Pregenerated sensors for DCSTAMP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022303Ensembl transcript IDs: ENSMUST00000022913.6, ENSMUST00000227368.2, ENSMUST00000227792.2, ENSMUST00000228556.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAAACTCAAACATCTGTAGACCTTCTCAGATAGCCCCCTCTTGTTaGGTAGACAGAAGCAGCAGTTGGCCCAGAAAGAGGGACTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: ANSNICRPSQIAPSC*VDRSSSWPRKRDCV Trigger: AACACAGTCCCTCTTTCTGGGCCAACTGCTGCTTCTGTCTACTCAACAAGAGGGGGCTATCTGAGAAGGTCTACAGATGTTTGAGTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR TCA 90 bp | ACTATTTACCTAGGGGCTATTTGGCATTATGATCGACATGTATCTTaGAGGATCACCAAAGAGAAAGGCAGCCTTGCAAACTCAAACATC | + |
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Preference number: 1 (lower is better) Translates to: TIYLGAIWHYDRHVS*RITKEKGSLANSNI Trigger: GATGTTTGAGTTTGCAAGGCTGCCTTTCTCTTTGGTGATCCTTCAAGATACATGTCGATCATAATGCCAAATAGCCCCTAGGTAAATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAATATCACAGTTGGGAACTCTATTACAGACAGACATGGAGGCAGGGACAGCGACAGAAGCAGCAGTTaGCCCAGAAAGAGGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: INITVGNSITDRHGGRDSDRSSS*PRKRDC Trigger: ACAGTCCCTCTTTCTGGGCCAACTGCTGCTTCTGTC...GCTGTCCCTGCCTCCATGTCTGTCTGTAATAGAGTTCCCAACTGTGATATTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCACCAAAGAGAAAGGCAGCCTTGCAAACTCAAACATCTGTAGACCTTCTCATAGCCCCCTCTTGTTaGGTAGACAGAAGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GSPKRKAALQTQTSVDLLIAPSC*VDRSSS Trigger: ACTGCTGCTTCTGTCTACTCAACAAGAGGGGGCTAT...GAGAAGGTCTACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTTTGGTGATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CCA 90 bp | GGCATTATGATCGACATGTATCTTGAAGGATCACCAAAGAGAAAGGCAGCCTTGGACAGAAGCAGCAGTTaGCCCAGAAAGAGGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: GIMIDMYLEGSPKRKAALDRSSS*PRKRDC Trigger: ACAGTCCCTCTTTCTGGGCCAACTGCTGCTTCTGTC...CAAGGCTGCCTTTCTCTTTGGTGATCCTTCAAGATACATGTCGATCATAATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR GCA 90 bp | AAGACTCCATCAATATCACAGTTGGGAACTCTATTACAGACAGACATGGAGGCAAAGCCTCCCCCAAGATaGACTAACTGGGGACCAAGT | + |
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Preference number: 2 (lower is better) Translates to: KTPSISQLGTLLQTDMEAKPPPR*TNWGPS Trigger: ACTTGGTCCCCAGTTAGTGCATCTTGGGGGAGGCTT...TGCCTCCATGTCTGTCTGTAATAGAGTTCCCAACTGTGATATTGATGGAGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR TCA 90 bp | TGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCCATAGCCCCCTCTTGTTaGGTAGACAGAAGCAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: CTNWGPSFQISKPLEDISIAPSC*VDRSSS Trigger: ACTGCTGCTTCTGTCTACTCAACAAGAGGGGGCTAT...GGAAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATAAAGCCTCCCCCAAGATaGACTAACTGGGGACCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: EGRIYLGLRFQRGKTPSIKPPPR*TNWGPS Trigger: ACTTGGTCCCCAGTTAGTGCATCTTGGGGGAGGCTT...TATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCAGACAGAAGCAGCAGTTaGCCCAGAAAGAGGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: GRIYLGLRFQRGKTPSISDRSSS*PRKRDC Trigger: ACAGTCCCTCTTTCTGGGCCAACTGCTGCTTCTGTC...TGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCCAGCCATCACCATAGCTTTAACTATGACACAGTTTAGATACTGTGTTTTGATAGCCCCCTCTTGTTaGGTAGACAGAAGCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: MPAITIALTMTQFRYCVLIAPSC*VDRSSS Trigger: ACTGCTGCTTCTGTCTACTCAACAAGAGGGGGCTAT...CAAAACACAGTATCTAAACTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCACTTTGTCCAGCAACATaGCACCTTATAAGCCTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: GRIYLGLRFQRGKTPSISLCPAT*HLISLP Trigger: GGGGAGGCTTATAAGGTGTCATGTTGCTGGACAAAG...TGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAATATCACAGTTGGGAACTCTATTACAGACAGACATGGAGGCAGGGACAGCAAATATCTAAGCCTTTaGAGGACATTTCCATGCCAG | + |
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Preference number: 2 (lower is better) Translates to: INITVGNSITDRHGGRDSKYLSL*RTFPCQ Trigger: CTGGCATGGAAATGTCCTCCAAAGGCTTAGATATTT...GCTGTCCCTGCCTCCATGTCTGTCTGTAATAGAGTTCCCAACTGTGATATTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCACAGTTGGGAACTGATCGACATGTATCTTaGAGGATCACCAAAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LGLRFQRGKTPSISQLGTDRHVS*RITKEK Trigger: TTTCTCTTTGGTGATCCTTCAAGATACATGTCGATC...AGTTCCCAACTGTGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCAGATCGACATGTATCTTaGAGGATCACCAAAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GRIYLGLRFQRGKTPSISDRHVS*RITKEK Trigger: TTTCTCTTTGGTGATCCTTCAAGATACATGTCGATC...TGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CCA 90 bp | ATATCTAAGCCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTATACTGTGTTTTGTTTaGAAGACAGACTCTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: ISKPLEDISMPAITIALTILCFV*KTDSET Trigger: AGTTTCAGAGTCTGTCTTCCAAACAAAACACAGTAT...AGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGGCTTAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR TCA 72 bp | AACATCTGTAGACCTTCTCAGATAGCCCCCTCTTGTTaGGTAGACAGAAGCAGCAGTTGGCCCAGAAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: NICRPSQIAPSC*VDRSSSWPRKR Trigger: CCTCTTTCTGGGCCAACTGCTGCTTCTGTCTACTCAACAAGAGGGGGCTATCTGAGAAGGTCTACAGATGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CAA 90 bp | GGCATTATGATCGACATGTATCTTGAAGGATCACCAAAGAGAAAGGCAGCCTTGAGACAGAAGCAGCAGTaGGCCCAGAAAGAGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: GIMIDMYLEGSPKRKAALRQKQQ*AQKEGL Trigger: CAGTCCCTCTTTCTGGGCCAACTGCTGCTTCTGTCT...CAAGGCTGCCTTTCTCTTTGGTGATCCTTCAAGATACATGTCGATCATAATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAATATCACAGTTGGGAACTCTATTACAGACAGACATGGAGGCAGGGACAGCGATAGCCCCCTCTTGTaGAGTAGACAGAAGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: INITVGNSITDRHGGRDSDSPLL*SRQKQQ Trigger: CTGCTGCTTCTGTCTACTCAACAAGAGGGGGCTATC...GCTGTCCCTGCCTCCATGTCTGTCTGTAATAGAGTTCCCAACTGTGATATTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCACAGTTGGGAACTAGACAGAAGCAGCAGTaGGCCCAGAAAGAGGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LGLRFQRGKTPSISQLGTRQKQQ*AQKEGL Trigger: CAGTCCCTCTTTCTGGGCCAACTGCTGCTTCTGTCT...AGTTCCCAACTGTGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCACAGTTGGGAACTGATAGCCCCCTCTTGTaGAGTAGACAGAAGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LGLRFQRGKTPSISQLGTDSPLL*SRQKQQ Trigger: CTGCTGCTTCTGTCTACTCAACAAGAGGGGGCTATC...AGTTCCCAACTGTGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR TCA 72 bp | AAACACTCCTCTGGAGTCACACTTTGTCCAGCAACATaGCACCTTATAAGCCTCCCCCAAGATGCACTAACT | + |
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Preference number: 3 (lower is better) Translates to: KHSSGVTLCPAT*HLISLPQDALT Trigger: AGTTAGTGCATCTTGGGGGAGGCTTATAAGGTGTCATGTTGCTGGACAAAGTGTGACTCCAGAGGAGTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCCAGCCATCACCATAGCTTTAACTATGACACAGTTTAGATACTGTGTTTTGAGACAGAAGCAGCAGTaGGCCCAGAAAGAGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: MPAITIALTMTQFRYCVLRQKQQ*AQKEGL Trigger: CAGTCCCTCTTTCTGGGCCAACTGCTGCTTCTGTCT...CAAAACACAGTATCTAAACTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR CCA 72 bp | GGTTTCAGAGAGGTAAGACTCCATCAATATCACAGTTaGGAACTCTATTACAGACAGACATGGAGGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: GFREVRLHQYHS*ELYYRQTWRQG Trigger: TCCCTGCCTCCATGTCTGTCTGTAATAGAGTTCCCAACTGTGATATTGATGGAGTCTTACCTCTCTGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR TCA 72 bp | CTAGGGGCTATTTGGCATTATGATCGACATGTATCTTaGAGGATCACCAAAGAGAAAGGCAGCCTTGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: LGAIWHYDRHVS*RITKEKGSLAN Trigger: GTTTGCAAGGCTGCCTTTCTCTTTGGTGATCCTTCAAGATACATGTCGATCATAATGCCAAATAGCCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR CCA 72 bp | ATGACACCTTATAAGCCTCCCCCAAGATGCACTAACTaGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: MTPYKPPPRCTN*GPSFQISKPLE Trigger: CTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCATCTTGGGGGAGGCTTATAAGGTGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATACTCTGGAGTCACACTTaGTCCAGCAACATGACACCT | + |
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Preference number: 3 (lower is better) Translates to: EGRIYLGLRFQRGKTPSILWSHT*SSNMTP Trigger: AGGTGTCATGTTGCTGGACAAAGTGTGACTCCAGAG...TATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCACAGTTGGGAACTAAGAGAAAGGCAGCCTaGCAAACTCAAACATCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LGLRFQRGKTPSISQLGTKRKAA*QTQTSV Trigger: TACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTT...AGTTCCCAACTGTGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR-3UTR CAA 90 bp | ATATCTAAGCCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTAAGAGAAAGGCAGCCTaGCAAACTCAAACATCTGTA | + |
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Preference number: 3 (lower is better) Translates to: ISKPLEDISMPAITIALTKRKAA*QTQTSV Trigger: TACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTT...AGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGGCTTAGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR CCA 90 bp | CCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTATGACACAGGAGCAGGGCAACGGGTaGCAGGATCCAGTAAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PLEDISMPAITIALTMTQEQGNG*QDPVKG Trigger: GCCTTTTACTGGATCCTGCCACCCGTTGCCCTGCTC...CTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR TCA 90 bp | GGCCCAGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGCCACGTAGTTTCAAGTaGACTTCCAGCCCTGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: GPERGTVLLIDHLHLQGLPRSFK*TSSPGK Trigger: CTTGCCAGGGCTGGAAGTTCACTTGAAACTACGTGG...CAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCTGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
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| CDS-3UTR CCA 90 bp | AGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCTTCTGAGCAGGGCAACGGGTaGCAGGATCCAGTAAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: RGTVLLIDHLHLQGLSASEQGNG*QDPVKG Trigger: GCCTTTTACTGGATCCTGCCACCCGTTGCCCTGCTC...AGAAGCAGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
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| CDS-3UTR TCA 90 bp | CCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTATGACACAGCCACGTAGTTTCAAGTaGACTTCCAGCCCTGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PLEDISMPAITIALTMTQPRSFK*TSSPGK Trigger: CTTGCCAGGGCTGGAAGTTCACTTGAAACTACGTGG...CTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR GCA 90 bp | GGATCACCAAAGAGAAAGGCAGCCTTGCAAACTCAAACATCTGTAGACCTTCTCAGATCACTACCCCAGTaGCAGCCGCAATCAAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: GSPKRKAALQTQTSVDLLRSLPQ*QPQSKR Trigger: ACGCTTTGATTGCGGCTGGCACTGGGGTAGTGATCT...GAGAAGGTCTACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTTTGGTGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTATGACACAGCAGGGCCGCTGTTGGTaGCTCTCCTTTTCATCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PLEDISMPAITIALTMTQQGRCW*LSFSSN Trigger: GTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTG...CTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR CCA 90 bp | CCAGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCCTCAGGAAAATACTaGTGCCCAAGGTCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PERGTVLLIDHLHLQGLSASGKY*CPRSRA Trigger: GGCTCTGGACCTTGGGCACCAGTATTTTCCTGAGGC...AGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
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| CDS-3UTR CCA 90 bp | TGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCCGAGCAGGGCAACGGGTaGCAGGATCCAGTAAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: CTNWGPSFQISKPLEDISEQGNG*QDPVKG Trigger: GCCTTTTACTGGATCCTGCCACCCGTTGCCCTGCTC...GGAAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR TCA 90 bp | ATCACCAAAGAGAAAGGCAGCCTTGCAAACTCAAACATCTGTAGACCTTCTCAGCCACGTAGTTTCAAGTaGACTTCCAGCCCTGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ITKEKGSLANSNICRPSQPRSFK*TSSPGK Trigger: CTTGCCAGGGCTGGAAGTTCACTTGAAACTACGTGG...CTGAGAAGGTCTACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTTTGGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTATGACACAGTCAGGAAAATACTGGTaGCCAAGGTCCAGAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PLEDISMPAITIALTMTQSGKYW*PRSRAS Trigger: TGAGGCTCTGGACCTTGGGCACCAGTATTTTCCTGA...CTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR GCA 90 bp | ATCAATATCACAGTTGGGAACTCTATTACAGACAGACATGGAGGCAGGGACAGCTCAGGAAAATACTGGTaGCCAAGGTCCAGAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: INITVGNSITDRHGGRDSSGKYW*PRSRAS Trigger: TGAGGCTCTGGACCTTGGGCACCAGTATTTTCCTGA...GCTGTCCCTGCCTCCATGTCTGTCTGTAATAGAGTTCCCAACTGTGATATTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR GCA 90 bp | CCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTATGACACAGGATCCAGTAAAAGGCTaGAGAGAAGAGGCTCACCGA | + |
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Preference number: 4 (lower is better) Translates to: PLEDISMPAITIALTMTQDPVKG*REEAHR Trigger: TCGGTGAGCCTCTTCTCTGCAGCCTTTTACTGGATC...CTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR GCA 90 bp | AGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCTTCTTCAGATCACTACCCCAGTaGCAGCCGCAATCAAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: RDCVAHRSSSFAGIVCFFRSLPQ*QPQSKR Trigger: ACGCTTTGATTGCGGCTGGCACTGGGGTAGTGATCT...GAAGAAGCAGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
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| CDS-3UTR GCA 90 bp | CCAGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTCAGGGCCGCTGTTGGTaGCTCTCCTTTTCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PERGTVLLIDHLHLQGLSQGRCW*LSFSSN Trigger: GTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTG...AGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCACAGTTGGGAACTGCCTCAGGAAAATACTaGTGCCCAAGGTCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLRFQRGKTPSISQLGTASGKY*CPRSRA Trigger: GGCTCTGGACCTTGGGCACCAGTATTTTCCTGAGGC...AGTTCCCAACTGTGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | TGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCCGCCTCAGGAAAATACTaGTGCCCAAGGTCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTNWGPSFQISKPLEDISASGKY*CPRSRA Trigger: GGCTCTGGACCTTGGGCACCAGTATTTTCCTGAGGC...GGAAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | GGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCTTCTTCCTCTCCCTCTCCACTTTaGGGTAGAAGGAGACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GTVLLIDHLHLQGLSASSSPSPL*GRRRLT Trigger: TGTCAGTCTCCTTCTACCCCAAAGTGGAGAGGGAGA...GGAAGAAGCAGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTTCAGGAAAATACTGGTaGCCAAGGTCCAGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PERGTVLLIDHLHLQGLSSGKYW*PRSRAS Trigger: TGAGGCTCTGGACCTTGGGCACCAGTATTTTCCTGA...AGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR CCA 90 bp | GATGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTGCCTCAGGAAAATACTaGTGCCCAAGGTCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DALTGDQVFKYLSLWRTFASGKY*CPRSRA Trigger: GGCTCTGGACCTTGGGCACCAGTATTTTCCTGAGGC...AAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | GGCATTATGATCGACATGTATCTTGAAGGATCACCAAAGAGAAAGGCAGCCTTGCAGACTCCCAAATGCTaGATGAAGTCCAGCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GIMIDMYLEGSPKRKAALQTPKC*MKSSQL Trigger: TAGCTGGCTGGACTTCATCCAGCATTTGGGAGTCTG...CAAGGCTGCCTTTCTCTTTGGTGATCCTTCAAGATACATGTCGATCATAATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCAGAGCAGGGCAACGGGTaGCAGGATCCAGTAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRIYLGLRFQRGKTPSISEQGNG*QDPVKG Trigger: GCCTTTTACTGGATCCTGCCACCCGTTGCCCTGCTC...TGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | GGCATTATGATCGACATGTATCTTGAAGGATCACCAAAGAGAAAGGCAGCCTTGTCTCCCTCTCCACTTTaGGGTAGAAGGAGACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GIMIDMYLEGSPKRKAALSPSPL*GRRRLT Trigger: TGTCAGTCTCCTTCTACCCCAAAGTGGAGAGGGAGA...CAAGGCTGCCTTTCTCTTTGGTGATCCTTCAAGATACATGTCGATCATAATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTATGACACAGTCTCAATGGCTGCTTTaGTCGTTTCTCAAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLEDISMPAITIALTMTQSQWLL*SFLKEL Trigger: AAGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGA...CTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 |
||
| CDS-3UTR GCA 90 bp | GGATCACCAAAGAGAAAGGCAGCCTTGCAAACTCAAACATCTGTAGACCTTCTCTCTTTGCCCTTAGGTTaGAAGTCATGCTGTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSPKRKAALQTQTSVDLLSLPLG*KSCCLG Trigger: TCCTAGACAGCATGACTTGCAACCTAAGGGCAAAGA...GAGAAGGTCTACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTTTGGTGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR GCA 90 bp | GATGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCAGGGCCGCTGTTGGTaGCTCTCCTTTTCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DALTGDQVFKYLSLWRTFQGRCW*LSFSSN Trigger: GTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTG...AAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCGAGACCACCAGAGTCTaGTTCCAAGAAACAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKRDCVAHRSSSFAGIVCETTRV*FQETRS Trigger: TGACCTTGTTTCTTGGAACCAGACTCTGGTGGTCTC...GCAGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR CCA 90 bp | TGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCCTCATGGACGACTCCTTaGGTTCCTTGCTTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CTNWGPSFQISKPLEDISSWTTP*VPCFSP Trigger: TGGAGAGAAGCAAGGAACCCAAGGAGTCGTCCATGA...GGAAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
||
| CDS-3UTR CCA 90 bp | AAGACTCCATCAATATCACAGTTGGGAACTCTATTACAGACAGACATGGAGGCATCTCCCTCTCCACTTTaGGGTAGAAGGAGACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KTPSISQLGTLLQTDMEASPSPL*GRRRLT Trigger: TGTCAGTCTCCTTCTACCCCAAAGTGGAGAGGGAGA...TGCCTCCATGTCTGTCTGTAATAGAGTTCCCAACTGTGATATTGATGGAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 |
||
| CDS-3UTR TCA 90 bp | ATCAATATCACAGTTGGGAACTCTATTACAGACAGACATGGAGGCAGGGACAGCATAGGAAAACACAGGTaGTCATCCAGACAGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: INITVGNSITDRHGGRDSIGKHR*SSRQKR Trigger: TCTCTTCTGTCTGGATGATCACCTGTGTTTTCCTAT...GCTGTCCCTGCCTCCATGTCTGTCTGTAATAGAGTTCCCAACTGTGATATTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR TCA 90 bp | TGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCCTGTTCATGGAGGAGATaGGCCGATACAGCAGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CTNWGPSFQISKPLEDISCSWRR*ADTADS Trigger: ACTATCTGCTGTATCGGCTCATCTCCTCCATGAACA...GGAAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATACCACGTAGTTTCAAGTaGACTTCCAGCCCTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGRIYLGLRFQRGKTPSIPRSFK*TSSPGK Trigger: CTTGCCAGGGCTGGAAGTTCACTTGAAACTACGTGG...TATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTTCTCAATGGCTGCTTTaGTCGTTTCTCAAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PERGTVLLIDHLHLQGLSSQWLL*SFLKEL Trigger: AAGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGA...AGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCTCTTTGCCCTTAGGTTaGAAGTCATGCTGTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRDCVAHRSSSFAGIVCSLPLG*KSCCLG Trigger: TCCTAGACAGCATGACTTGCAACCTAAGGGCAAAGA...GCAGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR GCA 90 bp | ATCACCAAAGAGAAAGGCAGCCTTGCAAACTCAAACATCTGTAGACCTTCTCAGTCTTTGCCCTTAGGTTaGAAGTCATGCTGTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITKEKGSLANSNICRPSQSLPLG*KSCCLG Trigger: TCCTAGACAGCATGACTTGCAACCTAAGGGCAAAGA...CTGAGAAGGTCTACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTTTGGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCACAGGGCCGCTGTTGGTaGCTCTCCTTTTCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRIYLGLRFQRGKTPSISQGRCW*LSFSSN Trigger: GTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTG...TGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| 3UTR CAA 72 bp | ACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTaGGAGGACATTTCCATGCCAGCCATCACCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNWGPSFQISKP*EDISMPAITIA Trigger: AGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR TCA 90 bp | GGCATTATGATCGACATGTATCTTGAAGGATCACCAAAGAGAAAGGCAGCCTTGATAGGAAAACACAGGTaGTCATCCAGACAGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIMIDMYLEGSPKRKAALIGKHR*SSRQKR Trigger: TCTCTTCTGTCTGGATGATCACCTGTGTTTTCCTAT...CAAGGCTGCCTTTCTCTTTGGTGATCCTTCAAGATACATGTCGATCATAATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR TCA 90 bp | CCAGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTATAGGAAAACACAGGTaGTCATCCAGACAGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PERGTVLLIDHLHLQGLSIGKHR*SSRQKR Trigger: TCTCTTCTGTCTGGATGATCACCTGTGTTTTCCTAT...AGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCAGGAAAATACTGGTaGCCAAGGTCCAGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGRIYLGLRFQRGKTPSISGKYW*PRSRAS Trigger: TGAGGCTCTGGACCTTGGGCACCAGTATTTTCCTGA...TATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR GCA 90 bp | TGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCCTCTTTGCCCTTAGGTTaGAAGTCATGCTGTCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CTNWGPSFQISKPLEDISSLPLG*KSCCLG Trigger: TCCTAGACAGCATGACTTGCAACCTAAGGGCAAAGA...GGAAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR GCA 90 bp | GATGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTACTCCTTGGGTTCCTTaGTTCTCTCCACGTAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DALTGDQVFKYLSLWRTFTPWVP*FSPRSF Trigger: GAAACTACGTGGAGAGAAGCAAGGAACCCAAGGAGT...AAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
||
| CDS-3UTR CCA 90 bp | GGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCTTCTTCCAGTCAGCTGCAAAGATaGGACGATGACATATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTVLLIDHLHLQGLSASSSQLQR*DDDIFL Trigger: AAGAAATATGTCATCGTCCCATCTTTGCAGCTGACT...GGAAGAAGCAGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTATGACACAGTTTGCAGGGATTGTCTaGTTCTTCCTAATCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLEDISMPAITIALTMTQFAGIV*FFLIIF Trigger: GAAAATGATTAGGAAGAAGCAGACAATCCCTGCAAA...CTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCAGAGACCACCAGAGTCTaGTTCCAAGAAACAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRIYLGLRFQRGKTPSISETTRV*FQETRS Trigger: TGACCTTGTTTCTTGGAACCAGACTCTGGTGGTCTC...TGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCAGCCATCACCATAGCTTTAACTATGACACAGTTTAGATACTGTGTTTTGGAGACCACCAGAGTCTaGTTCCAAGAAACAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MPAITIALTMTQFRYCVLETTRV*FQETRS Trigger: TGACCTTGTTTCTTGGAACCAGACTCTGGTGGTCTC...CAAAACACAGTATCTAAACTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | GATGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTTTAAAGGCAGAATCATaGACGACTCCTTGGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DALTGDQVFKYLSLWRTFLKAES*TTPWVP Trigger: AGGAACCCAAGGAGTCGTCCATGATTCTGCCTTTAA...AAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGCCATCACCATAGCTTTAACTATGACACAGTTTAGATACTGTGTTTTGTCTCAATGGCTGCTTTaGTCGTTTCTCAAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MPAITIALTMTQFRYCVLSQWLL*SFLKEL Trigger: AAGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGA...CAAAACACAGTATCTAAACTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 |
||
| CDS-3UTR CCA 90 bp | ATATCTAAGCCTTTGGAGGACATTTCCATGCCAGCCATCACCATAGCTTTAACTAGTCAGCTGCAAAGATaGGACGATGACATATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISKPLEDISMPAITIALTSQLQR*DDDIFL Trigger: AAGAAATATGTCATCGTCCCATCTTTGCAGCTGACT...AGTTAAAGCTATGGTGATGGCTGGCATGGAAATGTCCTCCAAAGGCTTAGATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCAATAGGAAAACACAGGTaGTCATCCAGACAGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRIYLGLRFQRGKTPSISIGKHR*SSRQKR Trigger: TCTCTTCTGTCTGGATGATCACCTGTGTTTTCCTAT...TGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR GCA 90 bp | GATGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTTTTGCAGGGATTGTCTaGTTCTTCCTAATCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DALTGDQVFKYLSLWRTFFAGIV*FFLIIF Trigger: GAAAATGATTAGGAAGAAGCAGACAATCCCTGCAAA...AAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCATC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCAAGTCAGCTGCAAAGATaGGACGATGACATATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRIYLGLRFQRGKTPSISSQLQR*DDDIFL Trigger: AAGAAATATGTCATCGTCCCATCTTTGCAGCTGACT...TGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATAAGTCAGCTGCAAAGATaGGACGATGACATATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGRIYLGLRFQRGKTPSISQLQR*DDDIFL Trigger: AAGAAATATGTCATCGTCCCATCTTTGCAGCTGACT...TATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATTTGCAGGGATTGTCTaGTTCTTCCTAATCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGRIYLGLRFQRGKTPSIFAGIV*FFLIIF Trigger: GAAAATGATTAGGAAGAAGCAGACAATCCCTGCAAA...TATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS TCA 90 bp | CTTCCAGCCCTGGCAAGCTTTGGAACTGTTTGTTCATGGAGGAGATaGGCCGATACAGCAGATAGTCCACAGCGGCAAACAGCACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LPALASFGTVCSWRR*ADTADSPQRQTAPT Trigger: TGTGGGTGCTGTTTGCCGCTGTGGACTATCTGCTGTATCGGCTCATCTCCTCCATGAACAAACAGTTCCAAAGCTTGCCAGGGCTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS CCA 90 bp | ACAGACTCCCAAATGCTGGATGAAGTCCAGCCAGCTAGGGCTTCGTaGAAACACATAAGTCCCCCAAAGCCTCAGGAAAATACTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TDSQMLDEVQPARAS*KHISPPKPQENTGA Trigger: GGCACCAGTATTTTCCTGAGGCTTTGGGGGACTTATGTGTTTCCACGAAGCCCTAGCTGGCTGGACTTCATCCAGCATTTGGGAGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS TCA 90 bp | ATATGGTGCAGGACTCCCAGGACTTCTCCTCTAGTGTCATTCATATaGGCCTCCAGGGCATGGCTGGGACTAAAAAGAGAGACCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IWCRTPRTSPLVSFI*ASRAWLGLKRETTR Trigger: TCTGGTGGTCTCTCTTTTTAGTCCCAGCCATGCCCTGGAGGCTCATATGAATGACACTAGAGGAGAAGTCCTGGGAGTCCTGCACCATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS CCA 90 bp | GCCTCCAGGGCATGGCTGGGACTAAAAAGAGAGACCACCAGAGTCTaGTTCCAAGAAACAAGGTCATCAAATAGATTCAGCGGAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASRAWLGLKRETTRV*FQETRSSNRFSGVA Trigger: TGCCACTCCGCTGAATCTATTTGATGACCTTGTTTCTTGGAACCAGACTCTGGTGGTCTCTCTTTTTAGTCCCAGCCATGCCCTGGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CAA 90 bp | GGATCACCAAAGAGAAAGGCAGCCTTGCAAACTCAAACATCTGTAGACCTTCTCGACACAGGGCCGCTGTaGGTGCCTCTCCTTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GSPKRKAALQTQTSVDLLDTGPL*VPLLFI Trigger: GATGAAAAGGAGAGGCACCAACAGCGGCCCTGTGTC...GAGAAGGTCTACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTTTGGTGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS TCA 90 bp | TGGACGACTCCTTGGGTTCCTTGCTTCTCTCCACGTAGTTTCAAGTaGACTTCCAGCCCTGGCAAGCTTTGGAACTGTTTGTTCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WTTPWVPCFSPRSFK*TSSPGKLWNCLFME Trigger: CTCCATGAACAAACAGTTCCAAAGCTTGCCAGGGCTGGAAGTTCACTTGAAACTACGTGGAGAGAAGCAAGGAACCCAAGGAGTCGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
||
| CDS-3UTR CAA 90 bp | AGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCTTCTTCGACACAGGGCCGCTGTaGGTGCCTCTCCTTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RDCVAHRSSSFAGIVCFFDTGPL*VPLLFI Trigger: GATGAAAAGGAGAGGCACCAACAGCGGCCCTGTGTC...GAAGAAGCAGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR CAA 90 bp | GGCATTATGATCGACATGTATCTTGAAGGATCACCAAAGAGAAAGGCAGCCTTGGACACAGGGCCGCTGTaGGTGCCTCTCCTTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GIMIDMYLEGSPKRKAALDTGPL*VPLLFI Trigger: GATGAAAAGGAGAGGCACCAACAGCGGCCCTGTGTC...CAAGGCTGCCTTTCTCTTTGGTGATCCTTCAAGATACATGTCGATCATAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS TCA 90 bp | AAAGTACAGGCTCGGTTTCCCGTCAGCCTCTCTCAATGGCTGCTTTaGTCGTTTCTCAAGGAGCTTCGCATGCAGGTATTCAATTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVQARFPVSLSQWLL*SFLKELRMQVFNSL Trigger: GAGAGAATTGAATACCTGCATGCGAAGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGAGAGGCTGACGGGAAACCGAGCCTGTACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCAGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGCTCTTTGCCCTTAGGTaGCAAGTCATGCTGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPERGTVLLIDHLHLQGLLFALR*QVMLSR Trigger: CCTAGACAGCATGACTTGCAACCTAAGGGCAAAGAG...CAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCTGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR CAA 90 bp | TGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCCGACACAGGGCCGCTGTaGGTGCCTCTCCTTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CTNWGPSFQISKPLEDISDTGPL*VPLLFI Trigger: GATGAAAAGGAGAGGCACCAACAGCGGCCCTGTGTC...GGAAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS CCA 90 bp | TTCTTCCTTTCCTTCTTATTCAGCGGGAGGACACAGGGCCGCTGTTaGTGCCTCTCCTTTTCATCAAACCGAACAAATTGTTTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FFLSFLFSGRTQGRC*CLSFSSNRTNCLVM Trigger: CATCACCAAACAATTTGTTCGGTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTGTGTCCTCCCGCTGAATAAGAAGGAAAGGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CAA 90 bp | GGATCACCAAAGAGAAAGGCAGCCTTGCAAACTCAAACATCTGTAGACCTTCTCCTCTTTGCCCTTAGGTaGCAAGTCATGCTGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPKRKAALQTQTSVDLLLFALR*QVMLSR Trigger: CCTAGACAGCATGACTTGCAACCTAAGGGCAAAGAG...GAGAAGGTCTACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTTTGGTGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS TCA 90 bp | GCTGTTGGTGCCTCTCCTTTTCATCAAACCGAACAAATTGTTTGGTaGTGTAGACATTCTCATACTTCCAGCCACAAGGGCCCAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: AVGASPFHQTEQIVW*CRHSHTSSHKGPGI Trigger: GATTCCTGGGCCCTTGTGGCTGGAAGTATGAGAATGTCTACATCACCAAACAATTTGTTCGGTTTGATGAAAAGGAGAGGCACCAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CAA 90 bp | GGCATTATGATCGACATGTATCTTGAAGGATCACCAAAGAGAAAGGCAGCCTTGCTCTTTGCCCTTAGGTaGCAAGTCATGCTGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GIMIDMYLEGSPKRKAALLFALR*QVMLSR Trigger: CCTAGACAGCATGACTTGCAACCTAAGGGCAAAGAG...CAAGGCTGCCTTTCTCTTTGGTGATCCTTCAAGATACATGTCGATCATAATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CAA 90 bp | AGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCTTCTTCCAGCCCTGGCAAGCTTaGGAACTGTTTGTTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: RDCVAHRSSSFAGIVCFFQPWQA*ELFVHG Trigger: TCCATGAACAAACAGTTCCAAAGCTTGCCAGGGCTG...GAAGAAGCAGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
||
| CDS-3UTR CAA 90 bp | ATCACCAAAGAGAAAGGCAGCCTTGCAAACTCAAACATCTGTAGACCTTCTCAGCAGCCCTGGCAAGCTTaGGAACTGTTTGTTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: ITKEKGSLANSNICRPSQQPWQA*ELFVHG Trigger: TCCATGAACAAACAGTTCCAAAGCTTGCCAGGGCTG...CTGAGAAGGTCTACAGATGTTTGAGTTTGCAAGGCTGCCTTTCTCTTTGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CAA 90 bp | TGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCCATCATGGACGACTCCTaGGGTTCCTTGCTTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CTNWGPSFQISKPLEDISIMDDS*GSLLLS Trigger: GGAGAGAAGCAAGGAACCCAAGGAGTCGTCCATGAT...GGAAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
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| CDS TCA 90 bp | AAGGAGACTGACACGAGAATTTTAAGCTCTCCACGTAGTTTCAAGTaGACTTCCAGCCCTGGCAAGCTTTGGAACTGTTTGTTCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KETDTRILSSPRSFK*TSSPGKLWNCLFME Trigger: CTCCATGAACAAACAGTTCCAAAGCTTGCCAGGGCTGGAAGTTCACTTGAAACTACGTGGAGAGCTTAAAATTCTCGTGTCAGTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227368.2 ENSMUST00000227792.2 |
||
| CDS GCA 90 bp | TTTTTAAAGTACAGGCTCGGTTTCCCGTCAGCCTCTCTCAATGGCTaGTTTGATCGTTTCTCAAGGAGCTTCGCATGCAGGTATTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: FLKYRLGFPSASLNG*FDRFSRSFACRYSI Trigger: AATTGAATACCTGCATGCGAAGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGAGAGGCTGACGGGAAACCGAGCCTGTACTTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 |
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| CDS CCA 90 bp | GAGTCTGGTTCCAAGAAACAAGGTCATCAAATAGATTCAGCGGAGTaGCAAGGCCGTAAATCCACTGGATGGCTTCAGTATACCGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ESGSKKQGHQIDSAE*QGRKSTGWLQYTVL Trigger: TAAAACGGTATACTGAAGCCATCCAGTGGATTTACGGCCTTGCCACTCCGCTGAATCTATTTGATGACCTTGTTTCTTGGAACCAGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGGGACTGTGTTGCTCATAGATCATCTTCATTTGCAGGGATTGTCTGCCTCTCAATGGCTGCTTaGATCGTTTCTCAAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RKRDCVAHRSSSFAGIVCLSMAA*IVSQGA Trigger: AGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGAG...GCAGACAATCCCTGCAAATGAAGATGATCTATGAGCAACACAGTCCCTCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227792.2 |
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| CDS TCA 90 bp | CAGGTATTCAATTCTCTCCCTCTCCACTTTGGGGTAGAAGGAGACTaGCACGAGAATTTTAAGCTGCATCAGCATAGAAGACAACAATCC | + |
|
Preference number: 5 (lower is better) Translates to: QVFNSLPLHFGVEGD*HENFKLHQHRRQQS Trigger: GGATTGTTGTCTTCTATGCTGATGCAGCTTAAAATTCTCGTGTCAGTCTCCTTCTACCCCAAAGTGGAGAGGGAGAGAATTGAATACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
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| CDS CCA 90 bp | GGAATGCAGCTCGGTTCAAACATAGATATATTAAAGGCAGAATCATaGACGACTCCTTGGGTTCCTTGCTTCTCTCCACGTAGTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GMQLGSNIDILKAES*TTPWVPCFSPRSFK Trigger: CTTGAAACTACGTGGAGAGAAGCAAGGAACCCAAGGAGTCGTCCATGATTCTGCCTTTAATATATCTATGTTTGAACCGAGCTGCATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
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| CDS-3UTR CAA 90 bp | GATGCACTAACTGGGGACCAAGTTTTCAAATATCTAAGCCTTTGGAGGACATTTCTCTTTGCCCTTAGGTaGCAAGTCATGCTGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DALTGDQVFKYLSLWRTFLFALR*QVMLSR Trigger: CCTAGACAGCATGACTTGCAACCTAAGGGCAAAGAG...AAATGTCCTCCAAAGGCTTAGATATTTGAAAACTTGGTCCCCAGTTAGTGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR CAA 90 bp | TTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATATCACAGTTGGGAACTCTCTCAATGGCTGCTTaGATCGTTTCTCAAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGLRFQRGKTPSISQLGTLSMAA*IVSQGA Trigger: AGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGAG...AGTTCCCAACTGTGATATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 |
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| CDS-3UTR CAA 90 bp | ATGCCAGCCATCACCATAGCTTTAACTATGACACAGTTTAGATACTGTGTTTTGCAGCCCTGGCAAGCTTaGGAACTGTTTGTTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: MPAITIALTMTQFRYCVLQPWQA*ELFVHG Trigger: TCCATGAACAAACAGTTCCAAAGCTTGCCAGGGCTG...CAAAACACAGTATCTAAACTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS-3UTR CAA 90 bp | GAAGGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATACAGCCCTGGCAAGCTTaGGAACTGTTTGTTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: EGRIYLGLRFQRGKTPSIQPWQA*ELFVHG Trigger: TCCATGAACAAACAGTTCCAAAGCTTGCCAGGGCTG...TATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS CCA 90 bp | CAGAATAATACTGAGAGGAACCCAAGTCTCAGACACACTGAGACGTaGTTTAGGAATGCAGCTCGGTTCAAACATAGATATATTAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QNNTERNPSLRHTET*FRNAARFKHRYIKG Trigger: GCCTTTAATATATCTATGTTTGAACCGAGCTGCATTCCTAAACCACGTCTCAGTGTGTCTGAGACTTGGGTTCCTCTCAGTATTATTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
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| CDS-3UTR CAA 90 bp | GAAGGAAGGATTTATTTGGGCTTAAGGTTTCAGAGAGGTAAGACTCCATCAATACTCTCAATGGCTGCTTaGATCGTTTCTCAAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGRIYLGLRFQRGKTPSILSMAA*IVSQGA Trigger: AGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGAG...TATTGATGGAGTCTTACCTCTCTGAAACCTTAAGCCCAAATAAATCCTTCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 |
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| CDS-3UTR CAA 90 bp | ATGCCAGCCATCACCATAGCTTTAACTATGACACAGTTTAGATACTGTGTTTTGGTACTGAAAAGCTCTTaGCCCTTAGGTTGCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MPAITIALTMTQFRYCVLVLKSS*PLGCKS Trigger: TGACTTGCAACCTAAGGGCAAAGAGCTTTTCAGTAC...CAAAACACAGTATCTAAACTGTGTCATAGTTAAAGCTATGGTGATGGCTGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000228556.2 |
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| CDS TCA 72 bp | GCAACTTCTGGCCCACGGAAGTCAACAGCTCTGTCGTaGCCACCATATGGTGCAGGACTCCCAGGACTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATSGPRKSTALS*PPYGAGLPGLL Trigger: GAGAAGTCCTGGGAGTCCTGCACCATATGGTGGTCACGACAGAGCTGTTGACTTCCGTGGGCCAGAAGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS GCA 72 bp | GAGCAGGGCAACGGGTGGCAGGATCCAGTAAAAGGCTaGAGAGAAGAGGCTCACCGAAAGGAAGGCCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: EQGNGWQDPVKG*REEAHRKEGHK Trigger: TTTGTGGCCTTCCTTTCGGTGAGCCTCTTCTCTGCAGCCTTTTACTGGATCCTGCCACCCGTTGCCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS CCA 72 bp | GGTGATCATCCAGACAGAAGAGAGCAGGGCAACGGGTaGCAGGATCCAGTAAAAGGCTGCAGAGAAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GDHPDRREQGNG*QDPVKGCREEA Trigger: AGCCTCTTCTCTGCAGCCTTTTACTGGATCCTGCCACCCGTTGCCCTGCTCTCTTCTGTCTGGATGATCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS CCA 72 bp | CCCACGGAAGTCAACAGCTCTGTCGTGACCACCATATaGTGCAGGACTCCCAGGACTTCTCCTCTAGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PTEVNSSVVTTI*CRTPRTSPLVS Trigger: TGACACTAGAGGAGAAGTCCTGGGAGTCCTGCACCATATGGTGGTCACGACAGAGCTGTTGACTTCCGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS TCA 72 bp | ATCGTGCGCGCTTGGAACAGCATAGGAAAACACAGGTaGTCATCCAGACAGAAGAGAGCAGGGCAACGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IVRAWNSIGKHR*SSRQKRAGQRV Trigger: CACCCGTTGCCCTGCTCTCTTCTGTCTGGATGATCACCTGTGTTTTCCTATGCTGTTCCAAGCGCGCACGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS TCA 72 bp | CTTCACGGAGGCCACACGACAGAACGGCCAGAAGAATaGAGCATCGTGCGCGCTTGGAACAGCATAGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LHGGHTTERPEE*SIVRAWNSIGK Trigger: TTTTCCTATGCTGTTCCAAGCGCGCACGATGCTTCATTCTTCTGGCCGTTCTGTCGTGTGGCCTCCGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS GCA 72 bp | TACAGGCTCGGTTTCCCGTCAGCCTCTCTCAATGGCTaGTTTGATCGTTTCTCAAGGAGCTTCGCATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: YRLGFPSASLNG*FDRFSRSFACR Trigger: CCTGCATGCGAAGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGAGAGGCTGACGGGAAACCGAGCCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 |
||
| CDS TCA 72 bp | GCTCGGTTTCCCGTCAGCCTCTCTCAATGGCTGCTTTaGTCGTTTCTCAAGGAGCTTCGCATGCAGGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: ARFPVSLSQWLL*SFLKELRMQVF Trigger: GAATACCTGCATGCGAAGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGAGAGGCTGACGGGAAACCGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 |
||
| CDS GCA 72 bp | ACGGAAGTCAACAGCTCTGTCGTGACCACCATATGGTaGAGGACTCCCAGGACTTCTCCTCTAGTGTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: TEVNSSVVTTIW*RTPRTSPLVSF Trigger: GAATGACACTAGAGGAGAAGTCCTGGGAGTCCTGCACCATATGGTGGTCACGACAGAGCTGTTGACTTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS CCA 72 bp | GAAAGGAAGGCCACAAAGCAACAGACTCCCAAATGCTaGATGAAGTCCAGCCAGCTAGGGCTTCGTGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ERKATKQQTPKC*MKSSQLGLRGN Trigger: GTTTCCACGAAGCCCTAGCTGGCTGGACTTCATCCAGCATTTGGGAGTCTGTTGCTTTGTGGCCTTCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS CAA 72 bp | GGCTCGGTTTCCCGTCAGCCTCTCTCAATGGCTGCTTaGATCGTTTCTCAAGGAGCTTCGCATGCAGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: GSVSRQPLSMAA*IVSQGASHAGI Trigger: AATACCTGCATGCGAAGCTCCTTGAGAAACGATCAAAGCAGCCATTGAGAGAGGCTGACGGGAAACCGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 |
||
| CDS TCA 72 bp | CTGGCAAGCTTTGGAACTGTTTGTTCATGGAGGAGATaGGCCGATACAGCAGATAGTCCACAGCGGCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LASFGTVCSWRR*ADTADSPQRQT Trigger: TGTTTGCCGCTGTGGACTATCTGCTGTATCGGCTCATCTCCTCCATGAACAAACAGTTCCAAAGCTTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS CCA 72 bp | CAAATGCTGGATGAAGTCCAGCCAGCTAGGGCTTCGTaGAAACACATAAGTCCCCCAAAGCCTCAGGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: QMLDEVQPARAS*KHISPPKPQEN Trigger: ATTTTCCTGAGGCTTTGGGGGACTTATGTGTTTCCACGAAGCCCTAGCTGGCTGGACTTCATCCAGCATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS CCA 72 bp | TCCTTCTTATTCAGCGGGAGGACACAGGGCCGCTGTTaGTGCCTCTCCTTTTCATCAAACCGAACAAATTGT | + |
|
Preference number: 6 (lower is better) Translates to: SFLFSGRTQGRC*CLSFSSNRTNC Trigger: ACAATTTGTTCGGTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTGTGTCCTCCCGCTGAATAAGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
||
| CDS CAA 72 bp | TTCCTTCTTATTCAGCGGGAGGACACAGGGCCGCTGTaGGTGCCTCTCCTTTTCATCAAACCGAACAAATTG | + |
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Preference number: 6 (lower is better) Translates to: FLLIQREDTGPL*VPLLFIKPNKL Trigger: CAATTTGTTCGGTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTGTGTCCTCCCGCTGAATAAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS CAA 90 bp | ACAGGGCCGCTGTTGGTGCCTCTCCTTTTCATCAAACCGAACAAATaGTTTGGTGATGTAGACATTCTCATACTTCCAGCCACAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TGPLLVPLLFIKPNK*FGDVDILILPATRA Trigger: GGCCCTTGTGGCTGGAAGTATGAGAATGTCTACATCACCAAACAATTTGTTCGGTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS GCA 72 bp | TTCTTATTCAGCGGGAGGACACAGGGCCGCTGTTGGTaGCTCTCCTTTTCATCAAACCGAACAAATTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FLFSGRTQGRCW*LSFSSNRTNCL Trigger: CAAACAATTTGTTCGGTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTGTGTCCTCCCGCTGAATAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS GCA 72 bp | AATGGCTGCTTTGATCGTTTCTCAAGGAGCTTCGCATaGAGGTATTCAATTCTCTCCCTCTCCACTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: NGCFDRFSRSFA*RYSILSLSTLG Trigger: CCCCAAAGTGGAGAGGGAGAGAATTGAATACCTGCATGCGAAGCTCCTTGAGAAACGATCAAAGCAGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 |
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| CDS CAA 90 bp | TTTCTTCCTTTCCTTCTTATTCAGCGGGAGGACACAGGGCCGCTGTaGGTGCCTCTCCTTTTCATCAAACCGAACAAATTGTTTGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: FLPFLLIQREDTGPL*VPLLFIKPNKLFGD Trigger: ATCACCAAACAATTTGTTCGGTTTGATGAAAAGGAGAGGCACCAACAGCGGCCCTGTGTCCTCCCGCTGAATAAGAAGGAAAGGAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS GCA 72 bp | AAATATTTTCCACATGTCCAAAGATCACTACCCCAGTaGCAGCCGCAATCAAAGCGTTCCTACCTTCACGGA | + |
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Preference number: 6 (lower is better) Translates to: KYFPHVQRSLPQ*QPQSKRSYLHG Trigger: TCCGTGAAGGTAGGAACGCTTTGATTGCGGCTGGCACTGGGGTAGTGATCTTTGGACATGTGGAAAATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS GCA 72 bp | AACAGCCCAAGGGTTTTCTTCTCCTTAGGAGTCAGCTaGAAAGATGGGACGATGACATATTTCTTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: NSPRVFFSLGVS*KDGTMTYFFLS Trigger: GGAAAGGAAGAAATATGTCATCGTCCCATCTTTGCAGCTGACTCCTAAGGAGAAGAAAACCCTTGGGCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS CCA 72 bp | GATTCAGCGGAGTGGCAAGGCCGTAAATCCACTGGATaGCTTCAGTATACCGTTTTAAAAGTGGGAAATGTA | + |
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Preference number: 6 (lower is better) Translates to: DSAEWQGRKSTG*LQYTVLKVGNV Trigger: TACATTTCCCACTTTTAAAACGGTATACTGAAGCCATCCAGTGGATTTACGGCCTTGCCACTCCGCTGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS CCA 72 bp | TCCAAGAAACAAGGTCATCAAATAGATTCAGCGGAGTaGCAAGGCCGTAAATCCACTGGATGGCTTCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: SKKQGHQIDSAE*QGRKSTGWLQY Trigger: ATACTGAAGCCATCCAGTGGATTTACGGCCTTGCCACTCCGCTGAATCTATTTGATGACCTTGTTTCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS CCA 72 bp | GCATGGCTGGGACTAAAAAGAGAGACCACCAGAGTCTaGTTCCAAGAAACAAGGTCATCAAATAGATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: AWLGLKRETTRV*FQETRSSNRFS Trigger: GCTGAATCTATTTGATGACCTTGTTTCTTGGAACCAGACTCTGGTGGTCTCTCTTTTTAGTCCCAGCCATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS TCA 72 bp | GCCTCTCCTTTTCATCAAACCGAACAAATTGTTTGGTaGTGTAGACATTCTCATACTTCCAGCCACAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ASPFHQTEQIVW*CRHSHTSSHKG Trigger: GCCCTTGTGGCTGGAAGTATGAGAATGTCTACATCACCAAACAATTTGTTCGGTTTGATGAAAAGGAGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS TCA 72 bp | AATTCTCTCCCTCTCCACTTTGGGGTAGAAGGAGACTaGCACGAGAATTTTAAGCTGCATCAGCATAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: NSLPLHFGVEGD*HENFKLHQHRR Trigger: TCTTCTATGCTGATGCAGCTTAAAATTCTCGTGTCAGTCTCCTTCTACCCCAAAGTGGAGAGGGAGAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
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| CDS CCA 72 bp | CTCGGTTCAAACATAGATATATTAAAGGCAGAATCATaGACGACTCCTTGGGTTCCTTGCTTCTCTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: LGSNIDILKAES*TTPWVPCFSPR Trigger: ACGTGGAGAGAAGCAAGGAACCCAAGGAGTCGTCCATGATTCTGCCTTTAATATATCTATGTTTGAACCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022913.6 |
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| CDS CAA 72 bp | AGTGGGAAATGTACTGAAAAGCTCTTTGCCCTTAGGTaGCAAGTCATGCTGTCTAGGAGACCTCTGAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: SGKCTEKLFALR*QVMLSRRPLKL Trigger: TAACTTCAGAGGTCTCCTAGACAGCATGACTTGCAACCTAAGGGCAAAGAGCTTTTCAGTACATTTCCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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| CDS CAA 72 bp | CTGTTGGTGCCTCTCCTTTTCATCAAACCGAACAAATaGTTTGGTGATGTAGACATTCTCATACTTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LLVPLLFIKPNK*FGDVDILILPA Trigger: GGCTGGAAGTATGAGAATGTCTACATCACCAAACAATTTGTTCGGTTTGATGAAAAGGAGAGGCACCAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022913.6 ENSMUST00000227368.2 ENSMUST00000227792.2 ENSMUST00000228556.2 |
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