Pregenerated sensors for DCST2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109293Ensembl transcript IDs: ENSMUST00000208216.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCCTCCGGTTCTGAGGGGTaGAGGGTGCAGCGCGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: GFPKWCLGFWEKGEAHKASGSEG*RVQRGD Trigger: GTCGCCGCGCTGCACCCTGCACCCCTCAGAACCGGA...GGCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR TCA 90 bp | CAGGGATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGGAAGGCAGCCAAAGTaGCGGTGGTCACCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QGFPKWCLGFWEKGEAHKGRQPK*RWSPGS Trigger: GCTGCCTGGTGACCACCGTCACTTTGGCTGCCTTCC...TTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR TCA 90 bp | CAGGGATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAATTGGCCTTGGTCAGCTaGCCGTCGCCTCACTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: QGFPKWCLGFWEKGEAHKLALVS*PSPHCS Trigger: CGAGCAGTGAGGCGACGGTCAGCTGACCAAGGCCAA...TTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR TCA 90 bp | CCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGCTTCACTTGCCCGGGTaGAGTTCTGCAGGGTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: PGVLGERGGPQSQMSFWELHLPG*SSAGCS Trigger: CGAACACCCTGCAGAACTTCACCCGGGCAAGTGAAG...CTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR TCA 90 bp | GGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCTCACGCCGCAGCCTGCTaGCATAGCTGCCAAACAGAG | + |
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Preference number: 4 (lower is better) Translates to: GRPTKPDELLGDAVDASSHAAAC*HSCQTE Trigger: CTCTGTTTGGCAGCTATGTCAGCAGGCTGCGGCGTG...AGAGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | GGGATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCAGCAGCAACCGGCTCTaGTTGGAGAAGGCCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GISEVVPGVLGERGGPQSSSNRL*LEKACG Trigger: TCCACAGGCCTTCTCCAAGCAGAGCCGGTTGCTGCT...GCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | CTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGGCCCGGGTGAAGTTCTaGAGGGTGTTCGCACAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LGERGGPQSQMSFWEMLWARVKF*RVFAQG Trigger: GCCTTGTGCGAACACCCTGCAGAACTTCACCCGGGC...CCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | CAGGGATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGTTCAGGGCCAGCTCTaGCCCACAAGCCACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QGFPKWCLGFWEKGEAHKVQGQL*PTSHSF Trigger: GAAGCTGTGGCTTGTGGGGCAGAGCTGGCCCTGAAC...TTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | AGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCACCGTAGGCATCCCTaGAAGGGAGCGTACTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RGGPQSQMSFWEMLWTLPHRRHP*KGAYCL Trigger: GAGGCAGTACGCTCCCTTGCAGGGATGCCTACGGTG...AGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | GATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCCAGCTCCCCACAGCCCATaGAGTAAGACTGCTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: DFRSGAWGSGRKGRPTKPAPHSP*SKTAAA Trigger: CGCTGCAGCAGTCTTACTGCATGGGCTGTGGGGAGC...TGGCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | GGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCTAGCTCCAGGTCCAGGTaGCCCTGGTTGGAGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GRPTKPDELLGDAVDASSSSRSR*PWLESG Trigger: TCCACTCTCCAACCAGGGGCACCTGGACCTGGAGCT...AGAGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | CAGGGATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGGCCTTTCTTCGAGCTaGAGCCAGCCACAGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: QGFPKWCLGFWEKGEAHKGLSSS*SQPQLR Trigger: CCTCAGCTGTGGCTGGCTGCAGCTCGAAGAAAGGCC...TTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | GCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGACCAGGTGCCCCTGGTTaGAGAGTGGAGCAGAACACA | + |
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Preference number: 4 (lower is better) Translates to: AWGSGRKGRPTKPDELLGPGAPG*RVEQNT Trigger: TGTGTTCTGCTCCACTCTCCAACCAGGGGCACCTGG...TCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | GGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCTGATGCTGACAGCCTCCTaGAGGTCCAAAGCCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: GGPQSQMSFWEMLWTLPLMLTAS*RSKATW Trigger: CCAGGTGGCTTTGGACCTGCAGGAGGCTGTCAGCAT...CAGAGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | AGGGATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGGCAACCGGCTCTGCTTaGAGAAGGCCTGTGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RDFRSGAWGSGRKGRPTKATGSA*RRPVEA Trigger: TGCTTCCACAGGCCTTCTCCAAGCAGAGCCGGTTGC...CTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGAGCATTTCAGCCGTCTaGTTCAGGGCCAGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LGERGGPQSQMSFWEMLWSISAV*FRASSA Trigger: GGCAGAGCTGGCCCTGAACCAGACGGCTGAAATGCT...CCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | GGGATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCGCTCGGGCTTGGAGGTaGACTTGTCTGAAAGGTTCG | + |
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Preference number: 4 (lower is better) Translates to: GISEVVPGVLGERGGPQSARAWR*TCLKGS Trigger: CGAACCTTTCAGACAAGTCCACCTCCAAGCCCGAGC...GCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR TCA 90 bp | GGGATTTCCGAAGTGGTGCCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCGGCTCCGAGAGGAATTaGGGTCCACAGAGAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: GISEVVPGVLGERGGPQSGSERN*GPQRSS Trigger: ACTACTTCTCTGTGGACCTCAATTCCTCTCGGAGCC...GCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGGCACCACTTCGGAAATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTGGAGGTGGACTTGTCTaGAAGGTTCGTGCCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: RKGRPTKPDELLGDAVDAGGGLV*KVRAQC Trigger: GCACTGGGCACGAACCTTTCAGACAAGTCCACCTCC...AGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGGAGACCTCTGCAGCCTaGGGTACTGCAGGACACAAA | + |
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Preference number: 4 (lower is better) Translates to: LGERGGPQSQMSFWEMLWETSAA*GTAGHK Trigger: TTTGTGTCCTGCAGTACCCCAGGCTGCAGAGGTCTC...CCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR TCA 90 bp | GGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACCACCTGTGTGCATTTTaGGTAAGGGTTGCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GRKGRPTKPDELLGDAVDHLCAF*VRVAQL Trigger: GAGCTGGGCAACCCTTACTCAAAATGCACACAGGTG...GTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR TCA 90 bp | AGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTAGCTGCCAAACAGAGTaGCGAAGAAGCACAGACCGT | + |
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Preference number: 4 (lower is better) Translates to: RGGPQSQMSFWEMLWTLPSCQTE*RRSTDR Trigger: ACGGTCTGTGCTTCTTCGTCACTCTGTTTGGCAGCT...AGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | AAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCCTTTCCTGTTCCCTaGTGGGGTAATAGGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KGRPTKPDELLGDAVDASSFPVP*WGNRRH Trigger: GTGCCTCCTATTACCCCAGCAGGGAACAGGAAAGGA...GGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | AAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCAAGGTTCGTGCCCAGTaGTTCCTGAAGCTGTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: KGRPTKPDELLGDAVDASKVRAQ*FLKLLS Trigger: CGACAACAGCTTCAGGAAGCACTGGGCACGAACCTT...GGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCTCTTGGAGAAGGCCTGTaGAAGCAGCAAGAGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: GRPTKPDELLGDAVDASSLGEGL*KQQEHR Trigger: TCTGTGCTCTTGCTGCTTCCACAGGCCTTCTCCAAG...AGAGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | CCTGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATTTCTGGACCAAGCTaGCAAGTCCACAGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGVLGERGGPQSQMSFWEISGPS*QVHRPA Trigger: TGCTGGTCTGTGGACTTGCCAGCTTGGTCCAGAAAT...CTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | AGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCTGAAAGGTCCAAAGCCACCTaGGACAGGCTCCGAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: RPTKPDELLGDAVDASSERSKAT*DRLREE Trigger: TTCCTCTCGGAGCCTGTCCCAGGTGGCTTTGGACCT...TTCAGAGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | GGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACCCCCTGGTTGGAGAGTaGAGCAGAACACACAGAACA | + |
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Preference number: 4 (lower is better) Translates to: GRKGRPTKPDELLGDAVDPLVGE*SRTHRT Trigger: TGTTCTGTGTGTTCTGCTCCACTCTCCAACCAGGGG...GTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACTCTCCTCATCACTaGAGTCCAGCTCCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGRKGRPTKPDELLGDAVDSPHH*SPAPGP Trigger: TGGACCTGGAGCTGGACTCCAGTGATGAGGAGAGTC...CACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | AAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCCACTGCTTTCTGTCCTaGTTCCTGTTTCCTGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: KGRPTKPDELLGDAVDASHCFLS*FLFPAR Trigger: GCGAGCAGGAAACAGGAACCAGGACAGAAAGCAGTG...GGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | GGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGTGTCTGAAAGGTTCGTaGCCAGTGCTTCCTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: GVLGERGGPQSQMSFWEMCLKGS*PVLPEA Trigger: AGCTTCAGGAAGCACTGGGCACGAACCTTTCAGACA...CATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGCATTCTGCAGGCACCTaGCTATGTGTTTCACGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LGERGGPQSQMSFWEMLWHSAGT*LCVSRH Trigger: ATGCCGTGAAACACATAGCCAGGTGCCTGCAGAATG...CCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | GGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCTCAATACCACACATTCTaGAGGCACCTGGCTATGTGT | + |
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Preference number: 4 (lower is better) Translates to: GRPTKPDELLGDAVDASSQYHTF*RHLAMC Trigger: ACACATAGCCAGGTGCCTGCAGAATGTGTGGTATTG...AGAGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR GCA 90 bp | CTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACACAAAGTTCTCCATaGCCCCTTTGTCTTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGERGGPQSQMSFWEMLWTQSSP*PLCLQA Trigger: AGCCTGAAGACAAAGGGGGCATGGAGAACTTTGTGT...CCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | TGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATTTTCCTGTTCCCTGCTaGGGTAATAGGAGGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: WGSGRKGRPTKPDELLGDFPVPC*GNRRHR Trigger: TCTGTGCCTCCTATTACCCCAGCAGGGAACAGGAAA...ATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | TGGGGTTCTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATAGCATGATGAGGAGATaGCGGGTGAGGTTAAAGATC | + |
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Preference number: 4 (lower is better) Translates to: WGSGRKGRPTKPDELLGDSMMRR*RVRLKI Trigger: GATCTTTAACCTCACCCGCCATCTCCTCATCATGCT...ATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAGAACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR TCA 90 bp | GGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACCACATATCACCAATATaGAGGAGCCAATACCACACA | + |
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Preference number: 4 (lower is better) Translates to: GRKGRPTKPDELLGDAVDHISPI*RSQYHT Trigger: TGTGTGGTATTGGCTCCTTCATATTGGTGATATGTG...GTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACCACTTTGGCCTTCTaGGCAATAGCTTTAATCTTA | + |
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Preference number: 4 (lower is better) Translates to: LGERGGPQSQMSFWEMLWTTLAF*AIALIL Trigger: TAAGATTAAAGCTATTGCCCAGAAGGCCAAAGTGGT...CCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 90 bp | TTGGAGAAGGCCTGTGGAAGCAGCAAGAGCACAGAGACGCGGACCTaGCGGGAGAACCCCATGCCCAAGCTCAGGAAGGCAGCCAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: LEKACGSSKSTETRT*RENPMPKLRKAAKV Trigger: CACTTTGGCTGCCTTCCTGAGCTTGGGCATGGGGTTCTCCCGGCAGGTCCGCGTCTCTGTGCTCTTGCTGCTTCCACAGGCCTTCTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS TCA 90 bp | AGCCCATCAAAGACAGCGCCTCCCTGGCAGTGTACAACTTCATGCTaGCAGCCTCCTGCAGGTCCAAAGCCACCTGGGACAGGCTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: SPSKTAPPWQCTTSC*QPPAGPKPPGTGSE Trigger: CTCGGAGCCTGTCCCAGGTGGCTTTGGACCTGCAGGAGGCTGTCAGCATGAAGTTGTACACTGCCAGGGAGGCGCTGTCTTTGATGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 90 bp | GACAGCGCCTCCCTGGCAGTGTACAACTTCATGCTGACAGCCTCCTaGAGGTCCAAAGCCACCTGGGACAGGCTCCGAGAGGAATTGAGG | + |
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Preference number: 5 (lower is better) Translates to: DSASLAVYNFMLTAS*RSKATWDRLREELR Trigger: CCTCAATTCCTCTCGGAGCCTGTCCCAGGTGGCTTTGGACCTGCAGGAGGCTGTCAGCATGAAGTTGTACACTGCCAGGGAGGCGCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CCA 90 bp | GCACCAGCCCAAAGGAAGCTACCAGTAGCAGCAACCGGCTCTGCTTaGAGAAGGCCTGTGGAAGCAGCAAGAGCACAGAGACGCGGACCT | + |
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Preference number: 5 (lower is better) Translates to: APAQRKLPVAATGSA*RRPVEAARAQRRGP Trigger: AGGTCCGCGTCTCTGTGCTCTTGCTGCTTCCACAGGCCTTCTCCAAGCAGAGCCGGTTGCTGCTACTGGTAGCTTCCTTTGGGCTGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 90 bp | TGTAGCACCAGCCCAAAGGAAGCTACCAGTAGCAGCAACCGGCTCTaGTTGGAGAAGGCCTGTGGAAGCAGCAAGAGCACAGAGACGCGG | + |
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Preference number: 5 (lower is better) Translates to: CSTSPKEATSSSNRL*LEKACGSSKSTETR Trigger: CCGCGTCTCTGTGCTCTTGCTGCTTCCACAGGCCTTCTCCAAGCAGAGCCGGTTGCTGCTACTGGTAGCTTCCTTTGGGCTGGTGCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 90 bp | CTGTTGTCGAAGTTTCAGCTCCTGCTCGGGGGCCTTTCTTCGAGCTaGAGCCAGCCACAGCTGAGGACTCTCCTCATCACTGGAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLSKFQLLLGGLSSS*SQPQLRTLLITGVQ Trigger: CTGGACTCCAGTGATGAGGAGAGTCCTCAGCTGTGGCTGGCTGCAGCTCGAAGAAAGGCCCCCGAGCAGGAGCTGAAACTTCGACAACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCAGGTGCCCCTGGTaGGAGAGTGGAGCAGAACAC | + |
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Preference number: 5 (lower is better) Translates to: RKGRPTKPDELLGDAVDASRCPW*ESGAEH Trigger: GTGTTCTGCTCCACTCTCCAACCAGGGGCACCTGGA...AGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CAA 90 bp | GAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCGGTCACCCACCACTTaGGCCTTCTGGGCAATAGCT | + |
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Preference number: 5 (lower is better) Translates to: ERGGPQSQMSFWEMLWTLRSPTT*AFWAIA Trigger: AGCTATTGCCCAGAAGGCCAAAGTGGTGGGTGACCG...AAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CAA 90 bp | GGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCTGAAGTTCTCCATGCCCCCTTaGTCTTCAGGCTCCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: GPQSQMSFWEMLWTLPLKFSMPP*SSGSPQ Trigger: CTGTGGGGAGCCTGAAGACAAAGGGGGCATGGAGAA...CTTCAGAGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 90 bp | TTCCTGCTCGCTCGGGCTTGGAGGTGGACTTGTCTGAAAGGTTCGTaGCCAGTGCTTCCTGAAGCTGTTGTCGAAGTTTCAGCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: FLLARAWRWTCLKGS*PVLPEAVVEVSAPA Trigger: AGCAGGAGCTGAAACTTCGACAACAGCTTCAGGAAGCACTGGGCACGAACCTTTCAGACAAGTCCACCTCCAAGCCCGAGCGAGCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGGGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTGGGTGGCTGTCATGTaGAACTCAAACTCTCGACGT | + |
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Preference number: 5 (lower is better) Translates to: RKGRPTKPDELLGDAVDAWVAVM*NSNSRR Trigger: ACGTCGAGAGTTTGAGTTCAACATGACAGCCACCCA...AGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCCCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGCCCACAAAGCCAGATGAGCTTCTGGGAGATGCTGTGGACGCTTCCTCTCACACAGAACAGGTGTaGTTTAGGAGACGGAAACAG | + |
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Preference number: 5 (lower is better) Translates to: GRPTKPDELLGDAVDASSHTEQV*FRRRKQ Trigger: CTGTTTCCGTCTCCTAAACAACACCTGTTCTGTGTG...AGAGGAAGCGTCCACAGCATCTCCCAGAAGCTCATCTGGCTTTGTGGGCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CCA 90 bp | GACCGGAAGAACTTGCGTATCCGGTCACCCACCACTTTGGCCTTCTaGGCAATAGCTTTAATCTTAGACAGAGCACTGATAAGGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: DRKNLRIRSPTTLAF*AIALILDRALIRGC Trigger: GCAGCCCCTTATCAGTGCTCTGTCTAAGATTAAAGCTATTGCCCAGAAGGCCAAAGTGGTGGGTGACCGGATACGCAAGTTCTTCCGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CCA 90 bp | AAAATTCGAGGTAGGAAGGCAAGACACAGAATTTCTGGACCAAGCTaGCAAGTCCACAGACCAGCAGTTTGTAGGGCAAGAGCGCATAAC | + |
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Preference number: 5 (lower is better) Translates to: KIRGRKARHRISGPS*QVHRPAVCRARAHN Trigger: GTTATGCGCTCTTGCCCTACAAACTGCTGGTCTGTGGACTTGCCAGCTTGGTCCAGAAATTCTGTGTCTTGCCTTCCTACCTCGAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CCA 90 bp | AACACAGGTGAGGGAATCCCGAAACGACCTTCATACAGTGGATCTTaGCATCATCAAACACCTGTGTGCATTTTGAGTAAGGGTTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: NTGEGIPKRPSYSGS*HHQTPVCILSKGCP Trigger: TGGGCAACCCTTACTCAAAATGCACACAGGTGTTTGATGATGCCAAGATCCACTGTATGAAGGTCGTTTCGGGATTCCCTCACCTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 90 bp | CAAACACCTGTGTGCATTTTGAGTAAGGGTTGCCCAGCTCGGAGTTaGACATATCACCAATATGAAGGAGCCAATACCACACATTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QTPVCILSKGCPARS*TYHQYEGANTTHSA Trigger: TGCAGAATGTGTGGTATTGGCTCCTTCATATTGGTGATATGTGCAACTCCGAGCTGGGCAACCCTTACTCAAAATGCACACAGGTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 90 bp | GGATCTTGGCATCATCAAACACCTGTGTGCATTTTGAGTAAGGGTTaGCCAGCTCGGAGTTGCACATATCACCAATATGAAGGAGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: GSWHHQTPVCILSKG*PARSCTYHQYEGAN Trigger: ATTGGCTCCTTCATATTGGTGATATGTGCAACTCCGAGCTGGGCAACCCTTACTCAAAATGCACACAGGTGTTTGATGATGCCAAGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 90 bp | AAACGACCTTCATACAGTGGATCTTGGCATCATCAAACACCTGTGTaGATTTTGAGTAAGGGTTGCCCAGCTCGGAGTTGCACATATCAC | + |
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Preference number: 5 (lower is better) Translates to: KRPSYSGSWHHQTPV*ILSKGCPARSCTYH Trigger: GTGATATGTGCAACTCCGAGCTGGGCAACCCTTACTCAAAATGCACACAGGTGTTTGATGATGCCAAGATCCACTGTATGAAGGTCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS TCA 90 bp | CTTCATACAGTGGATCTTGGCATCATCAAACACCTGTGTGCATTTTaGGTAAGGGTTGCCCAGCTCGGAGTTGCACATATCACCAATATG | + |
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Preference number: 5 (lower is better) Translates to: LHTVDLGIIKHLCAF*VRVAQLGVAHITNM Trigger: CATATTGGTGATATGTGCAACTCCGAGCTGGGCAACCCTTACTCAAAATGCACACAGGTGTTTGATGATGCCAAGATCCACTGTATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 72 bp | CTCCAGCATTTCAGCCGTCTGGTTCAGGGCCAGCTCTaGCCCACAAGCCACAGCTTCACTTGCCCGGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LQHFSRLVQGQL*PTSHSFTCPGE Trigger: TTCACCCGGGCAAGTGAAGCTGTGGCTTGTGGGGCAGAGCTGGCCCTGAACCAGACGGCTGAAATGCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CAA 90 bp | AGCACCAGCCCAAAGGAAGCTACCAGTAGCAGCAACCGGCTCTGCTaGGAGAAGGCCTGTGGAAGCAGCAAGAGCACAGAGACGCGGACC | + |
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Preference number: 6 (lower is better) Translates to: STSPKEATSSSNRLC*EKACGSSKSTETRT Trigger: GGTCCGCGTCTCTGTGCTCTTGCTGCTTCCACAGGCCTTCTCCAAGCAGAGCCGGTTGCTGCTACTGGTAGCTTCCTTTGGGCTGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 72 bp | CCACAAGCCACAGCTTCACTTGCCCGGGTGAAGTTCTaGAGGGTGTTCGCACAAGGCCCTTGTAGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: PQATASLARVKF*RVFAQGPCSTS Trigger: GCTGGTGCTACAAGGGCCTTGTGCGAACACCCTGCAGAACTTCACCCGGGCAAGTGAAGCTGTGGCTTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 72 bp | TCCCTGGCAGTGTACAACTTCATGCTGACAGCCTCCTaGAGGTCCAAAGCCACCTGGGACAGGCTCCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SLAVYNFMLTAS*RSKATWDRLRE Trigger: CTCTCGGAGCCTGTCCCAGGTGGCTTTGGACCTGCAGGAGGCTGTCAGCATGAAGTTGTACACTGCCAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS TCA 72 bp | AAGACAGCGCCTCCCTGGCAGTGTACAACTTCATGCTaGCAGCCTCCTGCAGGTCCAAAGCCACCTGGGACA | + |
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Preference number: 6 (lower is better) Translates to: KTAPPWQCTTSC*QPPAGPKPPGT Trigger: TGTCCCAGGTGGCTTTGGACCTGCAGGAGGCTGTCAGCATGAAGTTGTACACTGCCAGGGAGGCGCTGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS TCA 72 bp | GGTCCAAAGCCACCTGGGACAGGCTCCGAGAGGAATTaGGGTCCACAGAGAAGTAGTGGGTGGCTGTCATGT | + |
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Preference number: 6 (lower is better) Translates to: GPKPPGTGSERN*GPQRSSGWLSC Trigger: ACATGACAGCCACCCACTACTTCTCTGTGGACCTCAATTCCTCTCGGAGCCTGTCCCAGGTGGCTTTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS TCA 72 bp | GTTTCCTGCTCGCTCGGGCTTGGAGGTGGACTTGTCTaGAAGGTTCGTGCCCAGTGCTTCCTGAAGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: VSCSLGLGGGLV*KVRAQCFLKLL Trigger: CAACAGCTTCAGGAAGCACTGGGCACGAACCTTTCAGACAAGTCCACCTCCAAGCCCGAGCGAGCAGGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 72 bp | AGCCCAAAGGAAGCTACCAGTAGCAGCAACCGGCTCTaGTTGGAGAAGGCCTGTGGAAGCAGCAAGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: SPKEATSSSNRL*LEKACGSSKST Trigger: TGTGCTCTTGCTGCTTCCACAGGCCTTCTCCAAGCAGAGCCGGTTGCTGCTACTGGTAGCTTCCTTTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CAA 72 bp | CCAAAGGAAGCTACCAGTAGCAGCAACCGGCTCTGCTaGGAGAAGGCCTGTGGAAGCAGCAAGAGCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: PKEATSSSNRLC*EKACGSSKSTE Trigger: CTCTGTGCTCTTGCTGCTTCCACAGGCCTTCTCCAAGCAGAGCCGGTTGCTGCTACTGGTAGCTTCCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CCA 72 bp | CAAAGGAAGCTACCAGTAGCAGCAACCGGCTCTGCTTaGAGAAGGCCTGTGGAAGCAGCAAGAGCACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: QRKLPVAATGSA*RRPVEAARAQR Trigger: TCTCTGTGCTCTTGCTGCTTCCACAGGCCTTCTCCAAGCAGAGCCGGTTGCTGCTACTGGTAGCTTCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 72 bp | GCTCGGGCTTGGAGGTGGACTTGTCTGAAAGGTTCGTaGCCAGTGCTTCCTGAAGCTGTTGTCGAAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ARAWRWTCLKGS*PVLPEAVVEVS Trigger: TGAAACTTCGACAACAGCTTCAGGAAGCACTGGGCACGAACCTTTCAGACAAGTCCACCTCCAAGCCCGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS TCA 72 bp | GGGTTGCCCAGCTCGGAGTTGCACATATCACCAATATaGAGGAGCCAATACCACACATTCTGCAGGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: GLPSSELHISPI*RSQYHTFCRHL Trigger: CAGGTGCCTGCAGAATGTGTGGTATTGGCTCCTTCATATTGGTGATATGTGCAACTCCGAGCTGGGCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS TCA 72 bp | GTAGCTTGCCAAGCAGTTTCATCACGGGAGTGCGGATaGCCGTTCGCAGGAAAAATTCGAGGTAGGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VACQAVSSRECG*PFAGKIRGRKA Trigger: TGCCTTCCTACCTCGAATTTTTCCTGCGAACGGTCATCCGCACTCCCGTGATGAAACTGCTTGGCAAGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CCA 72 bp | AATGGCCTTAGAAAAGGCAACCGGATGGCCAGCACCTaGAGGATATTCATTTGGCCTTGGTCAGCTGACCGT | + |
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Preference number: 6 (lower is better) Translates to: NGLRKGNRMAST*RIFIWPWSADR Trigger: ACGGTCAGCTGACCAAGGCCAAATGAATATCCTCCAGGTGCTGGCCATCCGGTTGCCTTTTCTAAGGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CAA 90 bp | CACCTGGCTATGTGTTTCACGGCATCTATAATGGACCGGAAGAACTaGCGTATCCGGTCACCCACCACTTTGGCCTTCTGGGCAATAGCT | + |
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Preference number: 6 (lower is better) Translates to: HLAMCFTASIMDRKN*RIRSPTTLAFWAIA Trigger: AGCTATTGCCCAGAAGGCCAAAGTGGTGGGTGACCGGATACGCAAGTTCTTCCGGTCCATTATAGATGCCGTGAAACACATAGCCAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS TCA 72 bp | TGGTCCGATGGCTCAGAAGCATGTTGTAAAGGTAGGTaGTCCTTTCCTGTTCCCTGCTGGGGTAATAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: WSDGSEACCKGR*SFPVPCWGNRR Trigger: CCTCCTATTACCCCAGCAGGGAACAGGAAAGGATCACCTACCTTTACAACATGCTTCTGAGCCATCGGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CCA 72 bp | GGTAGGAAGGCAAGACACAGAATTTCTGGACCAAGCTaGCAAGTCCACAGACCAGCAGTTTGTAGGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GRKARHRISGPS*QVHRPAVCRAR Trigger: TCTTGCCCTACAAACTGCTGGTCTGTGGACTTGCCAGCTTGGTCCAGAAATTCTGTGTCTTGCCTTCCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CAA 72 bp | ATGTGTTTCACGGCATCTATAATGGACCGGAAGAACTaGCGTATCCGGTCACCCACCACTTTGGCCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: MCFTASIMDRKN*RIRSPTTLAFW Trigger: CCAGAAGGCCAAAGTGGTGGGTGACCGGATACGCAAGTTCTTCCGGTCCATTATAGATGCCGTGAAACACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CAA 72 bp | GACCGGAAGAACTTGCGTATCCGGTCACCCACCACTTaGGCCTTCTGGGCAATAGCTTTAATCTTAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: DRKNLRIRSPTT*AFWAIALILDR Trigger: TCTGTCTAAGATTAAAGCTATTGCCCAGAAGGCCAAAGTGGTGGGTGACCGGATACGCAAGTTCTTCCGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CAA 90 bp | TCTATAATGGACCGGAAGAACTTGCGTATCCGGTCACCCACCACTTaGGCCTTCTGGGCAATAGCTTTAATCTTAGACAGAGCACTGATA | + |
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Preference number: 6 (lower is better) Translates to: SIMDRKNLRIRSPTT*AFWAIALILDRALI Trigger: TATCAGTGCTCTGTCTAAGATTAAAGCTATTGCCCAGAAGGCCAAAGTGGTGGGTGACCGGATACGCAAGTTCTTCCGGTCCATTATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS GCA 72 bp | GTGTGCATTTTGAGTAAGGGTTGCCCAGCTCGGAGTTaGACATATCACCAATATGAAGGAGCCAATACCACA | + |
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Preference number: 6 (lower is better) Translates to: VCILSKGCPARS*TYHQYEGANTT Trigger: TGTGGTATTGGCTCCTTCATATTGGTGATATGTGCAACTCCGAGCTGGGCAACCCTTACTCAAAATGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CCA 72 bp | AACTTGCGTATCCGGTCACCCACCACTTTGGCCTTCTaGGCAATAGCTTTAATCTTAGACAGAGCACTGATA | + |
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Preference number: 6 (lower is better) Translates to: NLRIRSPTTLAF*AIALILDRALI Trigger: TATCAGTGCTCTGTCTAAGATTAAAGCTATTGCCCAGAAGGCCAAAGTGGTGGGTGACCGGATACGCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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| CDS CAA 90 bp | CCTTCATACAGTGGATCTTGGCATCATCAAACACCTGTGTGCATTTaGAGTAAGGGTTGCCCAGCTCGGAGTTGCACATATCACCAATAT | + |
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Preference number: 6 (lower is better) Translates to: PSYSGSWHHQTPVCI*SKGCPARSCTYHQY Trigger: ATATTGGTGATATGTGCAACTCCGAGCTGGGCAACCCTTACTCAAAATGCACACAGGTGTTTGATGATGCCAAGATCCACTGTATGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208216.2 |
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