Pregenerated sensors for DCPP3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057417

Ensembl transcript IDs: ENSMUST00000115428.2, ENSMUST00000234395.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TACCCCACCATTAGCTGGCGCGGCTGGGTGGTTGTAAAGACTATCTaGGTTAAAGCAGAAGGAGAGTATGAGCCTTCGACCCCAGTGATG	+
Preference number: 5 (lower is better) Translates to: YPTISWRGWVVVKTI*VKAEGEYEPSTPVM Trigger: CATCACTGGGGTCGAAGGCTCATACTCTCCTTCTGCTTTAACTCAGATAGTCTTTACAACCACCCAGCCGCGCCAGCTAATGGTGGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115428.2 ENSMUST00000234395.2
CDS TCA 72 bp	ATTAGCTGGCGCGGCTGGGTGGTTGTAAAGACTATCTaGGTTAAAGCAGAAGGAGAGTATGAGCCTTCGACC	+
Preference number: 6 (lower is better) Translates to: ISWRGWVVVKTI*VKAEGEYEPST Trigger: GGTCGAAGGCTCATACTCTCCTTCTGCTTTAACTCAGATAGTCTTTACAACCACCCAGCCGCGCCAGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115428.2 ENSMUST00000234395.2
CDS GCA 72 bp	ACTTCCCCACAAAAACAAGATACTCTTTATGCCACCTaGCCTCCAAGAGACACAAGCTCCCTTGAGCACAAA	+
Preference number: 6 (lower is better) Translates to: TSPQKQDTLYAT*PPRDTSSLEHK Trigger: TTTGTGCTCAAGGGAGCTTGTGTCTCTTGGAGGGCAGGTGGCATAAAGAGTATCTTGTTTTTGTGGGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115428.2 ENSMUST00000234395.2

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