Pregenerated sensors for DCTD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031562Ensembl transcript IDs: ENSMUST00000033966.13, ENSMUST00000033966.14, ENSMUST00000170263.10, ENSMUST00000170263.9, ENSMUST00000174278.8, ENSMUST00000174278.9, ENSMUST00000174379.3, ENSMUST00000174818.8, ENSMUST00000174818.9
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGAGGCTAATGTGGGAGCGGAGGGTGCTGGCTAATCCAGAGATCTaGAGCACCAGGCCTACTCGAGAAAGGCTCTGCCATCACCTTAGC | + |
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Preference number: 1 (lower is better) Translates to: KRLMWERRVLANPEI*STRPTRERLCHHLS Trigger: GCTAAGGTGATGGCAGAGCCTTTCTCGAGTAGGCCTGGTGCTGCAGATCTCTGGATTAGCCAGCACCCTCCGCTCCCACATTAGCCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
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| 3UTR CCA 90 bp | CTCTCTGGTTATAGGGTGCCCTTGGAAATGAACCATGTTGGCATGTaGAGCAGGAGTGACATGTGTCCACACAGCAGGAGACACAGGATG | + |
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Preference number: 1 (lower is better) Translates to: LSGYRVPLEMNHVGM*SRSDMCPHSRRHRM Trigger: CATCCTGTGTCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACATGCCAACATGGTTCATTTCCAAGGGCACCCTATAACCAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR CCA 90 bp | TGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGCACGCACGTGGTaGGGTGTCATCTTCTTCTGGGGCTTTAACGAGACGAAACTCACT | + |
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Preference number: 1 (lower is better) Translates to: CVCMCVCVCVCARTW*GVIFFWGFNETKLT Trigger: AGTGAGTTTCGTCTCGTTAAAGCCCCAGAAGAAGATGACACCCCACCACGTGCGTGCACACACACACACACACACACACATACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
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| 3UTR TCA 90 bp | GGACAGGAATTAATGTGCTCTCTGGTTATAGGGTGCCCTTGGAAATaGACCATGTTGGCATGTGGAGCAGGAGTGACATGTGTCCACACA | + |
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Preference number: 1 (lower is better) Translates to: GQELMCSLVIGCPWK*TMLACGAGVTCVHT Trigger: TGTGTGGACACATGTCACTCCTGCTCCACATGCCAACATGGTTCATTTCCAAGGGCACCCTATAACCAGAGAGCACATTAATTCCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR CCA 90 bp | GCCAACTTAAACAGGAGCCTGGCAGCTGTCGTCTCCTCGCTGTCGTaGTATTTATCCGACATGAAGATAACCTCTTTTATACCTGAACAG | + |
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Preference number: 1 (lower is better) Translates to: ANLNRSLAAVVSSLS*YLSDMKITSFIPEQ Trigger: CTGTTCAGGTATAAAAGAGGTTATCTTCATGTCGGATAAATACCACGACAGCGAGGAGACGACAGCTGCCAGGCTCCTGTTTAAGTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCACACAGCAGGAGACACAGGATGGGGGAACGTCTCTCATCACCCATCCATAAGAGCTGACACTCTCTaGCAGACGGGCTCGGCGGAA | + |
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Preference number: 2 (lower is better) Translates to: VHTAGDTGWGNVSHHPSIRADTL*QTGSAE Trigger: TTCCGCCGAGCCCGTCTGCCAGAGAGTGTCAGCTCT...TATGGATGGGTGATGAGAGACGTTCCCCCATCCTGTGTCTCCTGCTGTGTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCACACAGCAGGAGACACAGGATGGGGGAACGTCTCTCATCACCCATCCATACTCCTCAACCTCATGTaGCCAGGTGAGAGGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VHTAGDTGWGNVSHHPSILLNLM*PGERSP Trigger: AGGGGACCTCTCACCTGGTCACATGAGGTTGAGGAG...TATGGATGGGTGATGAGAGACGTTCCCCCATCCTGTGTCTCCTGCTGTGTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCACACAGCAGGAGACACAGGATGGGGGAACGTCTCTCATCACCCATCCATAAAACACAGTACGCAGTaGGGCACCCCCACCCACAAT | + |
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Preference number: 2 (lower is better) Translates to: VHTAGDTGWGNVSHHPSIKHSTQ*GTPTHN Trigger: ATTGTGGGTGGGGGTGCCCCACTGCGTACTGTGTTT...TATGGATGGGTGATGAGAGACGTTCCCCCATCCTGTGTCTCCTGCTGTGTGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGCCTGGTCTAGGGGGAGTGATAGACTGTCTCCTCTAGGAACTACTTATGCCCTCAAGAGGCTAATGTaGGAGCGGAGGGTGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SAWSRGSDRLSPLGTTYALKRLM*ERRVLA Trigger: AGCCAGCACCCTCCGCTCCCACATTAGCCTCTTGAG...GGCATAAGTAGTTCCTAGAGGAGACAGTCTATCACTCCCCCTAGACCAGGCGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | CCGTGGGACTTCAAGATGAAAGGCTTGGGGAGCCCCTTGTGTGTGTGTGTATGTTGTGCACGCACGTGGTaGGGTGTCATCTTCTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PWDFKMKGLGSPLCVCVCCARTW*GVIFFW Trigger: CCAGAAGAAGATGACACCCCACCACGTGCGTGCACA...ACATACACACACACACAAGGGGCTCCCCAAGCCTTTCATCTTGAAGTCCCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174278.8 ENSMUST00000174818.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGAGCAGGAGTGACATGTGTCCACACAGCAGGAGACACAGGATGGGGGAACAACTACATCAACAGCTaGAACAGATGGAGCTCCACG | + |
|
Preference number: 2 (lower is better) Translates to: CGAGVTCVHTAGDTGWGNNYINS*NRWSST Trigger: CGTGGAGCTCCATCTGTTTCAGCTGTTGATGTAGTT...GTTCCCCCATCCTGTGTCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGACTTCAAGATGAAAGGCTTGGGGAGCCCCTTGTGTGTGTGTGTATGTGTACTGTACTGATCATCTaGCAGGACACTGGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VGLQDERLGEPLVCVCMCTVLII*QDTGPS Trigger: GGAGGGCCCAGTGTCCTGGCAGATGATCAGTACAGT...ACACATACACACACACACAAGGGGCTCCCCAAGCCTTTCATCTTGAAGTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCACACAGCAGGAGACACAGGATGGGGGAACGTCTCTCATCACCCATCCATAACTCGAGAAAGGCTCTaGCATCACCTTAGCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: VHTAGDTGWGNVSHHPSITRERL*HHLSPV Trigger: AACTGGGCTAAGGTGATGGCAGAGCCTTTCTCGAGT...TATGGATGGGTGATGAGAGACGTTCCCCCATCCTGTGTCTCCTGCTGTGTGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | CATTTGGGCCAGATGTTCACCTCAGTGTGCCTGTTCATCCCTGCTAAGAACGAGTGTGCACGCACGTGGTaGGGTGTCATCTTCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: HLGQMFTSVCLFIPAKNECARTW*GVIFFW Trigger: CCAGAAGAAGATGACACCCCACCACGTGCGTGCACA...CTCGTTCTTAGCAGGGATGAACAGGCACACTGAGGTGAACATCTGGCCCAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGAGCAGGAGTGACATGTGTCCACACAGCAGGAGACACAGGATGGGGGAACATTACCCTTTTCCAGTaGGCTTACAGTCGATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: CGAGVTCVHTAGDTGWGNITLFQ*AYSRCP Trigger: TGGACATCGACTGTAAGCTCACTGGAAAAGGGTAAT...GTTCCCCCATCCTGTGTCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCACACAGCAGGAGACACAGGATGGGGGAACGTCTCTCATCACCCATCCATAAACCATGTTGGCATGTaGAGCAGGAGTGACATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VHTAGDTGWGNVSHHPSINHVGM*SRSDMC Trigger: ACACATGTCACTCCTGCTCCACATGCCAACATGGTT...TATGGATGGGTGATGAGAGACGTTCCCCCATCCTGTGTCTCCTGCTGTGTGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR CAA 90 bp | GGTGAGAGGTCCCCTCAACTCTACAGCAGGTGTGTTCATGTAGCTTaGTTCGGTCCTATTTGTTTTCCCAAGGGCGTGACAGGGTATGCT | + |
|
Preference number: 2 (lower is better) Translates to: GERSPQLYSRCVHVA*FGPICFPKGVTGYA Trigger: AGCATACCCTGTCACGCCCTTGGGAAAACAAATAGGACCGAACAAAGCTACATGAACACACCTGCTGTAGAGTTGAGGGGACCTCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAACCATGTTGGCATGTGGAGCAGGAGTGACATGTGTCCACACAGCAGGAGAGCTCCACGTGACGGGTaGGAAGATTCCAAGTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: MNHVGMWSRSDMCPHSRRAPRDG*EDSKFY Trigger: ATAAAACTTGGAATCTTCTCACCCGTCACGTGGAGC...TCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACATGCCAACATGGTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCAACTCTACAGCAGGTGTGTTCATGTAGCTTTGTTCGGTCCTATTTGTTTTAGAGCTGACACTCTCTaGCAGACGGGCTCGGCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PQLYSRCVHVALFGPICFRADTL*QTGSAE Trigger: TTCCGCCGAGCCCGTCTGCCAGAGAGTGTCAGCTCT...AAAACAAATAGGACCGAACAAAGCTACATGAACACACCTGCTGTAGAGTTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACTTCAAGATGAAAGGCTTGGGGAGCCCCTTGTGTGTGTGTGTATGTGTGCTGTCGAAATATGGTaGATGACAGAGCTGACACTC | + |
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Preference number: 2 (lower is better) Translates to: VGLQDERLGEPLVCVCMCAVEIW*MTELTL Trigger: GAGTGTCAGCTCTGTCATCCACCATATTTCGACAGC...ACACATACACACACACACAAGGGGCTCCCCAAGCCTTTCATCTTGAAGTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACTTCAAGATGAAAGGCTTGGGGAGCCCCTTGTGTGTGTGTGTATGTGTAGGGTATGCTTCATTTaGGCCAGATGTTCACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VGLQDERLGEPLVCVCMCRVCFI*ARCSPQ Trigger: CTGAGGTGAACATCTGGCCCAAATGAAGCATACCCT...ACACATACACACACACACAAGGGGCTCCCCAAGCCTTTCATCTTGAAGTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTATGCTTCATTTGGGCCAGATGTTCACCTCAGTGTGCCTGTTCATCCCTAGGGTATGCTTCATTTaGGCCAGATGTTCACCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: QGMLHLGQMFTSVCLFIPRVCFI*ARCSPQ Trigger: CTGAGGTGAACATCTGGCCCAAATGAAGCATACCCT...AGGGATGAACAGGCACACTGAGGTGAACATCTGGCCCAAATGAAGCATACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCATTTGGGCCAGATGTTCACCTCAGTGTGCCTGTTCATCCCTGCTAAGAACAACTACATCAACAGCTaGAACAGATGGAGCTCCACG | + |
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Preference number: 2 (lower is better) Translates to: LHLGQMFTSVCLFIPAKNNYINS*NRWSST Trigger: CGTGGAGCTCCATCTGTTTCAGCTGTTGATGTAGTT...GTTCTTAGCAGGGATGAACAGGCACACTGAGGTGAACATCTGGCCCAAATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCCCACAGCCCTCTTATAGGACAGGAATTAATGTGCTCTCTGGTTATAGGACTGTACTGATCATCTaGCAGGACACTGGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SFPQPSYRTGINVLSGYRTVLII*QDTGPS Trigger: GGAGGGCCCAGTGTCCTGGCAGATGATCAGTACAGT...CCTATAACCAGAGAGCACATTAATTCCTGTCCTATAAGAGGGCTGTGGGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTAGTTTCCAAACCAAACTACATCAACAGCTGAAACAGATGGAGCTCCACGCTAATCCAGAGATCTaGAGCACCAGGCCTACTCGA | + |
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Preference number: 2 (lower is better) Translates to: SLSFQTKLHQQLKQMELHANPEI*STRPTR Trigger: TCGAGTAGGCCTGGTGCTGCAGATCTCTGGATTAGC...GTGGAGCTCCATCTGTTTCAGCTGTTGATGTAGTTTGGTTTGGAAACTAAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
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| 3UTR-3UTR CCA 90 bp | CGGATAAATTTAACAGTGCTATGTGACCAACAAACCAAGGCTAAGAGGCTGGAAGCAGGAGACACAGGATaGGGGAACGTCTCTCATCAC | + |
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Preference number: 2 (lower is better) Translates to: RINLTVLCDQQTKAKRLEAGDTG*GNVSHH Trigger: GTGATGAGAGACGTTCCCCCATCCTGTGTCTCCTGC...TTCCAGCCTCTTAGCCTTGGTTTGTTGGTCACATAGCACTGTTAAATTTATCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR CAA 90 bp | TCTTATAGGACAGGAATTAATGTGCTCTCTGGTTATAGGGTGCCCTaGGAAATGAACCATGTTGGCATGTGGAGCAGGAGTGACATGTGT | + |
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Preference number: 2 (lower is better) Translates to: SYRTGINVLSGYRVP*EMNHVGMWSRSDMC Trigger: ACACATGTCACTCCTGCTCCACATGCCAACATGGTTCATTTCCAAGGGCACCCTATAACCAGAGAGCACATTAATTCCTGTCCTATAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCAACTCTACAGCAGGTGTGTTCATGTAGCTTTGTTCGGTCCTATTTGTTTTGCTCCACGTGACGGGTaGGAAGATTCCAAGTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: PQLYSRCVHVALFGPICFAPRDG*EDSKFY Trigger: ATAAAACTTGGAATCTTCTCACCCGTCACGTGGAGC...AAAACAAATAGGACCGAACAAAGCTACATGAACACACCTGCTGTAGAGTTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR TCA 72 bp | CATCTGCCAGGACACTGGGCCCTCCTCAACCTCATGTaGCCAGGTGAGAGGTCCCCTCAACTCTACAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: HLPGHWALLNLM*PGERSPQLYSR Trigger: CCTGCTGTAGAGTTGAGGGGACCTCTCACCTGGTCACATGAGGTTGAGGAGGGCCCAGTGTCCTGGCAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR GCA 72 bp | ATGTGGGAGCGGAGGGTGCTGGCTAATCCAGAGATCTaGAGCACCAGGCCTACTCGAGAAAGGCTCTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: MWERRVLANPEI*STRPTRERLCH Trigger: ATGGCAGAGCCTTTCTCGAGTAGGCCTGGTGCTGCAGATCTCTGGATTAGCCAGCACCCTCCGCTCCCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
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| 3UTR CCA 72 bp | GCTGGAACCGCAGGGGTCCCCTACCCTCCAGAGGGATaGTATGCTACTGCTCTGTGTAAGGCAGGAAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: AGTAGVPYPPEG*YATALCKAGKC Trigger: ACACTTTCCTGCCTTACACAGAGCAGTAGCATACCATCCCTCTGGAGGGTAGGGGACCCCTGCGGTTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR CCA 72 bp | CAGTGCTATGTGACCAACAAACCAAGGCTAAGAGGCTaGAACCGCAGGGGTCCCCTACCCTCCAGAGGGATG | + |
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Preference number: 3 (lower is better) Translates to: QCYVTNKPRLRG*NRRGPLPSRGM Trigger: CATCCCTCTGGAGGGTAGGGGACCCCTGCGGTTCCAGCCTCTTAGCCTTGGTTTGTTGGTCACATAGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR CCA 72 bp | TGTCGAAATATGGTGGATGACAGAGCTGACACTCTCTaGCAGACGGGCTCGGCGGAAGGGGAGAGACCTTCA | + |
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Preference number: 3 (lower is better) Translates to: CRNMVDDRADTL*QTGSAEGERPS Trigger: TGAAGGTCTCTCCCCTTCCGCCGAGCCCGTCTGCCAGAGAGTGTCAGCTCTGTCATCCACCATATTTCGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR TCA 72 bp | AAGGCAGGAAAGTGTGACTTGAGGGGGACACTGTACTaGTCATCTGCCAGGACACTGGGCCCTCCTCAACCT | + |
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Preference number: 3 (lower is better) Translates to: KAGKCDLRGTLY*SSARTLGPPQP Trigger: AGGTTGAGGAGGGCCCAGTGTCCTGGCAGATGATCAGTACAGTGTCCCCCTCAAGTCACACTTTCCTGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR CCA 72 bp | TCGGCGGAAGGGGAGAGACCTTCACTCCAGCTCCTGTaGGCAGGTCCCTTAGTTTCCAAACCAAACTACATC | + |
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Preference number: 3 (lower is better) Translates to: SAEGERPSLQLL*AGPLVSKPNYI Trigger: GATGTAGTTTGGTTTGGAAACTAAGGGACCTGCCCACAGGAGCTGGAGTGAAGGTCTCTCCCCTTCCGCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CAA 90 bp | ATGAACCATGTTGGCATGTGGAGCAGGAGTGACATGTGTCCACACAGCAGGAGAGGCTTGGGGAGCCCCTaGTGTGTGTGTGTATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: MNHVGMWSRSDMCPHSRRGLGSP*CVCVCV Trigger: CACACATACACACACACACAAGGGGCTCCCCAAGCC...TCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACATGCCAACATGGTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGGACTTCAAGATGAAAGGCTTGGGGAGCCCCTTGTGTGTGTGTGTATGTGTGGCTTGGGGAGCCCCTaGTGTGTGTGTGTATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: VGLQDERLGEPLVCVCMCGLGSP*CVCVCV Trigger: CACACATACACACACACACAAGGGGCTCCCCAAGCC...ACACATACACACACACACAAGGGGCTCCCCAAGCCTTTCATCTTGAAGTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174278.8 ENSMUST00000174818.8 |
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| 3UTR CCA 72 bp | GCCTATGAAGCTGAAGGCACAAATGAGGATCTGGCATaGACCACCTCCAGGTACACAGTTTCCCACAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: AYEAEGTNEDLA*TTSRYTVSHSP Trigger: AGGGCTGTGGGAAACTGTGTACCTGGAGGTGGTCCATGCCAGATCCTCATTTGTGCCTTCAGCTTCATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR TCA 72 bp | CTTGGAAATGAACCATGTTGGCATGTGGAGCAGGAGTaGCATGTGTCCACACAGCAGGAGACACAGGATGGG | + |
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Preference number: 3 (lower is better) Translates to: LGNEPCWHVEQE*HVSTQQETQDG Trigger: CCCATCCTGTGTCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACATGCCAACATGGTTCATTTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR GCA 72 bp | TCCAGTGAGCTTACAGTCGATGTCCAGTCACTAAAATaGTCATCTGCCATTTCCCAGGACAGCAGAGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: SSELTVDVQSLK*SSAISQDSRGG Trigger: GCCCCCTCTGCTGTCCTGGGAAATGGCAGATGAGCATTTTAGTGACTGGACATCGACTGTAAGCTCACTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
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| 3UTR CCA 72 bp | TTGTTTTCCCAAGGGCGTGACAGGGTATGCTTCATTTaGGCCAGATGTTCACCTCAGTGTGCCTGTTCATCC | + |
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Preference number: 3 (lower is better) Translates to: LFSQGRDRVCFI*ARCSPQCACSS Trigger: GGATGAACAGGCACACTGAGGTGAACATCTGGCCCAAATGAAGCATACCCTGTCACGCCCTTGGGAAAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR CCA 72 bp | TATAGGGTGCCCTTGGAAATGAACCATGTTGGCATGTaGAGCAGGAGTGACATGTGTCCACACAGCAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: YRVPLEMNHVGM*SRSDMCPHSRR Trigger: TCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACATGCCAACATGGTTCATTTCCAAGGGCACCCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CAA 90 bp | CTTAGTTTCCAAACCAAACTACATCAACAGCTGAAACAGATGGAGCTCCACGTGGGCTTGGGGAGCCCCTaGTGTGTGTGTGTATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LSFQTKLHQQLKQMELHVGLGSP*CVCVCV Trigger: CACACATACACACACACACAAGGGGCTCCCCAAGCC...CACGTGGAGCTCCATCTGTTTCAGCTGTTGATGTAGTTTGGTTTGGAAACTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCATTTGGGCCAGATGTTCACCTCAGTGTGCCTGTTCATCCCTGCTAAGAACCAGGGTATGCTTCATTaGGGCCAGATGTTCACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHLGQMFTSVCLFIPAKNQGMLH*GQMFTS Trigger: TGAGGTGAACATCTGGCCCAAATGAAGCATACCCTG...GTTCTTAGCAGGGATGAACAGGCACACTGAGGTGAACATCTGGCCCAAATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGAGCAGGAGTGACATGTGTCCACACAGCAGGAGACACAGGATGGGGGAACTCAAACAGTCGAGCCTaGGTCCAATTAACAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CGAGVTCVHTAGDTGWGNSNSRA*VQLTSF Trigger: AAAACTTGTTAATTGGACCAAGGCTCGACTGTTTGA...GTTCCCCCATCCTGTGTCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGAGCAGGAGTGACATGTGTCCACACAGCAGGAGACACAGGATGGGGGAACAAGTCAATGACAATCTaGCTGTACTTCGGTGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: CGAGVTCVHTAGDTGWGNKSMTI*LYFGVN Trigger: ATTCACACCGAAGTACAGCAAGATTGTCATTGACTT...GTTCCCCCATCCTGTGTCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTGGAAATGAACCATGTTGGCATGTGGAGCAGGAGTGACATGTGTCCACACACGAGAAGCAATTATTaGTATGTCCTCCTACCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: PLEMNHVGMWSRSDMCPHTRSNY*YVLLPR Trigger: ACGGGGTAGGAGGACATACAAATAATTGCTTCTCGT...GTGTGGACACATGTCACTCCTGCTCCACATGCCAACATGGTTCATTTCCAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGAGCAGGAGTGACATGTGTCCACACAGCAGGAGACACAGGATGGGGGAACTGTGTTCATGTAGCTTaGTTCGGTCCTATTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CGAGVTCVHTAGDTGWGNCVHVA*FGPICF Trigger: AAAACAAATAGGACCGAACAAAGCTACATGAACACA...GTTCCCCCATCCTGTGTCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
||
| 3UTR GCA 72 bp | GCTTACAGTCGATGTCCAGTCACTAAAATGCTCATCTaGCATTTCCCAGGACAGCAGAGGGGGCTGTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: AYSRCPVTKMLI*HFPGQQRGLYL Trigger: TAAATACAGCCCCCTCTGCTGTCCTGGGAAATGGCAGATGAGCATTTTAGTGACTGGACATCGACTGTAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
||
| 3UTR TCA 72 bp | TTAATGTGCTCTCTGGTTATAGGGTGCCCTTGGAAATaGACCATGTTGGCATGTGGAGCAGGAGTGACATGT | + |
|
Preference number: 3 (lower is better) Translates to: LMCSLVIGCPWK*TMLACGAGVTC Trigger: ACATGTCACTCCTGCTCCACATGCCAACATGGTTCATTTCCAAGGGCACCCTATAACCAGAGAGCACATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
||
| 3UTR GCA 72 bp | GGTATGCTTCATTTGGGCCAGATGTTCACCTCAGTGTaGCTGTTCATCCCTGCTAAGAACGAGAAGCAATTA | + |
|
Preference number: 3 (lower is better) Translates to: GMLHLGQMFTSV*LFIPAKNEKQL Trigger: TAATTGCTTCTCGTTCTTAGCAGGGATGAACAGGCACACTGAGGTGAACATCTGGCCCAAATGAAGCATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
||
| 3UTR CCA 72 bp | AACAGGAGCCTGGCAGCTGTCGTCTCCTCGCTGTCGTaGTATTTATCCGACATGAAGATAACCTCTTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: NRSLAAVVSSLS*YLSDMKITSFI Trigger: TATAAAAGAGGTTATCTTCATGTCGGATAAATACCACGACAGCGAGGAGACGACAGCTGCCAGGCTCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAACCATGTTGGCATGTGGAGCAGGAGTGACATGTGTCCACACAGCAGGAGATGTGTTCATGTAGCTTaGTTCGGTCCTATTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: MNHVGMWSRSDMCPHSRRCVHVA*FGPICF Trigger: AAAACAAATAGGACCGAACAAAGCTACATGAACACA...TCTCCTGCTGTGTGGACACATGTCACTCCTGCTCCACATGCCAACATGGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAACTCTACAGCAGGTGTGTTCATGTAGCTTTGTTCGGTCCTATTTGTTTTACGAGAAGCAATTATTaGTATGTCCTCCTACCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: PQLYSRCVHVALFGPICFTRSNY*YVLLPR Trigger: ACGGGGTAGGAGGACATACAAATAATTGCTTCTCGT...AAAACAAATAGGACCGAACAAAGCTACATGAACACACCTGCTGTAGAGTTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTTAGTTTCCAAACCAAACTACATCAACAGCTGAAACAGATGGAGCTCCACTGTGTTCATGTAGCTTaGTTCGGTCCTATTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLSFQTKLHQQLKQMELHCVHVA*FGPICF Trigger: AAAACAAATAGGACCGAACAAAGCTACATGAACACA...GTGGAGCTCCATCTGTTTCAGCTGTTGATGTAGTTTGGTTTGGAAACTAAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
||
| 3UTR CAA 72 bp | GGCAGCATGAACCTGAGAGTGAGGAGTCCCCAGGCCTaGTCCCGAGGGCTGCTCTGTGTGGGCTCTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: GSMNLRVRSPQA*SRGLLCVGSVL Trigger: GAGTACAGAGCCCACACAGAGCAGCCCTCGGGACAAGGCCTGGGGACTCCTCACTCTCAGGTTCATGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
||
| 3UTR CAA 72 bp | GCCTGTTCATCCCTGCTAAGAACGAGAAGCAATTATTaGTATGTCCTCCTACCCCGTGTAGCAGCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACSSLLRTRSNY*YVLLPRVAARS Trigger: GCTCCTTGCTGCTACACGGGGTAGGAGGACATACAAATAATTGCTTCTCGTTCTTAGCAGGGATGAACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.13 ENSMUST00000170263.9 ENSMUST00000174818.8 |
||
| 3UTR CAA 72 bp | GGTCGGCTATTGATCGAATCAAAGTCAATGACAATCTaGCTGTACTTCGGTGTGAATTTTCTGAACGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: GRLLIESKSMTI*LYFGVNFLNVT Trigger: GGTTACGTTCAGAAAATTCACACCGAAGTACAGCAAGATTGTCATTGACTTTGATTCGATCAATAGCCGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174818.8 |
||
| CDS GCA 90 bp | CCCACACACTGCTCGCTGCACGCTCCCACTGCCGACCTCTTCATCTaGCTGGATGATGAGTTTAGCACATTCGTTACACGGGAACAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PTHCSLHAPTADLFI*LDDEFSTFVTREQG Trigger: GCCTTGTTCCCGTGTAACGAATGTGCTAAACTCATCATCCAGGCAGATGAAGAGGTCGGCAGTGGGAGCGTGCAGCGAGCAGTGTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174818.9 |
||
| CDS CCA 90 bp | CACACTGCTCGCTGCACGCTCCCACTGCCGACCTCTTCATCTGCCTaGATGATGAGTTTAGCACATTCGTTACACGGGAACAAGGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: HTARCTLPLPTSSSA*MMSLAHSLHGNKAT Trigger: CGTCGCCTTGTTCCCGTGTAACGAATGTGCTAAACTCATCATCCAGGCAGATGAAGAGGTCGGCAGTGGGAGCGTGCAGCGAGCAGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174818.9 |
||
| CDS TCA 90 bp | AATGCAGGCCCCCACCTGGGAACTTGGGTCCTTGCTTCTTTGTGCTaGCAAGAAGGCCACTGCCATGAAATACTCGGGCCATTCCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: NAGPHLGTWVLASLC*QEGHCHEILGPFQI Trigger: TATCTGGAATGGCCCGAGTATTTCATGGCAGTGGCCTTCTTGTCAGCACAAAGAAGCAAGGACCCAAGTTCCCAGGTGGGGGCCTGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CCA 90 bp | GCCAACTTAAACAGGAGCCTGGCAGCTGTCGTCTCCTCGCTGTCGTaGTATTTATCCGACATGAAGATAACCTCTTTTATACCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ANLNRSLAAVVSSLS*YLSDMKITSFIPAW Trigger: CCAGGCAGGTATAAAAGAGGTTATCTTCATGTCGGATAAATACCACGACAGCGAGGAGACGACAGCTGCCAGGCTCCTGTTTAAGTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 |
||
| CDS GCA 90 bp | CCAGCTTATTTTCTGCTGTTCTCCTCCAAGGCAACAGGTCATCACTaGACCCATTTGGCATGCCATTGTACCCGATCCCAACAATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PAYFLLFSSKATGHH*THLACHCTRSQQSC Trigger: ACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGATGACCTGTTGCCTTGGAGGAGAACAGCAGAAAATAAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS GCA 90 bp | CTGTTCTCCTCCAAGGCAACAGGTCATCACTGCACCCATTTGGCATaGCATTGTACCCGATCCCAACAATCTTGTTTTCTGTGTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LFSSKATGHHCTHLA*HCTRSQQSCFLCSQ Trigger: TTGTGAACACAGAAAACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGATGACCTGTTGCCTTGGAGGAGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CCA 90 bp | TTCTGCTGTTCTCCTCCAAGGCAACAGGTCATCACTGCACCCATTTaGCATGCCATTGTACCCGATCCCAACAATCTTGTTTTCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FCCSPPRQQVITAPI*HAIVPDPNNLVFCV Trigger: AACACAGAAAACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGATGACCTGTTGCCTTGGAGGAGAACAGCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS GCA 90 bp | CTCGGCATGGCACACATAAGGATATTTAGTATCCAGCTTATTTTCTaGTGTTCTCCTCCAAGGCAACAGGTCATCACTGCACCCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGMAHIRIFSIQLIF*CSPPRQQVITAPIW Trigger: CCAAATGGGTGCAGTGATGACCTGTTGCCTTGGAGGAGAACAGCAGAAAATAAGCTGGATACTAAATATCCTTATGTGTGCCATGCCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174818.9 |
||
| CDS GCA 90 bp | CAGTCTTGCTTGTCCATAAGGATATTTAGTATCCAGCTTATTTTCTaGTGTTCTCCTCCAAGGCAACAGGTCATCACTGCACCCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSCLSIRIFSIQLIF*CSPPRQQVITAPIW Trigger: CCAAATGGGTGCAGTGATGACCTGTTGCCTTGGAGGAGAACAGCAGAAAATAAGCTGGATACTAAATATCCTTATGGACAAGCAAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174379.3 |
||
| CDS TCA 72 bp | CCCCACCTGGGAACTTGGGTCCTTGCTTCTTTGTGCTaGCAAGAAGGCCACTGCCATGAAATACTCGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PHLGTWVLASLC*QEGHCHEILGP Trigger: TGGCCCGAGTATTTCATGGCAGTGGCCTTCTTGTCAGCACAAAGAAGCAAGGACCCAAGTTCCCAGGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS GCA 72 bp | TGCTCGCTGCACGCTCCCACTGCCGACCTCTTCATCTaGCTGGATGATGAGTTTAGCACATTCGTTACACGG | + |
|
Preference number: 6 (lower is better) Translates to: CSLHAPTADLFI*LDDEFSTFVTR Trigger: CCGTGTAACGAATGTGCTAAACTCATCATCCAGGCAGATGAAGAGGTCGGCAGTGGGAGCGTGCAGCGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174818.9 |
||
| CDS CCA 72 bp | CGCTGCACGCTCCCACTGCCGACCTCTTCATCTGCCTaGATGATGAGTTTAGCACATTCGTTACACGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RCTLPLPTSSSA*MMSLAHSLHGN Trigger: GTTCCCGTGTAACGAATGTGCTAAACTCATCATCCAGGCAGATGAAGAGGTCGGCAGTGGGAGCGTGCAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174818.9 |
||
| CDS CAA 72 bp | TTCACAATGCAGGCCCCCACCTGGGAACTTGGGTCCTaGCTTCTTTGTGCTGACAAGAAGGCCACTGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: FTMQAPTWELGS*LLCADKKATAM Trigger: CATGGCAGTGGCCTTCTTGTCAGCACAAAGAAGCAAGGACCCAAGTTCCCAGGTGGGGGCCTGCATTGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CAA 72 bp | ACGTACATGCTGCAGCCCTTCACATCAGCCGAGTTCTaGTTCATGATGGCGTTCAGCTCGGCATGGCACACA | + |
|
Preference number: 6 (lower is better) Translates to: TYMLQPFTSAEF*FMMAFSSAWHT Trigger: TGTGTGCCATGCCGAGCTGAACGCCATCATGAACAAGAACTCGGCTGATGTGAAGGGCTGCAGCATGTACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174818.9 |
||
| CDS TCA 72 bp | TGCTGCAGCCCTTCACATCAGCCGAGTTCTTGTTCATaGTGGCGTTCAGCTCGGCATGGCACACATAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CCSPSHQPSSCS*WRSARHGTHKD Trigger: ATCCTTATGTGTGCCATGCCGAGCTGAACGCCATCATGAACAAGAACTCGGCTGATGTGAAGGGCTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174818.9 |
||
| CDS CAA 72 bp | TTTCTGTGTTCACAATGCAGGCCCCCACCTGGGAACTaGGGTCCTTGCTTCTTTGTGCTGACAAGAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FLCSQCRPPPGN*GPCFFVLTRRP Trigger: TGGCCTTCTTGTCAGCACAAAGAAGCAAGGACCCAAGTTCCCAGGTGGGGGCCTGCATTGTGAACACAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CAA 90 bp | TCACTGCACCCATTTGGCATGCCATTGTACCCGATCCCAACAATCTaGTTTTCTGTGTTCACAATGCAGGCCCCCACCTGGGAACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLHPFGMPLYPIPTI*FSVFTMQAPTWELG Trigger: CCCAAGTTCCCAGGTGGGGGCCTGCATTGTGAACACAGAAAACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CAA 90 bp | TTTTCTGTGTTCACAATGCAGGCCCCCACCTGGGAACTTGGGTCCTaGCTTCTTTGTGCTGACAAGAAGGCCACTGCCATGAAATACTCG | + |
|
Preference number: 6 (lower is better) Translates to: FSVFTMQAPTWELGS*LLCADKKATAMKYS Trigger: CGAGTATTTCATGGCAGTGGCCTTCTTGTCAGCACAAAGAAGCAAGGACCCAAGTTCCCAGGTGGGGGCCTGCATTGTGAACACAGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS GCA 72 bp | TTTCTGCTGTTCTCCTCCAAGGCAACAGGTCATCACTaGACCCATTTGGCATGCCATTGTACCCGATCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FLLFSSKATGHH*THLACHCTRSQ Trigger: TTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGATGACCTGTTGCCTTGGAGGAGAACAGCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CAA 72 bp | CCATTTGGCATGCCATTGTACCCGATCCCAACAATCTaGTTTTCTGTGTTCACAATGCAGGCCCCCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PFGMPLYPIPTI*FSVFTMQAPTW Trigger: CCAGGTGGGGGCCTGCATTGTGAACACAGAAAACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS TCA 72 bp | CCTTGCTTCTTTGTGCTGACAAGAAGGCCACTGCCATaGAATACTCGGGCCATTCCAGATAGTCATCCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: PCFFVLTRRPLP*NTRAIPDSHPV Trigger: AACGGGATGACTATCTGGAATGGCCCGAGTATTTCATGGCAGTGGCCTTCTTGTCAGCACAAAGAAGCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CCA 72 bp | ATCTTGTTTTCTGTGTTCACAATGCAGGCCCCCACCTaGGAACTTGGGTCCTTGCTTCTTTGTGCTGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: ILFSVFTMQAPT*ELGSLLLCADK Trigger: CTTGTCAGCACAAAGAAGCAAGGACCCAAGTTCCCAGGTGGGGGCCTGCATTGTGAACACAGAAAACAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CCA 72 bp | TCTCCTCCAAGGCAACAGGTCATCACTGCACCCATTTaGCATGCCATTGTACCCGATCCCAACAATCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPPRQQVITAPI*HAIVPDPNNLV Trigger: AACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGATGACCTGTTGCCTTGGAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CAA 72 bp | TTCTCCTCCAAGGCAACAGGTCATCACTGCACCCATTaGGCATGCCATTGTACCCGATCCCAACAATCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSSKATGHHCTH*ACHCTRSQQSC Trigger: ACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGATGACCTGTTGCCTTGGAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS GCA 72 bp | TCCAAGGCAACAGGTCATCACTGCACCCATTTGGCATaGCATTGTACCCGATCCCAACAATCTTGTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SKATGHHCTHLA*HCTRSQQSCFL Trigger: CAGAAAACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGATGACCTGTTGCCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CAA 72 bp | GGCAACAGGTCATCACTGCACCCATTTGGCATGCCATaGTACCCGATCCCAACAATCTTGTTTTCTGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GNRSSLHPFGMP*YPIPTILFSVF Trigger: GAACACAGAAAACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGATGACCTGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS CAA 90 bp | TTTCTGCTGTTCTCCTCCAAGGCAACAGGTCATCACTGCACCCATTaGGCATGCCATTGTACCCGATCCCAACAATCTTGTTTTCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLLFSSKATGHHCTH*ACHCTRSQQSCFLC Trigger: ACACAGAAAACAAGATTGTTGGGATCGGGTACAATGGCATGCCAAATGGGTGCAGTGATGACCTGTTGCCTTGGAGGAGAACAGCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033966.14 ENSMUST00000170263.10 ENSMUST00000174278.9 ENSMUST00000174379.3 ENSMUST00000174818.9 |
||
| CDS GCA 72 bp | TTGTCCATAAGGATATTTAGTATCCAGCTTATTTTCTaGTGTTCTCCTCCAAGGCAACAGGTCATCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSIRIFSIQLIF*CSPPRQQVITA Trigger: TGCAGTGATGACCTGTTGCCTTGGAGGAGAACAGCAGAAAATAAGCTGGATACTAAATATCCTTATGGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174379.3 |
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