Pregenerated sensors for DCP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024472Ensembl transcript IDs: ENSMUST00000025350.10
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGCAGAGTCCTGCAGGACCAGCCCATGCTCTCCCAAGGCACCGTaGACGTCACGTGTCCTATCCACTGCCGCTCACACTCCACAAGTA | + |
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Preference number: 1 (lower is better) Translates to: NAESCRTSPCSPKAP*TSRVLSTAAHTPQV Trigger: TACTTGTGGAGTGTGAGCGGCAGTGGATAGGACACGTGACGTGCACGGTGCCTTGGGAGAGCATGGGCTGGTCCTGCAGGACTCTGCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | ATGGCCTCCCTGCACTTCTTTCAGATACCTGAGAAAGGTAAGGCTTaGGGAGACAGCCACTCACACGCAACAGGTCTCAGATCGAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: MASLHFFQIPEKGKA*GDSHSHATGLRSRD Trigger: GTCCCTCGATCTGAGACCTGTTGCGTGTGAGTGGCTGTCTCCTCAAGCCTTACCTTTCTCAGGTATCTGAAAGAAGTGCAGGGAGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | GACATTCAAACACAGCCTAAAATGTGCTGCACAGTCACAGTGAAATaGAGAGTCCTGCAGGACCAGCCCATGCTCTCCCAAGGCACCGTG | + |
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Preference number: 1 (lower is better) Translates to: DIQTQPKMCCTVTVK*RVLQDQPMLSQGTV Trigger: CACGGTGCCTTGGGAGAGCATGGGCTGGTCCTGCAGGACTCTGCATTTCACTGTGACTGTGCAGCACATTTTAGGCTGTGTTTGAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | GACAGCAAACATCAGAGCTCAATATCCACAGCATCAGCTCCCCACTaGCTCCATCTCTCTCCAGGCTGTGGATGTGGTCCTGATGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: DSKHQSSISTASAPH*LHLSPGCGCGPDEV Trigger: CACTTCATCAGGACCACATCCACAGCCTGGAGAGAGATGGAGTCAGTGGGGAGCTGATGCTGTGGATATTGAGCTCTGATGTTTGCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | AATGCCTGGAAAGAACTGCATGCTCAATTCTGCTTGGGCAGGGGGTaGCCACATTTCTCCCCTGAGCATCCTTCCAGGAAGCACTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: NAWKELHAQFCLGRG*PHFSPEHPSRKHSS Trigger: ACTTGAGTGCTTCCTGGAAGGATGCTCAGGGGAGAAATGTGGTCACCCCCTGCCCAAGCAGAATTGAGCATGCAGTTCTTTCCAGGCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACAATaGTTTCTTGGTGACAGTCAGGGAGTGACAGTGGCTCACTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: LSLSLSLSLTHTHTQ*FLGDSQGVTVAHCQ Trigger: CTGGCAGTGAGCCACTGTCACTCCCTGACTGTCACCAAGAAACCATTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | TGTGAGACATTCAAACACAGCCTAAAATGTGCTGCACAGTCACAGTaGAATGCAGAGTCCTGCAGGACCAGCCCATGCTCTCCCAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: CETFKHSLKCAAQSQ*NAESCRTSPCSPKA Trigger: TGCCTTGGGAGAGCATGGGCTGGTCCTGCAGGACTCTGCATTTCACTGTGACTGTGCAGCACATTTTAGGCTGTGTTTGAATGTCTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | CCCAGAAGAGATTCTCAGCGAGGTCAGGGGCAGCCAACATCATATTaGCTCCTTAAAGCTCTGGTGATTGTCCTCAACAACAGGCGATCT | + |
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Preference number: 1 (lower is better) Translates to: PRRDSQRGQGQPTSY*LLKALVIVLNNRRS Trigger: AGATCGCCTGTTGTTGAGGACAATCACCAGAGCTTTAAGGAGGCAATATGATGTTGGCTGCCCCTGACCTCGCTGAGAATCTCTTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | CATTTCTCCCCTGAGCATCCTTCCAGGAAGCACTCAAGTGCCAAATaGGTAGTAGTTTCTTCCTCACTCCTCCCAGCAACTGCTATCTGT | + |
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Preference number: 1 (lower is better) Translates to: HFSPEHPSRKHSSAK*VVVSSSLLPATAIC Trigger: ACAGATAGCAGTTGCTGGGAGGAGTGAGGAAGAAACTACTACGCATTTGGCACTTGAGTGCTTCCTGGAAGGATGCTCAGGGGAGAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | TCAGCTATTGCTTCCATGCTCTCTGCTCCAGCACTCACAGGTTTTTaGCAGCAAACATCAGAGCTCAATATCCACAGCATCAGCTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: SAIASMLSAPALTGF*QQTSELNIHSISSP Trigger: TGGGGAGCTGATGCTGTGGATATTGAGCTCTGATGTTTGCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGCAATAGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | GAGAGTCAAGGCATGACCTGGAGTAACTGTCAGCTATTGCTTCCATaGTCTCTGCTCCAGCACTCACAGGTTTTTGACAGCAAACATCAG | + |
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Preference number: 1 (lower is better) Translates to: ESQGMTWSNCQLLLP*SLLQHSQVFDSKHQ Trigger: CTGATGTTTGCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGCAATAGCTGACAGTTACTCCAGGTCATGCCTTGACTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | GCTGTAGAGTACTTCAGTGACAAATGCTGTTTGTCACAAGGAAAGTaGTGCCAGCATTTGCACATGACTGTGCAACACTCTGGGCTACCT | + |
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Preference number: 1 (lower is better) Translates to: AVEYFSDKCCLSQGK*CQHLHMTVQHSGLP Trigger: AGGTAGCCCAGAGTGTTGCACAGTCATGTGCAAATGCTGGCAGCACTTTCCTTGTGACAAACAGCATTTGTCACTGAAGTACTCTACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | ACACAATGGTTTCTTGGTGACAGTCAGGGAGTGACAGTGGCTCACTaGCAGGCAAGCTTCAGTTTTCACTCCCTTAACCATTTAACAGAA | + |
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Preference number: 1 (lower is better) Translates to: TQWFLGDSQGVTVAH*QASFSFHSLNHLTE Trigger: TTCTGTTAAATGGTTAAGGGAGTGAAAACTGAAGCTTGCCTGGCAGTGAGCCACTGTCACTCCCTGACTGTCACCAAGAAACCATTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | GTATTCGACAGAAAGCCAGCGTGGGTGGCCTTCCATCACTGTCAGTaGATTCTTTACAGTATGGTTTTAGCTCCTAAACTAGTGTGCATC | + |
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Preference number: 1 (lower is better) Translates to: VFDRKPAWVAFHHCQ*ILYSMVLAPKLVCI Trigger: GATGCACACTAGTTTAGGAGCTAAAACCATACTGTAAAGAATGCACTGACAGTGATGGAAGGCCACCCACGCTGGCTTTCTGTCGAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | ACAAATGCTGTTTGTCACAAGGAAAGTGCTGCCAGCATTTGCACATaGCTGTGCAACACTCTGGGCTACCTTGTTATCAACAACAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: TNAVCHKESAASICT*LCNTLGYLVINNRE Trigger: CTCTCTGTTGTTGATAACAAGGTAGCCCAGAGTGTTGCACAGTCATGTGCAAATGCTGGCAGCACTTTCCTTGTGACAAACAGCATTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | AAAGTGTTTTCTGTGCTCCCACACCAATTTCACAGCTATAGACACTaGCTTGAGAGAACACAGCCCTTTTATCTACTTGAGGCTCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KVFSVLPHQFHSYRH*LERTQPFYLLEAQE Trigger: CTCCTGAGCCTCAAGTAGATAAAAGGGCTGTGTTCTCTCAAGTCAGTGTCTATAGCTGTGAAATTGGTGTGGGAGCACAGAAAACACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | GAAAGCACCCTACCTTCTACTTTAAAAGCTCACTATCCTAAGAACTaGGTGTTAGGAAATGCTGCCCGTTCCACTCTAAAGCTACCAACG | + |
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Preference number: 1 (lower is better) Translates to: ESTLPSTLKAHYPKN*VLGNAARSTLKLPT Trigger: CGTTGGTAGCTTTAGAGTGGAACGGGCAGCATTTCCTAACACTCAGTTCTTAGGATAGTGAGCTTTTAAAGTAGAAGGTAGGGTGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | CGTTCCACTCTAAAGCTACCAACGAGAACCTCAAAGTGTTTTCTGTaGTCCCACACCAATTTCACAGCTATAGACACTGACTTGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: RSTLKLPTRTSKCFL*SHTNFTAIDTDLRE Trigger: TTCTCTCAAGTCAGTGTCTATAGCTGTGAAATTGGTGTGGGAGCACAGAAAACACTTTGAGGTTCTCGTTGGTAGCTTTAGAGTGGAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | CTGAGTCTCCATTATTCAATGGCTGTAGAGTACTTCAGTGACAAATaGTGTTTGTCACAAGGAAAGTGCTGCCAGCATTTGCACATGACT | + |
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Preference number: 1 (lower is better) Translates to: LSLHYSMAVEYFSDK*CLSQGKCCQHLHMT Trigger: AGTCATGTGCAAATGCTGGCAGCACTTTCCTTGTGACAAACAGCATTTGTCACTGAAGTACTCTACAGCCATTGAATAATGGAGACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR CCA 90 bp | CTGAGCACTGCAAAGGCTGTGCTAAATGCCTTAAAGCTTGAGAAATaGCTTTTAAAATGTCCAACTGTGTCCCAAATGCTTCACCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: LSTAKAVLNALKLEK*LLKCPTVSQMLHQS Trigger: AGACTGGTGAAGCATTTGGGACACAGTTGGACATTTTAAAAGCCATTTCTCAAGCTTTAAGGCATTTAGCACAGCCTTTGCAGTGCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | CAGCTCCTTCTTGGATTCTTGCATTTGACACTTAACAGTAACTTGTaGGACATTCAAACACAGCCTAAAATGTGCTGCACAGTCACAGTG | + |
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Preference number: 1 (lower is better) Translates to: QLLLGFLHLTLNSNL*DIQTQPKMCCTVTV Trigger: CACTGTGACTGTGCAGCACATTTTAGGCTGTGTTTGAATGTCTCACAAGTTACTGTTAAGTGTCAAATGCAAGAATCCAAGAAGGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 90 bp | AAGTGCCAAATGCGTAGTAGTTTCTTCCTCACTCCTCCCAGCAACTaGTATCTGTTCTTTTCAAGATCCTTTCCCACAACACACTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: KCQMRSSFFLTPPSN*YLFFSRSFPTTHLK Trigger: TTTTAAGTGTGTTGTGGGAAAGGATCTTGAAAAGAACAGATAGCAGTTGCTGGGAGGAGTGAGGAAGAAACTACTACGCATTTGGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR CCA 90 bp | TCAACAACAGGCGATCTCTGCAAAGTGGGCACTGTCACCCGTGTTTaGTTTAAGAATTCTGAAGGAGCAAAATACAAAATACATTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: STTGDLCKVGTVTRV*FKNSEGAKYKIHSY Trigger: GTAGGAATGTATTTTGTATTTTGCTCCTTCAGAATTCTTAAACCAAACACGGGTGACAGTGCCCACTTTGCAGAGATCGCCTGTTGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR CCA 90 bp | GACCACAATCCCTCTGACAGTTCTGGGCAACTATCTTTCACATATTaGTACAGAAATCTAGTTAGCTCTTTCAACATGGCTCACCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: DHNPSDSSGQLSFTY*YRNLVSSFNMAHQV Trigger: AACTTGGTGAGCCATGTTGAAAGAGCTAACTAGATTTCTGTACCAATATGTGAAAGATAGTTGCCCAGAACTGTCAGAGGGATTGTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR CCA 90 bp | CAGGCAAGCTTCAGTTTTCACTCCCTTAACCATTTAACAGAAATCTaGAATGCTGGGACCAATTATAAATATGGCTCAAGAAGACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: QASFSFHSLNHLTEI*NAGTNYKYGSRRPK Trigger: CTTGGGTCTTCTTGAGCCATATTTATAATTGGTCCCAGCATTCCAGATTTCTGTTAAATGGTTAAGGGAGTGAAAACTGAAGCTTGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR CCA 90 bp | CATAGAGATTTCTATAGTACTATTTATAAGCAGAGATATACTTTGTaGATACCACTTGTTAAAACCGCACACGACAGACGCACGTGTACA | + |
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Preference number: 1 (lower is better) Translates to: HRDFYSTIYKQRYTL*IPLVKTAHDRRTCT Trigger: TGTACACGTGCGTCTGTCGTGTGCGGTTTTAACAAGTGGTATCCACAAAGTATATCTCTGCTTATAAATAGTACTATAGAAATCTCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 90 bp | CCAACGAGCTATTTTGGGGGTTCCTCTTTGGTTTCCCTAAATGTTTaGCTAATAACTACAGTAAAGCAAATACTTTCCTATTATCATAGA | + |
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Preference number: 1 (lower is better) Translates to: PTSYFGGSSLVSLNV*LITTVKQILSYYHR Trigger: TCTATGATAATAGGAAAGTATTTGCTTTACTGTAGTTATTAGTCAAACATTTAGGGAAACCAAAGAGGAACCCCCAAAATAGCTCGTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR TCA 90 bp | TCGGACACCGACCTCATGGCCGCGCCTCTGCTTGCATTCGCGCCTCTGCTGAGCGCATCAGCTCCCCACTaGCTCCATCTCTCTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SDTDLMAAPLLAFAPLLSASAPH*LHLSPG Trigger: GCCTGGAGAGAGATGGAGTCAGTGGGGAGCTGATGC...GCTCAGCAGAGGCGCGAATGCAAGCAGAGGCGCGGCCATGAGGTCGGTGTCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR TCA 90 bp | TCGGACACCGACCTCATGGCCGCGCCTCTGCTTGCATTCGCGCCTCTGCTGAGCGCACCAGGGACTGACTaGAGTGCTCACTTAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SDTDLMAAPLLAFAPLLSAPGTD*SAHLRR Trigger: TCTTCTTAAGTGAGCACTTCAGTCAGTCCCTGGTGC...GCTCAGCAGAGGCGCGAATGCAAGCAGAGGCGCGGCCATGAGGTCGGTGTCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCGACACACTTTTTCTGACCTCCCTGGGCACCACAGGCACACATGTGGTATAGTGACAGTCAGGGAGTaGCAGTGGCTCACTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: IRHTFSDLPGHHRHTCGIVTVRE*QWLTAR Trigger: CCTGGCAGTGAGCCACTGTCACTCCCTGACTGTCAC...TATACCACATGTGTGCCTGTGGTGCCCAGGGAGGTCAGAAAAAGTGTGTCGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR GCA 90 bp | TCGGACACCGACCTCATGGCCGCGCCTCTGCTTGCATTCGCGCCTCTGCTGAGCTACTTCAGTGACAAATaGTGTTTGTCACAAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SDTDLMAAPLLAFAPLLSYFSDK*CLSQGK Trigger: CTTTCCTTGTGACAAACAGCATTTGTCACTGAAGTA...GCTCAGCAGAGGCGCGAATGCAAGCAGAGGCGCGGCCATGAGGTCGGTGTCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR CCA 90 bp | TCGGACACCGACCTCATGGCCGCGCCTCTGCTTGCATTCGCGCCTCTGCTGAGCCCACAGGCACACATGTaGTATACAAACAAATATACA | + |
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Preference number: 2 (lower is better) Translates to: SDTDLMAAPLLAFAPLLSPQAHM*YTNKYT Trigger: TGTATATTTGTTTGTATACCACATGTGTGCCTGTGG...GCTCAGCAGAGGCGCGAATGCAAGCAGAGGCGCGGCCATGAGGTCGGTGTCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR CAA 90 bp | CGGAGGCAGGAGAGTCAAGGCATGACCTGGAGTAACTGTCAGCTATaGCTTCCATGCTCTCTGCTCCAGCACTCACAGGTTTTTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: RRQESQGMTWSNCQL*LPCSLLQHSQVFDS Trigger: GCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGCAATAGCTGACAGTTACTCCAGGTCATGCCTTGACTCTCCTGCCTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR TCA 90 bp | CACTGTGCAGCTCCAGTTGGAAGGTTAGACTCTCAGTGGTTAGAGGCAGAGATGGAGAAAGGTAAGGCTTaGGGAGACAGCCACTCACAC | + |
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Preference number: 2 (lower is better) Translates to: HCAAPVGRLDSQWLEAEMEKGKA*GDSHSH Trigger: GTGTGAGTGGCTGTCTCCTCAAGCCTTACCTTTCTC...CATCTCTGCCTCTAACCACTGAGAGTCTAACCTTCCAACTGGAGCTGCACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR CAA 90 bp | GTCAGCTATTGCTTCCATGCTCTCTGCTCCAGCACTCACAGGTTTTaGACAGCAAACATCAGAGCTCAATATCCACAGCATCAGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: VSYCFHALCSSTHRF*TANIRAQYPQHQLP Trigger: GGGGAGCTGATGCTGTGGATATTGAGCTCTGATGTTTGCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGCAATAGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGAGGGCCTGGGTTCCATTTCCAATTGCTCTGAACCCCAGTTCCGGGGGCATTTAACAGAAATCTaGAATGCTGGGACCAATTAT | + |
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Preference number: 2 (lower is better) Translates to: LAEGLGSISNCSEPQFRGHLTEI*NAGTNY Trigger: ATAATTGGTCCCAGCATTCCAGATTTCTGTTAAATG...CCCCCGGAACTGGGGTTCAGAGCAATTGGAAATGGAACCCAGGCCCTCTGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCGACACACTTTTTCTGACCTCCCTGGGCACCACAGGCACACATGTGGTATAATCTCTTTAGAAACATaGCCTCCCTGCACTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: IRHTFSDLPGHHRHTCGIISLET*PPCTSF Trigger: GAAAGAAGTGCAGGGAGGCCATGTTTCTAAAGAGAT...TATACCACATGTGTGCCTGTGGTGCCCAGGGAGGTCAGAAAAAGTGTGTCGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR TCA 90 bp | CACTCCTCCCAGCAACTGCTATCTGTTCTTTTCAAGATCCTTTCCCACAACACAGCACTCACAGGTTTTTaGCAGCAAACATCAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: HSSQQLLSVLFKILSHNTALTGF*QQTSEL Trigger: GAGCTCTGATGTTTGCTGTCAAAAACCTGTGAGTGC...TGTGTTGTGGGAAAGGATCTTGAAAAGAACAGATAGCAGTTGCTGGGAGGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAACATCATATTGCCTCCTTAAAGCTCTGGTGATTGTCCTCAACAACAGGGAAACATGGCCTCCCTaGACTTCTTTCAGATACCTG | + |
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Preference number: 2 (lower is better) Translates to: QPTSYCLLKALVIVLNNRETWPP*TSFRYL Trigger: CAGGTATCTGAAAGAAGTGCAGGGAGGCCATGTTTC...CCTGTTGTTGAGGACAATCACCAGAGCTTTAAGGAGGCAATATGATGTTGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR GCA 90 bp | GGAATGCTGGGACCAATTATAAATATGGCTCAAGAAGACCCAAGCAAAGCAGCTACGCACGTGTACACATaGACTCTAACAGCACAGTCC | + |
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Preference number: 2 (lower is better) Translates to: GMLGPIINMAQEDPSKAATHVYT*TLTAQS Trigger: GGACTGTGCTGTTAGAGTGCATGTGTACACGTGCGT...AGCTGCTTTGCTTGGGTCTTCTTGAGCCATATTTATAATTGGTCCCAGCATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR GCA 90 bp | TTAGCTCTTTCAACATGGCTCACCAAGTTTTCCAAGCTATCCGATCTATTGGGTTGCTTCCATGCTCTCTaGTCCAGCACTCACAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LALSTWLTKFSKLSDLLGCFHAL*SSTHRF Trigger: AAACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGCA...ACCCAATAGATCGGATAGCTTGGAAAACTTGGTGAGCCATGTTGAAAGAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGGATACCACTTGTTAAAACCGCACACGACAGACGCACGTGTACACATGCACCAGGCAACTAAAACTTaGTTCCAAACACTGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: CGYHLLKPHTTDARVHMHQATKT*FQTLKW Trigger: CCATTTCAGTGTTTGGAACCAAGTTTTAGTTGCCTG...GTGCATGTGTACACGTGCGTCTGTCGTGTGCGGTTTTAACAAGTGGTATCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR CCA 90 bp | CACTCCTCCCAGCAACTGCTATCTGTTCTTTTCAAGATCCTTTCCCACAACACACTGCCTCAGAGAACATaGACACAACAGCTGTCATTA | + |
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Preference number: 2 (lower is better) Translates to: HSSQQLLSVLFKILSHNTLPQRT*TQQLSL Trigger: TAATGACAGCTGTTGTGTCCATGTTCTCTGAGGCAG...TGTGTTGTGGGAAAGGATCTTGAAAAGAACAGATAGCAGTTGCTGGGAGGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR-3UTR CCA 90 bp | CACAGATCAACGTTGAGATGCAATATAGAACTAAGAATGAAGTTTTCCACACAGCTGTGCAGCTCCAGTTaGAAGGTTAGACTCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: HRSTLRCNIELRMKFSTQLCSSS*KVRLSV Trigger: CACTGAGAGTCTAACCTTCCAACTGGAGCTGCACAG...CTGTGTGGAAAACTTCATTCTTAGTTCTATATTGCATCTCAACGTTGATCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR CAA 90 bp | TCTATAGTACTATTTATAAGCAGAGATATACTTTGTGGATACCACTaGTTAAAACCGCACACGACAGACGCACGTGTACACATGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: SIVLFISRDILCGYH*LKPHTTDARVHMHS Trigger: AGAGTGCATGTGTACACGTGCGTCTGTCGTGTGCGGTTTTAACAAGTGGTATCCACAAAGTATATCTCTGCTTATAAATAGTACTATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR GCA 72 bp | TGTCGGGTCACCCCACATCTTTGGAAGGGCGGTGGGTaGTCCAGCATCACTAATTCACAGACCCGAGTCACT | + |
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Preference number: 3 (lower is better) Translates to: CRVTPHLWKGGG*SSITNSQTRVT Trigger: AGTGACTCGGGTCTGTGAATTAGTGATGCTGGAGCACCCACCGCCCTTCCAAAGATGTGGGGTGACCCGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| 3UTR TCA 72 bp | CATCAGAGCTCAATATCCACAGCATCAGCTCCCCACTaGCTCCATCTCTCTCCAGGCTGTGGATGTGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HQSSISTASAPH*LHLSPGCGCGP Trigger: AGGACCACATCCACAGCCTGGAGAGAGATGGAGTCAGTGGGGAGCTGATGCTGTGGATATTGAGCTCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | ATCTCTCTCCAGGCTGTGGATGTGGTCCTGATGAAGTaGTCGAGGTTCACTGTGCAGCTCCAGTTGGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ISLQAVDVVLMK*SRFTVQLQLEG Trigger: ACCTTCCAACTGGAGCTGCACAGTGAACCTCGAGCACTTCATCAGGACCACATCCACAGCCTGGAGAGAGAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | CTGAACGGACGGAGGCAGGAGAGTCAAGGCATGACCTaGAGTAACTGTCAGCTATTGCTTCCATGCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LNGRRQESQGMT*SNCQLLLPCSL Trigger: CAGAGAGCATGGAAGCAATAGCTGACAGTTACTCCAGGTCATGCCTTGACTCTCCTGCCTCCGTCCGTTCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | ATGTTACAGCACAGGTGTCGGGTCACCCCACATCTTTaGAAGGGCGGTGGGTGCTCCAGCATCACTAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: MLQHRCRVTPHL*KGGGCSSITNS Trigger: TGAATTAGTGATGCTGGAGCACCCACCGCCCTTCCAAAGATGTGGGGTGACCCGACACCTGTGCTGTAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | GGAGGGGCAATAGGACACTCTGCTGGACATTCTGCCTaGTTCTGGCTCAAGCCTAAGAACCACTGCACGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GGAIGHSAGHSA*FWLKPKNHCTL Trigger: TAACGTGCAGTGGTTCTTAGGCTTGAGCCAGAACCAGGCAGAATGTCCAGCAGAGTGTCCTATTGCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCAGAGGGCCTGGGTTCCATTTCCAATTGCTCTGAACCCCAGTTCCGGGGGAACCATGCCCTTGCTTaGTTCCACAGTGCATTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LAEGLGSISNCSEPQFRGNHALA*FHSALN Trigger: ATTTAATGCACTGTGGAACAAAGCAAGGGCATGGTT...CCCCCGGAACTGGGGTTCAGAGCAATTGGAAATGGAACCCAGGCCCTCTGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | AAAGAACTGCATGCTCAATTCTGCTTGGGCAGGGGGTaGCCACATTTCTCCCCTGAGCATCCTTCCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KELHAQFCLGRG*PHFSPEHPSRK Trigger: CTTCCTGGAAGGATGCTCAGGGGAGAAATGTGGTCACCCCCTGCCCAAGCAGAATTGAGCATGCAGTTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | ACACAGCCTAAAATGTGCTGCACAGTCACAGTGAAATaGAGAGTCCTGCAGGACCAGCCCATGCTCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TQPKMCCTVTVK*RVLQDQPMLSQ Trigger: TTGGGAGAGCATGGGCTGGTCCTGCAGGACTCTGCATTTCACTGTGACTGTGCAGCACATTTTAGGCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | GAACCACTGCACGTTACAGGTCGGATTTTTATCTCCTaGCCACCACTGTACTGCAGCTTAAGAGCCAAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: EPLHVTGRIFIS*PPLYCSLRAKP Trigger: CGGCTTGGCTCTTAAGCTGCAGTACAGTGGTGGGCAGGAGATAAAAATCCGACCTGTAACGTGCAGTGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | CACACACACAATGGTTTCTTGGTGACAGTCAGGGAGTaGCAGTGGCTCACTGCCAGGCAAGCTTCAGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HTHNGFLVTVRE*QWLTARQASVF Trigger: GAAAACTGAAGCTTGCCTGGCAGTGAGCCACTGTCACTCCCTGACTGTCACCAAGAAACCATTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | CCACCACTGTACTGCAGCTTAAGAGCCAAGCCGACCTaGGATAAAGGTGACATTCCCACAGGCCACTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PPLYCSLRAKPT*DKGDIPTGHFH Trigger: ATGAAAGTGGCCTGTGGGAATGTCACCTTTATCTCAGGTCGGCTTGGCTCTTAAGCTGCAGTACAGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | GGCATGACCTGGAGTAACTGTCAGCTATTGCTTCCATaGTCTCTGCTCCAGCACTCACAGGTTTTTGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: GMTWSNCQLLLP*SLLQHSQVFDS Trigger: GCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGCAATAGCTGACAGTTACTCCAGGTCATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | CTGCACTTCTTTCAGATACCTGAGAAAGGTAAGGCTTaGGGAGACAGCCACTCACACGCAACAGGTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LHFFQIPEKGKA*GDSHSHATGLR Trigger: TCTGAGACCTGTTGCGTGTGAGTGGCTGTCTCCTCAAGCCTTACCTTTCTCAGGTATCTGAAAGAAGTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | TTCAAACACAGCCTAAAATGTGCTGCACAGTCACAGTaGAATGCAGAGTCCTGCAGGACCAGCCCATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FKHSLKCAAQSQ*NAESCRTSPCS Trigger: AGAGCATGGGCTGGTCCTGCAGGACTCTGCATTTCACTGTGACTGTGCAGCACATTTTAGGCTGTGTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | GATTCTCAGCGAGGTCAGGGGCAGCCAACATCATATTaGCTCCTTAAAGCTCTGGTGATTGTCCTCAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: DSQRGQGQPTSY*LLKALVIVLNN Trigger: GTTGTTGAGGACAATCACCAGAGCTTTAAGGAGGCAATATGATGTTGGCTGCCCCTGACCTCGCTGAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | TCTCTCTCTCTCTCTCTCACACACACACACACACAATaGTTTCTTGGTGACAGTCAGGGAGTGACAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSLTHTHTQ*FLGDSQGVTVA Trigger: AGCCACTGTCACTCCCTGACTGTCACCAAGAAACCATTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR-3UTR CAA 90 bp | ATCCGACACACTTTTTCTGACCTCCCTGGGCACCACAGGCACACATGTGGTATAAGCACTCACAGGTTTTaGACAGCAAACATCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IRHTFSDLPGHHRHTCGISTHRF*TANIRA Trigger: AGCTCTGATGTTTGCTGTCAAAAACCTGTGAGTGCT...TATACCACATGTGTGCCTGTGGTGCCCAGGGAGGTCAGAAAAAGTGTGTCGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | GCTTCCATGCTCTCTGCTCCAGCACTCACAGGTTTTTaGCAGCAAACATCAGAGCTCAATATCCACAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: ASMLSAPALTGF*QQTSELNIHSI Trigger: GATGCTGTGGATATTGAGCTCTGATGTTTGCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | CCTGGAGTAACTGTCAGCTATTGCTTCCATGCTCTCTaGTCCAGCACTCACAGGTTTTTGACAGCAAACATC | + |
|
Preference number: 3 (lower is better) Translates to: PGVTVSYCFHAL*SSTHRFLTANI Trigger: GATGTTTGCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGCAATAGCTGACAGTTACTCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | CAGAAATGCCCTTTCATCCAGTTCTACCCAGGAGGGTaGGCTGAGTCTCCATTATTCAATGGCTGTAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QKCPFIQFYPGG*AESPLFNGCRV Trigger: TACTCTACAGCCATTGAATAATGGAGACTCAGCCCACCCTCCTGGGTAGAACTGGATGAAAGGGCATTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | CTGAGAATCCAACCTCTACAGGCACCAGGGACTGACTaGAGTGCTCACTTAAGAAGAATATCTCTCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRIQPLQAPGTD*SAHLRRISLSL Trigger: GAGAGAGAGAGATATTCTTCTTAAGTGAGCACTTCAGTCAGTCCCTGGTGCCTGTAGAGGTTGGATTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | AGAGCTGAGAATCCAACCTCTACAGGCACCAGGGACTaGCTGAAGTGCTCACTTAAGAAGAATATCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RAENPTSTGTRD*LKCSLKKNISL Trigger: GAGAGAGATATTCTTCTTAAGTGAGCACTTCAGTCAGTCCCTGGTGCCTGTAGAGGTTGGATTCTCAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | GTTTGTCACAAGGAAAGTGCTGCCAGCATTTGCACATaGCTGTGCAACACTCTGGGCTACCTTGTTATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VCHKESAASICT*LCNTLGYLVIN Trigger: GTTGATAACAAGGTAGCCCAGAGTGTTGCACAGTCATGTGCAAATGCTGGCAGCACTTTCCTTGTGACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | AGTGTCGAAACACAGACTTTCTGCTCCATGGAAAGATaGCAACATAGTTACGTAGCTGAGGACTCTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SVETQTFCSMER*QHSYVAEDSPA Trigger: GGCAGGAGAGTCCTCAGCTACGTAACTATGTTGTCATCTTTCCATGGAGCAGAAAGTCTGTGTTTCGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | TCACCAAGGAATAGAAAATGCCTGGAAAGAACTGCATaGTCAATTCTGCTTGGGCAGGGGGTGACCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: SPRNRKCLERTA*SILLGQGVTTF Trigger: AAATGTGGTCACCCCCTGCCCAAGCAGAATTGAGCATGCAGTTCTTTCCAGGCATTTTCTATTCCTTGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | TTCAGTGACAAATGCTGTTTGTCACAAGGAAAGTGCTaGCAGCATTTGCACATGACTGTGCAACACTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FSDKCCLSQGKC*QHLHMTVQHSG Trigger: CCCAGAGTGTTGCACAGTCATGTGCAAATGCTGGCAGCACTTTCCTTGTGACAAACAGCATTTGTCACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | AGAAAGCCAGCGTGGGTGGCCTTCCATCACTGTCAGTaGATTCTTTACAGTATGGTTTTAGCTCCTAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: RKPAWVAFHHCQ*ILYSMVLAPKL Trigger: TAGTTTAGGAGCTAAAACCATACTGTAAAGAATGCACTGACAGTGATGGAAGGCCACCCACGCTGGCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR-3UTR CAA 90 bp | CACTCCTCCCAGCAACTGCTATCTGTTCTTTTCAAGATCCTTTCCCACAACACACAACATTTCAGCCTGTaGAGAGACCTAAAGCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: HSSQQLLSVLFKILSHNTQHFSL*RDLKPK Trigger: TTTAGGCTTTAGGTCTCTCAACAGGCTGAAATGTTG...TGTGTTGTGGGAAAGGATCTTGAAAAGAACAGATAGCAGTTGCTGGGAGGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | TCTGTGCTCCCACACCAATTTCACAGCTATAGACACTaGCTTGAGAGAACACAGCCCTTTTATCTACTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVLPHQFHSYRH*LERTQPFYLLE Trigger: CTCAAGTAGATAAAAGGGCTGTGTTCTCTCAAGTCAGTGTCTATAGCTGTGAAATTGGTGTGGGAGCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | ATGCGTAGTAGTTTCTTCCTCACTCCTCCCAGCAACTaGTATCTGTTCTTTTCAAGATCCTTTCCCACAACA | + |
|
Preference number: 3 (lower is better) Translates to: MRSSFFLTPPSN*YLFFSRSFPTT Trigger: TGTTGTGGGAAAGGATCTTGAAAAGAACAGATAGCAGTTGCTGGGAGGAGTGAGGAAGAAACTACTACGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | TACTTCAGTGACAAATGCTGTTTGTCACAAGGAAAGTaGTGCCAGCATTTGCACATGACTGTGCAACACTCT | + |
|
Preference number: 3 (lower is better) Translates to: YFSDKCCLSQGK*CQHLHMTVQHS Trigger: AGAGTGTTGCACAGTCATGTGCAAATGCTGGCAGCACTTTCCTTGTGACAAACAGCATTTGTCACTGAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | CCAAGTGCTGGGATTACAGGTGGGCATCATCTCTACTaGCCTGACCTAAGACTATCCAAATTAAGAGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: PSAGITGGHHLY*PDLRLSKLREY Trigger: ATATTCTCTTAATTTGGATAGTCTTAGGTCAGGCCAGTAGAGATGATGCCCACCTGTAATCCCAGCACTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR-3UTR CAA 90 bp | TTAGCTCTTTCAACATGGCTCACCAAGTTTTCCAAGCTATCCGATCTATTGGGTCTGATGCCCAGTACATaGGTAACTGGGGTTTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LALSTWLTKFSKLSDLLGLMPST*VTGVLS Trigger: ACTTAAAACCCCAGTTACCAATGTACTGGGCATCAG...ACCCAATAGATCGGATAGCTTGGAAAACTTGGTGAGCCATGTTGAAAGAGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | GAGTCTCCATTATTCAATGGCTGTAGAGTACTTCAGTaGCAAATGCTGTTTGTCACAAGGAAAGTGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ESPLFNGCRVLQ*QMLFVTRKVLP Trigger: TGGCAGCACTTTCCTTGTGACAAACAGCATTTGTCACTGAAGTACTCTACAGCCATTGAATAATGGAGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | GAGCACTGCAAAGGCTGTGCTAAATGCCTTAAAGCTTaGGAAATGGCTTTTAAAATGTCCAACTGTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EHCKGCAKCLKA*EMAFKMSNCVP Trigger: TGGGACACAGTTGGACATTTTAAAAGCCATTTCTCAAGCTTTAAGGCATTTAGCACAGCCTTTGCAGTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | TGCTGGGATTACAGGTGGGCATCATCTCTACTGGCCTaGCCTAAGACTATCCAAATTAAGAGAATATCACTT | + |
|
Preference number: 3 (lower is better) Translates to: CWDYRWASSLLA*PKTIQIKRISL Trigger: AAGTGATATTCTCTTAATTTGGATAGTCTTAGGTCAGGCCAGTAGAGATGATGCCCACCTGTAATCCCAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | ACGTATCTACTGTTCCCTCTAGAGTCTGTCTCTAAATaGGGCACTACACAGAAGCACATTACTGCATATTCA | + |
|
Preference number: 3 (lower is better) Translates to: TYLLFPLESVSK*GTTQKHITAYS Trigger: TGAATATGCAGTAATGTGCTTCTGTGTAGTGCCGCATTTAGAGACAGACTCTAGAGGGAACAGTAGATACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | GATTCACAGTGCACTGCACCTCGGAACACATGCAGTTaGATCCTAAGGATGTTTAAAAGCGATTTTAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: DSQCTAPRNTCS*ILRMFKSDFKV Trigger: GACTTTAAAATCGCTTTTAAACATCCTTAGGATCCAACTGCATGTGTTCCGAGGTGCAGTGCACTGTGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | AGTTATCATTTCGAGGTCCCACTCTCTCCTTACTGTTaGACTAATGCTAGAGAAACAGGACTGGTAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SYHFEVPLSPYC*TNARETGLVRN Trigger: ATTCCTTACCAGTCCTGTTTCTCTAGCATTAGTTCAACAGTAAGGAGAGAGTGGGACCTCGAAATGATAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | AAGAATACCATTAGACCTGGGAGTGGTGTCCTTTGCTaGTGGTCAATTCTAGTTATAACACGTTTGAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: KNTIRPGSGVLC*WSILVITRLNL Trigger: GAGGTTCAAACGTGTTATAACTAGAATTGACCATCAGCAAAGGACACCACTCCCAGGTCTAATGGTATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | CAAATGTATTCTGAAGTGTTAGGACACCAGCTGTACTaGGCTCTAAGGAGTAACACTACATACACAAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QMYSEVLGHQLY*ALRSNTTYTKV Trigger: CACCTTTGTGTATGTAGTGTTACTCCTTAGAGCTCAGTACAGCTGGTGTCCTAACACTTCAGAATACATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | CTACCTTCTACTTTAAAAGCTCACTATCCTAAGAACTaGGTGTTAGGAAATGCTGCCCGTTCCACTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPSTLKAHYPKN*VLGNAARSTLK Trigger: CTTTAGAGTGGAACGGGCAGCATTTCCTAACACTCAGTTCTTAGGATAGTGAGCTTTTAAAGTAGAAGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | CATTATTCAATGGCTGTAGAGTACTTCAGTGACAAATaGTGTTTGTCACAAGGAAAGTGCTGCCAGCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: HYSMAVEYFSDK*CLSQGKCCQHL Trigger: CAAATGCTGGCAGCACTTTCCTTGTGACAAACAGCATTTGTCACTGAAGTACTCTACAGCCATTGAATAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | CCCTCTGACAGTTCTGGGCAACTATCTTTCACATATTaGTACAGAAATCTAGTTAGCTCTTTCAACATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSDSSGQLSFTY*YRNLVSSFNMA Trigger: AGCCATGTTGAAAGAGCTAACTAGATTTCTGTACCAATATGTGAAAGATAGTTGCCCAGAACTGTCAGAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | ATGTTGTCACACTACAGTAAACCCAACGAGCTATTTTaGGGGTTCCTCTTTGGTTTCCCTAAATGTTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: MLSHYSKPNELF*GFLFGFPKCLT Trigger: AGTCAAACATTTAGGGAAACCAAAGAGGAACCCCCAAAATAGCTCGTTGGGTTTACTGTAGTGTGACAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR-3UTR CAA 90 bp | CACAGATCAACGTTGAGATGCAATATAGAACTAAGAATGAAGTTTTCCACACAGAGTAACTGTCAGCTATaGCTTCCATGCTCTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HRSTLRCNIELRMKFSTQSNCQL*LPCSLL Trigger: GAGCAGAGAGCATGGAAGCAATAGCTGACAGTTACT...CTGTGTGGAAAACTTCATTCTTAGTTCTATATTGCATCTCAACGTTGATCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR TCA 72 bp | CTTGGATTCTTGCATTTGACACTTAACAGTAACTTGTaGGACATTCAAACACAGCCTAAAATGTGCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LGFLHLTLNSNL*DIQTQPKMCCT Trigger: TGTGCAGCACATTTTAGGCTGTGTTTGAATGTCTCACAAGTTACTGTTAAGTGTCAAATGCAAGAATCCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CCA 72 bp | TCCCAGCTAAACTGTACAGTGAAGAAGTGTGTACGCTaGACTTACATTAACAAGAACACCAACTTAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: SQLNCTVKKCVR*TYINKNTNLTF Trigger: AAATGTTAAGTTGGTGTTCTTGTTAATGTAAGTCCAGCGTACACACTTCTTCACTGTACAGTTTAGCTGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR GCA 72 bp | AAGATTCCAAACATACTGTATCACTGTGAAGTCTCCTaGTTAGCACCGAGTGACACTTTCATGAATAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: KIPNILYHCEVS*LAPSDTFMNKY Trigger: ATATTTATTCATGAAAGTGTCACTCGGTGCTAAGCAGGAGACTTCACAGTGATACAGTATGTTTGGAATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | ACACACACACAATGGTTTCTTGGTGACAGTCAGGGAGTGACAGTGGCTCACTGCTGGGAATCCCCAGCCTaGCTTTGCCAGGTACCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: THTQWFLGDSQGVTVAHCWESPA*LCQVPL Trigger: CAGGGGTACCTGGCAAAGTCAGGCTGGGGATTCCCA...GCAGTGAGCCACTGTCACTCCCTGACTGTCACCAAGAAACCATTGTGTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGAGGGCCTGGGTTCCATTTCCAATTGCTCTGAACCCCAGTTCCGGGGGGAGCAAGCTGGTCATTaGTTCGCAGTTCAATGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LAEGLGSISNCSEPQFRGEQAGH*FAVQCN Trigger: ATTACATTGAACTGCGAATCAATGACCAGCTTGCTC...CCCCCGGAACTGGGGTTCAGAGCAATTGGAAATGGAACCCAGGCCCTCTGCCAG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | CACTGTGCAGCTCCAGTTGGAAGGTTAGACTCTCAGTGGTTAGAGGCAGAGATGTCCGACACCTCCCCGTaGTTACTGTGTGACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCAAPVGRLDSQWLEAEMSDTSP*LLCDFC Trigger: GCAGAAGTCACACAGTAACCACGGGGAGGTGTCGGA...CATCTCTGCCTCTAACCACTGAGAGTCTAACCTTCCAACTGGAGCTGCACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR GCA 90 bp | ACACACACACAATGGTTTCTTGGTGACAGTCAGGGAGTGACAGTGGCTCACTGCGCAATGTCCGTTGCATaGCACAGAATGTCCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: THTQWFLGDSQGVTVAHCAMSVA*HRMSLS Trigger: GCTGAGGGACATTCTGTGGCATGCAACGGACATTGC...GCAGTGAGCCACTGTCACTCCCTGACTGTCACCAAGAAACCATTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCAACATCATATTGCCTCCTTAAAGCTCTGGTGATTGTCCTCAACAACAGGTGCAGTGGCTGCCGGTaGTTAACCCACTGGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QPTSYCLLKALVIVLNNRCSGCR*LTHWSL Trigger: GAGTGACCAGTGGGTTAAGCACCGGCAGCCACTGCA...CCTGTTGTTGAGGACAATCACCAGAGCTTTAAGGAGGCAATATGATGTTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | GAGAGTCAAGGCATGACCTGGAGTAACTGTCAGCTATaGCTTCCATGCTCTCTGCTCCAGCACTCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESQGMTWSNCQL*LPCSLLQHSQV Trigger: AACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGCAATAGCTGACAGTTACTCCAGGTCATGCCTTGACTCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGTGGGCACTGTCACCCGTGTTTGGTTTAAGAATTCTGAAGGAGCAAAAGATCATCCAGGACGCTaGCGGGAATCTCCAGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CKVGTVTRVWFKNSEGAKDHPGR*RESPGV Trigger: AACGCCTGGAGATTCCCGGCAGCGTCCTGGATGATC...TTTTGCTCCTTCAGAATTCTTAAACCAAACACGGGTGACAGTGCCCACTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR GCA 90 bp | TGTGGATACCACTTGTTAAAACCGCACACGACAGACGCACGTGTACACATGCACCCTTCAGGAAACAGCTaGTGGCTGTGGCGGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CGYHLLKPHTTDARVHMHPSGNS*WLWRNF Trigger: AAAATTCCGCCACAGCCAGCAGCTGTTTCCTGAAGG...GTGCATGTGTACACGTGCGTCTGTCGTGTGCGGTTTTAACAAGTGGTATCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR GCA 90 bp | ATCCGACACACTTTTTCTGACCTCCCTGGGCACCACAGGCACACATGTGGTATAACTTGCAATGTCCGTTaGATGCCACAGAATGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IRHTFSDLPGHHRHTCGITCNVR*MPQNVP Trigger: AGGGACATTCTGTGGCATGCAACGGACATTGCAAGT...TATACCACATGTGTGCCTGTGGTGCCCAGGGAGGTCAGAAAAAGTGTGTCGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | CACTGTGCAGCTCCAGTTGGAAGGTTAGACTCTCAGTGGTTAGAGGCAGAGATGGTCTTTTGGGACTCCTaGAATGATGTACAAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HCAAPVGRLDSQWLEAEMVFWDS*NDVQAS Trigger: GCTCGCTTGTACATCATTCCAGGAGTCCCAAAAGAC...CATCTCTGCCTCTAACCACTGAGAGTCTAACCTTCCAACTGGAGCTGCACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | GCATTTGCACATGACTGTGCAACACTCTGGGCTACCTaGTTATCAACAACAGAGAGGGTGAGAGCTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AFAHDCATLWAT*LSTTERVRALA Trigger: TGCCAGAGCTCTCACCCTCTCTGTTGTTGATAACAAGGTAGCCCAGAGTGTTGCACAGTCATGTGCAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | TTAGCTCTTTCAACATGGCTCACCAAGTTTTCCAAGCTATCCGATCTATTGGGTCCCGTGGTTACTGTGTaGCTTCTGCTGCAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LALSTWLTKFSKLSDLLGPVVTV*LLLQWL Trigger: CAGCCACTGCAGCAGAAGTCACACAGTAACCACGGG...ACCCAATAGATCGGATAGCTTGGAAAACTTGGTGAGCCATGTTGAAAGAGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | CACTCCTCCCAGCAACTGCTATCTGTTCTTTTCAAGATCCTTTCCCACAACACATTGGGACTCCTGGAATaGTGTACAAGCGAGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSQQLLSVLFKILSHNTLGLLE*CTSEQA Trigger: AGCTTGCTCGCTTGTACATCATTCCAGGAGTCCCAA...TGTGTTGTGGGAAAGGATCTTGAAAAGAACAGATAGCAGTTGCTGGGAGGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | CACTCCTCCCAGCAACTGCTATCTGTTCTTTTCAAGATCCTTTCCCACAACACATGGTGTGCTACCAGCTaGGGAAAACCCATTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: HSSQQLLSVLFKILSHNTWCATS*GKPIVT Trigger: AGTGACAATGGGTTTTCCTCAGCTGGTAGCACACCA...TGTGTTGTGGGAAAGGATCTTGAAAAGAACAGATAGCAGTTGCTGGGAGGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | ATCCGACACACTTTTTCTGACCTCCCTGGGCACCACAGGCACACATGTGGTATAAGCCAAGCTTGGACTTaGGAGTCATGTCATTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: IRHTFSDLPGHHRHTCGISQAWT*ESCHFY Trigger: ATAGAAATGACATGACTCCCAAGTCCAAGCTTGGCT...TATACCACATGTGTGCCTGTGGTGCCCAGGGAGGTCAGAAAAAGTGTGTCGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | CACTGTGCAGCTCCAGTTGGAAGGTTAGACTCTCAGTGGTTAGAGGCAGAGATGAACTCAGAAAGGCTCTaGATGAAAATGGGAACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCAAPVGRLDSQWLEAEMNSERL*MKMGTC Trigger: GCAAGTTCCCATTTTCATCCAGAGCCTTTCTGAGTT...CATCTCTGCCTCTAACCACTGAGAGTCTAACCTTCCAACTGGAGCTGCACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | TGTGGATACCACTTGTTAAAACCGCACACGACAGACGCACGTGTACACATGCACCATTTTGGTCAAACTTaGAACTCAGAAAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGYHLLKPHTTDARVHMHHFGQT*NSERLW Trigger: CCAGAGCCTTTCTGAGTTTCAAGTTTGACCAAAATG...GTGCATGTGTACACGTGCGTCTGTCGTGTGCGGTTTTAACAAGTGGTATCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | TGCAAAGTGGGCACTGTCACCCGTGTTTGGTTTAAGAATTCTGAAGGAGCAAAATGGGCAAGTTCAATCTaGAAGCACACTCGGATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKVGTVTRVWFKNSEGAKWASSI*KHTRIA Trigger: TGCGATCCGAGTGTGCTTCCAGATTGAACTTGCCCA...TTTTGCTCCTTCAGAATTCTTAAACCAAACACGGGTGACAGTGCCCACTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | TGCTTCCATGCTCTCTGCTCCAGCACTCACAGGTTTTaGACAGCAAACATCAGAGCTCAATATCCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFHALCSSTHRF*TANIRAQYPQH Trigger: ATGCTGTGGATATTGAGCTCTGATGTTTGCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGAGCATGGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | AAATGCTGTTTGTCACAAGGAAAGTGCTGCCAGCATTaGCACATGACTGTGCAACACTCTGGGCTACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KCCLSQGKCCQH*HMTVQHSGLPC Trigger: ACAAGGTAGCCCAGAGTGTTGCACAGTCATGTGCAAATGCTGGCAGCACTTTCCTTGTGACAAACAGCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | TTAGCTCTTTCAACATGGCTCACCAAGTTTTCCAAGCTATCCGATCTATTGGGTTCTCTTATCCCGCACTaGGGTAATCCTGGTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LALSTWLTKFSKLSDLLGSLIPH*GNPGVF Trigger: GAACACACCAGGATTACCTCAGTGCGGGATAAGAGA...ACCCAATAGATCGGATAGCTTGGAAAACTTGGTGAGCCATGTTGAAAGAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCAACATCATATTGCCTCCTTAAAGCTCTGGTGATTGTCCTCAACAACAGGTACAAGCGAGCAAGCTaGTCATTGATTCGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPTSYCLLKALVIVLNNRYKRAS*SLIRSS Trigger: TGAACTGCGAATCAATGACCAGCTTGCTCGCTTGTA...CCTGTTGTTGAGGACAATCACCAGAGCTTTAAGGAGGCAATATGATGTTGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | GGAATGCTGGGACCAATTATAAATATGGCTCAAGAAGACCCAAGCAAAGCAGCTTCAGGAAACAGCTGCTaGCTGTGGCGGAATTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GMLGPIINMAQEDPSKAASGNSC*LWRNFV Trigger: AACAAAATTCCGCCACAGCCAGCAGCTGTTTCCTGA...AGCTGCTTTGCTTGGGTCTTCTTGAGCCATATTTATAATTGGTCCCAGCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | TGCTCCCACACCAATTTCACAGCTATAGACACTGACTaGAGAGAACACAGCCCTTTTATCTACTTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSHTNFTAIDTD*REHSPFIYLRL Trigger: GAGCCTCAAGTAGATAAAAGGGCTGTGTTCTCTCAAGTCAGTGTCTATAGCTGTGAAATTGGTGTGGGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | GGAATGCTGGGACCAATTATAAATATGGCTCAAGAAGACCCAAGCAAAGCAGCTAGCAGAAATGGACAGTaGCTGAAAACAGCTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GMLGPIINMAQEDPSKAASRNGQ*LKTALA Trigger: TGCCAAAGCTGTTTTCAGTCACTGTCCATTTCTGCT...AGCTGCTTTGCTTGGGTCTTCTTGAGCCATATTTATAATTGGTCCCAGCATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR GCA 90 bp | ATCCGACACACTTTTTCTGACCTCCCTGGGCACCACAGGCACACATGTGGTATACTTGATACTGTTTTCTaGCATTCCCTCTCATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IRHTFSDLPGHHRHTCGILDTVF*HSLSYF Trigger: AAAATATGAGAGGGAATGGCAGAAAACAGTATCAAG...TATACCACATGTGTGCCTGTGGTGCCCAGGGAGGTCAGAAAAAGTGTGTCGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | TTAGCTCTTTCAACATGGCTCACCAAGTTTTCCAAGCTATCCGATCTATTGGGTCACATCTTCACCTTGTaGCAGCAGAAATGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LALSTWLTKFSKLSDLLGHIFTL*QQKWTV Trigger: CACTGTCCATTTCTGCTGCCACAAGGTGAAGATGTG...ACCCAATAGATCGGATAGCTTGGAAAACTTGGTGAGCCATGTTGAAAGAGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | TTCCACAGTGCATTAAATGAAGCAGCACATCACTGGTaGGTTCTTACAGTCAACCACTTTAAGGGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHSALNEAAHHW*VLTVNHFKGHG Trigger: TCCATGGCCCTTAAAGTGGTTGACTGTAAGAACCAACCAGTGATGTGCTGCTTCATTTAATGCACTGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | GGAATGCTGGGACCAATTATAAATATGGCTCAAGAAGACCCAAGCAAAGCAGCTGAAATGGACAGTGACTaGAAACAGCTTTGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GMLGPIINMAQEDPSKAAEMDSD*KQLWQS Trigger: ACTTTGCCAAAGCTGTTTTCAGTCACTGTCCATTTC...AGCTGCTTTGCTTGGGTCTTCTTGAGCCATATTTATAATTGGTCCCAGCATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTGCTCCAGCACTCACAGGTTTTTGACAGCAAACATCAGAGCTCAATATCCGTCATGTCATTTCTATaGCAGGGCAATTTCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLLQHSQVFDSKHQSSISVMSFL*QGNFSM Trigger: CATTGAGAAATTGCCCTGTCATAGAAATGACATGAC...GGATATTGAGCTCTGATGTTTGCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR GCA 90 bp | TCTCTGCTCCAGCACTCACAGGTTTTTGACAGCAAACATCAGAGCTCAATATCCTCTTCACTGGGAATATaGAAAATAAATCGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLQHSQVFDSKHQSSISSSLGI*KINRLQ Trigger: CTGCAGCCGATTTATTTTGCATATTCCCAGTGAAGA...GGATATTGAGCTCTGATGTTTGCTGTCAAAAACCTGTGAGTGCTGGAGCAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | TTGCAATCACTAAGATGGGGAGGTGAAACACTCCTATaGACATGGCTACTTGCTGATGATGCAATCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQSLRWGGETLL*TWLLADDAIKT Trigger: TGTTTTGATTGCATCATCAGCAAGTAGCCATGTCAATAGGAGTGTTTCACCTCCCCATCTTAGTGATTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | CTATTTATAAGCAGAGATATACTTTGTGGATACCACTaGTTAAAACCGCACACGACAGACGCACGTGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: LFISRDILCGYH*LKPHTTDARVH Trigger: GTGTACACGTGCGTCTGTCGTGTGCGGTTTTAACAAGTGGTATCCACAAAGTATATCTCTGCTTATAAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | TCAACGTTGAGATGCAATATAGAACTAAGAATGAAGTTTTCCACACAGACTCACAAGGCAGGTCACATGTaGCATCTGTCTCGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: STLRCNIELRMKFSTQTHKAGHM*HLSRSC Trigger: ACAACTTCGAGACAGATGCCACATGTGACCTGCCTT...GTGAGTCTGTGTGGAAAACTTCATTCTTAGTTCTATATTGCATCTCAACGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | TCAACGTTGAGATGCAATATAGAACTAAGAATGAAGTTTTCCACACAGACTCACTTGTGGCAGCAGAAATaGACAGTGACTGAAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: STLRCNIELRMKFSTQTHLWQQK*TVTENS Trigger: GCTGTTTTCAGTCACTGTCCATTTCTGCTGCCACAA...GTGAGTCTGTGTGGAAAACTTCATTCTTAGTTCTATATTGCATCTCAACGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CCA 90 bp | CACAGATCAACGTTGAGATGCAATATAGAACTAAGAATGAAGTTTTCCACACAGAGGGCAATTTCTCAATaGAGAACCACTCAATATTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRSTLRCNIELRMKFSTQRAISQ*RTTQYS Trigger: GGAATATTGAGTGGTTCTCCATTGAGAAATTGCCCT...CTGTGTGGAAAACTTCATTCTTAGTTCTATATTGCATCTCAACGTTGATCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | CACATACAAACCTTACTCTCTCAACATTTCAGCCTGTaGAGAGACCTAAAGCCTAAAGTTATTGTAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: HIQTLLSQHFSL*RDLKPKVIVNA Trigger: TGCATTTACAATAACTTTAGGCTTTAGGTCTCTCAACAGGCTGAAATGTTGAGAGAGTAAGGTTTGTATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| 3UTR CAA 72 bp | CTATTTTGGGGGTTCCTCTTTGGTTTCCCTAAATGTTaGACTAATAACTACAGTAAAGCAAATACTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LFWGFLFGFPKC*TNNYSKANTFL Trigger: TAGGAAAGTATTTGCTTTACTGTAGTTATTAGTCAAACATTTAGGGAAACCAAAGAGGAACCCCCAAAATAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS GCA 90 bp | TTGAGAAGGTCCGACACCTCCCCGTGGTTACTGTGTGACTTCTGCTaGAGTGGCTGCCGGTGCTTAACCCACTGGTCACTCGGGGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LRRSDTSPWLLCDFC*SGCRCLTHWSLGEP Trigger: AGGTTCCCCGAGTGACCAGTGGGTTAAGCACCGGCAGCCACTGCAGCAGAAGTCACACAGTAACCACGGGGAGGTGTCGGACCTTCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS GCA 90 bp | GCTTTGAGAAGGTCCGACACCTCCCCGTGGTTACTGTGTGACTTCTaGTGCAGTGGCTGCCGGTGCTTAACCCACTGGTCACTCGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALRRSDTSPWLLCDF*CSGCRCLTHWSLGE Trigger: TTCCCCGAGTGACCAGTGGGTTAAGCACCGGCAGCCACTGCAGCAGAAGTCACACAGTAACCACGGGGAGGTGTCGGACCTTCTCAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS CCA 90 bp | TTACTGTGTGACTTCTGCTGCAGTGGCTGCCGGTGCTTAACCCACTaGTCACTCGGGGAACCTTCAGGAAACAGCTGCTGGCTGTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLCDFCCSGCRCLTH*SLGEPSGNSCWLWR Trigger: CCGCCACAGCCAGCAGCTGTTTCCTGAAGGTTCCCCGAGTGACCAGTGGGTTAAGCACCGGCAGCCACTGCAGCAGAAGTCACACAGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CAA 90 bp | CTGGCAGAGGGCCTGGGTTCCATTTCCAATTGCTCTGAACCCCAGTTCCGGGGGGGCTGTGGCGGAATTTaGTTCGACTCAATTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAEGLGSISNCSEPQFRGGCGGI*FDSISP Trigger: TGGAGAAATTGAGTCGAACAAAATTCCGCCACAGCC...CCCCCGGAACTGGGGTTCAGAGCAATTGGAAATGGAACCCAGGCCCTCTGCCAG 56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS TCA 90 bp | ATTCTTTGCTTTGAGAAGGTCCGACACCTCCCCGTGGTTACTGTGTaGCTTCTGCTGCAGTGGCTGCCGGTGCTTAACCCACTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: ILCFEKVRHLPVVTV*LLLQWLPVLNPLVT Trigger: AGTGACCAGTGGGTTAAGCACCGGCAGCCACTGCAGCAGAAGTCACACAGTAACCACGGGGAGGTGTCGGACCTTCTCAAAGCAAAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS GCA 90 bp | CGGTGCTTAACCCACTGGTCACTCGGGGAACCTTCAGGAAACAGCTaGTGGCTGTGGCGGAATTTTGTTCGACTCAATTTCTCCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLTHWSLGEPSGNS*WLWRNFVRLNFSTV Trigger: CACCGTGGAGAAATTGAGTCGAACAAAATTCCGCCACAGCCAGCAGCTGTTTCCTGAAGGTTCCCCGAGTGACCAGTGGGTTAAGCACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS CCA 90 bp | CATGTTCTACCGACGGCTCTTCACCAGAACAAGGCAGGTCACATGTaGCATCTGTCTCGAAGTTGTCCTGAAGTTTCCGTGGATGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVLPTALHQNKAGHM*HLSRSCPEVSVDAA Trigger: AGCTGCATCCACGGAAACTTCAGGACAACTTCGAGACAGATGCCACATGTGACCTGCCTTGTTCTGGTGAAGAGCCGTCGGTAGAACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS TCA 90 bp | TCGACTCAATTTCTCCACGGTGGGTCTAGCTGGTGTGCTACCAGCTaGGGAAAACCCATTGTCACTGTCCGAGGAATCTCCAAATCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: STQFLHGGSSWCATS*GKPIVTVRGISKSS Trigger: CGAAGATTTGGAGATTCCTCGGACAGTGACAATGGGTTTTCCTCAGCTGGTAGCACACCAGCTAGACCCACCGTGGAGAAATTGAGTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS-3UTR CAA 90 bp | ATCCGACACACTTTTTCTGACCTCCCTGGGCACCACAGGCACACATGTGGTATAAACTTGCAATGTCCGTaGCATGCCACAGAATGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IRHTFSDLPGHHRHTCGINLQCP*HATECP Trigger: GGGACATTCTGTGGCATGCAACGGACATTGCAAGTT...TATACCACATGTGTGCCTGTGGTGCCCAGGGAGGTCAGAAAAAGTGTGTCGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS TCA 90 bp | CCAGAACAAGGCAGGTCACATGTGGCATCTGTCTCGAAGTTGTCCTaGAGTTTCCGTGGATGCAGCTTCTTTTCACATTTCACCAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PEQGRSHVASVSKLS*SFRGCSFFSHFTKG Trigger: TCCCTTGGTGAAATGTGAAAAGAAGCTGCATCCACGGAAACTTCAGGACAACTTCGAGACAGATGCCACATGTGACCTGCCTTGTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
||
| CDS GCA 90 bp | AACTCAGAAAGGCTCTGGATGAAAATGGGAACTTGCAATGTCCGTTaGATGCCACAGAATGTCCCTCAGCATGTTCTACCGACGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NSERLWMKMGTCNVR*MPQNVPQHVLPTAL Trigger: AAGAGCCGTCGGTAGAACATGCTGAGGGACATTCTGTGGCATGCAACGGACATTGCAAGTTCCCATTTTCATCCAGAGCCTTTCTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS-3UTR CAA 90 bp | TGTGGATACCACTTGTTAAAACCGCACACGACAGACGCACGTGTACACATGCACTTCCACATCTTCACCTaGTGGCAGCAGAAATGGACA | + |
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Preference number: 5 (lower is better) Translates to: CGYHLLKPHTTDARVHMHFHIFT*WQQKWT Trigger: TGTCCATTTCTGCTGCCACAAGGTGAAGATGTGGAA...GTGCATGTGTACACGTGCGTCTGTCGTGTGCGGTTTTAACAAGTGGTATCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS-3UTR CAA 90 bp | TTAGCTCTTTCAACATGGCTCACCAAGTTTTCCAAGCTATCCGATCTATTGGGTAGGGATTCTGCTGCTTaGCCGGCTGACCATGGACTC | + |
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Preference number: 5 (lower is better) Translates to: LALSTWLTKFSKLSDLLGRDSAA*PADHGL Trigger: GAGTCCATGGTCAGCCGGCAAAGCAGCAGAATCCCT...ACCCAATAGATCGGATAGCTTGGAAAACTTGGTGAGCCATGTTGAAAGAGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS CCA 90 bp | CAGGTCACATGTGGCATCTGTCTCGAAGTTGTCCTGAAGTTTCCGTaGATGCAGCTTCTTTTCACATTTCACCAAGGGATTCTGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: QVTCGICLEVVLKFP*MQLLFTFHQGILLL Trigger: AAGCAGCAGAATCCCTTGGTGAAATGTGAAAAGAAGCTGCATCCACGGAAACTTCAGGACAACTTCGAGACAGATGCCACATGTGACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS GCA 90 bp | CCCCTGAACCAGCAGTACATTCTCCAGTGTCTCATCGAGAATAATTaGACCGTAAGTCGGGACTCCCATTTTATATTCCTTCCATTCATC | + |
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Preference number: 5 (lower is better) Translates to: PLNQQYILQCLIENN*TVSRDSHFIFLPFI Trigger: GATGAATGGAAGGAATATAAAATGGGAGTCCCGACTTACGGTGCAATTATTCTCGATGAGACACTGGAGAATGTACTGCTGGTTCAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS TCA 90 bp | TTAGGTGCCAAGCCAAGCTTGGACTTGGGAGTCATGTCATTTCTATaGCAGGGCAATTTCTCAATGGAGAACCACTCAATATTCCTAATT | + |
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Preference number: 5 (lower is better) Translates to: LGAKPSLDLGVMSFL*QGNFSMENHSIFLI Trigger: AATTAGGAATATTGAGTGGTTCTCCATTGAGAAATTGCCCTGTCATAGAAATGACATGACTCCCAAGTCCAAGCTTGGCTTGGCACCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS TCA 90 bp | CATTATAGCATTTTGGTCAAACTTGAAACTCAGAAAGGCTCTGGATaGAAATGGGAACTTGCAATGTCCGTTGCATGCCACAGAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: HYSILVKLETQKGSG*KWELAMSVACHRMS Trigger: GGACATTCTGTGGCATGCAACGGACATTGCAAGTTCCCATTTTCATCCAGAGCCTTTCTGAGTTTCAAGTTTGACCAAAATGCTATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS-3UTR CAA 90 bp | TCAACGTTGAGATGCAATATAGAACTAAGAATGAAGTTTTCCACACAGACTCACGCTGAGGAAAACCCATaGTCACTGTCCGAGGAATCT | + |
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Preference number: 5 (lower is better) Translates to: STLRCNIELRMKFSTQTHAEENP*SLSEES Trigger: AGATTCCTCGGACAGTGACAATGGGTTTTCCTCAGC...GTGAGTCTGTGTGGAAAACTTCATTCTTAGTTCTATATTGCATCTCAACGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS-3UTR CAA 90 bp | CACAGATCAACGTTGAGATGCAATATAGAACTAAGAATGAAGTTTTCCACACAGGCATTTTGGTCAAACTaGAAACTCAGAAAGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: HRSTLRCNIELRMKFSTQAFWSN*KLRKAL Trigger: CAGAGCCTTTCTGAGTTTCAAGTTTGACCAAAATGC...CTGTGTGGAAAACTTCATTCTTAGTTCTATATTGCATCTCAACGTTGATCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS GCA 72 bp | TCCGACACCTCCCCGTGGTTACTGTGTGACTTCTGCTaGAGTGGCTGCCGGTGCTTAACCCACTGGTCACTC | + |
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Preference number: 6 (lower is better) Translates to: SDTSPWLLCDFC*SGCRCLTHWSL Trigger: GAGTGACCAGTGGGTTAAGCACCGGCAGCCACTGCAGCAGAAGTCACACAGTAACCACGGGGAGGTGTCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS GCA 72 bp | AGGTCCGACACCTCCCCGTGGTTACTGTGTGACTTCTaGTGCAGTGGCTGCCGGTGCTTAACCCACTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RSDTSPWLLCDF*CSGCRCLTHWS Trigger: TGACCAGTGGGTTAAGCACCGGCAGCCACTGCAGCAGAAGTCACACAGTAACCACGGGGAGGTGTCGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS TCA 72 bp | TTTGAGAAGGTCCGACACCTCCCCGTGGTTACTGTGTaGCTTCTGCTGCAGTGGCTGCCGGTGCTTAACCCA | + |
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Preference number: 6 (lower is better) Translates to: FEKVRHLPVVTV*LLLQWLPVLNP Trigger: TGGGTTAAGCACCGGCAGCCACTGCAGCAGAAGTCACACAGTAACCACGGGGAGGTGTCGGACCTTCTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS CAA 90 bp | TCCACGGTGGGTCTAGCTGGTGTGCTACCAGCTGAGGAAAACCCATaGTCACTGTCCGAGGAATCTCCAAATCTTCGAGACAGCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: STVGLAGVLPAEENP*SLSEESPNLRDSQS Trigger: GGACTGGCTGTCTCGAAGATTTGGAGATTCCTCGGACAGTGACAATGGGTTTTCCTCAGCTGGTAGCACACCAGCTAGACCCACCGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS TCA 72 bp | TTTCTCCACGGTGGGTCTAGCTGGTGTGCTACCAGCTaGGGAAAACCCATTGTCACTGTCCGAGGAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: FLHGGSSWCATS*GKPIVTVRGIS Trigger: GGAGATTCCTCGGACAGTGACAATGGGTTTTCCTCAGCTGGTAGCACACCAGCTAGACCCACCGTGGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS GCA 72 bp | ACCCACTGGTCACTCGGGGAACCTTCAGGAAACAGCTaGTGGCTGTGGCGGAATTTTGTTCGACTCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: THWSLGEPSGNS*WLWRNFVRLNF Trigger: GAAATTGAGTCGAACAAAATTCCGCCACAGCCAGCAGCTGTTTCCTGAAGGTTCCCCGAGTGACCAGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS CCA 72 bp | TCACTCGGGGAACCTTCAGGAAACAGCTGCTGGCTGTaGCGGAATTTTGTTCGACTCAATTTCTCCACGGTG | + |
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Preference number: 6 (lower is better) Translates to: SLGEPSGNSCWL*RNFVRLNFSTV Trigger: CACCGTGGAGAAATTGAGTCGAACAAAATTCCGCCACAGCCAGCAGCTGTTTCCTGAAGGTTCCCCGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS CAA 72 bp | GGTCTAGCTGGTGTGCTACCAGCTGAGGAAAACCCATaGTCACTGTCCGAGGAATCTCCAAATCTTCGAGAC | + |
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Preference number: 6 (lower is better) Translates to: GLAGVLPAEENP*SLSEESPNLRD Trigger: GTCTCGAAGATTTGGAGATTCCTCGGACAGTGACAATGGGTTTTCCTCAGCTGGTAGCACACCAGCTAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS CAA 72 bp | GCTTCTTTTCACATTTCACCAAGGGATTCTGCTGCTTaGCCGGCTGACCATGGACTCCGTTCGCTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ASFHISPRDSAA*PADHGLRSLSS Trigger: AGAAGAGAGCGAACGGAGTCCATGGTCAGCCGGCAAAGCAGCAGAATCCCTTGGTGAAATGTGAAAAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS GCA 72 bp | CTTCTTTTCACATTTCACCAAGGGATTCTGCTGCTTTaGCGGCTGACCATGGACTCCGTTCGCTCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLFTFHQGILLL*RLTMDSVRSLL Trigger: AAGAAGAGAGCGAACGGAGTCCATGGTCAGCCGGCAAAGCAGCAGAATCCCTTGGTGAAATGTGAAAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS GCA 72 bp | AGGCTCTGGATGAAAATGGGAACTTGCAATGTCCGTTaGATGCCACAGAATGTCCCTCAGCATGTTCTACCG | + |
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Preference number: 6 (lower is better) Translates to: RLWMKMGTCNVR*MPQNVPQHVLP Trigger: CGGTAGAACATGCTGAGGGACATTCTGTGGCATGCAACGGACATTGCAAGTTCCCATTTTCATCCAGAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS CAA 90 bp | AAACTCAGAAAGGCTCTGGATGAAAATGGGAACTTGCAATGTCCGTaGCATGCCACAGAATGTCCCTCAGCATGTTCTACCGACGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: KLRKALDENGNLQCP*HATECPSACSTDGS Trigger: AGAGCCGTCGGTAGAACATGCTGAGGGACATTCTGTGGCATGCAACGGACATTGCAAGTTCCCATTTTCATCCAGAGCCTTTCTGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS TCA 72 bp | GGCAGGTCACATGTGGCATCTGTCTCGAAGTTGTCCTaGAGTTTCCGTGGATGCAGCTTCTTTTCACATTTC | + |
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Preference number: 6 (lower is better) Translates to: GRSHVASVSKLS*SFRGCSFFSHF Trigger: GAAATGTGAAAAGAAGCTGCATCCACGGAAACTTCAGGACAACTTCGAGACAGATGCCACATGTGACCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS CAA 72 bp | AAGGCTCTGGATGAAAATGGGAACTTGCAATGTCCGTaGCATGCCACAGAATGTCCCTCAGCATGTTCTACC | + |
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Preference number: 6 (lower is better) Translates to: KALDENGNLQCP*HATECPSACST Trigger: GGTAGAACATGCTGAGGGACATTCTGTGGCATGCAACGGACATTGCAAGTTCCCATTTTCATCCAGAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS TCA 72 bp | TCCACATCTTCACCTTGTGGCAGCAGAAATGGACAGTaGCTGAAAACAGCTTTGGCAAAGTCTCTTATCCCG | + |
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Preference number: 6 (lower is better) Translates to: STSSPCGSRNGQ*LKTALAKSLIP Trigger: CGGGATAAGAGACTTTGCCAAAGCTGTTTTCAGTCACTGTCCATTTCTGCTGCCACAAGGTGAAGATGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS TCA 72 bp | TTCTGCCATTCCCTCTCATATTTTGATTCTTTGCTTTaGGAAGGTCCGACACCTCCCCGTGGTTACTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: FCHSLSYFDSLL*EGPTPPRGYCV Trigger: CACACAGTAACCACGGGGAGGTGTCGGACCTTCTCAAAGCAAAGAATCAAAATATGAGAGGGAATGGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS TCA 72 bp | ATTTTGGTCAAACTTGAAACTCAGAAAGGCTCTGGATaGAAATGGGAACTTGCAATGTCCGTTGCATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ILVKLETQKGSG*KWELAMSVACH Trigger: GTGGCATGCAACGGACATTGCAAGTTCCCATTTTCATCCAGAGCCTTTCTGAGTTTCAAGTTTGACCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS GCA 72 bp | CAGCAGTACATTCTCCAGTGTCTCATCGAGAATAATTaGACCGTAAGTCGGGACTCCCATTTTATATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QQYILQCLIENN*TVSRDSHFIFL Trigger: AAGGAATATAAAATGGGAGTCCCGACTTACGGTGCAATTATTCTCGATGAGACACTGGAGAATGTACTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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| CDS CCA 72 bp | AATCTTTTCCACATCTTCACCTTGTGGCAGCAGAAATaGACAGTGACTGAAAACAGCTTTGGCAAAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: NLFHIFTLWQQK*TVTENSFGKVS Trigger: AGAGACTTTGCCAAAGCTGTTTTCAGTCACTGTCCATTTCTGCTGCCACAAGGTGAAGATGTGGAAAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025350.10 |
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