Pregenerated sensors for DCTN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025410Ensembl transcript IDs: ENSMUST00000026479.11
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGTCCCTCTCCCACAGCAGGCAAAGCACTTACTGGACGGGAACTaGATGTGGCTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: PVPLPQQAKHLLDGN*MWLGPQPHPIRAPS Trigger: GCTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTGCTGTGGGAGAGGGACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR CCA 90 bp | CCTCTCCCACAGCAGGCAAAGCACTTACTGGACGGGAACTGCATGTaGCTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGCTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: PLPQQAKHLLDGNCM*LGPQPHPIRAPSSH Trigger: GTGGGAGCTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTGCTGTGGGAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTTGTCGGGGTGGGCTGGGGCTGTaGGTGACCCTGTGGAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LGPQPHPIRAPSSHSVCRGGLGL*VTLWKG Trigger: ACCCTTCCACAGGGTCACTCACAGCCCCAGCCCACC...CCGACAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACAACCTCATCCCTGTGGAAGGGTCTaGCAAAGTTCAGGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: QAKHLLDGNCMWLGPQPHPCGRV*QSSGAR Trigger: CCTTGCCCCTGAACTTTGTCAGACCCTTCCACAGGG...ATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACAACCTCATACATGCAAGAACCCTTaGCCTTGTCAGGTGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QAKHLLDGNCMWLGPQPHTCKNP*PCQVGW Trigger: CCAGCCCACCTGACAAGGGCAAGGGTTCTTGCATGT...ATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGAGACAGTTGTACAGTGTTAGACTCGGCCAGAGACAGACGTTAGAGGACCTTGCCCTTGTCAGGTaGGCTGGGGCTGTGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GQRQLYSVRLGQRQTLEDLALVR*AGAVSD Trigger: GTCACTCACAGCCCCAGCCCACCTGACAAGGGCAAG...GTCCTCTAACGTCTGTCTCTGGCCGAGTCTAACACTGTACAACTGTCTCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR CAA 90 bp | CAGCAGAGACTCCACGGTACAACAGCATTTAATGGTCAGAGACAGTaGTACAGTGTTAGACTCGGCCAGAGACAGACGTTAGAGGACGGG | + |
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Preference number: 2 (lower is better) Translates to: QQRLHGTTAFNGQRQ*YSVRLGQRQTLEDG Trigger: CCCGTCCTCTAACGTCTGTCTCTGGCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTGGAGTCTCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR GCA 72 bp | TCCCACTCTGTTTGTCGGGAGGGTGTGTACCCCACATaGAAGAACCCTTGCCCTTGTCAGGTGGGCTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: SHSVCREGVYPT*KNPCPCQVGWG Trigger: GCCCCAGCCCACCTGACAAGGGCAAGGGTTCTTGCATGTGGGGTACACACCCTCCCGACAAACAGAGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR CCA 72 bp | ATCCAGTCCCTCTCCCACAGCAGGCAAAGCACTTACTaGACGGGAACTGCATGTGGCTGGGCCCACAACCTC | + |
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Preference number: 3 (lower is better) Translates to: IQSLSHSRQSTY*TGTACGWAHNL Trigger: GAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTGCTGTGGGAGAGGGACTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR TCA 72 bp | CAAGAACCCTTGCCCTTGTCAGGTGGGCTGGGGCTGTaGGTGACCCTGTGGAAGGGTCTGACAAAGTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: QEPLPLSGGLGL*VTLWKGLTKFR Trigger: CCTGAACTTTGTCAGACCCTTCCACAGGGTCACTCACAGCCCCAGCCCACCTGACAAGGGCAAGGGTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR CCA 72 bp | CAGCAGGCAAAGCACTTACTGGACGGGAACTGCATGTaGCTGGGCCCACAACCTCATCCAATAAGAGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: QQAKHLLDGNCM*LGPQPHPIRAP Trigger: GGGGGCTCTTATTGGATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR TCA 90 bp | CAGCAGGCAAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACAACCTCCAGCACCACAGGGGTaGGCTTCTCCTCGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QQAKHLLDGNCMWLGPQPPAPQG*ASPRWL Trigger: CAGCCACCGAGGAGAAGCTCACCCCTGTGGTGCTGG...AGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR TCA 90 bp | AGAGCCCCCAGCTCCCACTCTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGCTGGGTCGGCAAGGTTaGTTGCAGCATCTGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RAPSSHSVCREGVYPTCKLGRQG*LQHLVP Trigger: TGGGACCAGATGCTGCAATCAACCTTGCCGACCCAG...CTTGCATGTGGGGTACACACCCTCCCGACAAACAGAGTGGGAGCTGGGGGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | CAACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTTGTCGGGAGGGTGTGTGGGAAGCCACCAGCTaGTGCTTCAGGGCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QPHPIRAPSSHSVCREGVWEATS*CFRAAS Trigger: GCTGGCTGCCCTGAAGCAGCAGCTGGTGGCTTCCCA...CACACCCTCCCGACAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR TCA 90 bp | CAGCAGGCAAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACAACCTAGTGGAGTTCATAGGTaGCCAGGCTGCTGTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QQAKHLLDGNCMWLGPQPSGVHR*PGCCLG Trigger: CCCCAGACAGCAGCCTGGTCACCTATGAACTCCACT...AGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR TCA 90 bp | GTGGCTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTTGGTCCTGCTCAGGCCGTaGGTGGAGTTCATAGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: VAGPTTSSNKSPQLPLCLVLLRP*VEFIGD Trigger: GTCACCTATGAACTCCACTCACGGCCTGAGCAGGAC...CAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | CTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTTGTCGGGGTCACATCGGACAGTaGCCTCCAGCTCTGTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LGPQPHPIRAPSSHSVCRGHIGQ*PPALSD Trigger: GTCTGACAGAGCTGGAGGCCACTGTCCGATGTGACC...CCGACAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCTCCCACTCTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGAACCAGCCGAGCCTCTACTTaGTCCAGAACTGCAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PPAPTLFVGRVCTPHARTSRAST*SRTARS Trigger: GGACCTTGCAGTTCTGGACCAAGTAGAGGCTCGGCT...GGTTCTTGCATGTGGGGTACACACCCTCCCGACAAACAGAGTGGGAGCTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | AAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACAACCTCATCCAATAGAGGGTGGAGGCGACTaGGCTCCAGCGCTGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: KHLLDGNCMWLGPQPHPIEGGGD*APALDG Trigger: ACCATCCAGCGCTGGAGCCCAGTCGCCTCCACCCTC...TATTGGATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | CAACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTTGTCGGGAGGGTGTGGGCTCCAGCGCTGGATaGTCTCATAGAGCTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: QPHPIRAPSSHSVCREGVGSSAG*SHRAGA Trigger: TGCACCAGCTCTATGAGACCATCCAGCGCTGGAGCC...CACACCCTCCCGACAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | GAGCCCCCAGCTCCCACTCTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGAAGTCGTTGGTACTTCTaGTGCGGTGTCTCCTTCACT | + |
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Preference number: 4 (lower is better) Translates to: EPPAPTLFVGRVCTPHARSRWYF*CGVSFT Trigger: AGTGAAGGAGACACCGCAGCAGAAGTACCAACGACT...TCTTGCATGTGGGGTACACACCCTCCCGACAAACAGAGTGGGAGCTGGGGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | GTGGCTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTTGCTTGTTCTGAGTGTCTaGGTCCTCCACGGATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VAGPTTSSNKSPQLPLCLLVLSV*VLHGCL Trigger: AAGGCATCCGTGGAGGACGCAGACACTCAGAACAAG...CAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCTCCCACTCTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGAACCTCATGCAGTAGTCGTTaGTACTTCTGCTGCGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PPAPTLFVGRVCTPHARTSCSSR*YFCCGV Trigger: GACACCGCAGCAGAAGTACCAACGACTACTGCATGA...GGTTCTTGCATGTGGGGTACACACCCTCCCGACAAACAGAGTGGGAGCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | TCGGGAGGGTGTGTACCCCACATGCAAGAACCCTTGCCCTTGTCAGGTGGGCTGGTTGATTGCAGCATCTaGTCCCAGAAGCTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SGGCVPHMQEPLPLSGGLVDCSI*SQKLLQ Trigger: CTGGAGAAGCTTCTGGGACCAGATGCTGCAATCAAC...CAGCCCACCTGACAAGGGCAAGGGTTCTTGCATGTGGGGTACACACCCTCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| 3UTR CAA 72 bp | ACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTaGTCGGGAGGGTGTGTACCCCACATGCAAGAACCC | + |
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Preference number: 4 (lower is better) Translates to: TSSNKSPQLPLC*SGGCVPHMQEP Trigger: GGGTTCTTGCATGTGGGGTACACACCCTCCCGACAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR TCA 90 bp | ACGTCTCTCAGTGCTGCCTCTCCGAAATCCAGGAACACAGCAGAGACTCCACGGTGTAGCCTTACCCCCTaGACTGCCTTTGCTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: TSLSAASPKSRNTAETPRCSLTP*TAFAAL Trigger: AAGAGCAGCAAAGGCAGTTCAGGGGGTAAGGCTACA...CCGTGGAGTCTCTGCTGTGTTCCTGGATTTCGGAGAGGCAGCACTGAGAGACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | CTGTTAACGTTATGCACGTCTCTCAGTGCTGCCTCTCCGAAATCCAGGAACACAGAAGCCACCAGCTGCTaGTTCAGGGCAGCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLTLCTSLSAASPKSRNTEATSC*FRAASC Trigger: GCAGCTGGCTGCCCTGAAGCAGCAGCTGGTGGCTTC...TGTGTTCCTGGATTTCGGAGAGGCAGCACTGAGAGACGTGCATAACGTTAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | CTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGAACCCTTGCCCTTGTCAGGGTCGGCAAGGTTGATTaGAGCATCTGGTCCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LFVGRVCTPHARTLALVRVGKVD*SIWSQK Trigger: CTTCTGGGACCAGATGCTGCAATCAACCTTGCCGAC...CCTGACAAGGGCAAGGGTTCTTGCATGTGGGGTACACACCCTCCCGACAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | CTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTTGTCGGTCCACGGATGCCTTGTaGTTAGCAATCTCATTCACC | + |
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Preference number: 4 (lower is better) Translates to: LGPQPHPIRAPSSHSVCRSTDAL*LAISFT Trigger: GGTGAATGAGATTGCTAAGCACAAGGCATCCGTGGA...CCGACAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | CAGGCAAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACAACCTCATCCTCAGGTAGGTCGCTaGTTTCATAAACGTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QAKHLLDGNCMWLGPQPHPQVGR*FHKRLA Trigger: AGCCAGACGTTTATGAAACCAGCGACCTACCTGAGG...ATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | GAGCCCCCAGCTCCCACTCTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGACATATCCTGTCCTCTTaGTCTTTCCAATGCGATCTG | + |
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Preference number: 4 (lower is better) Translates to: EPPAPTLFVGRVCTPHARHILSS*SFQCDL Trigger: CAGATCGCATTGGAAAGACCAAGAGGACAGGATATG...TCTTGCATGTGGGGTACACACCCTCCCGACAAACAGAGTGGGAGCTGGGGGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | TCCCACAGCAGGCAAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACCGAGTTCTGCAACTTTaGCAGCTTGAGAGAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: SHSRQSTYWTGTACGWAHRVLQL*QLERTC Trigger: ACAAGTTCTCTCAAGCTGCCAAAGTTGCAGAACTCG...GTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTGCTGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | CAACAGCATTTAATGGTCAGAGACAGTTGTACAGTGTTAGACTCGGCCAGAGACCCAGTTCAGGGAGGGTaGAGGCGACTGGGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QQHLMVRDSCTVLDSARDPVQGG*RRLGSS Trigger: GCTGGAGCCCAGTCGCCTCCACCCTCCCTGAACTGG...GTCTCTGGCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | GCACGTCTCTCAGTGCTGCCTCTCCGAAATCCAGGAACACAGCAGAGACTCCACAGTTCCCCTCAACTGTaGCCAAGTTTTCACGCATCG | + |
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Preference number: 4 (lower is better) Translates to: ARLSVLPLRNPGTQQRLHSSPQL*PSFHAS Trigger: CGATGCGTGAAAACTTGGCCACAGTTGAGGGGAACT...GTGGAGTCTCTGCTGTGTTCCTGGATTTCGGAGAGGCAGCACTGAGAGACGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | GCACGTCTCTCAGTGCTGCCTCTCCGAAATCCAGGAACACAGCAGAGACTCCACTCCGAGCATCAATGCTaGCAAAGTTCCCCTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: ARLSVLPLRNPGTQQRLHSEHQC*QSSPQL Trigger: CAGTTGAGGGGAACTTTGCCAGCATTGATGCTCGGA...GTGGAGTCTCTGCTGTGTTCCTGGATTTCGGAGAGGCAGCACTGAGAGACGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR TCA 90 bp | CACTCTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGAACCCTTGCCCTTGTGCAACTTTGGCAGCTTaGGAGAACTTGTCCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HSVCREGVYPTCKNPCPCATLAA*ENLSCS Trigger: TGAGCAGGACAAGTTCTCTCAAGCTGCCAAAGTTGC...ACAAGGGCAAGGGTTCTTGCATGTGGGGTACACACCCTCCCGACAAACAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | TCCCACAGCAGGCAAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACTCTTGGTCTTTCCAATaGGATCTGAGAAATCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SHSRQSTYWTGTACGWAHSWSFQ*DLRNQA Trigger: GGCTTGATTTCTCAGATCGCATTGGAAAGACCAAGA...GTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTGCTGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | CTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGAACCCTTGCCCTTGTCAGGGCACTCACTTTGGCTTaGAACAGTTCTACCGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LFVGRVCTPHARTLALVRALTLA*NSSTVS Trigger: GGAAACGGTAGAACTGTTGCAAGCCAAAGTGAGTGC...CCTGACAAGGGCAAGGGTTCTTGCATGTGGGGTACACACCCTCCCGACAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | GCACGTCTCTCAGTGCTGCCTCTCCGAAATCCAGGAACACAGCAGAGACTCCACTCATCCGAGCATCAATaGTGGCAAAGTTCCCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: ARLSVLPLRNPGTQQRLHSSEHQ*WQSSPQ Trigger: TTGAGGGGAACTTTGCCAGCATTGATGCTCGGATGA...GTGGAGTCTCTGCTGTGTTCCTGGATTTCGGAGAGGCAGCACTGAGAGACGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | CTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGAACCCTTGCCCTTGTCAGGAGCTCTTGGACTTCATaGAGTAGTCGTTGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: LFVGRVCTPHARTLALVRSSWTS*SSRWYF Trigger: GAAGTACCAACGACTACTGCATGAAGTCCAAGAGCT...CCTGACAAGGGCAAGGGTTCTTGCATGTGGGGTACACACCCTCCCGACAAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | CACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTGTTAGACTCGGCTTCAGGGCAGCCAGCTaGTTAGCCAGCACCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: HGTTAFNGQRQLYSVRLGFRAAS*LASTTG Trigger: CCCTGTGGTGCTGGCTAAGCAGCTGGCTGCCCTGAA...GCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | TCTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGAACCCTTGCCCTTGTCAGATCGTTGTCTGCACCTaGGTCAGGAGAGCAGTATTA | + |
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Preference number: 4 (lower is better) Translates to: SVCREGVYPTCKNPCPCQIVVCT*VRRAVL Trigger: TAATACTGCTCTCCTGACCCAGGTGCAGACAACGAT...CTGACAAGGGCAAGGGTTCTTGCATGTGGGGTACACACCCTCCCGACAAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR TCA 90 bp | CAGCAGAGACTCCACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTCTTCTCCTCGGTGGCTaGCTCCTTCACTGTCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: QQRLHGTTAFNGQRQLYSLLLGG*LLHCRL Trigger: AAGACGACAGTGAAGGAGTCAGCCACCGAGGAGAAG...ACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTGGAGTCTCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR TCA 90 bp | ACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTGTTAGACTCGGCCGCAGAAAGGGGATTCTaGGCATCCTGGTCACATCGG | + |
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Preference number: 4 (lower is better) Translates to: TVQQHLMVRDSCTVLDSAAERGF*ASWSHR Trigger: CCGATGTGACCAGGATGCTCAGAATCCCCTTTCTGC...GGCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR TCA 90 bp | ATAGTGTGGCTTAGACTGTTAACGTTATGCACGTCTCTCAGTGCTGCCTCTCCGAAGTGTGTCAGGAGCTaGCCAAACTGCATAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: IVWLRLLTLCTSLSAASPKCVRS*PNCIAC Trigger: GCAAGCTATGCAGTTTGGTCAGCTCCTGACACACTT...CGGAGAGGCAGCACTGAGAGACGTGCATAACGTTAACAGTCTAAGCCACACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR GCA 90 bp | ACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTGTTAGACTCGGCCCGTTGGTACTTCTGCTaGGGTGTCTCCTTCACTCCC | + |
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Preference number: 4 (lower is better) Translates to: TVQQHLMVRDSCTVLDSARWYFC*GVSFTP Trigger: GGGAGTGAAGGAGACACCGCAGCAGAAGTACCAACG...GGCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS-3UTR CCA 90 bp | AAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACAACCTCATCCAATTCAGTTGTCAGCTCTTaGACTTCATGCAGTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KALTGRELHVAGPTTSSNSVVSS*TSCSSR Trigger: ACGACTACTGCATGAAGTCCAAGAGCTGACAACTGA...ATTGGATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR TCA 90 bp | TCCGAAATCCAGGAACACAGCAGAGACTCCACGGTACAACAGCATTTAATGGTCGCATCAAACTCTGCTTaGTCATCCTCAGGTAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SEIQEHSRDSTVQQHLMVASNSA*SSSGRS Trigger: CGACCTACCTGAGGATGATCAAGCAGAGTTTGATGC...GACCATTAAATGCTGTTGTACCGTGGAGTCTCTGCTGTGTTCCTGGATTTCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR TCA 90 bp | GGTCAGAGACAGTTGTACAGTGTTAGACTCGGCCAGAGACAGACGTTAGAGGACCTTTCCAATGCGATCTaGGAAATCAAGCCCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQRQLYSVRLGQRQTLEDLSNAI*EIKPLC Trigger: ACAAAGGGGCTTGATTTCTCAGATCGCATTGGAAAG...GTCCTCTAACGTCTGTCTCTGGCCGAGTCTAACACTGTACAACTGTCTCTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAGACTCCACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTCCAGGGCACTCACTTTaGCTTGCAACAGTTCTACCG | + |
|
Preference number: 4 (lower is better) Translates to: QQRLHGTTAFNGQRQLYSPGHSL*LATVLP Trigger: CGGTAGAACTGTTGCAAGCCAAAGTGAGTGCCCTGG...ACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTGGAGTCTCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR GCA 90 bp | GACTCCACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTGTTAGACGCTTGCTCATGCAGCTaGTTGATGGTGACAAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DSTVQQHLMVRDSCTVLDACSCS*LMVTSR Trigger: GCGACTTGTCACCATCAAGCAGCTGCATGAGCAAGC...GTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTGGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAGACTCCACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTTTAGTTGCTTCCAGCTaGAGCAGTAAGCGCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQRLHGTTAFNGQRQLYSLVASS*SSKRLA Trigger: AGCTAAGCGCTTACTGCTGCAGCTGGAAGCAACTAA...ACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTGGAGTCTCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR GCA 90 bp | CACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTGTTAGACTCGGCACGCTTCTCGAGTTCTaGAACTTTGGCAGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGTTAFNGQRQLYSVRLGTLLEF*NFGSLR Trigger: TCTCAAGCTGCCAAAGTTGCAGAACTCGAGAAGCGT...GCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR GCA 90 bp | ACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTGTTAGACTCGGCCTGCATAGCTTGCTCATaGAGCTGCTTGATGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TVQQHLMVRDSCTVLDSACIACS*SCLMVT Trigger: TGTCACCATCAAGCAGCTGCATGAGCAAGCTATGCA...GGCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CCA 90 bp | CACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTGTTAGACTCGGCGGTTTCATAAACGTCTaGCTCATTCCTGGCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HGTTAFNGQRQLYSVRLGGFINV*LIPGNA Trigger: GGCATTGCCAGGAATGAGCCAGACGTTTATGAAACC...GCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| 3UTR CAA 72 bp | CTCCACGGTACAACAGCATTTAATGGTCAGAGACAGTaGTACAGTGTTAGACTCGGCCAGAGACAGACGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LHGTTAFNGQRQ*YSVRLGQRQTL Trigger: TAACGTCTGTCTCTGGCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 90 bp | GTACCAGTTCAGGGAGGGTGGAGGCGACTGGGCTCCAGCGCTGGATaGTCTCATAGAGCTGGTGCACCTTGTTCTGAGTGTCTGCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPVQGGWRRLGSSAG*SHRAGAPCSECLRP Trigger: AGGACGCAGACACTCAGAACAAGGTGCACCAGCTCTATGAGACCATCCAGCGCTGGAGCCCAGTCGCCTCCACCCTCCCTGAACTGGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 90 bp | GATGGTGACAAGTCGCTGTACCAGTTCAGGGAGGGTGGAGGCGACTaGGCTCCAGCGCTGGATGGTCTCATAGAGCTGGTGCACCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DGDKSLYQFREGGGD*APALDGLIELVHLV Trigger: AACAAGGTGCACCAGCTCTATGAGACCATCCAGCGCTGGAGCCCAGTCGCCTCCACCCTCCCTGAACTGGTACAGCGACTTGTCACCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTTGTCGGTCCAGGGCACTCACTTaGGCTTGCAACAGTTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: LGPQPHPIRAPSSHSVCRSRALT*ACNSST Trigger: GGTAGAACTGTTGCAAGCCAAAGTGAGTGCCCTGGA...CCGACAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGCTCCCACTCTGTTTGTCGGAGTTTTCACGCATCGTaGTCTGCACCTGGGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGPQPHPIRAPSSHSVCRSFHAS*SAPGSG Trigger: TCCTGACCCAGGTGCAGACAACGATGCGTGAAAACT...CCGACAAACAGAGTGGGAGCTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 90 bp | GACCTGCAGAAAGGGGATTCTGAGCATCCTGGTCACATCGGACAGTaGCCTCCAGCTCTGTCAGACGCTTCTCGAGTTCTGCAACTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLQKGDSEHPGHIGQ*PPALSDASRVLQLW Trigger: CCAAAGTTGCAGAACTCGAGAAGCGTCTGACAGAGCTGGAGGCCACTGTCCGATGTGACCAGGATGCTCAGAATCCCCTTTCTGCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CAA 90 bp | GAGCCCCCAGCTCCCACTCTGTTTGTCGGGAGGGTGTGTACCCCACATGCAAGATCTTCTCCACCTCAGTaGTCAGCTCTTGGACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EPPAPTLFVGRVCTPHARSSPPQ*SALGLH Trigger: ATGAAGTCCAAGAGCTGACAACTGAGGTGGAGAAGA...TCTTGCATGTGGGGTACACACCCTCCCGACAAACAGAGTGGGAGCTGGGGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CAA 90 bp | GGACGGGAACTGCATGTGGCTGGGCCCACAACCTCATCCAATAAGAGCCCCCAGTCCTTCACTGTCGTCTaGATCTTCTCCACCTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRELHVAGPTTSSNKSPQSFTVV*IFSTSV Trigger: AACTGAGGTGGAGAAGATCAAGACGACAGTGAAGGA...CTGGGGGCTCTTATTGGATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CAA 90 bp | CAGCAGGCAAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACAACCTTGCAACTTTGGCAGCTaGAGAGAACTTGTCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QQAKHLLDGNCMWLGPQPCNFGS*RELVLL Trigger: GAGCAGGACAAGTTCTCTCAAGCTGCCAAAGTTGCA...AGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTTGCCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS GCA 90 bp | CTTTCCCAGGACACTCTGAAGCCGAGCCTCTACTTGGTCCAGAACTaGAAGGTCCAGGGCACTCACTTTGGCTTGCAACAGTTCTACCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSQDTLKPSLYLVQN*KVQGTHFGLQQFYR Trigger: ACGGTAGAACTGTTGCAAGCCAAAGTGAGTGCCCTGGACCTTGCAGTTCTGGACCAAGTAGAGGCTCGGCTTCAGAGTGTCCTGGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 90 bp | GCCTCTTCATCCGAGCATCAATGCTGGCAAAGTTCCCCTCAACTGTaGCCAAGTTTTCACGCATCGTTGTCTGCACCTGGGTCAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASSSEHQCWQSSPQL*PSFHASLSAPGSGE Trigger: CTCTCCTGACCCAGGTGCAGACAACGATGCGTGAAAACTTGGCCACAGTTGAGGGGAACTTTGCCAGCATTGATGCTCGGATGAAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CAA 90 bp | AAAGCACTTACTGGACGGGAACTGCATGTGGCTGGGCCCACAACCTCATCCAATAAGCCGAGCCTCTACTaGGTCCAGAACTGCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KALTGRELHVAGPTTSSNKPSLY*VQNCKV Trigger: GACCTTGCAGTTCTGGACCAAGTAGAGGCTCGGCTT...ATTGGATGAGGTTGTGGGCCCAGCCACATGCAGTTCCCGTCCAGTAAGTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS GCA 90 bp | GCGCTGGATGGTCTCATAGAGCTGGTGCACCTTGTTCTGAGTGTCTaGGTCCTCCACGGATGCCTTGTGCTTAGCAATCTCATTCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALDGLIELVHLVLSV*VLHGCLVLSNLIHL Trigger: AAGGTGAATGAGATTGCTAAGCACAAGGCATCCGTGGAGGACGCAGACACTCAGAACAAGGTGCACCAGCTCTATGAGACCATCCAGCGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 90 bp | TTCTCCACCTCAGTTGTCAGCTCTTGGACTTCATGCAGTAGTCGTTaGTACTTCTGCTGCGGTGTCTCCTTCACTCCCAGACCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSTSVVSSWTSCSSR*YFCCGVSFTPRPSP Trigger: TGGAGAGGGTCTGGGAGTGAAGGAGACACCGCAGCAGAAGTACCAACGACTACTGCATGAAGTCCAAGAGCTGACAACTGAGGTGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS TCA 90 bp | GAACTGGCCATCATCTGCTGGGTGGTATCCAAGTGTGTCAGGAGCTaGCCAAACTGCATAGCTTGCTCATGCAGCTGCTTGATGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ELAIICWVVSKCVRS*PNCIACSCSCLMVT Trigger: TGTCACCATCAAGCAGCTGCATGAGCAAGCTATGCAGTTTGGTCAGCTCCTGACACACTTGGATACCACCCAGCAGATGATGGCCAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS GCA 90 bp | GTCGTCTTGATCTTCTCCACCTCAGTTGTCAGCTCTTGGACTTCATaGAGTAGTCGTTGGTACTTCTGCTGCGGTGTCTCCTTCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVLIFSTSVVSSWTS*SSRWYFCCGVSFTP Trigger: GGGAGTGAAGGAGACACCGCAGCAGAAGTACCAACGACTACTGCATGAAGTCCAAGAGCTGACAACTGAGGTGGAGAAGATCAAGACGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS GCA 90 bp | TCTACTTGGTCCAGAACTGCAAGGTCCAGGGCACTCACTTTGGCTTaGAACAGTTCTACCGTTTCCATAAGGCAGGCTCCCTGTAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: STWSRTARSRALTLA*NSSTVSIRQAPCRP Trigger: AGGTCTACAGGGAGCCTGCCTTATGGAAACGGTAGAACTGTTGCAAGCCAAAGTGAGTGCCCTGGACCTTGCAGTTCTGGACCAAGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS GCA 90 bp | ATAGAGCTGGTGCACCTTGTTCTGAGTGTCTGCGTCCTCCACGGATaGCTTGTGCTTAGCAATCTCATTCACCTTTCCCAGGACACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IELVHLVLSVCVLHG*LVLSNLIHLSQDTL Trigger: CAGAGTGTCCTGGGAAAGGTGAATGAGATTGCTAAGCACAAGGCATCCGTGGAGGACGCAGACACTCAGAACAAGGTGCACCAGCTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS GCA 90 bp | GCAAAGTTCCCCTCAACTGTGGCCAAGTTTTCACGCATCGTTGTCTaGACCTGGGTCAGGAGAGCAGTATTATCCTTAAGGGAACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKFPSTVAKFSRIVV*TWVRRAVLSLRELA Trigger: GGCCAGTTCCCTTAAGGATAATACTGCTCTCCTGACCCAGGTGCAGACAACGATGCGTGAAAACTTGGCCACAGTTGAGGGGAACTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 90 bp | GTTCCTCCGCATCAAACTCTGCTTGATCATCCTCAGGTAGGTCGCTaGTTTCATAAACGTCTGGCTCATTCCTGGCAATGCCGGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VPPHQTLLDHPQVGR*FHKRLAHSWQCRGD Trigger: ATCTCCCCGGCATTGCCAGGAATGAGCCAGACGTTTATGAAACCAGCGACCTACCTGAGGATGATCAAGCAGAGTTTGATGCGGAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS GCA 90 bp | TCAGTTGTCAGCTCTTGGACTTCATGCAGTAGTCGTTGGTACTTCTaGTGCGGTGTCTCCTTCACTCCCAGACCCTCTCCAAGCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVVSSWTSCSSRWYF*CGVSFTPRPSPSIS Trigger: TGAAATGCTTGGAGAGGGTCTGGGAGTGAAGGAGACACCGCAGCAGAAGTACCAACGACTACTGCATGAAGTCCAAGAGCTGACAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CAA 90 bp | CACGGTACAACAGCATTTAATGGTCAGAGACAGTTGTACAGTGTTAGACTCGGCTCTGGGTCGGCAAGGTaGATTGCAGCATCTGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HGTTAFNGQRQLYSVRLGSGSAR*IAASGP Trigger: GGGACCAGATGCTGCAATCAACCTTGCCGACCCAGA...GCCGAGTCTAACACTGTACAACTGTCTCTGACCATTAAATGCTGTTGTACCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS-3UTR CAA 90 bp | CTGTTAACGTTATGCACGTCTCTCAGTGCTGCCTCTCCGAAATCCAGGAACACATCATATCCTGTCCTCTaGGTCTTTCCAATGCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: LLTLCTSLSAASPKSRNTSYPVL*VFPMRS Trigger: AGATCGCATTGGAAAGACCAAGAGGACAGGATATGA...TGTGTTCCTGGATTTCGGAGAGGCAGCACTGAGAGACGTGCATAACGTTAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 72 bp | GGCTCCGTCTGGGTCGGCAAGGTTGATTGCAGCATCTaGTCCCAGAAGCTTCTCCAGGTGGGAAGCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSVWVGKVDCSI*SQKLLQVGSHQ Trigger: CTGGTGGCTTCCCACCTGGAGAAGCTTCTGGGACCAGATGCTGCAATCAACCTTGCCGACCCAGACGGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 72 bp | CAGGGAGGGTGGAGGCGACTGGGCTCCAGCGCTGGATaGTCTCATAGAGCTGGTGCACCTTGTTCTGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QGGWRRLGSSAG*SHRAGAPCSEC Trigger: ACACTCAGAACAAGGTGCACCAGCTCTATGAGACCATCCAGCGCTGGAGCCCAGTCGCCTCCACCCTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 72 bp | AAGTCGCTGTACCAGTTCAGGGAGGGTGGAGGCGACTaGGCTCCAGCGCTGGATGGTCTCATAGAGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KSLYQFREGGGD*APALDGLIELV Trigger: CACCAGCTCTATGAGACCATCCAGCGCTGGAGCCCAGTCGCCTCCACCCTCCCTGAACTGGTACAGCGACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS TCA 72 bp | AGGCAGGCTCCCTGTAGACCTGCAGAAAGGGGATTCTaGGCATCCTGGTCACATCGGACAGTGGCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RQAPCRPAERGF*ASWSHRTVASS Trigger: GCTGGAGGCCACTGTCCGATGTGACCAGGATGCTCAGAATCCCCTTTCTGCAGGTCTACAGGGAGCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CAA 90 bp | TGCAGCAGTAAGCGCTTAGCTAGGGCTCCGTCTGGGTCGGCAAGGTaGATTGCAGCATCTGGTCCCAGAAGCTTCTCCAGGTGGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSSKRLARAPSGSAR*IAASGPRSFSRWEA Trigger: GGCTTCCCACCTGGAGAAGCTTCTGGGACCAGATGCTGCAATCAACCTTGCCGACCCAGACGGAGCCCTAGCTAAGCGCTTACTGCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CAA 72 bp | AAGCGCTTAGCTAGGGCTCCGTCTGGGTCGGCAAGGTaGATTGCAGCATCTGGTCCCAGAAGCTTCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KRLARAPSGSAR*IAASGPRSFSR Trigger: CCTGGAGAAGCTTCTGGGACCAGATGCTGCAATCAACCTTGCCGACCCAGACGGAGCCCTAGCTAAGCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS TCA 72 bp | TTTGGCAGCTTGAGAGAACTTGTCCTGCTCAGGCCGTaGGTGGAGTTCATAGGTGACCAGGCTGCTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FGSLRELVLLRP*VEFIGDQAAVW Trigger: CCAGACAGCAGCCTGGTCACCTATGAACTCCACTCACGGCCTGAGCAGGACAAGTTCTCTCAAGCTGCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS GCA 72 bp | GACACTCTGAAGCCGAGCCTCTACTTGGTCCAGAACTaGAAGGTCCAGGGCACTCACTTTGGCTTGCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: DTLKPSLYLVQN*KVQGTHFGLQQ Trigger: CTGTTGCAAGCCAAAGTGAGTGCCCTGGACCTTGCAGTTCTGGACCAAGTAGAGGCTCGGCTTCAGAGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 72 bp | AAAGGGGATTCTGAGCATCCTGGTCACATCGGACAGTaGCCTCCAGCTCTGTCAGACGCTTCTCGAGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KGDSEHPGHIGQ*PPALSDASRVL Trigger: CAGAACTCGAGAAGCGTCTGACAGAGCTGGAGGCCACTGTCCGATGTGACCAGGATGCTCAGAATCCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CAA 72 bp | CACCTTTCCCAGGACACTCTGAAGCCGAGCCTCTACTaGGTCCAGAACTGCAAGGTCCAGGGCACTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: HLSQDTLKPSLY*VQNCKVQGTHF Trigger: AAAGTGAGTGCCCTGGACCTTGCAGTTCTGGACCAAGTAGAGGCTCGGCTTCAGAGTGTCCTGGGAAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CAA 90 bp | CGAGCCTCTACTTGGTCCAGAACTGCAAGGTCCAGGGCACTCACTTaGGCTTGCAACAGTTCTACCGTTTCCATAAGGCAGGCTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RASTWSRTARSRALT*ACNSSTVSIRQAPC Trigger: ACAGGGAGCCTGCCTTATGGAAACGGTAGAACTGTTGCAAGCCAAAGTGAGTGCCCTGGACCTTGCAGTTCTGGACCAAGTAGAGGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CCA 72 bp | TCCGAGCATCAATGCTGGCAAAGTTCCCCTCAACTGTaGCCAAGTTTTCACGCATCGTTGTCTGCACCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SEHQCWQSSPQL*PSFHASLSAPG Trigger: CCCAGGTGCAGACAACGATGCGTGAAAACTTGGCCACAGTTGAGGGGAACTTTGCCAGCATTGATGCTCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CAA 72 bp | GTCCAGAACTGCAAGGTCCAGGGCACTCACTTTGGCTaGCAACAGTTCTACCGTTTCCATAAGGCAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VQNCKVQGTHFG*QQFYRFHKAGS Trigger: GGAGCCTGCCTTATGGAAACGGTAGAACTGTTGCAAGCCAAAGTGAGTGCCCTGGACCTTGCAGTTCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS GCA 72 bp | GTGCACCTTGTTCTGAGTGTCTGCGTCCTCCACGGATaGCTTGTGCTTAGCAATCTCATTCACCTTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VHLVLSVCVLHG*LVLSNLIHLSQ Trigger: CTGGGAAAGGTGAATGAGATTGCTAAGCACAAGGCATCCGTGGAGGACGCAGACACTCAGAACAAGGTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
||
| CDS CAA 90 bp | CTGGGTGGTATCCAAGTGTGTCAGGAGCTGACCAAACTGCATAGCTaGCTCATGCAGCTGCTTGATGGTGACAAGTCGCTGTACCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGGIQVCQELTKLHS*LMQLLDGDKSLYQF Trigger: GAACTGGTACAGCGACTTGTCACCATCAAGCAGCTGCATGAGCAAGCTATGCAGTTTGGTCAGCTCCTGACACACTTGGATACCACCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS TCA 72 bp | ATCATCTGCTGGGTGGTATCCAAGTGTGTCAGGAGCTaGCCAAACTGCATAGCTTGCTCATGCAGCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: IICWVVSKCVRS*PNCIACSCSCL Trigger: CAAGCAGCTGCATGAGCAAGCTATGCAGTTTGGTCAGCTCCTGACACACTTGGATACCACCCAGCAGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS GCA 72 bp | ATCTTCTCCACCTCAGTTGTCAGCTCTTGGACTTCATaGAGTAGTCGTTGGTACTTCTGCTGCGGTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IFSTSVVSSWTS*SSRWYFCCGVS Trigger: GGAGACACCGCAGCAGAAGTACCAACGACTACTGCATGAAGTCCAAGAGCTGACAACTGAGGTGGAGAAGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS GCA 72 bp | CCCTCAACTGTGGCCAAGTTTTCACGCATCGTTGTCTaGACCTGGGTCAGGAGAGCAGTATTATCCTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: PSTVAKFSRIVV*TWVRRAVLSLR Trigger: CCTTAAGGATAATACTGCTCTCCTGACCCAGGTGCAGACAACGATGCGTGAAAACTTGGCCACAGTTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS CAA 72 bp | ACTTGGTCCAGAACTGCAAGGTCCAGGGCACTCACTTaGGCTTGCAACAGTTCTACCGTTTCCATAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TWSRTARSRALT*ACNSSTVSIRQ Trigger: CTGCCTTATGGAAACGGTAGAACTGTTGCAAGCCAAAGTGAGTGCCCTGGACCTTGCAGTTCTGGACCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS CAA 72 bp | AGTTCCCCTCAACTGTGGCCAAGTTTTCACGCATCGTaGTCTGCACCTGGGTCAGGAGAGCAGTATTATCCT | + |
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Preference number: 6 (lower is better) Translates to: SSPQLWPSFHAS*SAPGSGEQYYP Trigger: AGGATAATACTGCTCTCCTGACCCAGGTGCAGACAACGATGCGTGAAAACTTGGCCACAGTTGAGGGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS CCA 72 bp | GTCGTCTTGATCTTCTCCACCTCAGTTGTCAGCTCTTaGACTTCATGCAGTAGTCGTTGGTACTTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VVLIFSTSVVSS*TSCSSRWYFCC Trigger: GCAGCAGAAGTACCAACGACTACTGCATGAAGTCCAAGAGCTGACAACTGAGGTGGAGAAGATCAAGACGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS GCA 72 bp | CTCCAGACTCATATCCTGTCCTCTTGGTCTTTCCAATaGGATCTGAGAAATCAAGCCCCTTTGTTCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: LQTHILSSWSFQ*DLRNQAPLFPL Trigger: GAGTGGGAACAAAGGGGCTTGATTTCTCAGATCGCATTGGAAAGACCAAGAGGACAGGATATGAGTCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS CCA 72 bp | CATCAAACTCTGCTTGATCATCCTCAGGTAGGTCGCTaGTTTCATAAACGTCTGGCTCATTCCTGGCAATGC | + |
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Preference number: 6 (lower is better) Translates to: HQTLLDHPQVGR*FHKRLAHSWQC Trigger: GCATTGCCAGGAATGAGCCAGACGTTTATGAAACCAGCGACCTACCTGAGGATGATCAAGCAGAGTTTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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| CDS CCA 72 bp | GCATTTCATAGTCTCCAGACTCATATCCTGTCCTCTTaGTCTTTCCAATGCGATCTGAGAAATCAAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: AFHSLQTHILSS*SFQCDLRNQAP Trigger: AGGGGCTTGATTTCTCAGATCGCATTGGAAAGACCAAGAGGACAGGATATGAGTCTGGAGACTATGAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026479.11 |
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