTCTTCATAGACTCTCG | + |
Preference number: 6 (lower is better) Translates to: SNFVFVLWVFVPAVQ*LQLLLVHTALHRLS Trigger: CGAGAGTCTATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCAACTGTACAGCAGGTACAAAGACCCACAGGACGAAAACAAAATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045366.10 ENSMUST00000110838.8 ENSMUST00000110839.10 ENSMUST00000110840.8 ENSMUST00000203604.2 |
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CDS GCA 72 bp | CAATTTTGTTTTCGTCCTGTGGGTCTGCTGTACAGTTaGTCCAGCTTCTTCTGGTCCACACTGCTCTTCATA | + |
Preference number: 6 (lower is better) Translates to: QFCFRPVGLLYS*SSFFWSTLLFI Trigger: TATGAAGAGCAGTGTGGACCAGAAGAAGCTGGAGCAACTGTACAGCAGACCCACAGGACGAAAACAAAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203467.3 |
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CDS CAA 90 bp | TCATGTTTCCAAAATCTAGGAGAAGGTTCCAAGTATCCCTTGGAATaGATCTTTTGTGATGCTCCTAAGCCCTTCTGCCCAGGGTTCTTA | + |
Preference number: 6 (lower is better) Translates to: SCFQNLGEGSKYPLE*IFCDAPKPFCPGFL Trigger: TAAGAACCCTGGGCAGAAGGGCTTAGGAGCATCACAAAAGATCAATTCCAAGGGATACTTGGAACCTTCTCCTAGATTTTGGAAACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110838.8 |