Pregenerated sensors for DCPS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032040Ensembl transcript IDs: ENSMUST00000034539.12, ENSMUST00000119847.2, ENSMUST00000155139.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGTTCTCGATCACTTGAGCCAGCAGGTGTGCCCGCTCCACCCCTaGGCCCGGAGCCTCGAAGCCCAGAGCTGTGAAATGCACGTGCAG | + |
|
Preference number: 1 (lower is better) Translates to: QVLDHLSQQVCPLHP*ARSLEAQSCEMHVQ Trigger: CTGCACGTGCATTTCACAGCTCTGGGCTTCGAGGCTCCGGGCTCAGGGGTGGAGCGGGCACACCTGCTGGCTCAAGTGATCGAGAACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| 3UTR TCA 90 bp | GTGCCCGCTCCACCCCTGAGCCCGGAGCCTCGAAGCCCAGAGCTGTaGAATGCACGTGCAGGTGATAGTAAGAGGGCAGGTAGTGTAGGT | + |
|
Preference number: 1 (lower is better) Translates to: VPAPPLSPEPRSPEL*NARAGDSKRAGSVG Trigger: ACCTACACTACCTGCCCTCTTACTATCACCTGCACGTGCATTTCACAGCTCTGGGCTTCGAGGCTCCGGGCTCAGGGGTGGAGCGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGTTGATAGTGCTTGGGGTCACACTCCAGGTTCTCGATCACTTGAGCCAGCATGCCCGCTCCACCCCTaGGCCCGGAGCCTCGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: AVDSAWGHTPGSRSLEPACPLHP*ARSLEA Trigger: GGCTTCGAGGCTCCGGGCTCAGGGGTGGAGCGGGCA...TGCTGGCTCAAGTGATCGAGAACCTGGAGTGTGACCCCAAGCACTATCAACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCGCTGTTGATAGTGCTTGGGGTCACACTCCAGGTTCTCGATCACTTGAGCCAAAAACATCTTACACTTaGCCTTTGCTGAAAGGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: CAVDSAWGHTPGSRSLEPKTSYT*PLLKGR Trigger: TCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTTTT...TGGCTCAAGTGATCGAGAACCTGGAGTGTGACCCCAAGCACTATCAACAGCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCCCAGAGCTGTGAAATGCACGTGCAGGTGATAGTAAGAGGGCAGGTAGTGCGAGAAACTACAAAATaGATTTTAGGGAAATCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: EAQSCEMHVQVIVRGQVVRETTK*ILGKSL Trigger: AAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCG...CACTACCTGCCCTCTTACTATCACCTGCACGTGCATTTCACAGCTCTGGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| 3UTR TCA 72 bp | GATCACTTGAGCCAGCAGGTGTGCCCGCTCCACCCCTaGGCCCGGAGCCTCGAAGCCCAGAGCTGTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: DHLSQQVCPLHP*ARSLEAQSCEM Trigger: CATTTCACAGCTCTGGGCTTCGAGGCTCCGGGCTCAGGGGTGGAGCGGGCACACCTGCTGGCTCAAGTGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGCAGGAGCTGAAGCAGGGGGTCATCGGTCCTGAGGGCAAAAGTAAGAGTCAGGTTCTCGATCACTaGAGCCAGCAGGTGTGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: LLQELKQGVIGPEGKSKSQVLDH*SQQVCP Trigger: CGGGCACACCTGCTGGCTCAAGTGATCGAGAACCTG...ACTCTTACTTTTGCCCTCAGGACCGATGACCCCCTGCTTCAGCTCCTGCAGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGCTGTTGATAGTGCTTGGGGTCACACTCCAGGTTCTCGATCACTTGAGCCAGAAAAACATCTTACACTaGACCTTTGCTGAAAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: ALLIVLGVTLQVLDHLSQKNILH*TFAERP Trigger: CGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTTTTT...CTGGCTCAAGTGATCGAGAACCTGGAGTGTGACCCCAAGCACTATCAACAGCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | CACACTCCAGGTTCTCGATCACTTGAGCCAGCAGGTGTGCCCGCTCCACCCCTGATCAGGCGGAGGTCCTaGCGCATGTATTTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTPGSRSLEPAGVPAPPLIRRRS*RMYFCR Trigger: CCTGCAAAAATACATGCGTCAGGACCTCCGCCTGAT...CAGGGGTGGAGCGGGCACACCTGCTGGCTCAAGTGATCGAGAACCTGGAGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGGGTCACACTCCAGGTTCTCGATCACTTGAGCCAGCAGGTGTGCCCGCTCACCGCATCTTCTCCATaGGTATCCCCAGAGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVTLQVLDHLSQQVCPLTASSP*VSPESS Trigger: TGAGGACTCTGGGGATACTCATGGAGAAGATGCGGT...GAGCGGGCACACCTGCTGGCTCAAGTGATCGAGAACCTGGAGTGTGACCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGGTAGTGTAGGTACACTCGCAGACGGTCTCCTGTCACCTGGTAGCGCTTGGAGAACTGCAACTTaGGCTCAGGGCTCCCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RAGSVGTLADGLLSPGSAWRTAT*AQGSPL Trigger: TAACGGGGAGCCCTGAGCTCAAGTTGCAGTTCTCCA...AGCGCTACCAGGTGACAGGAGACCGTCTGCGAGTGTACCTACACTACCTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGGTAGTGTAGGTACACTCGCAGACGGTCTCCTGTCACCTGGTAGCGCTGCCACGTGTTCTACCTaGAATGGTGTCTTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAGSVGTLADGLLSPGSAATCST*NGVFSR Trigger: CCTGGAGAAGACACCATTTCAGGTAGAACACGTGGC...AGCGCTACCAGGTGACAGGAGACCGTCTGCGAGTGTACCTACACTACCTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCTGGAGTGAGATCTCGAAGTGATCTGATACCCCGGCGATGGCAGATGGCGACCGCATCTTCTCCATaGGTATCCCCAGAGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSGVRSRSDLIPRRWQMATASSP*VSPESS Trigger: TGAGGACTCTGGGGATACTCATGGAGAAGATGCGGT...CGCCATCTGCCATCGCCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155139.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCAGGAGCTGAAGCAGGGGGTCATCGGTCCTGAGGGCAAAAGTAAGAGTGGTTTCTGCCTCCTCTaGCTCCTGTTCGCGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQELKQGVIGPEGKSKSGFCLL*LLFALS Trigger: AGAAAGCGCGAACAGGAGGCAGAGGAGGCAGAAACC...ACTCTTACTTTTGCCCTCAGGACCGATGACCCCCTGCTTCAGCTCCTGCAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAGATGCTCTGGAGTGAGATCTCGAAGTGATCTGATACCCCGGCGATGGCTTCCTTCTCCTCTGTaGTGGGGGTTTCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRCSGVRSRSDLIPRRWLPSPL*WGFLPP Trigger: AGGAGGCAGAAACCCCCAGCACAGAGGAGAAGGAAG...CCATCGCCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCATCTGCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155139.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCCCAGAGCTGTGAAATGCACGTGCAGGTGATAGTAAGAGGGCAGGTAGTGGGGCAGAGGTGCCATTaGCAACGCCTGCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EAQSCEMHVQVIVRGQVVGQRCH*QRLLPS Trigger: AGAAGGAAGCAGGCGTTGGCAATGGCACCTCTGCCC...CACTACCTGCCCTCTTACTATCACCTGCACGTGCATTTCACAGCTCTGGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGTAGTGGCAGATGCTCTGGAGTGAGATCTCGAAGTGATCTGATACCCCGGGGGCAGAGGTGCCATTaGCAACGCCTGCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSGRCSGVRSRSDLIPRGQRCH*QRLLPS Trigger: AGAAGGAAGCAGGCGTTGGCAATGGCACCTCTGCCC...CCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCATCTGCCACTACTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155139.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGGTAGTGTAGGTACACTCGCAGACGGTCTCCTGTCACCTGGTAGCGCTCTCAGTAGTGGCAGATaGTCTGGAGTGAGATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RAGSVGTLADGLLSPGSALSSGR*SGVRSR Trigger: TCGAGATCTCACTCCAGAGCATCTGCCACTACTGAG...AGCGCTACCAGGTGACAGGAGACCGTCTGCGAGTGTACCTACACTACCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGTAGTGTAGGTACACTCGCAGACGGTCTCCTGTCACCTGGTAGCGCTGTTCCACTTGAGGTCTaGGATGAGGACAAAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RAGSVGTLADGLLSPGSAVPLEV*DEDKAI Trigger: GATGGCTTTGTCCTCATCCCAGACCTCAAGTGGAAC...AGCGCTACCAGGTGACAGGAGACCGTCTGCGAGTGTACCTACACTACCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | CACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCTGCCCGCTCCACCCCTaGGCCCGGAGCCTCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLTFAERPRNYKMHFREICPLHP*ARSLEA Trigger: GGCTTCGAGGCTCCGGGCTCAGGGGTGGAGCGGGCA...GATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS-3UTR GCA 90 bp | AGTAGTGGCAGATGCTCTGGAGTGAGATCTCGAAGTGATCTGATACCCCGGCGAGGTTTCTGCCTCCTCTaGCTCCTGTTCGCGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGRCSGVRSRSDLIPRRGFCLL*LLFALS Trigger: AGAAAGCGCGAACAGGAGGCAGAGGAGGCAGAAACC...TCGCCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCATCTGCCACTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155139.2 |
||
| CDS-3UTR GCA 90 bp | TGCGCTGTTGATAGTGCTTGGGGTCACACTCCAGGTTCTCGATCACTTGAGCCACTTCCTTCTCCTCTGTaGTGGGGGTTTCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CAVDSAWGHTPGSRSLEPLPSPL*WGFLPP Trigger: AGGAGGCAGAAACCCCCAGCACAGAGGAGAAGGAAG...TGGCTCAAGTGATCGAGAACCTGGAGTGTGACCCCAAGCACTATCAACAGCGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGGAGTGAGATCTCGAAGTGATCTGATACCCCGGCGATGGCAGATGGCGAGGTCATCAAGCTGCTaGTGGTTCCACTTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSGVRSRSDLIPRRWQMARSSSC*WFHLRS Trigger: AGACCTCAAGTGGAACCAGCAGCAGCTTGATGACCT...CGCCATCTGCCATCGCCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155139.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGATGCTCTGGAGTGAGATCTCGAAGTGATCTGATACCCCGGCGATGGCAGTACAGGTCATCAAGCTaGTGCTGGTTCCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRCSGVRSRSDLIPRRWQYRSSS*CWFHLR Trigger: CCTCAAGTGGAACCAGCAGCAGCTTGATGACCTGTA...CTGCCATCGCCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCATCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155139.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCCCAGAGCTGTGAAATGCACGTGCAGGTGATAGTAAGAGGGCAGGTAGTGCTGATACCCCGGCGATaGCAGATGGCGATCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: EAQSCEMHVQVIVRGQVVLIPRR*QMAIKY Trigger: GTATTTGATCGCCATCTGCCATCGCCGGGGTATCAG...CACTACCTGCCCTCTTACTATCACCTGCACGTGCATTTCACAGCTCTGGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| 3UTR CAA 72 bp | GTCATCGGTCCTGAGGGCAAAAGTAAGAGTGCGCTGTaGATAGTGCTTGGGGTCACACTCCAGGTTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VIGPEGKSKSAL*IVLGVTLQVLD Trigger: ATCGAGAACCTGGAGTGTGACCCCAAGCACTATCAACAGCGCACTCTTACTTTTGCCCTCAGGACCGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGTAAGAGTGCGCTGTTGATAGTGCTTGGGGTCACACTCCAGGTTCTCGATTGTGCTGGGGGTTTCTaGCTCCTCTGCCTCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSKSALLIVLGVTLQVLDCAGGF*LLCLLF Trigger: GAACAGGAGGCAGAGGAGGCAGAAACCCCCAGCACA...ATCGAGAACCTGGAGTGTGACCCCAAGCACTATCAACAGCGCACTCTTACTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | CTCGAAGCCCAGAGCTGTGAAATGCACGTGCAGGTGATAGTAAGAGGGCAGGTAAGGTCATCAAGCTGCTaGTGGTTCCACTTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEAQSCEMHVQVIVRGQVRSSSC*WFHLRS Trigger: AGACCTCAAGTGGAACCAGCAGCAGCTTGATGACCT...TACCTGCCCTCTTACTATCACCTGCACGTGCATTTCACAGCTCTGGGCTTCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | TGCGCTGTTGATAGTGCTTGGGGTCACACTCCAGGTTCTCGATCACTTGAGCCATTTTCCCATCCACCTTaGTCAGGCCTTTGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CAVDSAWGHTPGSRSLEPFSHPP*SGLCPS Trigger: GGAAGGACAAAGGCCTGAGCAAGGTGGATGGGAAAA...TGGCTCAAGTGATCGAGAACCTGGAGTGTGACCCCAAGCACTATCAACAGCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | AGAATGTTCCTCAGTAGTGGCAGATGCTCTGGAGTGAGATCTCGAAGTGATCTGGCCATTGCCAACGCCTaGTTCCTTCTCCTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RMFLSSGRCSGVRSRSDLAIANA*FLLLCA Trigger: AGCACAGAGGAGAAGGAAGCAGGCGTTGGCAATGGC...CAGATCACTTCGAGATCTCACTCCAGAGCATCTGCCACTACTGAGGAACATTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155139.2 |
||
| CDS-3UTR CCA 90 bp | CGGAGAATGTTCCTCAGTAGTGGCAGATGCTCTGGAGTGAGATCTCGAAGTGATTCATCAAGCTGCTGCTaGTTCCACTTGAGGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRMFLSSGRCSGVRSRSDSSSCC*FHLRSE Trigger: TTCAGACCTCAAGTGGAACCAGCAGCAGCTTGATGA...ATCACTTCGAGATCTCACTCCAGAGCATCTGCCACTACTGAGGAACATTCTCCG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155139.2 |
||
| CDS-3UTR TCA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAAGGTTCTCGATCACTTaGGCCAGCAGGTGTGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHLTFAERPRNYKMHFRERFSIT*ASRCAR Trigger: GCGGGCACACCTGCTGGCTCAAGTGATCGAGAACCT...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS-3UTR TCA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTGCCTTCTGCAGGAGCTaGAGCAGGGGGTCATCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NILHLTFAERPRNYKMHFAFCRS*SRGSSV Trigger: GACCGATGACCCCCTGCTTCAGCTCCTGCAGAAGGC...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS-3UTR TCA 90 bp | CACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCGAAGCCCAGAGCTGTaGAATGCACGTGCAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLTFAERPRNYKMHFREIRSPEL*NARAGD Trigger: ATCACCTGCACGTGCATTTCACAGCTCTGGGCTTCG...GATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS-3UTR GCA 90 bp | CACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCGCCATTGCCAACGCCTaGTTCCTTCTCCTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLTFAERPRNYKMHFREIAIANA*FLLLCA Trigger: AGCACAGAGGAGAAGGAAGCAGGCGTTGGCAATGGC...GATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAGGTTTCTGCCTCCTCTaGCTCCTGTTCGCGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLTFAERPRNYKMHFREGFCLL*LLFALS Trigger: AGAAAGCGCGAACAGGAGGCAGAGGAGGCAGAAACC...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAATGTGCTGGGGGTTTCTaGCTCCTCTGCCTCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKCAGGF*LLCLLF Trigger: GAACAGGAGGCAGAGGAGGCAGAAACCCCCAGCACA...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAACTTCCTTCTCCTCTGTaGTGGGGGTTTCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLTFAERPRNYKMHFRELPSPL*WGFLPP Trigger: AGGAGGCAGAAACCCCCAGCACAGAGGAGAAGGAAG...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAGCCATTGCCAACGCCTaGTTCCTTCTCCTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLTFAERPRNYKMHFREAIANA*FLLLCA Trigger: AGCACAGAGGAGAAGGAAGCAGGCGTTGGCAATGGC...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAAGGGCAGAGGTGCCATTaGCAACGCCTGCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKGQRCH*QRLLPS Trigger: AGAAGGAAGCAGGCGTTGGCAATGGCACCTCTGCCC...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCCGGCGATGGCAGATaGCGATCAAATACAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLTFAERPRNYKMHFREIPGDGR*RSNTGH Trigger: ATGACCTGTATTTGATCGCCATCTGCCATCGCCGGG...GATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAACCGCATCTTCTCCATaGGTATCCCCAGAGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHLTFAERPRNYKMHFRETASSP*VSPESS Trigger: TGAGGACTCTGGGGATACTCATGGAGAAGATGCGGT...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAATGGAGAACTGCAACTTaGGCTCAGGGCTCCCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKWRTAT*AQGSPL Trigger: TAACGGGGAGCCCTGAGCTCAAGTTGCAGTTCTCCA...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCAGGCGGAGGTCCTaGCGCATGTATTTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHLTFAERPRNYKMHFREIRRRS*RMYFCR Trigger: CCTGCAAAAATACATGCGTCAGGACCTCCGCCTGAT...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTGATCTCGAAGTGATCTaGTACCCCGGCGATGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NILHLTFAERPRNYKMHFDLEVI*YPGDGR Trigger: TCTGCCATCGCCGGGGTATCAGATCACTTCGAGATC...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTATGCTGGGAGTGACTTaGAGGGCTGAGACTTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NILHLTFAERPRNYKMHFMLGVT*RAETSA Trigger: TGCGGAAGTCTCAGCCCTTCAAGTCACTCCCAGCAT...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCTTCCGCAGGGCTCCTTaGAGAAGAAGAAAGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLTFAERPRNYKMHFREIFRRAP*RRRKHS Trigger: TGAGTGCTTTCTTCTTCTGCAAGGAGCCCTGCGGAA...GATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR CCA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAACCCGGCGATGGCAGATaGCGATCAAATACAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHLTFAERPRNYKMHFREPGDGR*RSNTGH Trigger: ATGACCTGTATTTGATCGCCATCTGCCATCGCCGGG...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CCA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTGGTAGCGCTTCAGGATaGCTTCTTGTCCTTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NILHLTFAERPRNYKMHFGSASG*LLVLPG Trigger: TCCGGGAAGGACAAGAAGCCATCCTGAAGCGCTACC...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAAGCCACGTGTTCTACCTaGAATGGTGTCTTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKATCST*NGVFSR Trigger: CCTGGAGAAGACACCATTTCAGGTAGAACACGTGGC...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAACCAGGTAGGGTAAGGTaGTGGTCCTGTAGTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKPGRVR*WSCSHL Trigger: GAGATGACTACAGGACCATCACCTTACCCTACCTGG...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR TCA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTCCAGGTAGGGTAAGGTaGTGGTCCTGTAGTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NILHLTFAERPRNYKMHFPGRVR*WSCSHL Trigger: GAGATGACTACAGGACCATCACCTTACCCTACCTGG...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAACTCAGTAGTGGCAGATaGTCTGGAGTGAGATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LHLTFAERPRNYKMHFRELSSGR*SGVRSR Trigger: TCGAGATCTCACTCCAGAGCATCTGCCACTACTGAG...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CCA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAGTTCCACTTGAGGTCTaGGATGAGGACAAAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LHLTFAERPRNYKMHFREVPLEV*DEDKAI Trigger: GATGGCTTTGTCCTCATCCCAGACCTCAAGTGGAAC...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAATCATCAAGCTGCTGCTaGTTCCACTTGAGGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKSSSCC*FHLRSG Trigger: CCCAGACCTCAAGTGGAACCAGCAGCAGCTTGATGA...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAACTGATACCCCGGCGATaGCAGATGGCGATCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKLIPRR*QMAIKY Trigger: GTATTTGATCGCCATCTGCCATCGCCGGGGTATCAG...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGTCATCAAGCTGCTaGTGGTTCCACTTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NILHLTFAERPRNYKMHFRSSSC*WFHLRS Trigger: AGACCTCAAGTGGAACCAGCAGCAGCTTGATGACCT...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTTACAGGTCATCAAGCTaGTGCTGGTTCCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NILHLTFAERPRNYKMHFYRSSS*CWFHLR Trigger: CCTCAAGTGGAACCAGCAGCAGCTTGATGACCTGTA...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAATACAGGTCATCAAGCTaGTGCTGGTTCCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKYRSSS*CWFHLR Trigger: CCTCAAGTGGAACCAGCAGCAGCTTGATGACCTGTA...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAAGCTGTTGATAGTGCTTaGGGTCACACTCCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKAVDSA*GHTPGS Trigger: AGAACCTGGAGTGTGACCCCAAGCACTATCAACAGC...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAAGCCATCAGAAGGGTCTaGGTTCTCAAAAACAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKGRETTKCILGKSLRDKAIRRV*VLKNNP Trigger: CGGATTGTTTTTGAGAACCCAGACCCTTCTGATGGC...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTATATCATTGGAGAACTaGAACTTGAGCTCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NILHLTFAERPRNYKMHFISLEN*NLSSGL Trigger: GAGCCCTGAGCTCAAGTTGCAGTTCTCCAATGATAT...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CCA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTATGTTATACACCCACTaGATGCTAAGGCTCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NILHLTFAERPRNYKMHFMLYTH*MLRLWD Trigger: ATCCCAGAGCCTTAGCATCCAGTGGGTGTATAACAT...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCGAAACAGGTTATAGGTaGTGTAGATATCATTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLTFAERPRNYKMHFREIETGYR*CRYHWR Trigger: TCTCCAATGATATCTACAGCACCTATAACCTGTTTC...GATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGGGTCACACTCCAGGTTCTCGATCACTTGAGCCAGCAGGTGTGCCCGCTCGGGGCAGAGGTGCCATaGCCAACGCCTGCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGVTLQVLDHLSQQVCPLGAEVP*PTPASF Trigger: GAAGGAAGCAGGCGTTGGCAATGGCACCTCTGCCCC...GAGCGGGCACACCTGCTGGCTCAAGTGATCGAGAACCTGGAGTGTGACCCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS GCA 90 bp | CAGGGGCAGAGGTGCCATTGCCAACGCCTGCTTCCTTCTCCTCTGTaGTGGGGGTTTCTGCCTCCTCTGCCTCCTGTTCGCGCTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGQRCHCQRLLPSPL*WGFLPPLPPVRAFS Trigger: AGAGAAAGCGCGAACAGGAGGCAGAGGAGGCAGAAACCCCCAGCACAGAGGAGAAGGAAGCAGGCGTTGGCAATGGCACCTCTGCCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 ENSMUST00000155139.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGGTAGTGTAGGTACACTCGCAGACGGTCTCCTGTCACCTGGTAGCGCTTGCTGCTGGTTCCACTaGAGGTCTGGGATGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RAGSVGTLADGLLSPGSACCWFH*RSGMRT Trigger: TGTCCTCATCCCAGACCTCAAGTGGAACCAGCAGCA...AGCGCTACCAGGTGACAGGAGACCGTCTGCGAGTGTACCTACACTACCTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | CACACTCCAGGTTCTCGATCACTTGAGCCAGCAGGTGTGCCCGCTCCACCCCTGTTTTTCCCATCCACCTaGCTCAGGCCTTTGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HTPGSRSLEPAGVPAPPLFFPST*LRPLSF Trigger: GAAGGACAAAGGCCTGAGCAAGGTGGATGGGAAAAA...CAGGGGTGGAGCGGGCACACCTGCTGGCTCAAGTGATCGAGAACCTGGAGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCTTCCCGGAGAATGTTCCTCAGTAGTGGCAGATGCTCTGGAGTGAGATCTGGGGCAGAGGTGCCATaGCCAACGCCTGCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPSRRMFLSSGRCSGVRSGAEVP*PTPASF Trigger: GAAGGAAGCAGGCGTTGGCAATGGCACCTCTGCCCC...AGATCTCACTCCAGAGCATCTGCCACTACTGAGGAACATTCTCCGGGAAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155139.2 |
||
| CDS GCA 90 bp | TCAGGCCTTTGTCCTTCCCGGAGAATGTTCCTCAGTAGTGGCAGATaGTCTGGAGTGAGATCTCGAAGTGATCTGATACCCCGGCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLCPSRRMFLSSGR*SGVRSRSDLIPRRW Trigger: CCATCGCCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCATCTGCCACTACTGAGGAACATTCTCCGGGAAGGACAAAGGCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS CCA 90 bp | TTCCGCAGGGCTCCTTGCAGAAGAAGAAAGCACTCAAGTTGGCGCTaGTTCCTTTTTCCCATCCACCTTGCTCAGGCCTTTGTCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FRRAPCRRRKHSSWR*FLFPIHLAQAFVLP Trigger: GGGAAGGACAAAGGCCTGAGCAAGGTGGATGGGAAAAAGGAACCAGCGCCAACTTGAGTGCTTTCTTCTTCTGCAAGGAGCCCTGCGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS GCA 90 bp | ATGGCTTCTTGTCCTTCCCGGAGAATGTTCCTCAGTAGTGGCAGATaGTCTGGAGTGAGATCTCGAAGTGATCTGATACCCCGGCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: MASCPSRRMFLSSGR*SGVRSRSDLIPRRW Trigger: CCATCGCCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCATCTGCCACTACTGAGGAACATTCTCCGGGAAGGACAAGAAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS-3UTR CAA 90 bp | CACACTCCAGGTTCTCGATCACTTGAGCCAGCAGGTGTGCCCGCTCCACCCCTGCAGGGTACACCACAGTaGTTTTTATATCACTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HTPGSRSLEPAGVPAPPLQGTPQ*FLYHSD Trigger: ATCTGAGTGATATAAAAACAACTGTGGTGTACCCTG...CAGGGGTGGAGCGGGCACACCTGCTGGCTCAAGTGATCGAGAACCTGGAGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS CCA 90 bp | AGATGCTCTGGAGTGAGATCTCGAAGTGATCTGATACCCCGGCGATaGCAGATGGCGATCAAATACAGGTCATCAAGCTGCTGCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCSGVRSRSDLIPRR*QMAIKYRSSSCCWF Trigger: GAACCAGCAGCAGCTTGATGACCTGTATTTGATCGCCATCTGCCATCGCCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTTGATAGTGCTTGGGGTCACACTCCAGGTTCTCGATCACTTGAGCCAGCATGCAGGAAAATAATTTaGTCCCGCGCAGACTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVDSAWGHTPGSRSLEPACRKII*SRADSL Trigger: CAGGGAGTCTGCGCGGGACAAAATTATTTTCCTGCA...TGCTGGCTCAAGTGATCGAGAACCTGGAGTGTGACCCCAAGCACTATCAACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS CCA 90 bp | GTTCCACTTGAGGTCTGGGATGAGGACAAAGCCATCAGAAGGGTCTaGGTTCTCAAAAACAATCCGGTCAGCTTCAGCCTTCTTGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPLEVWDEDKAIRRV*VLKNNPVSFSLLVK Trigger: CTTGACAAGAAGGCTGAAGCTGACCGGATTGTTTTTGAGAACCCAGACCCTTCTGATGGCTTTGTCCTCATCCCAGACCTCAAGTGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | TGCGCTGTTGATAGTGCTTGGGGTCACACTCCAGGTTCTCGATCACTTGAGCCATATCACTCAGATGCCTaGGAGGAAACAGGTTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: CAVDSAWGHTPGSRSLEPYHSDA*EETGYR Trigger: CCTATAACCTGTTTCCTCCAAGGCATCTGAGTGATA...TGGCTCAAGTGATCGAGAACCTGGAGTGTGACCCCAAGCACTATCAACAGCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS TCA 90 bp | AGGAACTTGGTAAATGGAAAAGATGCTGGGAGTGACTTGAAGGGCTaGGACTTCCGCAGGGCTCCTTGCAGAAGAAGAAAGCACTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RNLVNGKDAGSDLKG*DFRRAPCRRRKHSS Trigger: ACTTGAGTGCTTTCTTCTTCTGCAAGGAGCCCTGCGGAAGTCTCAGCCCTTCAAGTCACTCCCAGCATCTTTTCCATTTACCAAGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS CCA 90 bp | GATCAAATACAGGTCATCAAGCTGCTGCTGGTTCCACTTGAGGTCTaGGATGAGGACAAAGCCATCAGAAGGGTCTGGGTTCTCAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DQIQVIKLLLVPLEV*DEDKAIRRVWVLKN Trigger: GTTTTTGAGAACCCAGACCCTTCTGATGGCTTTGTCCTCATCCCAGACCTCAAGTGGAACCAGCAGCAGCTTGATGACCTGTATTTGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | CACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCAGGTTCTCGATCACTaGAGCCAGCAGGTGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HLTFAERPRNYKMHFREIQVLDH*SQQVCP Trigger: CGGGCACACCTGCTGGCTCAAGTGATCGAGAACCTG...GATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS CCA 90 bp | TCAGGCGGAGGTCCTGACGCATGTATTTTTGCAGGTGTTTCTCTGTaGCAGGGTACACCACAGTTGTTTTTATATCACTCAGATGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGGGPDACIFAGVSL*QGTPQLFLYHSDAL Trigger: CAAGGCATCTGAGTGATATAAAAACAACTGTGGTGTACCCTGCCACAGAGAAACACCTGCAAAAATACATGCGTCAGGACCTCCGCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTGGGGCAGAGGTGCCATaGCCAACGCCTGCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NILHLTFAERPRNYKMHFGAEVP*PTPASF Trigger: GAAGGAAGCAGGCGTTGGCAATGGCACCTCTGCCCC...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | CACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCTGCTGCTGGTTCCACTaGAGGTCTGGGATGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HLTFAERPRNYKMHFREICCWFH*RSGMRT Trigger: TGTCCTCATCCCAGACCTCAAGTGGAACCAGCAGCA...GATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAACTTCCGCAGGGCTCCTaGCAGAAGAAGAAAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LHLTFAERPRNYKMHFRELPQGS*QKKKAL Trigger: GAGTGCTTTCTTCTTCTGCAAGGAGCCCTGCGGAAG...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAACCTTGCTCAGGCCTTaGTCCTTCCCGGAGAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LHLTFAERPRNYKMHFRETLLRP*SFPENV Trigger: AACATTCTCCGGGAAGGACAAAGGCCTGAGCAAGGT...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTTGCAGGAAAATAATTTaGTCCCGCGCAGACTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NILHLTFAERPRNYKMHFCRKII*SRADSL Trigger: CAGGGAGTCTGCGCGGGACAAAATTATTTTCCTGCA...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | AACATCTTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTCTTCAGGATGGCTTCTaGTCCTTCCCGGAGAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: NILHLTFAERPRNYKMHFLQDGF*SFPENV Trigger: AACATTCTCCGGGAAGGACAAGAAGCCATCCTGAAG...AAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAAGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS-3UTR CAA 90 bp | CACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCTCAGCTTCAGCCTTCTaGTCAAGAATGTTATACACC | + |
|
Preference number: 5 (lower is better) Translates to: HLTFAERPRNYKMHFREISASAF*SRMLYT Trigger: GGTGTATAACATTCTTGACAAGAAGGCTGAAGCTGA...GATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAAAAGAAAGCACTCAAGTaGGCGCTGGTTCCTTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKGRETTKCILGKSLRDKKKALK*ALVPFS Trigger: GGAAAAAGGAACCAGCGCCAACTTGAGTGCTTTCTT...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAAATCCCTTAGAGATAAATATCACTCAGATGCCTaGGAGGAAACAGGTTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKGRETTKCILGKSLRDKYHSDA*EETGYR Trigger: CCTATAACCTGTTTCCTCCAAGGCATCTGAGTGATA...TTTATCTCTAAGGGATTTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAATCAGCTTCAGCCTTCTaGTCAAGAATGTTATACACC | + |
|
Preference number: 5 (lower is better) Translates to: LHLTFAERPRNYKMHFRESASAF*SRMLYT Trigger: GGTGTATAACATTCTTGACAAGAAGGCTGAAGCTGA...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS-3UTR CAA 90 bp | TTACACTTGACCTTTGCTGAAAGGCCGAGAAACTACAAAATGCATTTTAGGGAACAGGGTACACCACAGTaGTTTTTATATCACTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHLTFAERPRNYKMHFREQGTPQ*FLYHSD Trigger: ATCTGAGTGATATAAAAACAACTGTGGTGTACCCTG...TTCCCTAAAATGCATTTTGTAGTTTCTCGGCCTTTCAGCAAAGGTCAAGTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS TCA 72 bp | GGGCTCCCCGTTAGGAGCTGCGCCACGTGTTCTACCTaGAATGGTGTCTTCTCCAGGATCACAACCGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GLPVRSCATCST*NGVFSRITTAS Trigger: AGATGCGGTTGTGATCCTGGAGAAGACACCATTTCAGGTAGAACACGTGGCGCAGCTCCTAACGGGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS CCA 72 bp | GCAGACGGTCTCCTGTCACCTGGTAGCGCTTCAGGATaGCTTCTTGTCCTTCCCGGAGAATGTTCCTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: ADGLLSPGSASG*LLVLPGECSSV Trigger: TACTGAGGAACATTCTCCGGGAAGGACAAGAAGCCATCCTGAAGCGCTACCAGGTGACAGGAGACCGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034539.12 |
||
| CDS GCA 72 bp | CTCAAGTTGGCGCTGGTTCCTTTTTCCCATCCACCTTaGTCAGGCCTTTGTCCTTCCCGGAGAATGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LKLALVPFSHPP*SGLCPSRRMFL Trigger: GAGGAACATTCTCCGGGAAGGACAAAGGCCTGAGCAAGGTGGATGGGAAAAAGGAACCAGCGCCAACTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS CCA 72 bp | CAGGTCATCAAGCTGCTGCTGGTTCCACTTGAGGTCTaGGATGAGGACAAAGCCATCAGAAGGGTCTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QVIKLLLVPLEV*DEDKAIRRVWV Trigger: AACCCAGACCCTTCTGATGGCTTTGTCCTCATCCCAGACCTCAAGTGGAACCAGCAGCAGCTTGATGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS CCA 72 bp | CGCAGGGCTCCTTGCAGAAGAAGAAAGCACTCAAGTTaGCGCTGGTTCCTTTTTCCCATCCACCTTGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RRAPCRRRKHSS*RWFLFPIHLAQ Trigger: CTGAGCAAGGTGGATGGGAAAAAGGAACCAGCGCCAACTTGAGTGCTTTCTTCTTCTGCAAGGAGCCCTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS CAA 72 bp | CCGCAGGGCTCCTTGCAGAAGAAGAAAGCACTCAAGTaGGCGCTGGTTCCTTTTTCCCATCCACCTTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PQGSLQKKKALK*ALVPFSHPPCS Trigger: TGAGCAAGGTGGATGGGAAAAAGGAACCAGCGCCAACTTGAGTGCTTTCTTCTTCTGCAAGGAGCCCTGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS CAA 90 bp | CTGAGACTTCCGCAGGGCTCCTTGCAGAAGAAGAAAGCACTCAAGTaGGCGCTGGTTCCTTTTTCCCATCCACCTTGCTCAGGCCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRLPQGSLQKKKALK*ALVPFSHPPCSGLC Trigger: ACAAAGGCCTGAGCAAGGTGGATGGGAAAAAGGAACCAGCGCCAACTTGAGTGCTTTCTTCTTCTGCAAGGAGCCCTGCGGAAGTCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS TCA 72 bp | GGTGTCTTCTCCAGGATCACAACCGCATCTTCTCCATaGGTATCCCCAGAGTCCTCATTCACCTTCCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: GVFSRITTASSP*VSPESSFTFPC Trigger: GCATGGGAAGGTGAATGAGGACTCTGGGGATACTCATGGAGAAGATGCGGTTGTGATCCTGGAGAAGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 ENSMUST00000155139.2 |
||
| CDS CCA 72 bp | GGAGTGAGATCTCGAAGTGATCTGATACCCCGGCGATaGCAGATGGCGATCAAATACAGGTCATCAAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GVRSRSDLIPRR*QMAIKYRSSSC Trigger: GCAGCTTGATGACCTGTATTTGATCGCCATCTGCCATCGCCGGGGTATCAGATCACTTCGAGATCTCACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS CAA 72 bp | ACTCAAGTTGGCGCTGGTTCCTTTTTCCCATCCACCTaGCTCAGGCCTTTGTCCTTCCCGGAGAATGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TQVGAGSFFPST*LRPLSFPENVP Trigger: AGGAACATTCTCCGGGAAGGACAAAGGCCTGAGCAAGGTGGATGGGAAAAAGGAACCAGCGCCAACTTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS CCA 72 bp | GAGGTCTGGGATGAGGACAAAGCCATCAGAAGGGTCTaGGTTCTCAAAAACAATCCGGTCAGCTTCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EVWDEDKAIRRV*VLKNNPVSFSL Trigger: AAGGCTGAAGCTGACCGGATTGTTTTTGAGAACCCAGACCCTTCTGATGGCTTTGTCCTCATCCCAGACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS CCA 72 bp | GCTCCTTGCAGAAGAAGAAAGCACTCAAGTTGGCGCTaGTTCCTTTTTCCCATCCACCTTGCTCAGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: APCRRRKHSSWR*FLFPIHLAQAF Trigger: AAAGGCCTGAGCAAGGTGGATGGGAAAAAGGAACCAGCGCCAACTTGAGTGCTTTCTTCTTCTGCAAGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS TCA 72 bp | GTAAATGGAAAAGATGCTGGGAGTGACTTGAAGGGCTaGGACTTCCGCAGGGCTCCTTGCAGAAGAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VNGKDAGSDLKG*DFRRAPCRRRK Trigger: CTTTCTTCTTCTGCAAGGAGCCCTGCGGAAGTCTCAGCCCTTCAAGTCACTCCCAGCATCTTTTCCATTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119847.2 |
||
| CDS CAA 90 bp | ATCTCCAGTCTCTCGGATCAGGCGGAGGTCCTGACGCATGTATTTTaGCAGGTGTTTCTCTGTGGCAGGGTACACCACAGTTGTTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: ISSLSDQAEVLTHVF*QVFLCGRVHHSCFY Trigger: ATAAAAACAACTGTGGTGTACCCTGCCACAGAGAAACACCTGCAAAAATACATGCGTCAGGACCTCCGCCTGATCCGAGAGACTGGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS CAA 90 bp | GAAGGGTCTGGGTTCTCAAAAACAATCCGGTCAGCTTCAGCCTTCTaGTCAAGAATGTTATACACCCACTGGATGCTAAGGCTCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: EGSGFSKTIRSASAF*SRMLYTHWMLRLWD Trigger: ATCCCAGAGCCTTAGCATCCAGTGGGTGTATAACATTCTTGACAAGAAGGCTGAAGCTGACCGGATTGTTTTTGAGAACCCAGACCCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 |
||
| CDS CAA 72 bp | GAGTCCTCATTCACCTTCCCATGCAGGAAAATAATTTaGTCCCGCGCAGACTCCCTGAGCACTTTTTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: ESSFTFPCRKII*SRADSLSTFCT Trigger: AGTACAAAAAGTGCTCAGGGAGTCTGCGCGGGACAAAATTATTTTCCTGCATGGGAAGGTGAATGAGGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034539.12 ENSMUST00000119847.2 ENSMUST00000155139.2 |
||