Pregenerated sensors for DCUN1D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027708Ensembl transcript IDs: ENSMUST00000108182.10, ENSMUST00000178098.8, ENSMUST00000198389.5
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGCCGCAGTATACAACTAACGCAGTTAAATAAACAACACAGCTaGGCACATTGTAAACATTACGGAGCAAACACGTGGCGTAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: QCRSIQLTQLNKQHS*AHCKHYGANTWRSF Trigger: GAAGCTACGCCACGTGTTTGCTCCGTAATGTTTACAATGTGCTCAGCTGTGTTGTTTATTTAACTGCGTTAGTTGTATACTGCGGCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR GCA 90 bp | ACAGTCAAAAGTCAAATAATTTATAGAACAGAAGCCATTGGTATCTaGACCAGTGCTCGCCTGTCTGACAATCTCTGCTTCTGGAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: TVKSQIIYRTEAIGI*TSARLSDNLCFWSR Trigger: TCTACTCCAGAAGCAGAGATTGTCAGACAGGCGAGCACTGGTGCAGATACCAATGGCTTCTGTTCTATAAATTATTTGACTTTTGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR TCA 90 bp | CTATTAAAGACACAATTTAACATTCAGAGCCACATAAACGCTCACTaGACGGTCATTCATGTTACAAGGGCATACTTTGTAAACAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: LLKTQFNIQSHINAH*TVIHVTRAYFVNKY Trigger: ATACTTGTTTACAAAGTATGCCCTTGTAACATGAATGACCGTTCAGTGAGCGTTTATGTGGCTCTGAATGTTAAATTGTGTCTTTAATAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTCTCCCTATGGTTCTGTCTGGAAAGAAAAGAATCAGCTTGGAGACCTGACATAGCTGGCTGTGTGTaGGTGAGTGTGCCCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KLSLWFCLERKESAWRPDIAGCV*VSVPFL Trigger: GAGGAAGGGCACACTCACTCACACACAGCCAGCTAT...GTCAGGTCTCCAAGCTGATTCTTTTCTTTCCAGACAGAACCATAGGGAGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CCA 90 bp | AAACTCTCCCTATGGTTCTGTCTGGAAAGAAAAGAATCAGCTTGGAGACCTGACAGCAGCCAACATGGCTaGACCACGCCTCAAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: KLSLWFCLERKESAWRPDSSQHG*TTPQRA Trigger: TGCTCTTTGAGGCGTGGTCCAGCCATGTTGGCTGCT...GTCAGGTCTCCAAGCTGATTCTTTTCTTTCCAGACAGAACCATAGGGAGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAGAGCAGTGCCATGGGAGAAAGGTTGAACTTCACGGCTCATCACAACCATTGAATTATGAGGATTaGTCTTCAGTCCAGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LKEQCHGRKVELHGSSQPLNYED*SSVQPA Trigger: TGCTGGCTGGACTGAAGATCAATCCTCATAATTCAA...TGGTTGTGATGAGCCGTGAAGTTCAACCTTTCTCCCATGGCACTGCTCTTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR-3UTR CCA 90 bp | AAACTCTCCCTATGGTTCTGTCTGGAAAGAAAAGAATCAGCTTGGAGACCTGACGACAATCTCTGCTTCTaGAGTAGACTTGGCAACCAC | + |
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Preference number: 2 (lower is better) Translates to: KLSLWFCLERKESAWRPDDNLCF*SRLGNH Trigger: GTGGTTGCCAAGTCTACTCCAGAAGCAGAGATTGTC...GTCAGGTCTCCAAGCTGATTCTTTTCTTTCCAGACAGAACCATAGGGAGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR GCA 90 bp | AAACTCTCCCTATGGTTCTGTCTGGAAAGAAAAGAATCAGCTTGGAGACCTGACTCTCATTTGAAGTGCTaGCAGCACAGTCTTTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: KLSLWFCLERKESAWRPDSHLKC*QHSLCN Trigger: GTTGCAAAGACTGTGCTGGCAGCACTTCAAATGAGA...GTCAGGTCTCCAAGCTGATTCTTTTCTTTCCAGACAGAACCATAGGGAGAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR GCA 90 bp | AAATCCGATTATGTGGTGTGTGATGCACGAGTGTGGAGTCTAACATCTGATCTCTCTCATTTGAAGTGCTaGCAGCACAGTCTTTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: KSDYVVCDARVWSLTSDLSHLKC*QHSLCN Trigger: GTTGCAAAGACTGTGCTGGCAGCACTTCAAATGAGA...GAGATCAGATGTTAGACTCCACACTCGTGCATCACACACCACATAATCGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAGAAGCCATTGGTATCTaGACCAGTGCTCGCCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTEAIGI*TSARLS Trigger: AGACAGGCGAGCACTGGTGCAGATACCAATGGCTTC...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | AAACTCTCCCTATGGTTCTGTCTGGAAAGAAAAGAATCAGCTTGGAGACCTGACACCATCAAGCTTCTATaGCTTATGGGAAGACAGACT | + |
|
Preference number: 2 (lower is better) Translates to: KLSLWFCLERKESAWRPDTIKLL*LMGRQT Trigger: AGTCTGTCTTCCCATAAGTCATAGAAGCTTGATGGT...GTCAGGTCTCCAAGCTGATTCTTTTCTTTCCAGACAGAACCATAGGGAGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | AAATCCGATTATGTGGTGTGTGATGCACGAGTGTGGAGTCTAACATCTGATCTCACCATCAAGCTTCTATaGCTTATGGGAAGACAGACT | + |
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Preference number: 2 (lower is better) Translates to: KSDYVVCDARVWSLTSDLTIKLL*LMGRQT Trigger: AGTCTGTCTTCCCATAAGTCATAGAAGCTTGATGGT...GAGATCAGATGTTAGACTCCACACTCGTGCATCACACACCACATAATCGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACACCATGGGAGAAAGGTTaGACTTCACGGCTCATCACA | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTPWEKG*TSRLIT Trigger: TGTGATGAGCCGTGAAGTTCAACCTTTCTCCCATGG...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACACGCCTCAAAGAGCAGTaGCATGGGAGAAAGGTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTRLKEQ*HGRKVE Trigger: TTCAACCTTTCTCCCATGGCACTGCTCTTTGAGGCG...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAACCAAACACCATTTCAGATGCGGTACACTCAGATAAATCACTCTCATTTGTTGAATTATGAGGATTaGTCTTCAGTCCAGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PNQTPFQMRYTQINHSHLLNYED*SSVQPA Trigger: TGCTGGCTGGACTGAAGATCAATCCTCATAATTCAA...CAAATGAGAGTGATTTATCTGAGTGTACCGCATCTGAAATGGTGTTTGGTTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR-3UTR TCA 90 bp | AAATCCGATTATGTGGTGTGTGATGCACGAGTGTGGAGTCTAACATCTGATCTCCCTCAGTTTGAATTATaGGGATTGATCTTCAGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KSDYVVCDARVWSLTSDLPQFEL*GLIFSP Trigger: TGGACTGAAGATCAATCCTCATAATTCAAACTGAGG...GAGATCAGATGTTAGACTCCACACTCGTGCATCACACACCACATAATCGGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR-3UTR TCA 90 bp | AAACTCTCCCTATGGTTCTGTCTGGAAAGAAAAGAATCAGCTTGGAGACCTGACACCTTTCTGAGCGTCTaGAACACAAGACATATTTCA | + |
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Preference number: 2 (lower is better) Translates to: KLSLWFCLERKESAWRPDTFLSV*NTRHIS Trigger: TGAAATATGTCTTGTGTTTCAGACGCTCAGAAAGGT...GTCAGGTCTCCAAGCTGATTCTTTTCTTTCCAGACAGAACCATAGGGAGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | AAATCCGATTATGTGGTGTGTGATGCACGAGTGTGGAGTCTAACATCTGATCTCACCTTTCTGAGCGTCTaGAACACAAGACATATTTCA | + |
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Preference number: 2 (lower is better) Translates to: KSDYVVCDARVWSLTSDLTFLSV*NTRHIS Trigger: TGAAATATGTCTTGTGTTTCAGACGCTCAGAAAGGT...GAGATCAGATGTTAGACTCCACACTCGTGCATCACACACCACATAATCGGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAGACAATCTCTGCTTCTaGAGTAGACTTGGCAACCAC | + |
|
Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTDNLCF*SRLGNH Trigger: GTGGTTGCCAAGTCTACTCCAGAAGCAGAGATTGTC...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAAACACACAAGCAGGGTaGGCATGGAATGGCTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTNTQAG*AWNGSK Trigger: TTTTGAGCCATTCCATGCCCACCCTGCTTGTGTGTT...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAGACTGCATTCTGCTGTaGTGTGGAAATAGCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTDCILL*CGNSKC Trigger: GCATTTGCTATTTCCACATCACAGCAGAATGCAGTC...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTAAGAATTATTCAGGAAAGAGATTACATAAAAGGCTCCCGATGGTTTCAGCAGGAGAGCAAGGCATaGGTCCTGTCATGGAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: CLRIIQERDYIKGSRWFQQESKA*VLSWKN Trigger: GTTTTTCCATGACAGGACTCATGCCTTGCTCTCCTG...CTGAAACCATCGGGAGCCTTTTATGTAATCTCTTTCCTGAATAATTCTTAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTAAGAATTATTCAGGAAAGAGATTACATAAAAGGCTCCCGATGGTTTCAGCTGAAGAACATTCCTTaGTACCCTGCAGAGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: CLRIIQERDYIKGSRWFQLKNIP*YPAEDL Trigger: CAGGTCCTCTGCAGGGTACCAAGGAATGTTCTTCAG...CTGAAACCATCGGGAGCCTTTTATGTAATCTCTTTCCTGAATAATTCTTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAAGAAAAGAATCAGCTTaGAGACCTGACCCACACGAA | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTRKESA*RPDPHE Trigger: TTCGTGTGGGTCAGGTCTCCAAGCTGATTCTTTTCT...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACATTGAATTATGAGGATTaGTCTTCAGTCCAGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTLNYED*SSVQPA Trigger: TGCTGGCTGGACTGAAGATCAATCCTCATAATTCAA...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAACCATCAAGCTTCTATaGCTTATGGGAAGACAGACT | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTTIKLL*LMGRQT Trigger: AGTCTGTCTTCCCATAAGTCATAGAAGCTTGATGGT...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAGAGGACCTGGATACATaGAGCAAAATCTGTTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTEDLDT*SKICSY Trigger: ATAGGAACAGATTTTGCTTCATGTATCCAGGTCCTC...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTTAAGAATTATTCAGGAAAGAGATTACATAAAAGGCTCCCGATGGTTTCAGCTGTCTGACAATCTCTaGTTCTGGAGTAGACTTGGC | + |
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Preference number: 2 (lower is better) Translates to: CLRIIQERDYIKGSRWFQLSDNL*FWSRLG Trigger: GCCAAGTCTACTCCAGAAGCAGAGATTGTCAGACAG...CTGAAACCATCGGGAGCCTTTTATGTAATCTCTTTCCTGAATAATTCTTAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAAGGGTGGGCATGGAATaGCTCAAAAACTTATCATCA | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTRVGME*LKNLSS Trigger: TGATGATAAGTTTTTGAGCCATTCCATGCCCACCCT...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAACCTTTCTGAGCGTCTaGAACACAAGACATATTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTTFLSV*NTRHIS Trigger: TGAAATATGTCTTGTGTTTCAGACGCTCAGAAAGGT...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAAAAATCTGTTCCTATTaGAGACCAGTCACCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTKICSY*RPVTQH Trigger: ATGTTGGGTGACTGGTCTTCAATAGGAACAGATTTT...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR CAA 90 bp | ATTTCTTATATCAGGTATTCTACTCACACCAGCAGTACATGTAGTTaGCCAGGAAAATTAAATTCCCCCAACCAAACACCATTTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: ISYIRYSTHTSSTCS*PGKLNSPNQTPFQM Trigger: CATCTGAAATGGTGTTTGGTTGGGGGAATTTAATTTTCCTGGCAAACTACATGTACTGCTGGTGTGAGTAGAATACCTGATATAAGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR-3UTR TCA 90 bp | TGTTTAAGAATTATTCAGGAAAGAGATTACATAAAAGGCTCCCGATGGTTTCAGCCTCAGTTTGAATTATaGGGATTGATCTTCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: CLRIIQERDYIKGSRWFQPQFEL*GLIFSP Trigger: TGGACTGAAGATCAATCCTCATAATTCAAACTGAGG...CTGAAACCATCGGGAGCCTTTTATGTAATCTCTTTCCTGAATAATTCTTAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTAAGAATTATTCAGGAAAGAGATTACATAAAAGGCTCCCGATGGTTTCAGAAATCAATTTTCTCTTaGAGCCCTAGCAAGTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: CLRIIQERDYIKGSRWFQKSIFS*SPSKSC Trigger: ACAAGACTTGCTAGGGCTCCAAGAGAAAATTGATTT...CTGAAACCATCGGGAGCCTTTTATGTAATCTCTTTCCTGAATAATTCTTAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTAAGAATTATTCAGGAAAGAGATTACATAAAAGGCTCCCGATGGTTTCAGAGTAAACTCTCCCTATaGTTCTGTCTGGAAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: CLRIIQERDYIKGSRWFQSKLSL*FCLERK Trigger: TTTTCTTTCCAGACAGAACCATAGGGAGAGTTTACT...CTGAAACCATCGGGAGCCTTTTATGTAATCTCTTTCCTGAATAATTCTTAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR GCA 72 bp | GCAGCCAACATGGCTGGACCACGCCTCAAAGAGCAGTaGCATGGGAGAAAGGTTGAACTTCACGGCTCATCA | + |
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Preference number: 3 (lower is better) Translates to: AANMAGPRLKEQ*HGRKVELHGSS Trigger: TGATGAGCCGTGAAGTTCAACCTTTCTCCCATGGCACTGCTCTTTGAGGCGTGGTCCAGCCATGTTGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR TCA 72 bp | GTTCTGTCTGGAAAGAAAAGAATCAGCTTGGAGACCTaGCCCACACGAAGACTGAACCCCATGATCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: VLSGKKRISLET*PTRRLNPMILC Trigger: GCAGAGGATCATGGGGTTCAGTCTTCGTGTGGGTCAGGTCTCCAAGCTGATTCTTTTCTTTCCAGACAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CAA 90 bp | CTCAAAGAGCAGTGCCATGGGAGAAAGGTTGAACTTCACGGCTCATCACAACCAATAAATCACTCTCATTaGAAGTGCTGCCAGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: LKEQCHGRKVELHGSSQPINHSH*KCCQHS Trigger: ACTGTGCTGGCAGCACTTCAAATGAGAGTGATTTAT...TGGTTGTGATGAGCCGTGAAGTTCAACCTTTCTCCCATGGCACTGCTCTTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR TCA 72 bp | ACCACAGACCTGTTCTGTAGAACCTTTCTGAGCGTCTaGAACACAAGACATATTTCAGGGAGTCCCCAGATT | + |
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Preference number: 3 (lower is better) Translates to: TTDLFCRTFLSV*NTRHISGSPQI Trigger: AATCTGGGGACTCCCTGAAATATGTCTTGTGTTTCAGACGCTCAGAAAGGTTCTACAGAACAGGTCTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR-3UTR CAA 90 bp | CTCAAAGAGCAGTGCCATGGGAGAAAGGTTGAACTTCACGGCTCATCACAACCAAGCAGTACATGTAGTTaGCCAGGAAAATTAAATTCC | + |
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Preference number: 3 (lower is better) Translates to: LKEQCHGRKVELHGSSQPSSTCS*PGKLNS Trigger: GGAATTTAATTTTCCTGGCAAACTACATGTACTGCT...TGGTTGTGATGAGCCGTGAAGTTCAACCTTTCTCCCATGGCACTGCTCTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAGCCATGGGAGAAAGGTaGAACTTCACGGCTCATCAC | + |
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Preference number: 3 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTAMGER*NFTAHH Trigger: GTGATGAGCCGTGAAGTTCAACCTTTCTCCCATGGC...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CAA 90 bp | AAATCCGATTATGTGGTGTGTGATGCACGAGTGTGGAGTCTAACATCTGATCTCATAAATCACTCTCATTaGAAGTGCTGCCAGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: KSDYVVCDARVWSLTSDLINHSH*KCCQHS Trigger: ACTGTGCTGGCAGCACTTCAAATGAGAGTGATTTAT...GAGATCAGATGTTAGACTCCACACTCGTGCATCACACACCACATAATCGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR GCA 72 bp | AGTCAAATAATTTATAGAACAGAAGCCATTGGTATCTaGACCAGTGCTCGCCTGTCTGACAATCTCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: SQIIYRTEAIGI*TSARLSDNLCF Trigger: GAAGCAGAGATTGTCAGACAGGCGAGCACTGGTGCAGATACCAATGGCTTCTGTTCTATAAATTATTTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR CCA 72 bp | TCCTTAACAGCAACACACGTAAACACACAAGCAGGGTaGGCATGGAATGGCTCAAAAACTTATCATCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: SLTATHVNTQAG*AWNGSKTYHQR Trigger: TCTTTGATGATAAGTTTTTGAGCCATTCCATGCCCACCCTGCTTGTGTGTTTACGTGTGTTGCTGTTAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACAATAAATCACTCTCATTaGAAGTGCTGCCAGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTINHSH*KCCQHS Trigger: ACTGTGCTGGCAGCACTTCAAATGAGAGTGATTTAT...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTAGGTCAACTTGCTCCTATTTGTATGCCAAAATGACAGGTTTCCAAACACAAAATCTGTTCCTATaGAAGACCAGTCACCCAACA | + |
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Preference number: 3 (lower is better) Translates to: SLRSTCSYLYAKMTGFQTQNLFL*KTSHPT Trigger: TGTTGGGTGACTGGTCTTCAATAGGAACAGATTTTG...TGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR TCA 72 bp | ACACAATTTAACATTCAGAGCCACATAAACGCTCACTaGACGGTCATTCATGTTACAAGGGCATACTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: TQFNIQSHINAH*TVIHVTRAYFV Trigger: TACAAAGTATGCCCTTGTAACATGAATGACCGTTCAGTGAGCGTTTATGTGGCTCTGAATGTTAAATTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTTAAGAATTATTCAGGAAAGAGATTACATAAAAGGCTCCCGATGGTTTCAGCCATATCTGCATAAATaGTTCCGCTATCCTGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: CLRIIQERDYIKGSRWFQPYLHK*FRYPEE Trigger: TTCTTCAGGATAGCGGAACAATTTATGCAGATATGG...CTGAAACCATCGGGAGCCTTTTATGTAATCTCTTTCCTGAATAATTCTTAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTTAAGAATTATTCAGGAAAGAGATTACATAAAAGGCTCCCGATGGTTTCAGAGCAGTACATGTAGTTaGCCAGGAAAATTAAATTCC | + |
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Preference number: 3 (lower is better) Translates to: CLRIIQERDYIKGSRWFQSSTCS*PGKLNS Trigger: GGAATTTAATTTTCCTGGCAAACTACATGTACTGCT...CTGAAACCATCGGGAGCCTTTTATGTAATCTCTTTCCTGAATAATTCTTAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| 3UTR CAA 72 bp | CTGCATAAATTGTTCCGCTATCCTGAAGAACATTCCTaGGTACCCTGCAGAGGACCTGGATACATGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LHKLFRYPEEHS*VPCRGPGYMKQ Trigger: TTGCTTCATGTATCCAGGTCCTCTGCAGGGTACCAAGGAATGTTCTTCAGGATAGCGGAACAATTTATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR CAA 72 bp | ATCAGGTATTCTACTCACACCAGCAGTACATGTAGTTaGCCAGGAAAATTAAATTCCCCCAACCAAACACCA | + |
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Preference number: 4 (lower is better) Translates to: IRYSTHTSSTCS*PGKLNSPNQTP Trigger: TGGTGTTTGGTTGGGGGAATTTAATTTTCCTGGCAAACTACATGTACTGCTGGTGTGAGTAGAATACCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| 3UTR CAA 72 bp | TCCCCAAATTATTCTCTTAGGTCAACTTGCTCCTATTaGTATGCCAAAATGACAGGTTTCCAAACAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SPNYSLRSTCSY*YAKMTGFQTVL Trigger: AAGGACTGTTTGGAAACCTGTCATTTTGGCATACAAATAGGAGCAAGTTGACCTAAGAGAATAATTTGGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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| CDS-3UTR CAA 90 bp | CTCAAAGAGCAGTGCCATGGGAGAAAGGTTGAACTTCACGGCTCATCACAACCAGATTCCACGTGTCTTTaGGTATTGATCGTTTATGAT | + |
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Preference number: 5 (lower is better) Translates to: LKEQCHGRKVELHGSSQPDSTCL*VLIVYD Trigger: ATCATAAACGATCAATACCAAAAGACACGTGGAATC...TGGTTGTGATGAGCCGTGAAGTTCAACCTTTCTCCCATGGCACTGCTCTTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 ENSMUST00000198389.5 |
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| CDS-3UTR CAA 90 bp | AAACTCTCCCTATGGTTCTGTCTGGAAAGAAAAGAATCAGCTTGGAGACCTGACGATTCCACGTGTCTTTaGGTATTGATCGTTTATGAT | + |
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Preference number: 5 (lower is better) Translates to: KLSLWFCLERKESAWRPDDSTCL*VLIVYD Trigger: ATCATAAACGATCAATACCAAAAGACACGTGGAATC...GTCAGGTCTCCAAGCTGATTCTTTTCTTTCCAGACAGAACCATAGGGAGAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108182.10 ENSMUST00000178098.8 |
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