Pregenerated sensors for DCP1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041477Ensembl transcript IDs: ENSMUST00000073909.6, ENSMUST00000112777.9
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCATGGGCATTTTCTAACTGTGGCTGTCTGAAAGCCAACTTGAACTaGGAAACGGAGCGTTGCTTCAAGCCGGGGCCGCTGCTGACACTT | + |
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Preference number: 1 (lower is better) Translates to: SWAFSNCGCLKANLN*ETERCFKPGPLLTL Trigger: AAGTGTCAGCAGCGGCCCCGGCTTGAAGCAACGCTCCGTTTCTCAGTTCAAGTTGGCTTTCAGACAGCCACAGTTAGAAAATGCCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR TCA 90 bp | CATGGATATCTCTTGCCCTGTTCTCCTCATCAGACTAAAGCGGTGTaGATACTCACTGTCAAGCACTTGAGAGATCCCTATGAGTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: HGYLLPCSPHQTKAV*ILTVKHLRDPYEFS Trigger: GCTGAACTCATAGGGATCTCTCAAGTGCTTGACAGTGAGTATTCACACCGCTTTAGTCTGATGAGGAGAACAGGGCAAGAGATATCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR CCA 90 bp | TTCAGAAAGATTCTTCCTCCAAAGGCTCAGATCAAACATGCCAAATaGAGCTTTACAAATAAAAGGCTGACTTTGGTAAAGTCCTCATTG | + |
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Preference number: 1 (lower is better) Translates to: FRKILPPKAQIKHAK*SFTNKRLTLVKSSL Trigger: CAATGAGGACTTTACCAAAGTCAGCCTTTTATTTGTAAAGCTCCATTTGGCATGTTTGATCTGAGCCTTTGGAGGAAGAATCTTTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCCGATGTGCTGTGAGGGTGAGCAGACACCAACCCCTCTTCAGCCCAGCTTCGTCCCAGAAGCCCCATaGTGCTGCCAGGAGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QPMCCEGEQTPTPLQPSFVPEAP*CCQEGG Trigger: TCCTCCCTCCTGGCAGCAGCATGGGGCTTCTGGGAC...GAAGCTGGGCTGAAGAGGGGTTGGTGTCTGCTCACCCTCACAGCACATCGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCGATGTGCTGTGAGGGTGAGCAGACACCAACCCCTCTTCAGCCCAGCTTCCTCCTAAGGGAGAGGTaGTGTCCCAGAAGCCCCATG | + |
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Preference number: 2 (lower is better) Translates to: QPMCCEGEQTPTPLQPSFLLRER*CPRSPM Trigger: CATGGGGCTTCTGGGACACCACCTCTCCCTTAGGAG...GAAGCTGGGCTGAAGAGGGGTTGGTGTCTGCTCACCCTCACAGCACATCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAGCCCAGCTTCCTTCCTTAGGGAAAGCACGCCCTCCTAAGGGAGAGGTGGAATCTTCAACCTTCTaGCCCAGAATAGCCACTACC | + |
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Preference number: 2 (lower is better) Translates to: SSAQLPSLGKARPPKGEVESSTF*PRIATT Trigger: GGTAGTGGCTATTCTGGGGCAGAAGGTTGAAGATTC...CACCTCTCCCTTAGGAGGGCGTGCTTTCCCTAAGGAAGGAAGCTGGGCTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCCGATGTGCTGTGAGGGTGAGCAGACACCAACCCCTCTTCAGCCCAGCTTCAAGCTTTATTCATTGTaGATACTTAGCAGGGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: QPMCCEGEQTPTPLQPSFKLYSL*ILSRAD Trigger: ATCAGCCCTGCTAAGTATTCACAATGAATAAAGCTT...GAAGCTGGGCTGAAGAGGGGTTGGTGTCTGCTCACCCTCACAGCACATCGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCTGTGAGGGTGAGCAGACACCAACCCCTCTTCAGCCCAGCTTCCTTCCTAAATGGCCTCATAAATaGAGGAAAAATCGAACCTTA | + |
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Preference number: 2 (lower is better) Translates to: MCCEGEQTPTPLQPSFLPKWPHK*RKNRTL Trigger: TAAGGTTCGATTTTTCCTCCATTTATGAGGCCATTT...AGGAAGGAAGCTGGGCTGAAGAGGGGTTGGTGTCTGCTCACCCTCACAGCACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTGAGCACGTTGGAAAGCGACATTTTCCTATGGTTCAGGACCACAGAACCTCTCCCCTTGAATTTTaGTTCTTACCTCTCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: FSEHVGKRHFPMVQDHRTSPLEF*FLPLCT Trigger: TGTGCAGAGAGGTAAGAAGCAAAATTCAAGGGGAGA...GGTTCTGTGGTCCTGAACCATAGGAAAATGTCGCTTTCCAACGTGCTCACTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTTATCACCAAATCACATTCCCAGCCCTCACAGATTATTTTTAAAGCCTGGCGAACCTTACATGACCTaGCCAGAACCATCTAACTGC | + |
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Preference number: 2 (lower is better) Translates to: FLSPNHIPSPHRLFLKPGEPYMT*PEPSNC Trigger: GCAGTTAGATGGTTCTGGCCAGGTCATGTAAGGTTC...GCCAGGCTTTAAAAATAATCTGTGAGGGCTGGGAATGTGATTTGGTGATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR CCA 72 bp | CCAGGAGGGAGGACAAGGGTCAAAAGCTTCCTGGTCTaGGTATCAGAAGCTGTAAGGAAACCTGCACCCCCA | + |
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Preference number: 3 (lower is better) Translates to: PGGRTRVKSFLV*VSEAVRKPAPP Trigger: TGGGGGTGCAGGTTTCCTTACAGCTTCTGATACCCAGACCAGGAAGCTTTTGACCCTTGTCCTCCCTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR TCA 72 bp | GAGAAACGGAGCGTTGCTTCAAGCCGGGGCCGCTGCTaGCACTTAGAACGAAAGCTGGCTAGAAATGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: EKRSVASSRGRC*HLERKLARNVF Trigger: GAAGACATTTCTAGCCAGCTTTCGTTCTAAGTGTCAGCAGCGGCCCCGGCTTGAAGCAACGCTCCGTTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR TCA 72 bp | GGATGCAAGGCAGTCGGTCGGTCTGCTGTCTCCCCTTaGATTTTGCTTCTTACCTCTCTGCACAGGACACAG | + |
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Preference number: 3 (lower is better) Translates to: GCKAVGRSAVSP*ILLLTSLHRTQ Trigger: CTGTGTCCTGTGCAGAGAGGTAAGAAGCAAAATTCAAGGGGAGACAGCAGACCGACCGACTGCCTTGCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR GCA 72 bp | AGGCAGTCGGTCGGTCTGCTGTCTCCCCTTGAATTTTaGTTCTTACCTCTCTGCACAGGACACAGAGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RQSVGLLSPLEF*FLPLCTGHRGE Trigger: CTCACCTCTGTGTCCTGTGCAGAGAGGTAAGAAGCAAAATTCAAGGGGAGACAGCAGACCGACCGACTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR CCA 72 bp | GGGGTAATATTGCCCCCTGGTGGTTATCAAGCACCATaGCACACAGAGCCCAACCCTGAGAAACTGCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: GVILPPGGYQAP*HTEPNPEKLPS Trigger: AGAAGGCAGTTTCTCAGGGTTGGGCTCTGTGTGCCATGGTGCTTGATAACCACCAGGGGGCAATATTACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR TCA 72 bp | TTTTCTAACTGTGGCTGTCTGAAAGCCAACTTGAACTaGGAAACGGAGCGTTGCTTCAAGCCGGGGCCGCTG | + |
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Preference number: 3 (lower is better) Translates to: FSNCGCLKANLN*ETERCFKPGPL Trigger: CAGCGGCCCCGGCTTGAAGCAACGCTCCGTTTCTCAGTTCAAGTTGGCTTTCAGACAGCCACAGTTAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR CCA 72 bp | CTCTGCACAGGACACAGAGGTGAGCTCTACAGAGCTTaGAGAATCTTCAACCTTCTGCCCCAGAATAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LCTGHRGELYRA*RIFNLLPQNSH Trigger: GTGGCTATTCTGGGGCAGAAGGTTGAAGATTCTCCAAGCTCTGTAGAGCTCACCTCTGTGTCCTGTGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR GCA 72 bp | CTGCTGTCTCCCCTTGAATTTTGCTTCTTACCTCTCTaGACAGGACACAGAGGTGAGCTCTACAGAGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LLSPLEFCFLPL*TGHRGELYRAW Trigger: CCAAGCTCTGTAGAGCTCACCTCTGTGTCCTGTGCAGAGAGGTAAGAAGCAAAATTCAAGGGGAGACAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR CCA 72 bp | GCTTCCGAAAACACGGAACCCTTAGTAGGCAACTTGTaGGGTAATATTGCCCCCTGGTGGTTATCAAGCACC | + |
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Preference number: 3 (lower is better) Translates to: ASENTEPLVGNL*GNIAPWWLSST Trigger: GGTGCTTGATAACCACCAGGGGGCAATATTACCCCACAAGTTGCCTACTAAGGGTTCCGTGTTTTCGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR GCA 72 bp | GTGAGCTCTACAGAGCTTGGAGAATCTTCAACCTTCTaGCCCAGAATAGCCACTACCTCTTCTCATGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: VSSTELGESSTF*PRIATTSSHGH Trigger: ATGCCCATGAGAAGAGGTAGTGGCTATTCTGGGGCAGAAGGTTGAAGATTCTCCAAGCTCTGTAGAGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR TCA 72 bp | CTCTTGCCCTGTTCTCCTCATCAGACTAAAGCGGTGTaGATACTCACTGTCAAGCACTTGAGAGATCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: LLPCSPHQTKAV*ILTVKHLRDPY Trigger: ATAGGGATCTCTCAAGTGCTTGACAGTGAGTATTCACACCGCTTTAGTCTGATGAGGAGAACAGGGCAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR TCA 72 bp | ACAGAGCCCAACCCTGAGAAACTGCCTTCTCTACCCTaGGCGATTCTATTAATAAATAGCTCTGAGAACCTC | + |
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Preference number: 3 (lower is better) Translates to: TEPNPEKLPSLP*AILLINSSENL Trigger: GAGGTTCTCAGAGCTATTTATTAATAGAATCGCTCAGGGTAGAGAAGGCAGTTTCTCAGGGTTGGGCTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR TCA 72 bp | ATTTTGCTTCTTACCTCTCTGCACAGGACACAGAGGTaGGCTCTACAGAGCTTGGAGAATCTTCAACCTTCT | + |
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Preference number: 3 (lower is better) Translates to: ILLLTSLHRTQR*ALQSLENLQPS Trigger: AGAAGGTTGAAGATTCTCCAAGCTCTGTAGAGCTCACCTCTGTGTCCTGTGCAGAGAGGTAAGAAGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR CCA 72 bp | CTCATAAATGGAGGAAAAATCGAACCTTACATGACCTaGCCAGAACCATCTAACTGCTCAACTTGTAGTACC | + |
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Preference number: 3 (lower is better) Translates to: LINGGKIEPYMT*PEPSNCSTCST Trigger: GGTACTACAAGTTGAGCAGTTAGATGGTTCTGGCCAGGTCATGTAAGGTTCGATTTTTCCTCCATTTATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR-3UTR CAA 90 bp | GCACGTTGGAAAGCGACATTTTCCTATGGTTCAGGACCACAGAACCATGGATATAATAAAAGGCTGACTTaGGTAAAGTCCTCATTGCTT | + |
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Preference number: 3 (lower is better) Translates to: ARWKATFSYGSGPQNHGYNKRLT*VKSSLL Trigger: AAGCAATGAGGACTTTACCAAAGTCAGCCTTTTATT...ATATCCATGGTTCTGTGGTCCTGAACCATAGGAAAATGTCGCTTTCCAACGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTCCTCCAAAGGCTCAGATCAAACATGCCAAATGGAGCTTTACAAATAAATTGGTAAAGTCCTCATaGCTTCCGAAAACACGGAAC | + |
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Preference number: 3 (lower is better) Translates to: ILPPKAQIKHAKWSFTNKLVKSS*LPKTRN Trigger: GTTCCGTGTTTTCGGAAGCAATGAGGACTTTACCAA...TTTATTTGTAAAGCTCCATTTGGCATGTTTGATCTGAGCCTTTGGAGGAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR CCA 72 bp | ATTCTTCCTCCAAAGGCTCAGATCAAACATGCCAAATaGAGCTTTACAAATAAAAGGCTGACTTTGGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: ILPPKAQIKHAK*SFTNKRLTLVK Trigger: CTTTACCAAAGTCAGCCTTTTATTTGTAAAGCTCCATTTGGCATGTTTGATCTGAGCCTTTGGAGGAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | ATGTGCTGTGAGGGTGAGCAGACACCAACCCCTCTTCAGCCCAGCTTCCTTCCTCGTCCACGATGCGACTaGTGTAGGGGTCGTGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: MCCEGEQTPTPLQPSFLPRPRCD*CRGRGA Trigger: GGCGCCACGACCCCTACATCAGTCGCATCGTGGACG...AGGAAGGAAGCTGGGCTGAAGAGGGGTTGGTGTCTGCTCACCCTCACAGCACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR GCA 90 bp | CAGCCGATGTGCTGTGAGGGTGAGCAGACACCAACCCCTCTTCAGCCCAGCTTCTTCCTTAGCAGCTCCTaGGTAGGGAGCACGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QPMCCEGEQTPTPLQPSFFLSSS*VGSTVG Trigger: CCCCACCGTGCTCCCTACGCAGGAGCTGCTAAGGAA...GAAGCTGGGCTGAAGAGGGGTTGGTGTCTGCTCACCCTCACAGCACATCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | ATGTGCTGTGAGGGTGAGCAGACACCAACCCCTCTTCAGCCCAGCTTCCTTCCTCTTCTCCACCGGGAGTaGGAGCTTCCTGGGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: MCCEGEQTPTPLQPSFLPLLHRE*ELPGLL Trigger: GAGGAGCCCAGGAAGCTCTCACTCCCGGTGGAGAAG...AGGAAGGAAGCTGGGCTGAAGAGGGGTTGGTGTCTGCTCACCCTCACAGCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | ATGTGCTGTGAGGGTGAGCAGACACCAACCCCTCTTCAGCCCAGCTTCCTTCCTCACCCTGCTCCTTCCTaGGAGCTTGGTGTCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: MCCEGEQTPTPLQPSFLPHPAPS*ELGVLG Trigger: CCCCAGGACACCAAGCTCTCAGGAAGGAGCAGGGTG...AGGAAGGAAGCTGGGCTGAAGAGGGGTTGGTGTCTGCTCACCCTCACAGCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR GCA 90 bp | CATGCTGCTGCCAGGAGGGAGGACAAGGGTCAAAAGCTTCCTGGTCTGGGTATCCGCTTGTGCAGGCAGTaGACCCTGCTCCTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HAAARREDKGQKLPGLGIRLCRQ*TLLLPE Trigger: CTCAGGAAGGAGCAGGGTGCACTGCCTGCACAAGCG...GATACCCAGACCAGGAAGCTTTTGACCCTTGTCCTCCCTCCTGGCAGCAGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR GCA 90 bp | CATGCTGCTGCCAGGAGGGAGGACAAGGGTCAAAAGCTTCCTGGTCTGGGTATCGATGAGGTTCAGCAGTaGCTCCTGGAGCTGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: HAAARREDKGQKLPGLGIDEVQQ*LLELQP Trigger: AGGCTGCAGCTCCAGGAGGCACTGCTGAACCTCATC...GATACCCAGACCAGGAAGCTTTTGACCCTTGTCCTCCCTCCTGGCAGCAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | TCTTCAGCCCAGCTTCCTTCCTTAGGGAAAGCACGCCCTCCTAAGGGAGAGGTGGCAGCAGGAAGTTCTTaGCCTCCTAGGGCCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: SSAQLPSLGKARPPKGEVAAGSS*PPRAMS Trigger: GCTCATGGCCCTAGGAGGCCAAGAACTTCCTGCTGC...CACCTCTCCCTTAGGAGGGCGTGCTTTCCCTAAGGAAGGAAGCTGGGCTGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | CAAGGCAGTCGGTCGGTCTGCTGTCTCCCCTTGAATTTTGCTTCTTACCTCTCTGCAGGGCTGCCAGGCTaGTATCGTGTCCCTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QGSRSVCCLPLNFASYLSAGLPG*YRVPSQ Trigger: CTGGGAAGGGACACGATATCAGCCTGGCAGCCCTGC...AGAGAGGTAAGAAGCAAAATTCAAGGGGAGACAGCAGACCGACCGACTGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | TCTTCAGCCCAGCTTCCTTCCTTAGGGAAAGCACGCCCTCCTAAGGGAGAGGTGTCTTCTCCCACTCGTTaGCCCGATGGCCGAAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: SSAQLPSLGKARPPKGEVSSPTR*PDGRKC Trigger: ACACTTTCGGCCATCGGGCCAACGAGTGGGAGAAGA...CACCTCTCCCTTAGGAGGGCGTGCTTTCCCTAAGGAAGGAAGCTGGGCTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | GCTTGGAGAATCTTCAACCTTCTGCCCCAGAATAGCCACTACCTCTTCTCATGGCCTGGGGCGGGAGGTTaGAGGGGGCCACTGAAATAC | + |
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Preference number: 4 (lower is better) Translates to: AWRIFNLLPQNSHYLFSWPGAGG*RGPLKY Trigger: GTATTTCAGTGGCCCCCTTCAACCTCCCGCCCCAGG...CCATGAGAAGAGGTAGTGGCTATTCTGGGGCAGAAGGTTGAAGATTCTCCAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | CAAGGCAGTCGGTCGGTCTGCTGTCTCCCCTTGAATTTTGCTTCTTACCTCTCTGGCCTCCTAGGGCCATaGGCCCATTATCAGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: QGSRSVCCLPLNFASYLSGLLGP*AHYQSP Trigger: GGGAGACTGATAATGGGCTCATGGCCCTAGGAGGCC...AGAGAGGTAAGAAGCAAAATTCAAGGGGAGACAGCAGACCGACCGACTGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | CAAGGCAGTCGGTCGGTCTGCTGTCTCCCCTTGAATTTTGCTTCTTACCTCTCTCAGGGGGACCCCAGCTaGACAGGACCAGGGAGAATT | + |
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Preference number: 4 (lower is better) Translates to: QGSRSVCCLPLNFASYLSQGDPS*TGPGRI Trigger: AATTCTCCCTGGTCCTGTCCAGCTGGGGTCCCCCTG...AGAGAGGTAAGAAGCAAAATTCAAGGGGAGACAGCAGACCGACCGACTGCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | GAGGACAAGGGTCAAAAGCTTCCTGGTCTGGGTATCAGAAGCTGTAAGGAAACCGAGAGCTTGGTGTCCTaGGGCGGGAGGTTGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: EDKGQKLPGLGIRSCKETESLVS*GGRLKG Trigger: CCCCTTCAACCTCCCGCCCCAGGACACCAAGCTCTC...GGTTTCCTTACAGCTTCTGATACCCAGACCAGGAAGCTTTTGACCCTTGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | GCTTGGAGAATCTTCAACCTTCTGCCCCAGAATAGCCACTACCTCTTCTCATGGGTGTACAGAGCCACCTaGCTGGCCACGTCCACGATG | + |
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Preference number: 4 (lower is better) Translates to: AWRIFNLLPQNSHYLFSWVYRAT*LATSTM Trigger: CATCGTGGACGTGGCCAGCCAGGTGGCTCTGTACAC...CCATGAGAAGAGGTAGTGGCTATTCTGGGGCAGAAGGTTGAAGATTCTCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| 3UTR CAA 72 bp | GGGATGCAAGGCAGTCGGTCGGTCTGCTGTCTCCCCTaGAATTTTGCTTCTTACCTCTCTGCACAGGACACA | + |
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Preference number: 4 (lower is better) Translates to: GMQGSRSVCCLP*NFASYLSAQDT Trigger: TGTGTCCTGTGCAGAGAGGTAAGAAGCAAAATTCAAGGGGAGACAGCAGACCGACCGACTGCCTTGCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | GAGGACAAGGGTCAAAAGCTTCCTGGTCTGGGTATCAGAAGCTGTAAGGAAACCTACACCAGCTGTGATTaGGCCACACTCTGGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: EDKGQKLPGLGIRSCKETYTSCD*ATLWPG Trigger: TCCGGGCCAGAGTGTGGCCCAATCACAGCTGGTGTA...GGTTTCCTTACAGCTTCTGATACCCAGACCAGGAAGCTTTTGACCCTTGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCACTGTTCAGGGTGCTaGGGCAGGGGGTGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSHCSGC*GRGCSP Trigger: GGGGCTGCACCCCCTGCCTCAGCACCCTGAACAGTG...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTCACTGTTCAGGGTGCTaGGGCAGGGGGTGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VFGHTSSHEEPGRSILSLHCSGC*GRGCSP Trigger: GGGGCTGCACCCCCTGCCTCAGCACCCTGAACAGTG...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTCGTCCACGATGCGACTaGTGTAGGGGTCGTGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: VFGHTSSHEEPGRSILSLRPRCD*CRGRGA Trigger: GGCGCCACGACCCCTACATCAGTCGCATCGTGGACG...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTCCGGGCTCCCGAGCATaGGTTTCTGAATGGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VFGHTSSHEEPGRSILSLPGSRA*VSEWPG Trigger: GCCCGGCCATTCAGAAACTCATGCTCGGGAGCCCGG...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR GCA 90 bp | TCTTCAGCCCAGCTTCCTTCCTTAGGGAAAGCACGCCCTCCTAAGGGAGAGGTGCATAAATGGACAGTGTaGCGTTTCTGTAGAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSAQLPSLGKARPPKGEVHKWTV*RFCREG Trigger: TCCTTCTCTACAGAAACGGCACACTGTCCATTTATG...CACCTCTCCCTTAGGAGGGCGTGCTTTCCCTAAGGAAGGAAGCTGGGCTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCTCTGGGCGCAGGTCCTTaGAGCCTCTGGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVTPVHMKNLEDQFLVFALGAGP*SLWLLL Trigger: CAGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAG...AGCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | GAGGACAAGGGTCAAAAGCTTCCTGGTCTGGGTATCAGAAGCTGTAAGGAAACCTGCAAGTGCTCTGTGTaGAGTGTGCAACCCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EDKGQKLPGLGIRSCKETCKCSV*SVQPCH Trigger: ATGGCAGGGTTGCACACTGCACACAGAGCACTTGCA...GGTTTCCTTACAGCTTCTGATACCCAGACCAGGAAGCTTTTGACCCTTGTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGGAGAATCTTCAACCTTCTGCCCCAGAATAGCCACTACCTCTTCTCATGGTGTGGCCTCTGCAAGTaGTCTGTGTGCAGTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AWRIFNLLPQNSHYLFSWCGLCK*SVCSVQ Trigger: TTGCACACTGCACACAGAGCACTTGCAGAGGCCACA...CCATGAGAAGAGGTAGTGGCTATTCTGGGGCAGAAGGTTGAAGATTCTCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | TTAGAACGAAAGCTGGCTAGAAATGTCTTCAGAAAGATTCTTCCTCCAAAGGCTGGAGCACGGTGGGGCTaGTCTCCTGGCTGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LERKLARNVFRKILPPKAGARWG*SPGCQR Trigger: TCTCTGGCAGCCAGGAGAGCAGCCCCACCGTGCTCC...AGCCTTTGGAGGAAGAATCTTTCTGAAGACATTTCTAGCCAGCTTTCGTTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | GAGAACCTCCCTTCGCATGAAAAACTCTACTCTTCCTCAAATGGCCTCATAAATGAGGACTCCCAGTTCTaGAGGGGCAGGAGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENLPSHEKLYSSSNGLINEDSQF*RGRRRL Trigger: CAGCCTCCTCCTGCCCCTGCAGAACTGGGAGTCCTC...ATTTATGAGGCCATTTGAGGAAGAGTAGAGTTTTTCATGCGAAGGGAGGTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | GAGAACCTCCCTTCGCATGAAAAACTCTACTCTTCCTCAAATGGCCTCATAAATGGTCCTTGCAGCCTCTaGCTGCTGCTGGGTCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: ENLPSHEKLYSSSNGLINGPCSL*LLLGLT Trigger: CGTGAGACCCAGCAGCAGCCAGAGGCTGCAAGGACC...ATTTATGAGGCCATTTGAGGAAGAGTAGAGTTTTTCATGCGAAGGGAGGTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCGGTCCGAGGTCTTGCTaGGCGCAGGTCCTTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FGHTSSHEEPGRSILSLCGPRSC*AQVLAA Trigger: GGCTGCAAGGACCTGCGCCCAGCAAGACCTCGGACC...GCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTGGTCCGAGGTCTTGCTaGGCGCAGGTCCTTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VFGHTSSHEEPGRSILSLGPRSC*AQVLAA Trigger: GGCTGCAAGGACCTGCGCCCAGCAAGACCTCGGACC...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCCTGACACAGGGAACCTaGCTGCCAAGGCTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGHTSSHEEPGRSILSLCLTQGT*LPRLAG Trigger: CCCGGCCAGCCTTGGCAGCCAGGTTCCCTGTGTCAG...GCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTGCAGGGCTGCCAGGCTaGTATCGTGTCCCTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSAGLPG*YRVPSQ Trigger: CTGGGAAGGGACACGATATCAGCCTGGCAGCCCTGC...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | GAGAACCTCCCTTCGCATGAAAAACTCTACTCTTCCTCAAATGGCCTCATAAATTTCTTGGCCCTCTCCTaGGCTCAAGGTCACGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ENLPSHEKLYSSSNGLINFLALS*AQGHGG Trigger: TCCCCCGTGACCTTGAGCTCAGGAGAGGGCCAAGAA...ATTTATGAGGCCATTTGAGGAAGAGTAGAGTTTTTCATGCGAAGGGAGGTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCCCTGGGGCGGGAGGTTaGAGGGGGCCACTGAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: FGHTSSHEEPGRSILSLCPGAGG*RGPLKY Trigger: GTATTTCAGTGGCCCCCTTCAACCTCCCGCCCCAGG...GCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCCACCCTGCTCCTTCCTaGGAGCTTGGTGTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGHTSSHEEPGRSILSLCHPAPS*ELGVLG Trigger: CCCCAGGACACCAAGCTCTCAGGAAGGAGCAGGGTG...GCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTGGCTGCTCTCCTGGCTaGCAGAGAGGGACACCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSGCSPG*QRGTPL Trigger: AAGCGGTGTCCCTCTCTGGCAGCCAGGAGAGCAGCC...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGCATAAGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCATTCCTTAGCAGCTCCTaGGTAGGGAGCACGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGISVFGHTSSHEEPGRSFLSSS*VGSTVG Trigger: CCCCACCGTGCTCCCTACGCAGGAGCTGCTAAGGAA...TGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTATGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | ATCGAACCTTACATGACCTGGCCAGAACCATCTAACTGCTCAACTTGTAGTACCTGCAGAAGAGGAGCCTaGTTCTCCATGCTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IEPYMTWPEPSNCSTCSTCRRGA*FSMLAV Trigger: GACAGCCAGCATGGAGAAGCAGGCTCCTCTTCTGCA...GGTACTACAAGTTGAGCAGTTAGATGGTTCTGGCCAGGTCATGTAAGGTTCGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCTACAGAGCCACCTGGCTaGCCACGTCCACGATGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVTPVHMKNLEDQFLVFATEPPG*PRPRCD Trigger: GTCGCATCGTGGACGTGGCCAGCCAGGTGGCTCTGT...AGCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCTGGTCCTTGCAGCCTCTaGCTGCTGCTGGGTCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LVTPVHMKNLEDQFLVFAGPCSL*LLLGLT Trigger: CGTGAGACCCAGCAGCAGCCAGAGGCTGCAAGGACC...AGCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | GAGAACCTCCCTTCGCATGAAAAACTCTACTCTTCCTCAAATGGCCTCATAAATGGAGTGAGAGCTTCCTaGGCTCCTCACAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENLPSHEKLYSSSNGLINGVRAS*APHRTG Trigger: CCCTGTCCTGTGAGGAGCCCAGGAAGCTCTCACTCC...ATTTATGAGGCCATTTGAGGAAGAGTAGAGTTTTTCATGCGAAGGGAGGTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCGAGAGCTTGGTGTCCTaGGGCGGGAGGTTGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGHTSSHEEPGRSILSLCESLVS*GGRLKG Trigger: CCCCTTCAACCTCCCGCCCCAGGACACCAAGCTCTC...GCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCGCCTGCTGGCCACGGTaGAGGACTCCCAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGHTSSHEEPGRSILSLCACWPR*RTPSSA Trigger: TGCAGAACTGGGAGTCCTCCACCGTGGCCAGCAGGC...GCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGCATAAGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCATTCAGCAGTGCCTCCTaGAGCTGCAGCCTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGISVFGHTSSHEEPGRSFSSAS*SCSLVR Trigger: CCTCACCAGGCTGCAGCTCCAGGAGGCACTGCTGAA...TGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTATGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTTTCTTGGCCCTCTCCTaGGCTCAAGGTCACGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSFLALS*AQGHGG Trigger: TCCCCCGTGACCTTGAGCTCAGGAGAGGGCCAAGAA...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | TTAGAACGAAAGCTGGCTAGAAATGTCTTCAGAAAGATTCTTCCTCCAAAGGCTCCGAGCATGAGTTTCTaGATGGCCGGGCAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LERKLARNVFRKILPPKAPSMSF*MAGQSC Trigger: GCAGCTCTGCCCGGCCATTCAGAAACTCATGCTCGG...AGCCTTTGGAGGAAGAATCTTTCTGAAGACATTTCTAGCCAGCTTTCGTTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | GCTTGGAGAATCTTCAACCTTCTGCCCCAGAATAGCCACTACCTCTTCTCATGGCTGCTTGTGTCACGCTaGAGAGATAGGCTTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AWRIFNLLPQNSHYLFSWLLVSR*RDRLHR Trigger: TCTATGAAGCCTATCTCTTCAGCGTGACACAAGCAG...CCATGAGAAGAGGTAGTGGCTATTCTGGGGCAGAAGGTTGAAGATTCTCCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTGGAGTGAGAGCTTCCTaGGCTCCTCACAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFGHTSSHEEPGRSILSLGVRAS*APHRTG Trigger: CCCTGTCCTGTGAGGAGCCCAGGAAGCTCTCACTCC...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | CTGTATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCCTGACACAGGGAACCTaGCTGCCAAGGCTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYHYTLLKRHKCVWSHQFLTQGT*LPRLAG Trigger: CCCGGCCAGCCTTGGCAGCCAGGTTCCCTGTGTCAG...GAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTATCACCAAATCACATTCCCAGCCCTCACAGATTATTTTTAAAGCCTGGCGCCTGCTGGCCACGGTaGAGGACTCCCAGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSPNHIPSPHRLFLKPGACWPR*RTPSSA Trigger: TGCAGAACTGGGAGTCCTCCACCGTGGCCAGCAGGC...GCCAGGCTTTAAAAATAATCTGTGAGGGCTGGGAATGTGATTTGGTGATAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | CTGTATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCCTTCTCCACCGGGAGTaGGAGCTTCCTGGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYHYTLLKRHKCVWSHQFLLHRE*ELPGLL Trigger: GAGGAGCCCAGGAAGCTCTCACTCCCGGTGGAGAAG...GAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | TATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCACACCGGGCTCCCGAGCATaGGTTTCTGAATGGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YHYTLLKRHKCVWSHQFTPGSRA*VSEWPG Trigger: GCCCGGCCATTCAGAAACTCATGCTCGGGAGCCCGG...TGTGAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTACAGGACAGGGAGCATaGGACCCCGTGATGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSTGQGA*DPVMNW Trigger: CCAGTTCATCACGGGGTCGCATGCTCCCTGTCCTGT...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | TTAGAACGAAAGCTGGCTAGAAATGTCTTCAGAAAGATTCTTCCTCCAAAGGCTACAGGACAGGGAGCATaGGACCCCGTGATGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LERKLARNVFRKILPPKATGQGA*DPVMNW Trigger: CCAGTTCATCACGGGGTCGCATGCTCCCTGTCCTGT...AGCCTTTGGAGGAAGAATCTTTCTGAAGACATTTCTAGCCAGCTTTCGTTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTTCCTCCAAAGGCTCAGATCAAACATGCCAAATGGAGCTTTACAAATAAAGGCTGCTCTCCTGGCTaGCAGAGAGGGACACCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPPKAQIKHAKWSFTNKGCSPG*QRGTPL Trigger: AAGCGGTGTCCCTCTCTGGCAGCCAGGAGAGCAGCC...TTTATTTGTAAAGCTCCATTTGGCATGTTTGATCTGAGCCTTTGGAGGAAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | TATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCACAGGAGCACGGTGGGGCTaGTCTCCTGGCTGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YHYTLLKRHKCVWSHQFTGARWG*SPGCQR Trigger: TCTCTGGCAGCCAGGAGAGCAGCCCCACCGTGCTCC...TGTGAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCACTCGTTGGCCCGATaGCCGAAAGTGTACAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSHSLAR*PKVYRA Trigger: GGCTCTGTACACTTTCGGCCATCGGGCCAACGAGTG...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTCAGGGGGACCCCAGCTaGACAGGACCAGGGAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: ISVFGHTSSHEEPGRSILQGDPS*TGPGRI Trigger: AATTCTCCCTGGTCCTGTCCAGCTGGGGTCCCCCTG...AAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCTTACACCAGCTGTGATTaGGCCACACTCTGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVTPVHMKNLEDQFLVFAYTSCD*ATLWPG Trigger: TCCGGGCCAGAGTGTGGCCCAATCACAGCTGGTGTA...AGCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTTCTGTCCCTGATCCCTaGGCTGACACAGGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSSVPDP*ADTGNL Trigger: CAGGTTCCCTGTGTCAGCCCAGGGATCAGGGACAGA...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | CTGTATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCCCGAGCATGAGTTTCTaGATGGCCGGGCAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYHYTLLKRHKCVWSHQFPSMSF*MAGQSC Trigger: GCAGCTCTGCCCGGCCATTCAGAAACTCATGCTCGG...GAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCTTGCAGAAGAGGAGCCTaGTTCTCCATGCTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVTPVHMKNLEDQFLVFACRRGA*FSMLAV Trigger: GACAGCCAGCATGGAGAAGCAGGCTCCTCTTCTGCA...AGCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTGAGGACTCCCAGTTCTaGAGAAGAGGAGCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFGHTSSHEEPGRSILSLEDSQF*RRGACF Trigger: GAAGCAGGCTCCTCTTCTGCAGAACTGGGAGTCCTC...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073909.6 |
||
| CDS-3UTR CCA 90 bp | TATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCACAACAGAGCCACCTGGCTaGCCACGTCCACGATGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: YHYTLLKRHKCVWSHQFTTEPPG*PRPRCD Trigger: GTCGCATCGTGGACGTGGCCAGCCAGGTGGCTCTGT...TGTGAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | CTGTATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCGTGTACAGAGCCACCTaGCTGGCCACGTCCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: LYHYTLLKRHKCVWSHQFVYRAT*LATSTM Trigger: CATCGTGGACGTGGCCAGCCAGGTGGCTCTGTACAC...GAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTTCTGTCCCTGATCCCTaGGCTGACACAGGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVFGHTSSHEEPGRSILSVPDP*ADTGNL Trigger: CAGGTTCCCTGTGTCAGCCCAGGGATCAGGGACAGA...AAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | CTGTATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCTTCAGCAGTGCCTCCTaGAGCTGCAGCCTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYHYTLLKRHKCVWSHQFFSSAS*SCSLVR Trigger: CCTCACCAGGCTGCAGCTCCAGGAGGCACTGCTGAA...GAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTGTTAAAGATAAGTGCTaGGGCTCAGGGTCCGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFGHTSSHEEPGRSILSLVKDKC*GSGSEV Trigger: GACCTCGGACCCTGAGCCTCAGCACTTATCTTTAAC...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTGTTAAAGATAAGTGCTaGGGCTCAGGGTCCGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSVKDKC*GSGSEV Trigger: GACCTCGGACCCTGAGCCTCAGCACTTATCTTTAAC...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR GCA 90 bp | TTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCTTGTGGCCTCTGCAAGTaGTCTGTGTGCAGTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVTPVHMKNLEDQFLVFACGLCK*SVCSVQ Trigger: TTGCACACTGCACACAGAGCACTTGCAGAGGCCACA...AGCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | TATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCACACGCTTGTGCAGGCAGTaGACCCTGCTCCTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YHYTLLKRHKCVWSHQFTRLCRQ*TLLLPE Trigger: CTCAGGAAGGAGCAGGGTGCACTGCCTGCACAAGCG...TGTGAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | CTGTATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCGATGAGGTTCAGCAGTaGCTCCTGGAGCTGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYHYTLLKRHKCVWSHQFDEVQQ*LLELQP Trigger: AGGCTGCAGCTCCAGGAGGCACTGCTGAACCTCATC...GAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTTCCTCCAAAGGCTCAGATCAAACATGCCAAATGGAGCTTTACAAATAAAGGGGCACAGGTAGACTaGAGAAGAGGAGCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILPPKAQIKHAKWSFTNKGAQVD*RRGACF Trigger: GAAGCAGGCTCCTCTTCTGCAGTCTACCTGTGCCCC...TTTATTTGTAAAGCTCCATTTGGCATGTTTGATCTGAGCCTTTGGAGGAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCCATCCTTGGCCTTGGTaGGCATCTGCAGGATATCTA | + |
|
Preference number: 4 (lower is better) Translates to: FGHTSSHEEPGRSILSLCHPWPW*ASAGYL Trigger: TAGATATCCTGCAGATGCTCACCAAGGCCAAGGATG...GCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | AAAGGCATAAGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCACTGCTTGTGTCACGCTaGAGAGATAGGCTTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGISVFGHTSSHEEPGRSLLVSR*RDRLHR Trigger: TCTATGAAGCCTATCTCTTCAGCGTGACACAAGCAG...TGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTATGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTATAATGGTGAATCCGTaGTTTGGGGAGGCAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSIMVNP*FGEADL Trigger: GAGGTCTGCCTCCCCAAAGCACGGATTCACCATTAT...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | CTGTATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCTCTTCTCCCACTCGTTaGCCCGATGGCCGAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYHYTLLKRHKCVWSHQFSSPTR*PDGRKC Trigger: ACACTTTCGGCCATCGGGCCAACGAGTGGGAGAAGA...GAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CCA 90 bp | GAGAACCTCCCTTCGCATGAAAAACTCTACTCTTCCTCAAATGGCCTCATAAATAGGATATCTACTTCTTaGCCCTCTCCTGAGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ENLPSHEKLYSSSNGLINRISTS*PSPELK Trigger: CTTGAGCTCAGGAGAGGGCCAAGAAGTAGATATCCT...ATTTATGAGGCCATTTGAGGAAGAGTAGAGTTTTTCATGCGAAGGGAGGTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS-3UTR GCA 90 bp | CTGTATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCTGCAAGTGCTCTGTGTaGAGTGTGCAACCCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYHYTLLKRHKCVWSHQFCKCSV*SVQPCH Trigger: ATGGCAGGGTTGCACACTGCACACAGAGCACTTGCA...GAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTAGGATATCTACTTCTTaGCCCTCTCCTGAGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVFGHTSSHEEPGRSILSRISTS*PSPELK Trigger: CTTGAGCTCAGGAGAGGGCCAAGAAGTAGATATCCT...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTAAAGGGTTCTGGAGCTaGAAGTCCAGGTCTTTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VFGHTSSHEEPGRSILSLKGFWS*KSRSLV Trigger: TACTAAAGACCTGGACTTCCAGCTCCAGAACCCTTT...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | TTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCTAACAGGTCTTACACTTaGTGTACTCATCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTPVHMKNLEDQFLVFANRSYT*CTHPWP Trigger: AGGCCAAGGATGAGTACACCAAGTGTAAGACCTGTT...AGCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | TTAGAACGAAAGCTGGCTAGAAATGTCTTCAGAAAGATTCTTCCTCCAAAGGCTAACAGGTCTTACACTTaGTGTACTCATCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LERKLARNVFRKILPPKANRSYT*CTHPWP Trigger: AGGCCAAGGATGAGTACACCAAGTGTAAGACCTGTT...AGCCTTTGGAGGAAGAATCTTTCTGAAGACATTTCTAGCCAGCTTTCGTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR TCA 90 bp | TATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCACACATCCTTGGCCTTGGTaGGCATCTGCAGGATATCTA | + |
|
Preference number: 4 (lower is better) Translates to: YHYTLLKRHKCVWSHQFTHPWPW*ASAGYL Trigger: TAGATATCCTGCAGATGCTCACCAAGGCCAAGGATG...TGTGAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR GCA 90 bp | TATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCACAATAATGGTGAATCCGTaGTTTGGGGAGGCAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: YHYTLLKRHKCVWSHQFTIMVNP*FGEADL Trigger: GAGGTCTGCCTCCCCAAAGCACGGATTCACCATTAT...TGTGAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR CCA 90 bp | ATAAGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAAAGGGTTCTGGAGCTaGAAGTCCAGGTCTTTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISVFGHTSSHEEPGRSILKGFWS*KSRSLV Trigger: TACTAAAGACCTGGACTTCCAGCTCCAGAACCCTTT...AAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR TCA 90 bp | CTGTATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCACTGTTCGCTCTGAGTaGGGTTTTTCATTAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYHYTLLKRHKCVWSHQFTVRSE*GFSLVL Trigger: CAAAACTAATGAAAAACCTCACTCAGAGCGAACAGT...GAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR GCA 90 bp | TATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCACACATAAATGGACAGTGTaGCGTTTCTGTAGAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YHYTLLKRHKCVWSHQFTHKWTV*RFCREG Trigger: TCCTTCTCTACAGAAACGGCACACTGTCCATTTATG...TGTGAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS GCA 90 bp | CACGTCCACGATGCGACTGATGTAGGGGTCGTGGCGCCGCAGGGCTaGCAGGCTGATATCGTGTCCCTTCCCAGGCAGGCCACCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HVHDATDVGVVAPQG*QADIVSLPRQATCR Trigger: GCGGCAGGTGGCCTGCCTGGGAAGGGACACGATATCAGCCTGGCAGCCCTGCGGCGCCACGACCCCTACATCAGTCGCATCGTGGACGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS TCA 90 bp | GTTCAGGGTGCTGAGGCAGGGGGTGCAGCCCCGGGCTCCCGAGCATaGGTTTCTGAATGGCCGGGCAGAGCTGCTTCTCCACCGGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQGAEAGGAAPGSRA*VSEWPGRAASPPGV Trigger: CACTCCCGGTGGAGAAGCAGCTCTGCCCGGCCATTCAGAAACTCATGCTCGGGAGCCCGGGGCTGCACCCCCTGCCTCAGCACCCTGAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS TCA 90 bp | TCCTGGGGCGGGAGGTTGAAGGGGGCCACTGAAATACACCAGCTGTaGTTGGGCCACACTCTGGCCCGGAGCCACCTGAGTGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SWGGRLKGATEIHQL*LGHTLARSHLSGHS Trigger: GCTGTGGCCACTCAGGTGGCTCCGGGCCAGAGTGTGGCCCAATCACAGCTGGTGTATTTCAGTGGCCCCCTTCAACCTCCCGCCCCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CCA 90 bp | CCTGGGCTCCTCACAGGACAGGGAGCATGCGACCCCGTGATGAACTaGACGCGTCTCTTGCTGCTGCTGGTGGTGATGGTGGTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLLTGQGACDPVMN*TRLLLLLVVMVVVV Trigger: CACCACCACCACCATCACCACCAGCAGCAGCAAGAGACGCGTCCAGTTCATCACGGGGTCGCATGCTCCCTGTCCTGTGAGGAGCCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CCA 90 bp | GAATGGCCGGGCAGAGCTGCTTCTCCACCGGGAGTGAGAGCTTCCTaGGCTCCTCACAGGACAGGGAGCATGCGACCCCGTGATGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: EWPGRAASPPGVRAS*APHRTGSMRPRDEL Trigger: CAGTTCATCACGGGGTCGCATGCTCCCTGTCCTGTGAGGAGCCCAGGAAGCTCTCACTCCCGGTGGAGAAGCAGCTCTGCCCGGCCATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS TCA 90 bp | CATGAGTTTCTGAATGGCCGGGCAGAGCTGCTTCTCCACCGGGAGTaGGAGCTTCCTGGGCTCCTCACAGGACAGGGAGCATGCGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: HEFLNGRAELLLHRE*ELPGLLTGQGACDP Trigger: GGGGTCGCATGCTCCCTGTCCTGTGAGGAGCCCAGGAAGCTCTCACTCCCGGTGGAGAAGCAGCTCTGCCCGGCCATTCAGAAACTCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CCA 90 bp | GGCTCAGGGTCCGAGGTCTTGCTGGGCGCAGGTCCTTGCAGCCTCTaGCTGCTGCTGGGTCTCACGGGGACAGGTTTGATAAGTTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGSEVLLGAGPCSL*LLLGLTGTGLISLG Trigger: CCCTAAACTTATCAAACCTGTCCCCGTGAGACCCAGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAGCAAGACCTCGGACCCTGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS TCA 90 bp | GCACCCTGCTCCTTCCTGAGAGCTTGGTGTCCTGGGGCGGGAGGTTaGAGGGGGCCACTGAAATACACCAGCTGTGATTGGGCCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: APCSFLRAWCPGAGG*RGPLKYTSCDWATL Trigger: GAGTGTGGCCCAATCACAGCTGGTGTATTTCAGTGGCCCCCTTCAACCTCCCGCCCCAGGACACCAAGCTCTCAGGAAGGAGCAGGGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CCA 90 bp | GTGCTGTTAAAGATAAGTGCTGAGGCTCAGGGTCCGAGGTCTTGCTaGGCGCAGGTCCTTGCAGCCTCTGGCTGCTGCTGGGTCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: VLLKISAEAQGPRSC*AQVLAASGCCWVSR Trigger: CCGTGAGACCCAGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAGCAAGACCTCGGACCCTGAGCCTCAGCACTTATCTTTAACAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS-3UTR CAA 90 bp | CAGCCGATGTGCTGTGAGGGTGAGCAGACACCAACCCCTCTTCAGCCCAGCTTCGTCTTCTCCCACTCGTaGGCCCGATGGCCGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPMCCEGEQTPTPLQPSFVFSHS*ARWPKV Trigger: CACTTTCGGCCATCGGGCCAACGAGTGGGAGAAGAC...GAAGCTGGGCTGAAGAGGGGTTGGTGTCTGCTCACCCTCACAGCACATCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
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| CDS GCA 90 bp | CTGCCCCAGGGGCACCTTGAAGCTGCTCTAATAGCTTGTGGCCTCTaGAAGTGCTCTGTGTGCAGTGTGCAACCCTGCCATTCCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPQGHLEAALIACGL*KCSVCSVQPCHSRG Trigger: CCCCCTGGAATGGCAGGGTTGCACACTGCACACAGAGCACTTGCAGAGGCCACAAGCTATTAGAGCAGCTTCAAGGTGCCCCTGGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS TCA 90 bp | AAATACACCAGCTGTGATTGGGCCACACTCTGGCCCGGAGCCACCTaGGTGGCCACAGCTGGACCGGTAGGCGCACAGGGGTTATACTTA | + |
|
Preference number: 5 (lower is better) Translates to: KYTSCDWATLWPGAT*VATAGPVGAQGLYL Trigger: TAAGTATAACCCCTGTGCGCCTACCGGTCCAGCTGTGGCCACTCAGGTGGCTCCGGGCCAGAGTGTGGCCCAATCACAGCTGGTGTATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS GCA 90 bp | ATAGCTTGTGGCCTCTGCAAGTGCTCTGTGTGCAGTGTGCAACCCTaGCATTCCAGGGGGACCCCAGCTGGACAGGACCAGGGAGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: IACGLCKCSVCSVQP*HSRGTPAGQDQGEF Trigger: GAATTCTCCCTGGTCCTGTCCAGCTGGGGTCCCCCTGGAATGGCAGGGTTGCACACTGCACACAGAGCACTTGCAGAGGCCACAAGCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CCA 90 bp | CTTAAGAAGTTGTCATCATTCTGGATGAGGTTCAGCAGTGCCTCCTaGAGCTGCAGCCTGGTGAGGGGCCTGCTGGCCACGGTGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LKKLSSFWMRFSSAS*SCSLVRGLLATVED Trigger: GTCCTCCACCGTGGCCAGCAGGCCCCTCACCAGGCTGCAGCTCCAGGAGGCACTGCTGAACCTCATCCAGAATGATGACAACTTCTTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS TCA 90 bp | AGTTCTGCAGAAGAGGAGCCTGCTTCTCCATGCTGGCTGTCTTGCTaGCCCAGGCTTCCAAGGGCTTTTCTGTCCCTGATCCCTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSAEEEPASPCWLSC*PRLPRAFLSLIPGL Trigger: CAGCCCAGGGATCAGGGACAGAAAAGCCCTTGGAAGCCTGGGTCAGCAAGACAGCCAGCATGGAGAAGCAGGCTCCTCTTCTGCAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073909.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAAGGGTCAAAAGCTTCCTGGTCTGGGTATCAGAAGCTGTAAGGAAACCTCAGGGTCCGAGGTCTaGCTGGGCGCAGGTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EDKGQKLPGLGIRSCKETSGSEV*LGAGPC Trigger: GCAAGGACCTGCGCCCAGCAAGACCTCGGACCCTGA...GGTTTCCTTACAGCTTCTGATACCCAGACCAGGAAGCTTTTGACCCTTGTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | TTTAGTGAGCACGTTGGAAAGCGACATTTTCCTATGGTTCAGGACCACAGAACCGCTGGGCGCAGGTCCTaGCAGCCTCTGGCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSEHVGKRHFPMVQDHRTAGRRS*QPLAAA Trigger: AGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAGC...GGTTCTGTGGTCCTGAACCATAGGAAAATGTCGCTTTCCAACGTGCTCACTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGTCGGTCGGTCTGCTGTCTCCCCTTGAATTTTGCTTCTTACCTCTCTCTGGGGCTGCCACTTTaGCAGGACCACTGTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGSRSVCCLPLNFASYLSLGLPL*QDHCSG Trigger: CCCTGAACAGTGGTCCTGCAAAAGTGGCAGCCCCAG...AGAGAGGTAAGAAGCAAAATTCAAGGGGAGACAGCAGACCGACCGACTGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | GAGGACAAGGGTCAAAAGCTTCCTGGTCTGGGTATCAGAAGCTGTAAGGAAACCAACTGGACGCGTCTCTaGCTGCTGCTGGTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: EDKGQKLPGLGIRSCKETNWTRL*LLLVVM Trigger: CATCACCACCAGCAGCAGCAAGAGACGCGTCCAGTT...GGTTTCCTTACAGCTTCTGATACCCAGACCAGGAAGCTTTTGACCCTTGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS GCA 90 bp | CAGGTCTTACACTTGGTGTACTCATCCTTGGCCTTGGTGAGCATCTaGAGGATATCTACTTCTTGGCCCTCTCCTGAGCTCAAGGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: QVLHLVYSSLALVSI*RISTSWPSPELKVT Trigger: CGTGACCTTGAGCTCAGGAGAGGGCCAAGAAGTAGATATCCTGCAGATGCTCACCAAGGCCAAGGATGAGTACACCAAGTGTAAGACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTGCTGGGCGCAGGTCCTaGCAGCCTCTGGCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVFGHTSSHEEPGRSILSAGRRS*QPLAAA Trigger: AGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAGC...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTTCAGGGTCCGAGGTCTaGCTGGGCGCAGGTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVFGHTSSHEEPGRSILSSGSEV*LGAGPC Trigger: GCAAGGACCTGCGCCCAGCAAGACCTCGGACCCTGA...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGCCCAGCTTCCTTCCTTAGGGAAAGCACGCCCTCCTAAGGGAGAGGTGGGTTTTTCATTAGTTTaGCAATTCTCTGGCACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSAQLPSLGKARPPKGEVGFSLV*QFSGTL Trigger: AAGAGTGCCAGAGAATTGCAAAACTAATGAAAAACC...CACCTCTCCCTTAGGAGGGCGTGCTTTCCCTAAGGAAGGAAGCTGGGCTGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGCATAAGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAAACTGGACGCGTCTCTaGCTGCTGCTGGTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KGISVFGHTSSHEEPGRSNWTRL*LLLVVM Trigger: CATCACCACCAGCAGCAGCAAGAGACGCGTCCAGTT...TGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTATGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTTCCTGGGGCGGGAGGTaGAAGGGGGCCACTGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: SVFGHTSSHEEPGRSILSSWGGR*KGATEI Trigger: TATTTCAGTGGCCCCCTTCAACCTCCCGCCCCAGGA...ACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTCTGGGGCTGCCACTTTaGCAGGACCACTGTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISVFGHTSSHEEPGRSILLGLPL*QDHCSG Trigger: CCCTGAACAGTGGTCCTGCAAAAGTGGCAGCCCCAG...AAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTATCACCAAATCACATTCCCAGCCCTCACAGATTATTTTTAAAGCCTGGCTCCTGGGGCGGGAGGTaGAAGGGGGCCACTGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: FLSPNHIPSPHRLFLKPGSWGGR*KGATEI Trigger: TATTTCAGTGGCCCCCTTCAACCTCCCGCCCCAGGA...GCCAGGCTTTAAAAATAATCTGTGAGGGCTGGGAATGTGATTTGGTGATAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS TCA 90 bp | GGGAGGATCCGGCTCCATGACAGGCTTTCAACTGTTCGCTCTGAGTaGGGTTTTTCATTAGTTTTGCAATTCTCTGGCACTCTTCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: GRIRLHDRLSTVRSE*GFSLVLQFSGTLPY Trigger: ATAAGGAAGAGTGCCAGAGAATTGCAAAACTAATGAAAAACCTCACTCAGAGCGAACAGTTGAAAGCCTGTCATGGAGCCGGATCCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CCA 90 bp | AAGTTTAGGGTTGTCACAGATGGCAGAGGAATTGGTCATCTGTTTTaGCTCGGAACAGGTCTTACACTTGGTGTACTCATCCTTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KFRVVTDGRGIGHLF*LGTGLTLGVLILGL Trigger: AAGGCCAAGGATGAGTACACCAAGTGTAAGACCTGTTCCGAGCCAAAACAGATGACCAATTCCTCTGCCATCTGTGACAACCCTAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGCATAAGTGTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCATTGGTGTACTCATCCTaGGCCTTGGTGAGCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KGISVFGHTSSHEEPGRSLVYSS*ALVSIC Trigger: GCAGATGCTCACCAAGGCCAAGGATGAGTACACCAA...TGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTATGCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | GAGAACCTCCCTTCGCATGAAAAACTCTACTCTTCCTCAAATGGCCTCATAAATTTGGTGTACTCATCCTaGGCCTTGGTGAGCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ENLPSHEKLYSSSNGLINLVYSS*ALVSIC Trigger: GCAGATGCTCACCAAGGCCAAGGATGAGTACACCAA...ATTTATGAGGCCATTTGAGGAAGAGTAGAGTTTTTCATGCGAAGGGAGGTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | GAGGACAAGGGTCAAAAGCTTCCTGGTCTGGGTATCAGAAGCTGTAAGGAAACCTTGATAAGTTTAGGGTaGTCACAGATGGCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EDKGQKLPGLGIRSCKETLISLG*SQMAEE Trigger: TTCCTCTGCCATCTGTGACAACCCTAAACTTATCAA...GGTTTCCTTACAGCTTCTGATACCCAGACCAGGAAGCTTTTGACCCTTGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | TATCACTATACTTTGTTAAAAAGGCATAAGTGTGTTTGGTCACACCAGTTCACAGTCTTCTCCCACTCGTaGGCCCGATGGCCGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: YHYTLLKRHKCVWSHQFTVFSHS*ARWPKV Trigger: CACTTTCGGCCATCGGGCCAACGAGTGGGAGAAGAC...TGTGAACTGGTGTGACCAAACACACTTATGCCTTTTTAACAAAGTATAGTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | TTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCTACTCATCCTTGGCCTaGGTGAGCATCTGCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: FGHTSSHEEPGRSILSLCYSSLA*VSICRI Trigger: TATCCTGCAGATGCTCACCAAGGCCAAGGATGAGTA...GCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | TTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTGCGGTTCTCATGGCTGCTaGTGTCACGCTGAAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: FGHTSSHEEPGRSILSLCGSHGC*CHAEEI Trigger: TATCTCTTCAGCGTGACACAAGCAGCCATGAGAACC...GCAAAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTTCCTCCAAAGGCTCAGATCAAACATGCCAAATGGAGCTTTACAAATAAAGGTTCTCATGGCTGCTaGTGTCACGCTGAAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: ILPPKAQIKHAKWSFTNKGSHGC*CHAEEI Trigger: TATCTCTTCAGCGTGACACAAGCAGCCATGAGAACC...TTTATTTGTAAAGCTCCATTTGGCATGTTTGATCTGAGCCTTTGGAGGAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTTTGATAAGTTTAGGGTaGTCACAGATGGCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFGHTSSHEEPGRSILSLLISLG*SQMAEE Trigger: TTCCTCTGCCATCTGTGACAACCCTAAACTTATCAA...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGGTCACACCAGTTCACATGAAGAACCTGGAAGATCAATTCTTAGTCTTGGTTTTTCATTAGTTTaGCAATTCTCTGGCACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VFGHTSSHEEPGRSILSLGFSLV*QFSGTL Trigger: AAGAGTGCCAGAGAATTGCAAAACTAATGAAAAACC...AAGACTAAGAATTGATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS TCA 72 bp | AGCTGTGATTGGGCCACACTCTGGCCCGGAGCCACCTaGGTGGCCACAGCTGGACCGGTAGGCGCACAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCDWATLWPGAT*VATAGPVGAQG Trigger: CCCCTGTGCGCCTACCGGTCCAGCTGTGGCCACTCAGGTGGCTCCGGGCCAGAGTGTGGCCCAATCACAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS GCA 72 bp | GGCTCAGGGTCCGAGGTCTTGCTGGGCGCAGGTCCTTaGAGCCTCTGGCTGCTGCTGGGTCTCACGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GSGSEVLLGAGP*SLWLLLGLTGT Trigger: TGTCCCCGTGAGACCCAGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAGCAAGACCTCGGACCCTGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS TCA 72 bp | AGGGGGTGCAGCCCCGGGCTCCCGAGCATGAGTTTCTaGATGGCCGGGCAGAGCTGCTTCTCCACCGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RGCSPGLPSMSF*MAGQSCFSTGS Trigger: ACTCCCGGTGGAGAAGCAGCTCTGCCCGGCCATTCAGAAACTCATGCTCGGGAGCCCGGGGCTGCACCCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS GCA 72 bp | GATGCGACTGATGTAGGGGTCGTGGCGCCGCAGGGCTaGCAGGCTGATATCGTGTCCCTTCCCAGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DATDVGVVAPQG*QADIVSLPRQA Trigger: GGCCTGCCTGGGAAGGGACACGATATCAGCCTGGCAGCCCTGCGGCGCCACGACCCCTACATCAGTCGCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CCA 72 bp | AGCTCCTGCGTAGGGAGCACGGTGGGGCTGCTCTCCTaGCTGCCAGAGAGGGACACCGCTTGTGCAGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSCVGSTVGLLS*LPERDTACAGS Trigger: ACTGCCTGCACAAGCGGTGTCCCTCTCTGGCAGCCAGGAGAGCAGCCCCACCGTGCTCCCTACGCAGGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS GCA 72 bp | CCAGAGAGGGACACCGCTTGTGCAGGCAGTGCACCCTaGTCCTTCCTGAGAGCTTGGTGTCCTGGGGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PERDTACAGSAP*SFLRAWCPGAG Trigger: TCCCGCCCCAGGACACCAAGCTCTCAGGAAGGAGCAGGGTGCACTGCCTGCACAAGCGGTGTCCCTCTCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CCA 72 bp | GGCAGAGCTGCTTCTCCACCGGGAGTGAGAGCTTCCTaGGCTCCTCACAGGACAGGGAGCATGCGACCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GRAASPPGVRAS*APHRTGSMRPR Trigger: ACGGGGTCGCATGCTCCCTGTCCTGTGAGGAGCCCAGGAAGCTCTCACTCCCGGTGGAGAAGCAGCTCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS TCA 72 bp | ACACCGCTTGTGCAGGCAGTGCACCCTGCTCCTTCCTaGGAGCTTGGTGTCCTGGGGCGGGAGGTTGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPLVQAVHPAPS*ELGVLGREVEG Trigger: CCCTTCAACCTCCCGCCCCAGGACACCAAGCTCTCAGGAAGGAGCAGGGTGCACTGCCTGCACAAGCGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS GCA 72 bp | GGCCTCTGCAAGTGCTCTGTGTGCAGTGTGCAACCCTaGCATTCCAGGGGGACCCCAGCTGGACAGGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLCKCSVCSVQP*HSRGTPAGQDQ Trigger: CTGGTCCTGTCCAGCTGGGGTCCCCCTGGAATGGCAGGGTTGCACACTGCACACAGAGCACTTGCAGAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS GCA 72 bp | CTGGCTGCCAGAGAGGGACACCGCTTGTGCAGGCAGTaGACCCTGCTCCTTCCTGAGAGCTTGGTGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAAREGHRLCRQ*TLLLPESLVSW Trigger: CCAGGACACCAAGCTCTCAGGAAGGAGCAGGGTGCACTGCCTGCACAAGCGGTGTCCCTCTCTGGCAGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS GCA 72 bp | AGGGGCCTGCTGGCCACGGTGGAGGACTCCCAGTTCTaGAGAAGAGGAGCCTGCTTCTCCATGCTGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RGLLATVEDSQF*RRGACFSMLAV Trigger: GACAGCCAGCATGGAGAAGCAGGCTCCTCTTCTGCAGAACTGGGAGTCCTCCACCGTGGCCAGCAGGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073909.6 |
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| CDS CAA 90 bp | GGACACCGCTTGTGCAGGCAGTGCACCCTGCTCCTTCCTGAGAGCTaGGTGTCCTGGGGCGGGAGGTTGAAGGGGGCCACTGAAATACAC | + |
|
Preference number: 6 (lower is better) Translates to: GHRLCRQCTLLLPES*VSWGGRLKGATEIH Trigger: GTGTATTTCAGTGGCCCCCTTCAACCTCCCGCCCCAGGACACCAAGCTCTCAGGAAGGAGCAGGGTGCACTGCCTGCACAAGCGGTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS GCA 72 bp | TCCTGGTGTACTACCTGGAGCTTCCTTAGCAGCTCCTaGGTAGGGAGCACGGTGGGGCTGCTCTCCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWCTTWSFLSSS*VGSTVGLLSWL Trigger: CAGCCAGGAGAGCAGCCCCACCGTGCTCCCTACGCAGGAGCTGCTAAGGAAGCTCCAGGTAGTACACCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CCA 72 bp | TCCGAGGTCTTGCTGGGCGCAGGTCCTTGCAGCCTCTaGCTGCTGCTGGGTCTCACGGGGACAGGTTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: SEVLLGAGPCSL*LLLGLTGTGLI Trigger: TATCAAACCTGTCCCCGTGAGACCCAGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAGCAAGACCTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CCA 72 bp | AAGATAAGTGCTGAGGCTCAGGGTCCGAGGTCTTGCTaGGCGCAGGTCCTTGCAGCCTCTGGCTGCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KISAEAQGPRSC*AQVLAASGCCW Trigger: CCAGCAGCAGCCAGAGGCTGCAAGGACCTGCGCCCAGCAAGACCTCGGACCCTGAGCCTCAGCACTTATCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CCA 72 bp | CACACTCTGGCCCGGAGCCACCTGAGTGGCCACAGCTaGACCGGTAGGCGCACAGGGGTTATACTTATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HTLARSHLSGHS*TGRRTGVILMH Trigger: GTGCATAAGTATAACCCCTGTGCGCCTACCGGTCCAGCTGTGGCCACTCAGGTGGCTCCGGGCCAGAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CCA 72 bp | ACCCAGGCTTCCAAGGGCTTTTCTGTCCCTGATCCCTaGGCTGACACAGGGAACCTGGCTGCCAAGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TQASKGFSVPDP*ADTGNLAAKAG Trigger: GCCAGCCTTGGCAGCCAGGTTCCCTGTGTCAGCCCAGGGATCAGGGACAGAAAAGCCCTTGGAAGCCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS TCA 72 bp | GGGAGGTTGAAGGGGGCCACTGAAATACACCAGCTGTaGTTGGGCCACACTCTGGCCCGGAGCCACCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GRLKGATEIHQL*LGHTLARSHLS Trigger: ACTCAGGTGGCTCCGGGCCAGAGTGTGGCCCAATCACAGCTGGTGTATTTCAGTGGCCCCCTTCAACCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS TCA 72 bp | CTTGGTGTCCTGGGGCGGGAGGTTGAAGGGGGCCACTaGAATACACCAGCTGTGATTGGGCCACACTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGVLGREVEGGH*NTPAVIGPHSG Trigger: GCCAGAGTGTGGCCCAATCACAGCTGGTGTATTTCAGTGGCCCCCTTCAACCTCCCGCCCCAGGACACCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CCA 72 bp | CTCACAGGACAGGGAGCATGCGACCCCGTGATGAACTaGACGCGTCTCTTGCTGCTGCTGGTGGTGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LTGQGACDPVMN*TRLLLLLVVMV Trigger: CACCATCACCACCAGCAGCAGCAAGAGACGCGTCCAGTTCATCACGGGGTCGCATGCTCCCTGTCCTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CCA 72 bp | CAGTGCACCCTGCTCCTTCCTGAGAGCTTGGTGTCCTaGGGCGGGAGGTTGAAGGGGGCCACTGAAATACAC | + |
|
Preference number: 6 (lower is better) Translates to: QCTLLLPESLVS*GGRLKGATEIH Trigger: GTGTATTTCAGTGGCCCCCTTCAACCTCCCGCCCCAGGACACCAAGCTCTCAGGAAGGAGCAGGGTGCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS TCA 72 bp | AGGAGGCAGCAGGAAGTTCTTGGCCTCCTAGGGCCATaGGCCCATTATCAGTCTCCCTCAGTGGGGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRQQEVLGLLGP*AHYQSPSVGHR Trigger: CCTGTGCCCCACTGAGGGAGACTGATAATGGGCTCATGGCCCTAGGAGGCCAAGAACTTCCTGCTGCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS CAA 90 bp | TCCCAGTTCTGCAGAAGAGGAGCCTGCTTCTCCATGCTGGCTGTCTaGCTGACCCAGGCTTCCAAGGGCTTTTCTGTCCCTGATCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SQFCRRGACFSMLAV*LTQASKGFSVPDPW Trigger: CCAGGGATCAGGGACAGAAAAGCCCTTGGAAGCCTGGGTCAGCAAGACAGCCAGCATGGAGAAGCAGGCTCCTCTTCTGCAGAACTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073909.6 |
||
| CDS CAA 90 bp | CAGGTAGACTGCAGAAGAGGAGCCTGCTTCTCCATGCTGGCTGTCTaGCTGACCCAGGCTTCCAAGGGCTTTTCTGTCCCTGATCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QVDCRRGACFSMLAV*LTQASKGFSVPDPW Trigger: CCAGGGATCAGGGACAGAAAAGCCCTTGGAAGCCTGGGTCAGCAAGACAGCCAGCATGGAGAAGCAGGCTCCTCTTCTGCAGTCTACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112777.9 |
||
| CDS CAA 72 bp | TGCAGAAGAGGAGCCTGCTTCTCCATGCTGGCTGTCTaGCTGACCCAGGCTTCCAAGGGCTTTTCTGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRRGACFSMLAV*LTQASKGFSVP Trigger: AGGGACAGAAAAGCCCTTGGAAGCCTGGGTCAGCAAGACAGCCAGCATGGAGAAGCAGGCTCCTCTTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS GCA 72 bp | GGGCACCTTGAAGCTGCTCTAATAGCTTGTGGCCTCTaGAAGTGCTCTGTGTGCAGTGTGCAACCCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GHLEAALIACGL*KCSVCSVQPCH Trigger: ATGGCAGGGTTGCACACTGCACACAGAGCACTTGCAGAGGCCACAAGCTATTAGAGCAGCTTCAAGGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CCA 72 bp | TTGGCCTTGGTGAGCATCTGCAGGATATCTACTTCTTaGCCCTCTCCTGAGCTCAAGGTCACGGGGGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LALVSICRISTS*PSPELKVTGED Trigger: ATCCTCCCCCGTGACCTTGAGCTCAGGAGAGGGCCAAGAAGTAGATATCCTGCAGATGCTCACCAAGGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CAA 90 bp | GGTCCTTGCAGCCTCTGGCTGCTGCTGGGTCTCACGGGGACAGGTTaGATAAGTTTAGGGTTGTCACAGATGGCAGAGGAATTGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: GPCSLWLLLGLTGTG*ISLGLSQMAEELVI Trigger: GATGACCAATTCCTCTGCCATCTGTGACAACCCTAAACTTATCAAACCTGTCCCCGTGAGACCCAGCAGCAGCCAGAGGCTGCAAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CAA 72 bp | AGCCTCTGGCTGCTGCTGGGTCTCACGGGGACAGGTTaGATAAGTTTAGGGTTGTCACAGATGGCAGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLWLLLGLTGTG*ISLGLSQMAEE Trigger: TTCCTCTGCCATCTGTGACAACCCTAAACTTATCAAACCTGTCCCCGTGAGACCCAGCAGCAGCCAGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CAA 90 bp | TTTGGCTCGGAACAGGTCTTACACTTGGTGTACTCATCCTTGGCCTaGGTGAGCATCTGCAGGATATCTACTTCTTGGCCCTCTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FGSEQVLHLVYSSLA*VSICRISTSWPSPE Trigger: CTCAGGAGAGGGCCAAGAAGTAGATATCCTGCAGATGCTCACCAAGGCCAAGGATGAGTACACCAAGTGTAAGACCTGTTCCGAGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
||
| CDS CAA 72 bp | GAACAGGTCTTACACTTGGTGTACTCATCCTTGGCCTaGGTGAGCATCTGCAGGATATCTACTTCTTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: EQVLHLVYSSLA*VSICRISTSWP Trigger: GGGCCAAGAAGTAGATATCCTGCAGATGCTCACCAAGGCCAAGGATGAGTACACCAAGTGTAAGACCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CAA 72 bp | GGCTCGGAACAGGTCTTACACTTGGTGTACTCATCCTaGGCCTTGGTGAGCATCTGCAGGATATCTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSEQVLHLVYSS*ALVSICRISTS Trigger: AGAAGTAGATATCCTGCAGATGCTCACCAAGGCCAAGGATGAGTACACCAAGTGTAAGACCTGTTCCGAGCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CAA 90 bp | ATCTGTTTTGGCTCGGAACAGGTCTTACACTTGGTGTACTCATCCTaGGCCTTGGTGAGCATCTGCAGGATATCTACTTCTTGGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ICFGSEQVLHLVYSS*ALVSICRISTSWPS Trigger: AGAGGGCCAAGAAGTAGATATCCTGCAGATGCTCACCAAGGCCAAGGATGAGTACACCAAGTGTAAGACCTGTTCCGAGCCAAAACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CAA 90 bp | GCAGAGGAATTGGTCATCTGTTTTGGCTCGGAACAGGTCTTACACTaGGTGTACTCATCCTTGGCCTTGGTGAGCATCTGCAGGATATCT | + |
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Preference number: 6 (lower is better) Translates to: AEELVICFGSEQVLH*VYSSLALVSICRIS Trigger: AGATATCCTGCAGATGCTCACCAAGGCCAAGGATGAGTACACCAAGTGTAAGACCTGTTCCGAGCCAAAACAGATGACCAATTCCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CCA 72 bp | CATGCTGAGCCTATTCATAATGGTGAATCCGTGCTTTaGGGAGGCAGACCTCGTATAAACAAACAAGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: HAEPIHNGESVL*GGRPRINKQGS Trigger: GGAACCTTGTTTGTTTATACGAGGTCTGCCTCCCCAAAGCACGGATTCACCATTATGAATAGGCTCAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CCA 72 bp | GTTGTCACAGATGGCAGAGGAATTGGTCATCTGTTTTaGCTCGGAACAGGTCTTACACTTGGTGTACTCATC | + |
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Preference number: 6 (lower is better) Translates to: VVTDGRGIGHLF*LGTGLTLGVLI Trigger: GATGAGTACACCAAGTGTAAGACCTGTTCCGAGCCAAAACAGATGACCAATTCCTCTGCCATCTGTGACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CAA 72 bp | GGTTGTCACAGATGGCAGAGGAATTGGTCATCTGTTTaGGCTCGGAACAGGTCTTACACTTGGTGTACTCAT | + |
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Preference number: 6 (lower is better) Translates to: GCHRWQRNWSSV*ARNRSYTWCTH Trigger: ATGAGTACACCAAGTGTAAGACCTGTTCCGAGCCAAAACAGATGACCAATTCCTCTGCCATCTGTGACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS TCA 72 bp | CGGCTCCATGACAGGCTTTCAACTGTTCGCTCTGAGTaGGGTTTTTCATTAGTTTTGCAATTCTCTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: RLHDRLSTVRSE*GFSLVLQFSGT Trigger: AGTGCCAGAGAATTGCAAAACTAATGAAAAACCTCACTCAGAGCGAACAGTTGAAAGCCTGTCATGGAGCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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| CDS CAA 72 bp | TTGATAAGTTTAGGGTTGTCACAGATGGCAGAGGAATaGGTCATCTGTTTTGGCTCGGAACAGGTCTTACAC | + |
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Preference number: 6 (lower is better) Translates to: LISLGLSQMAEE*VICFGSEQVLH Trigger: GTGTAAGACCTGTTCCGAGCCAAAACAGATGACCAATTCCTCTGCCATCTGTGACAACCCTAAACTTATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073909.6 ENSMUST00000112777.9 |
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