Pregenerated sensors for DCTPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042462Ensembl transcript IDs: ENSMUST00000035276.5
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTAAGGTTCCGAGGCTGGTaGAACTGCTCCCAGTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLRFRGW*NCSQSR Trigger: GCGGGACTGGGAGCAGTTCCACCAGCCTCGGAACCT...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR GCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTACCAGTCCCGCTCAGCTaGAAACTCTGCATGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLPVPLS*KLCMEA Trigger: CGCCTCCATGCAGAGTTTGCAGCTGAGCGGGACTGG...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR GCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTACTCCTCCTGAAGGGCTaGTCTCTCCTTTGGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLLLLKG*SLLWWP Trigger: TGGCCACCAAAGGAGAGAGCAGCCCTTCAGGAGGAG...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR CCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTAGGCTGCTCTCTCCTTTaGTGGCCATGCTTGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLGCSLL*WPCLRT Trigger: GGTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCC...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR CCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTACCAGCCCCCACAGCCTaGTTTTCAGAGATGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLPAPTA*FSEMVP Trigger: TGGGACCATCTCTGAAAACCAGGCTGTGGGGGCTGG...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR TCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTATCGCTAAGCTCCTCCTaGAGGGCTGCTCTCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLSLSSS*RAALSF Trigger: AAAGGAGAGAGCAGCCCTTCAGGAGGAGCTTAGCGA...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR GCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTACTCCTTTGGTGGCCATaGTTGAGGACCAGGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLLLWWP*LRTRLC Trigger: ACAGAGCCTGGTCCTCAAGCATGGCCACCAAAGGAG...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR CCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTATGCTCTCTCCTTTGGTaGCCATGCTTGAGGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLCSLLW*PCLRTR Trigger: CCTGGTCCTCAAGCATGGCCACCAAAGGAGAGAGCA...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR CCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTAGGTAACGTTGGCGGTTaGTGTCCATTTTGGAGATTA | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLGNVGG*CPFWRL Trigger: TAATCTCCAAAATGGACACCAACCGCCAACGTTACC...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR CCA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTAGGTTGGTGTCCATTTTaGAGATTACTGCTTGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: VILLREKTLGPRLNKARLGWCPF*RLLLEV Trigger: TACCTCAAGCAGTAATCTCCAAAATGGACACCAACC...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 90 bp | CCGAGGCTGGTGGAACTGCTCCCAGTCCCGCTCAGCTGCAAACTCTaGATGGAGGCGTCGGATGTCCTCAAGCGTGGGCTCCGGACTGAA | + |
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Preference number: 5 (lower is better) Translates to: PRLVELLPVPLSCKL*MEASDVLKRGLRTE Trigger: TTCAGTCCGGAGCCCACGCTTGAGGACATCCGACGCCTCCATGCAGAGTTTGCAGCTGAGCGGGACTGGGAGCAGTTCCACCAGCCTCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 90 bp | ACTTCTCCCACCAAGGCTAGCAGCAGGTTCCGAGGCTGGTGGAACTaGTCCCAGTCCCGCTCAGCTGCAAACTCTGCATGGAGGCGTCGG | + |
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Preference number: 5 (lower is better) Translates to: TSPTKASSRFRGWWN*SQSRSAANSAWRRR Trigger: CCGACGCCTCCATGCAGAGTTTGCAGCTGAGCGGGACTGGGAGCAGTTCCACCAGCCTCGGAACCTGCTGCTAGCCTTGGTGGGAGAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 90 bp | GGCTGGTGGAACTGCTCCCAGTCCCGCTCAGCTGCAAACTCTGCATaGAGGCGTCGGATGTCCTCAAGCGTGGGCTCCGGACTGAATCTG | + |
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Preference number: 5 (lower is better) Translates to: GWWNCSQSRSAANSA*RRRMSSSVGSGLNL Trigger: CAGATTCAGTCCGGAGCCCACGCTTGAGGACATCCGACGCCTCCATGCAGAGTTTGCAGCTGAGCGGGACTGGGAGCAGTTCCACCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 90 bp | TCGCCCACTTCTCCCACCAAGGCTAGCAGCAGGTTCCGAGGCTGGTaGAACTGCTCCCAGTCCCGCTCAGCTGCAAACTCTGCATGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SPTSPTKASSRFRGW*NCSQSRSAANSAWR Trigger: CCTCCATGCAGAGTTTGCAGCTGAGCGGGACTGGGAGCAGTTCCACCAGCCTCGGAACCTGCTGCTAGCCTTGGTGGGAGAAGTGGGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 90 bp | AGCTCGCCCACTTCTCCCACCAAGGCTAGCAGCAGGTTCCGAGGCTaGTGGAACTGCTCCCAGTCCCGCTCAGCTGCAAACTCTGCATGG | + |
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Preference number: 5 (lower is better) Translates to: SSPTSPTKASSRFRG*WNCSQSRSAANSAW Trigger: CCATGCAGAGTTTGCAGCTGAGCGGGACTGGGAGCAGTTCCACCAGCCTCGGAACCTGCTGCTAGCCTTGGTGGGAGAAGTGGGCGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 90 bp | CAGCCTGGTTTTCAGAGATGGTCCCACGGGGCAAGTCAGTGTACTTaGAGGCAGAACCTCGGGACAGGTGGACTGGGTAACGTTGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: QPGFQRWSHGASQCT*RQNLGTGGLGNVGG Trigger: ACCGCCAACGTTACCCAGTCCACCTGTCCCGAGGTTCTGCCTGCAAGTACACTGACTTGCCCCGTGGGACCATCTCTGAAAACCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 90 bp | TGCTACCAGGTAGATGAGGACGTCGCTAAGCTCCTCCTGAAGGGCTaGTCTCTCCTTTGGTGGCCATGCTTGAGGACCAGGCTCTGTATC | + |
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Preference number: 5 (lower is better) Translates to: CYQVDEDVAKLLLKG*SLLWWPCLRTRLCI Trigger: GATACAGAGCCTGGTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCCCTTCAGGAGGAGCTTAGCGACGTCCTCATCTACCTGGTAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 90 bp | GAGGACGTCGCTAAGCTCCTCCTGAAGGGCTGCTCTCTCCTTTGGTaGCCATGCTTGAGGACCAGGCTCTGTATCAGACTTCCACTGGAA | + |
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Preference number: 5 (lower is better) Translates to: EDVAKLLLKGCSLLW*PCLRTRLCIRLPLE Trigger: TTCCAGTGGAAGTCTGATACAGAGCCTGGTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCCCTTCAGGAGGAGCTTAGCGACGTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 90 bp | GATGAGGACGTCGCTAAGCTCCTCCTGAAGGGCTGCTCTCTCCTTTaGTGGCCATGCTTGAGGACCAGGCTCTGTATCAGACTTCCACTG | + |
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Preference number: 5 (lower is better) Translates to: DEDVAKLLLKGCSLL*WPCLRTRLCIRLPL Trigger: CAGTGGAAGTCTGATACAGAGCCTGGTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCCCTTCAGGAGGAGCTTAGCGACGTCCTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 90 bp | GTCGCTAAGCTCCTCCTGAAGGGCTGCTCTCTCCTTTGGTGGCCATaGTTGAGGACCAGGCTCTGTATCAGACTTCCACTGGAAGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: VAKLLLKGCSLLWWP*LRTRLCIRLPLEEF Trigger: GAACTCTTCCAGTGGAAGTCTGATACAGAGCCTGGTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCCCTTCAGGAGGAGCTTAGCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 90 bp | CTCGGGACAGGTGGACTGGGTAACGTTGGCGGTTGGTGTCCATTTTaGAGATTACTGCTTGAGGTAAATCCACATGGCAGCGGGCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: LGTGGLGNVGGWCPF*RLLLEVNPHGSGLL Trigger: TAGCAGCCCGCTGCCATGTGGATTTACCTCAAGCAGTAATCTCCAAAATGGACACCAACCGCCAACGTTACCCAGTCCACCTGTCCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 90 bp | GGGCAAGTCAGTGTACTTGCAGGCAGAACCTCGGGACAGGTGGACTaGGTAACGTTGGCGGTTGGTGTCCATTTTGGAGATTACTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GQVSVLAGRTSGQVD*VTLAVGVHFGDYCL Trigger: CAAGCAGTAATCTCCAAAATGGACACCAACCGCCAACGTTACCCAGTCCACCTGTCCCGAGGTTCTGCCTGCAAGTACACTGACTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 90 bp | TGCAGGCAGAACCTCGGGACAGGTGGACTGGGTAACGTTGGCGGTTaGTGTCCATTTTGGAGATTACTGCTTGAGGTAAATCCACATGGC | + |
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Preference number: 5 (lower is better) Translates to: CRQNLGTGGLGNVGG*CPFWRLLLEVNPHG Trigger: GCCATGTGGATTTACCTCAAGCAGTAATCTCCAAAATGGACACCAACCGCCAACGTTACCCAGTCCACCTGTCCCGAGGTTCTGCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR CAA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTAGGGCTGCTCTCTCCTTaGGTGGCCATGCTTGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VILLREKTLGPRLNKARLGLLSP*VAMLED Trigger: GTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCCC...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR CAA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTAAGCAGCAGAGTCTTCTaGTCCCACAGTACCGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: VILLREKTLGPRLNKARLSSRVF*SHSTAL Trigger: GAGCGCGGTACTGTGGGACAAGAAGACTCTGCTGCT...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS-3UTR CAA 90 bp | GTCATTTTATTGAGAGAGAAAACACTTGGGCCCAGACTTAATAAGGCCAGATTAGTGGACTGGGTAACGTaGGCGGTTGGTGTCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: VILLREKTLGPRLNKARLVDWVT*AVGVHF Trigger: AAAATGGACACCAACCGCCAACGTTACCCAGTCCAC...TAATCTGGCCTTATTAAGTCTGGGCCCAAGTGTTTTCTCTCTCAATAAAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 72 bp | GTGGAACTGCTCCCAGTCCCGCTCAGCTGCAAACTCTaGATGGAGGCGTCGGATGTCCTCAAGCGTGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VELLPVPLSCKL*MEASDVLKRGL Trigger: GAGCCCACGCTTGAGGACATCCGACGCCTCCATGCAGAGTTTGCAGCTGAGCGGGACTGGGAGCAGTTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 72 bp | AACTGCTCCCAGTCCCGCTCAGCTGCAAACTCTGCATaGAGGCGTCGGATGTCCTCAAGCGTGGGCTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: NCSQSRSAANSA*RRRMSSSVGSG Trigger: TCCGGAGCCCACGCTTGAGGACATCCGACGCCTCCATGCAGAGTTTGCAGCTGAGCGGGACTGGGAGCAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 72 bp | ACCAAGGCTAGCAGCAGGTTCCGAGGCTGGTGGAACTaGTCCCAGTCCCGCTCAGCTGCAAACTCTGCATGG | + |
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Preference number: 6 (lower is better) Translates to: TKASSRFRGWWN*SQSRSAANSAW Trigger: CCATGCAGAGTTTGCAGCTGAGCGGGACTGGGAGCAGTTCCACCAGCCTCGGAACCTGCTGCTAGCCTTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 72 bp | ACTTCTCCCACCAAGGCTAGCAGCAGGTTCCGAGGCTaGTGGAACTGCTCCCAGTCCCGCTCAGCTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: TSPTKASSRFRG*WNCSQSRSAAN Trigger: GTTTGCAGCTGAGCGGGACTGGGAGCAGTTCCACCAGCCTCGGAACCTGCTGCTAGCCTTGGTGGGAGAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 72 bp | GTAGATGAGGACGTCGCTAAGCTCCTCCTGAAGGGCTaGTCTCTCCTTTGGTGGCCATGCTTGAGGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: VDEDVAKLLLKG*SLLWWPCLRTR Trigger: CCTGGTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCCCTTCAGGAGGAGCTTAGCGACGTCCTCATCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 72 bp | CTCCTCCTGAAGGGCTGCTCTCTCCTTTGGTGGCCATaGTTGAGGACCAGGCTCTGTATCAGACTTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: LLLKGCSLLWWP*LRTRLCIRLPL Trigger: CAGTGGAAGTCTGATACAGAGCCTGGTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCCCTTCAGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS GCA 72 bp | TTTCAGAGATGGTCCCACGGGGCAAGTCAGTGTACTTaGAGGCAGAACCTCGGGACAGGTGGACTGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: FQRWSHGASQCT*RQNLGTGGLGN Trigger: GTTACCCAGTCCACCTGTCCCGAGGTTCTGCCTGCAAGTACACTGACTTGCCCCGTGGGACCATCTCTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CAA 90 bp | GCTAAGCTCCTCCTGAAGGGCTGCTCTCTCCTTTGGTGGCCATGCTaGAGGACCAGGCTCTGTATCAGACTTCCACTGGAAGAGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: AKLLLKGCSLLWWPC*RTRLCIRLPLEEFC Trigger: GCAGAACTCTTCCAGTGGAAGTCTGATACAGAGCCTGGTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCCCTTCAGGAGGAGCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CAA 72 bp | CTCCTGAAGGGCTGCTCTCTCCTTTGGTGGCCATGCTaGAGGACCAGGCTCTGTATCAGACTTCCACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LLKGCSLLWWPC*RTRLCIRLPLE Trigger: TTCCAGTGGAAGTCTGATACAGAGCCTGGTCCTCAAGCATGGCCACCAAAGGAGAGAGCAGCCCTTCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS TCA 72 bp | CGTTGGCGGTTGGTGTCCATTTTGGAGATTACTGCTTaGGGTAAATCCACATGGCAGCGGGCTGCTAATGCT | + |
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Preference number: 6 (lower is better) Translates to: RWRLVSILEITA*GKSTWQRAANA Trigger: AGCATTAGCAGCCCGCTGCCATGTGGATTTACCTCAAGCAGTAATCTCCAAAATGGACACCAACCGCCAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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| CDS CCA 72 bp | AACCTCGGGACAGGTGGACTGGGTAACGTTGGCGGTTaGTGTCCATTTTGGAGATTACTGCTTGAGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: NLGTGGLGNVGG*CPFWRLLLEVN Trigger: ATTTACCTCAAGCAGTAATCTCCAAAATGGACACCAACCGCCAACGTTACCCAGTCCACCTGTCCCGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035276.5 |
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