Pregenerated sensors for DCPP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096445

Ensembl transcript IDs: ENSMUST00000068580.4

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TTCCAACTTCTGGACCATGATAATCTTGTGTCAAAACGGTGGGGGTaGCCAAGAAGGCAAGAATCAGTAAGGCCAGCATGGCCTCCAGCT	+
Preference number: 5 (lower is better) Translates to: FQLLDHDNLVSKRWG*PRRQESVRPAWPPA Trigger: AGCTGGAGGCCATGCTGGCCTTACTGATTCTTGCCTTCTTGGGCACCCCCACCGTTTTGACACAAGATTATCATGGTCCAGAAGTTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068580.4
CDS GCA 72 bp	ACTTCCCCACAAAAACAAGATACTCTTTATGCCACCTaGCCTCCAAGAGACACAAGCTCCCTTGAGCACATG	+
Preference number: 6 (lower is better) Translates to: TSPQKQDTLYAT*PPRDTSSLEHM Trigger: CATGTGCTCAAGGGAGCTTGTGTCTCTTGGAGGGCAGGTGGCATAAAGAGTATCTTGTTTTTGTGGGGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068580.4
CDS CCA 72 bp	CAACTTCTGGACCATGATAATCTTGTGTCAAAACGGTaGGGGTGCCCAAGAAGGCAAGAATCAGTAAGGCCA	+
Preference number: 6 (lower is better) Translates to: QLLDHDNLVSKR*GCPRRQESVRP Trigger: TGGCCTTACTGATTCTTGCCTTCTTGGGCACCCCCACCGTTTTGACACAAGATTATCATGGTCCAGAAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068580.4
CDS CAA 72 bp	GGCTACCATTTCCTTCCCGGCAGTAGAGCCATACACTaGACCGTCCTTGTTGTCATCATAGTTGAGCTGAAT	+
Preference number: 6 (lower is better) Translates to: GYHFLPGSRAIH*TVLVVIIVELN Trigger: ATTCAGCTCAACTATGATGACAACAAGGACGGTCAAGTGTATGGCTCTACTGCCGGGAAGGAAATGGTAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068580.4
CDS CAA 90 bp	AGACAGTCTGGCTACCATTTCCTTCCCGGCAGTAGAGCCATACACTaGACCGTCCTTGTTGTCATCATAGTTGAGCTGAATTCCAACAAT	+
Preference number: 6 (lower is better) Translates to: RQSGYHFLPGSRAIH*TVLVVIIVELNSNN Trigger: ATTGTTGGAATTCAGCTCAACTATGATGACAACAAGGACGGTCAAGTGTATGGCTCTACTGCCGGGAAGGAAATGGTAGCCAGACTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068580.4

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