Pregenerated sensors for DCP1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021962Ensembl transcript IDs: ENSMUST00000022535.9, ENSMUST00000223658.2, ENSMUST00000225196.2, ENSMUST00000225286.2
Found 325 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGTGTGCCACGAGGACACAGGACGACGCAGGCTGTGACCCCTCAGTaGCTGACTCGCAGGGTCCTCCTGTGCCCGTGCCCTTCCTTCTCT | + |
Preference number: 1 (lower is better) Translates to: GVPRGHRTTQAVTPQ*LTRRVLLCPCPSFS Trigger: AGAGAAGGAAGGGCACGGGCACAGGAGGACCCTGCGAGTCAGGCACTGAGGGGTCACAGCCTGCGTCGTCCTGTGTCCTCGTGGCACACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CCA 90 bp | GCTCCACTGAGCTCTGCTGCAAGGCTGGTGGCTCCTCCCGAGGCCTaGAAAGCAAGCCGGCAGTCAGGCTCCTCATTCCACCCACTGGCT | + |
Preference number: 1 (lower is better) Translates to: APLSSAARLVAPPEA*KASRQSGSSFHPLA Trigger: AGCCAGTGGGTGGAATGAGGAGCCTGACTGCCGGCTTGCTTTCCAGGCCTCGGGAGGAGCCACCAGCCTTGCAGCAGAGCTCAGTGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CCA 90 bp | GTGCCAGCTGGGTTTGCTAGGCTCACCGGGGCTCTGAAGGGGCTCTaGCTAGCAACCAGACTGCTGTGGCTTAGCTCAGGGACTGGCTGG | + |
Preference number: 1 (lower is better) Translates to: VPAGFARLTGALKGL*LATRLLWLSSGTGW Trigger: CCAGCCAGTCCCTGAGCTAAGCCACAGCAGTCTGGTTGCTAGCCAGAGCCCCTTCAGAGCCCCGGTGAGCCTAGCAAACCCAGCTGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR TCA 90 bp | GGTAGGATCTGGATCTGTGTGGCCCCGGCCTCTGCTTCAAGGGTGTaGAGCCTCCTCCATCAGAGCCCAGCCGGCCTATCCCAAGAGCTG | + |
Preference number: 1 (lower is better) Translates to: GRIWICVAPASASRV*SLLHQSPAGLSQEL Trigger: CAGCTCTTGGGATAGGCCGGCTGGGCTCTGATGGAGGAGGCTTCACACCCTTGAAGCAGAGGCCGGGGCCACACAGATCCAGATCCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | CCCACAGGCTCCTGGAGGCCCTGGTCCTCATGGAAACTCTCCTCGTaGGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGG | + |
Preference number: 1 (lower is better) Translates to: PTGSWRPWSSWKLSS*VAFKAHCKVLCSDR Trigger: CCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGGGCCTCCAGGAGCCTGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CCA 90 bp | GGCAACAGCGCTGACTCTCAGGCCAGACTCATCCAACCGCACCTATaGTCAGGCTTGGCCCAGCTATCTGGGGACTCATTCTGGCCTAGC | + |
Preference number: 1 (lower is better) Translates to: GNSADSQARLIQPHL*SGLAQLSGDSFWPS Trigger: GCTAGGCCAGAATGAGTCCCCAGATAGCTGGGCCAAGCCTGACCATAGGTGCGGTTGGATGAGTCTGGCCTGAGAGTCAGCGCTGTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 90 bp | CAGGCTCCTGGAGGCCCTGGTCCTCATGGAAACTCTCCTCGTGAGTaGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCA | + |
Preference number: 1 (lower is better) Translates to: QAPGGPGPHGNSPRE*PSKPTVRCSAQTGA Trigger: TGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGGGCCTCCAGGAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CCA 90 bp | TGGCAGAGTGGGGCTGAGGACAGGGCTCAGTGGGAGTGTGTAGCTTaGGGGATGTTTGTCACCCGACTGTGCAATGGAGGCGGGAGTGAT | + |
Preference number: 1 (lower is better) Translates to: WQSGAEDRAQWECVA*GMFVTRLCNGGGSD Trigger: ATCACTCCCGCCTCCATTGCACAGTCGGGTGACAAACATCCCCCAAGCTACACACTCCCACTGAGCCCTGTCCTCAGCCCCACTCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR GCA 90 bp | CAGAGCCCAGCCGGCCTATCCCAAGAGCTGTGCTTCACCGGAGTTTaGACAGGGCAGGACCAGGGACACTTACCGGAACACAAAGACATC | + |
Preference number: 1 (lower is better) Translates to: QSPAGLSQELCFTGV*TGQDQGHLPEHKDI Trigger: GATGTCTTTGTGTTCCGGTAAGTGTCCCTGGTCCTGCCCTGTGCAAACTCCGGTGAAGCACAGCTCTTGGGATAGGCCGGCTGGGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | AGACCACACTTGGGGGTGATCAAGCCGACAGGCACGTTCACTTTATaGGAACAGCCCTGTGGCTCCCTGACCACCACCTCCTACTGTCAG | + |
Preference number: 1 (lower is better) Translates to: RPHLGVIKPTGTFTL*EQPCGSLTTTSYCQ Trigger: CTGACAGTAGGAGGTGGTGGTCAGGGAGCCACAGGGCTGTTCTCATAAAGTGAACGTGCCTGTCGGCTTGATCACCCCCAAGTGTGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | AGGTATCTAAGCCAAGCCTGGGCTAAGGCCTTGACGGGTTTGGAATaGACATCACTGTCCAGGGCTAGCTGTGGACAGTCCGGACGGAGC | + |
Preference number: 1 (lower is better) Translates to: RYLSQAWAKALTGLE*TSLSRASCGQSGRS Trigger: GCTCCGTCCGGACTGTCCACAGCTAGCCCTGGACAGTGATGTTCATTCCAAACCCGTCAAGGCCTTAGCCCAGGCTTGGCTTAGATACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 90 bp | CTGCATGACAAACTCTGGGCTGCTCTTCCCAGACCCTTTGACCACTaGGGTGAGGGGGTGGGGTGTGTATACAGATGGACCAAATGGCCT | + |
Preference number: 1 (lower is better) Translates to: LHDKLWAALPRPFDH*GEGVGCVYRWTKWP Trigger: AGGCCATTTGGTCCATCTGTATACACACCCCACCCCCTCACCCCAGTGGTCAAAGGGTCTGGGAAGAGCAGCCCAGAGTTTGTCATGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 90 bp | GAGGGGCTCCCCCTGACTGCTCAAAGGGAAATGGGAGGAATGAGCTaGGCTCTTTCTGTGATGCATCTCCCAGCAGCTTGTCTGTGTCCT | + |
Preference number: 1 (lower is better) Translates to: EGLPLTAQREMGGMS*ALSVMHLPAACLCP Trigger: AGGACACAGACAAGCTGCTGGGAGATGCATCACAGAAAGAGCCCAGCTCATTCCTCCCATTTCCCTTTGAGCAGTCAGGGGGAGCCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR CCA 90 bp | CTCTGGCTAGCAACCAGACTGCTGTGGCTTAGCTCAGGGACTGGCTaGTTCAGGAGTGGAGATTTCTGCCTGGGTGTGGTCTTTACTGCT | + |
Preference number: 1 (lower is better) Translates to: LWLATRLLWLSSGTG*FRSGDFCLGVVFTA Trigger: AGCAGTAAAGACCACACCCAGGCAGAAATCTCCACTCCTGAACCAGCCAGTCCCTGAGCTAAGCCACAGCAGTCTGGTTGCTAGCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR CCA 90 bp | AGGCCTGGAAAGCAAGCCGGCAGTCAGGCTCCTCATTCCACCCACTaGCTTGTAGCTGATGAAAACACCCACGTCACTCAACACAATGGT | + |
Preference number: 1 (lower is better) Translates to: RPGKQAGSQAPHSTH*LVADENTHVTQHNG Trigger: ACCATTGTGTTGAGTGACGTGGGTGTTTTCATCAGCTACAAGCCAGTGGGTGGAATGAGGAGCCTGACTGCCGGCTTGCTTTCCAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CCA 90 bp | CCGCACCTATGGTCAGGCTTGGCCCAGCTATCTGGGGACTCATTCTaGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTG | + |
Preference number: 1 (lower is better) Translates to: PHLWSGLAQLSGDSF*PSFLEVMIWNFWLL Trigger: CAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCAGAATGAGTCCCCAGATAGCTGGGCCAAGCCTGACCATAGGTGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | AGCCGACAGGCACGTTCACTTTATGAGAACAGCCCTGTGGCTCCCTaGCCACCACCTCCTACTGTCAGCAACATTCATCACCTCACTATG | + |
Preference number: 1 (lower is better) Translates to: SRQARSLYENSPVAP*PPPPTVSNIHHLTM Trigger: CATAGTGAGGTGATGAATGTTGCTGACAGTAGGAGGTGGTGGTCAGGGAGCCACAGGGCTGTTCTCATAAAGTGAACGTGCCTGTCGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | GCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTaGACAGGGCGGGCAATGCTGGTACTGAAGAACAACAAAGTCAGG | + |
Preference number: 1 (lower is better) Translates to: AHCKVLCSDRSILDS*TGRAMLVLKNNKVR Trigger: CCTGACTTTGTTGTTCTTCAGTACCAGCATTGCCCGCCCTGTTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CCA 90 bp | GGTGTGGTCTTTACTGCTTGTATCATGGTGCTATTCCGAGGTAAGTaGGGAACTTGTGTGGTAGGAGCTTCAGCTGGCAGAGTGGGGCTG | + |
Preference number: 1 (lower is better) Translates to: GVVFTACIMVLFRGK*GTCVVGASAGRVGL Trigger: CAGCCCCACTCTGCCAGCTGAAGCTCCTACCACACAAGTTCCCCACTTACCTCGGAATAGCACCATGATACAAGCAGTAAAGACCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR CCA 90 bp | GCTCAGGGACTGGCTGGTTCAGGAGTGGAGATTTCTGCCTGGGTGTaGTCTTTACTGCTTGTATCATGGTGCTATTCCGAGGTAAGTGGG | + |
Preference number: 1 (lower is better) Translates to: AQGLAGSGVEISAWV*SLLLVSWCYSEVSG Trigger: CCCACTTACCTCGGAATAGCACCATGATACAAGCAGTAAAGACCACACCCAGGCAGAAATCTCCACTCCTGAACCAGCCAGTCCCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR TCA 90 bp | AACATGCAAGCTAGGCTAGCTAGCAGCGGGTCTGGACAATATGCCTaGATGAGGAATAAGGCAACAGCGCTGACTCTCAGGCCAGACTCA | + |
Preference number: 1 (lower is better) Translates to: NMQARLASSGSGQYA*MRNKATALTLRPDS Trigger: TGAGTCTGGCCTGAGAGTCAGCGCTGTTGCCTTATTCCTCATTCAGGCATATTGTCCAGACCCGCTGCTAGCTAGCCTAGCTTGCATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | ACCGGAGCATTCTGGATTCTTGAACAGGGCGGGCAATGCTGGTACTaGAGAACAACAAAGTCAGGCAGGAAGAGACACATGGTCCTCAGT | + |
Preference number: 1 (lower is better) Translates to: TGAFWILEQGGQCWY*RTTKSGRKRHMVLS Trigger: ACTGAGGACCATGTGTCTCTTCCTGCCTGACTTTGTTGTTCTTCAGTACCAGCATTGCCCGCCCTGTTCAAGAATCCAGAATGCTCCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR GCA 90 bp | ATTGAGTTCCCATTAAAGCTTAAGCAACTGTCCCGGCGGGACCGCTaGGTCTGTCAGCATTATTCACAGCGAATCCTTACGCTAGCTGGT | + |
Preference number: 1 (lower is better) Translates to: IEFPLKLKQLSRRDR*VCQHYSQRILTLAG Trigger: ACCAGCTAGCGTAAGGATTCGCTGTGAATAATGCTGACAGACGCAGCGGTCCCGCCGGGACAGTTGCTTAAGCTTTAATGGGAACTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | CTTCAAGTCTCCATCCCTTCGGCACCCAGAAGTTTGTATCTACACTaGGGAAGCCTTCCTTCTCGGAGGTTCTCCTGCTTATCACAGTCA | + |
Preference number: 1 (lower is better) Translates to: LQVSIPSAPRSLYLH*GSLPSRRFSCLSQS Trigger: TGACTGTGATAAGCAGGAGAACCTCCGAGAAGGAAGGCTTCCTCAGTGTAGATACAAACTTCTGGGTGCCGAAGGGATGGAGACTTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | GTGCTTGGCTGTAGCCCAGGACTGGAGATATTTGAGCCGCCCATCTaGTTCTCTGGTCCTCATGCTTGTACAGCAAGCTCTTTTATAAAC | + |
Preference number: 1 (lower is better) Translates to: VLGCSPGLEIFEPPI*FSGPHACTASSFIN Trigger: GTTTATAAAAGAGCTTGCTGTACAAGCATGAGGACCAGAGAATCAGATGGGCGGCTCAAATATCTCCAGTCCTGGGCTACAGCCAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR CCA 90 bp | CCGCTGCGTCTGTCAGCATTATTCACAGCGAATCCTTACGCTAGCTaGTTGAGCCAACTGGGTTCTTACCCATCATTAAATAGTGCTCAG | + |
Preference number: 1 (lower is better) Translates to: PLRLSALFTANPYAS*LSQLGSYPSLNSAQ Trigger: CTGAGCACTATTTAATGATGGGTAAGAACCCAGTTGGCTCAACCAGCTAGCGTAAGGATTCGCTGTGAATAATGCTGACAGACGCAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | CTTCTCTTCCCTCTGAGTTGCAGTATGATGGCCGACTCCGCTGTATaGGCAGGTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTA | + |
Preference number: 1 (lower is better) Translates to: LLFPLSCSMMADSAV*AGRHLEFHVALSVL Trigger: TAACACTGATAATGCAACATGAAACTCAAGGTGCCTACCTGCTCATACAGCGGAGTCGGCCATCATACTGCAACTCAGAGGGAAGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR TCA 90 bp | TTTGGCAAGGAGGTTCCAAATAACTCTTCTACTGTCAGATGTTTATaGCCAGACGGAGCAGACTTATCCTGTGACCCAGAGGGTGTCTCT | + |
Preference number: 1 (lower is better) Translates to: FGKEVPNNSSTVRCL*PDGADLSCDPEGVS Trigger: AGAGACACCCTCTGGGTCACAGGATAAGTCTGCTCCGTCTGGTCATAAACATCTGACAGTAGAAGAGTTATTTGGAACCTCCTTGCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR CCA 90 bp | GCTCCCTTTCTGCATAGCTTTAAACTGCTCAGCACATTTGAGGAATaGAACCAGAATGGCTTTGTCAGAATGGTCCACTGGTCCTTTTGC | + |
Preference number: 1 (lower is better) Translates to: APFLHSFKLLSTFEE*NQNGFVRMVHWSFC Trigger: GCAAAAGGACCAGTGGACCATTCTGACAAAGCCATTCTGGTTCCATTCCTCAAATGTGCTGAGCAGTTTAAAGCTATGCAGAAAGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 90 bp | GCAGGTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATaGCAGTTACGGCCTCTACTACGGAACACAAAGACATCCCAGAAG | + |
Preference number: 1 (lower is better) Translates to: AGRHLEFHVALSVLQ*QLRPLLRNTKTSQK Trigger: CTTCTGGGATGTCTTTGTGTTCCGTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTACCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225196.2 |
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3UTR TCA 90 bp | CAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTaGTGCTGCACAGTGAAACCTCCATCATCACTGAGAACGTCTCTA | + |
Preference number: 1 (lower is better) Translates to: QHNGLLLFCQTKVCW*CCTVKPPSSLRTSL Trigger: TAGAGACGTTCTCAGTGATGATGGAGGTTTCACTGTGCAGCATCACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR TCA 90 bp | CACTCTTCACCCTCACATAACACTACACACACTCAAAAGCATCAGTaGGATTCATACCTATGGAGAAGACGCTTTCAATCATCTGTTTAC | + |
Preference number: 1 (lower is better) Translates to: HSSPSHNTTHTQKHQ*DSYLWRRRFQSSVY Trigger: GTAAACAGATGATTGAAAGCGTCTTCTCCATAGGTATGAATCTCACTGATGCTTTTGAGTGTGTGTAGTGTTATGTGAGGGTGAAGAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 90 bp | ATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTACTaGAATGAGAAAATTTCAAACGACATTCTTTGGGGGAAGAGAGCA | + |
Preference number: 1 (lower is better) Translates to: MLHYQCYNGSYGLYY*NEKISNDILWGKRA Trigger: TGCTCTCTTCCCCCAAAGAATGTCGTTTGAAATTTTCTCATTTCAGTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR-3UTR TCA 90 bp | ACAACGCTGCATGACAAACTCTGGGCTGCTCTTCCCAGACCCTTTGACCACTGGGGGCGTGGGCTCCACTaGGCTCTGCTGCAAGGCTGG | + |
Preference number: 2 (lower is better) Translates to: TTLHDKLWAALPRPFDHWGRGLH*ALLQGW Trigger: CCAGCCTTGCAGCAGAGCTCAGTGGAGCCCACGCCC...CCAGTGGTCAAAGGGTCTGGGAAGAGCAGCCCAGAGTTTGTCATGCAGCGTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR-3UTR TCA 90 bp | CCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACAGGGCGGGCGTGGGCTCCACTaGGCTCTGCTGCAAGGCTGG | + |
Preference number: 2 (lower is better) Translates to: PTVRCSAQTGAFWILEQGGRGLH*ALLQGW Trigger: CCAGCCTTGCAGCAGAGCTCAGTGGAGCCCACGCCC...GCCCTGTTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CAA 90 bp | TCAGAGCCCAGCCGGCCTATCCCAAGAGCTGTGCTTCACCGGAGTTaGCACAGGGCAGGACCAGGGACACTTACCGGAACACAAAGACAT | + |
Preference number: 2 (lower is better) Translates to: SEPSRPIPRAVLHRS*HRAGPGTLTGTQRH Trigger: ATGTCTTTGTGTTCCGGTAAGTGTCCCTGGTCCTGCCCTGTGCAAACTCCGGTGAAGCACAGCTCTTGGGATAGGCCGGCTGGGCTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR-3UTR GCA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTCCACTGAGCTCTGCTaGAAGGCTGGTGGCTCCTCC | + |
Preference number: 2 (lower is better) Translates to: PGPHGNSPREWPSKPTVRSTELC*KAGGSS Trigger: GGAGGAGCCACCAGCCTTGCAGCAGAGCTCAGTGGA...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR GCA 90 bp | CCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGGCTCCACTGAGCTCTaGTGCAAGGCTGGTGGCTCC | + |
Preference number: 2 (lower is better) Translates to: PHGNSPREWPSKPTVRCSGSTEL*CKAGGS Trigger: GGAGCCACCAGCCTTGCAGCAGAGCTCAGTGGAGCC...AGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR GCA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGTGGCCCCGGCCTCTaGTTCAAGGGTGTGAAGCCT | + |
Preference number: 2 (lower is better) Translates to: PGPHGNSPREWPSKPTVRCGPGL*FKGVKP Trigger: AGGCTTCACACCCTTGAAGCAGAGGCCGGGGCCACA...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CAA 90 bp | GCTGACTCTCAGGCCAGACTCATCCAACCGCACCTATGGTCAGGCTaGGCCCAGCTATCTGGGGACTCATTCTGGCCTAGCTTCCTAGAA | + |
Preference number: 2 (lower is better) Translates to: ADSQARLIQPHLWSG*AQLSGDSFWPSFLE Trigger: TTCTAGGAAGCTAGGCCAGAATGAGTCCCCAGATAGCTGGGCCAAGCCTGACCATAGGTGCGGTTGGATGAGTCTGGCCTGAGAGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR-3UTR CCA 90 bp | TCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACTGCTGCAAGGCTGGTaGCTCCTCCCGAGGCCTGGA | + |
Preference number: 2 (lower is better) Translates to: SKPTVRCSAQTGAFWILELLQGW*LLPRPG Trigger: TCCAGGCCTCGGGAGGAGCCACCAGCCTTGCAGCAG...TTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR CCA 90 bp | GATCAGCACTGGGGTGCTGACTTCAGGCTGAACTGTGTGGTGAGCGGCAGAATGGCTGTAGCCCAGGACTaGAGATATTTGAGCCGCCCA | + |
Preference number: 2 (lower is better) Translates to: DQHWGADFRLNCVVSGRMAVAQD*RYLSRP Trigger: TGGGCGGCTCAAATATCTCCAGTCCTGGGCTACAGC...CATTCTGCCGCTCACCACACAGTTCAGCCTGAAGTCAGCACCCCAGTGCTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR-3UTR CCA 90 bp | CGACTGTGCAATGGAGGCGGGAGTGATCAGCACTGGGGTGCTGACTTCAGGCTGATGGGAGGAATGAGCTaGGCTCTTTCTGTGATGCAT | + |
Preference number: 2 (lower is better) Translates to: RLCNGGGSDQHWGADFRLMGGMS*ALSVMH Trigger: ATGCATCACAGAAAGAGCCCAGCTCATTCCTCCCAT...CAGCCTGAAGTCAGCACCCCAGTGCTGATCACTCCCGCCTCCATTGCACAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR CAA 90 bp | GGGAGGAATGAGCTGGGCTCTTTCTGTGATGCATCTCCCAGCAGCTaGTCTGTGTCCTCTGACTCTAGACCCATAGCTGTTGGTTGTTCC | + |
Preference number: 2 (lower is better) Translates to: GRNELGSFCDASPSS*SVSSDSRPIAVGCS Trigger: GGAACAACCAACAGCTATGGGTCTAGAGTCAGAGGACACAGACAAGCTGCTGGGAGATGCATCACAGAAAGAGCCCAGCTCATTCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR-3UTR TCA 90 bp | AGTGGAGATTTCTGCCTGGGTGTGGTCTTTACTGCTTGTATCATGGTGCTATTCCTGAGGGGCTCCCCCTaGCTGCTCAAAGGGAAATGG | + |
Preference number: 2 (lower is better) Translates to: SGDFCLGVVFTACIMVLFLRGSP*LLKGKW Trigger: CCATTTCCCTTTGAGCAGTCAGGGGGAGCCCCTCAG...GAATAGCACCATGATACAAGCAGTAAAGACCACACCCAGGCAGAAATCTCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR-3UTR CCA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCAGAGGAGGGAGGGCGTaGGCTCCACTGAGCTCTGCT | + |
Preference number: 2 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGRGGRA*APLSSA Trigger: AGCAGAGCTCAGTGGAGCCCACGCCCTCCCTCCTCT...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CAA 90 bp | TGGCCGACTCCGCTGTATGAGCAGGTAGGCACCTTGAGTTTCATGTaGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTACGGA | + |
Preference number: 2 (lower is better) Translates to: WPTPLYEQVGTLSFM*HYQCYNGSYGLYYG Trigger: TCCGTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTACCTGCTCATACAGCGGAGTCGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225196.2 |
||
3UTR-3UTR GCA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCTGCTTCACCGGAGTTTaGACAGGGCAGGACCAGGGA | + |
Preference number: 2 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGCFTGV*TGQDQG Trigger: TCCCTGGTCCTGCCCTGTGCAAACTCCGGTGAAGCA...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR-3UTR CCA 90 bp | ACGTACAGCAACAACACGTGTCTTAAAGATTCACAGATAAAAGGGAAACACAACCTGCTGCAAGGCTGGTaGCTCCTCCCGAGGCCTGGA | + |
Preference number: 2 (lower is better) Translates to: TYSNNTCLKDSQIKGKHNLLQGW*LLPRPG Trigger: TCCAGGCCTCGGGAGGAGCCACCAGCCTTGCAGCAG...GTTGTGTTTCCCTTTTATCTGTGAATCTTTAAGACACGTGTTGTTGCTGTACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
||
3UTR-3UTR TCA 90 bp | GGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTGCTTAGCTGTTCCATaGGGAAGCCTGCGTGTCTTG | + |
Preference number: 2 (lower is better) Translates to: GTLSFMLHYQCYNGSYGLCLAVP*GSLRVL Trigger: CAAGACACGCAGGCTTCCTCATGGAACAGCTAAGCA...GAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR TCA 90 bp | CTGTCAGCATTATTCACAGCGAATCCTTACGCTAGCTGGTTGAGCCAACTGGGTACAAAGGTTTGCTGGTaGTGCTGCACAGTGAAACCT | + |
Preference number: 2 (lower is better) Translates to: LSALFTANPYASWLSQLGTKVCW*CCTVKP Trigger: AGGTTTCACTGTGCAGCATCACCAGCAAACCTTTGT...ACCCAGTTGGCTCAACCAGCTAGCGTAAGGATTCGCTGTGAATAATGCTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR-3UTR TCA 90 bp | TCATTCTGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATGGCACGTTCACTTTATaGGAACAGCCCTGTGGCTCC | + |
Preference number: 2 (lower is better) Translates to: SFWPSFLEVMIWNFWLLNGTFTL*EQPCGS Trigger: GGAGCCACAGGGCTGTTCTCATAAAGTGAACGTGCC...ATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCAGAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR-3UTR TCA 90 bp | AGTGGAGATTTCTGCCTGGGTGTGGTCTTTACTGCTTGTATCATGGTGCTATTCAGGACTGGAGATATTTaGGCCGCCCATCTGATTCTC | + |
Preference number: 2 (lower is better) Translates to: SGDFCLGVVFTACIMVLFRTGDI*AAHLIL Trigger: GAGAATCAGATGGGCGGCTCAAATATCTCCAGTCCT...GAATAGCACCATGATACAAGCAGTAAAGACCACACCCAGGCAGAAATCTCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR-3UTR CCA 90 bp | CCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTCTAGAAGTCATGATCTaGAACTTCTGGCTTCTGAAT | + |
Preference number: 2 (lower is better) Translates to: PHGNSPREWPSKPTVRCSLEVMI*NFWLLN Trigger: ATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAG...AGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CAA 90 bp | CTGCGTCTGTCAGCATTATTCACAGCGAATCCTTACGCTAGCTGGTaGAGCCAACTGGGTTCTTACCCATCATTAAATAGTGCTCAGAAA | + |
Preference number: 2 (lower is better) Translates to: LRLSALFTANPYASW*SQLGSYPSLNSAQK Trigger: TTTCTGAGCACTATTTAATGATGGGTAAGAACCCAGTTGGCTCAACCAGCTAGCGTAAGGATTCGCTGTGAATAATGCTGACAGACGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR-3UTR GCA 90 bp | AAACAGGTTTACCCACTTCAAGTCTCCATCCCTTCGGCACCCAGAAGTTTGTATGTCCACTGGTCCTTTTaGCAAAGTGTTAAGGAAAAC | + |
Preference number: 2 (lower is better) Translates to: KQVYPLQVSIPSAPRSLYVHWSF*QSVKEN Trigger: GTTTTCCTTAACACTTTGGCAAAAGGACCAGTGGAC...ATACAAACTTCTGGGTGCCGAAGGGATGGAGACTTGAAGTGGGTAAACCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR-3UTR CCA 90 bp | TGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATTTTAAGAGCACATTTGAGGAATaGAACCAGAATGGCTTTGTC | + |
Preference number: 2 (lower is better) Translates to: WPSFLEVMIWNFWLLNFKSTFEE*NQNGFV Trigger: GACAAAGCCATTCTGGTTCCATTCCTCAAATGTGCT...CTTAAAATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR-3UTR GCA 90 bp | CTTCAAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTGAAGTCAAATCGGTGCATAGCTTTAAACTaGTCAGCACATTTGAGGAAT | + |
Preference number: 2 (lower is better) Translates to: LQSDLYCIAAFERVKSNRCIALN*SAHLRN Trigger: ATTCCTCAAATGTGCTGAGCAGTTTAAAGCTATGCA...CCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR TCA 72 bp | CTTCTAGGAGTAGAGGAGGGAGGGCGTGGGCTCCACTaGGCTCTGCTGCAAGGCTGGTGGCTCCTCCCGAGG | + |
Preference number: 3 (lower is better) Translates to: LLGVEEGGRGLH*ALLQGWWLLPR Trigger: CCTCGGGAGGAGCCACCAGCCTTGCAGCAGAGCTCAGTGGAGCCCACGCCCTCCCTCCTCTACTCCTAGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR TCA 72 bp | TGGATCTGTGTGGCCCCGGCCTCTGCTTCAAGGGTGTaGAGCCTCCTCCATCAGAGCCCAGCCGGCCTATCC | + |
Preference number: 3 (lower is better) Translates to: WICVAPASASRV*SLLHQSPAGLS Trigger: GGATAGGCCGGCTGGGCTCTGATGGAGGAGGCTTCACACCCTTGAAGCAGAGGCCGGGGCCACACAGATCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR CCA 72 bp | AGCTCTGCTGCAAGGCTGGTGGCTCCTCCCGAGGCCTaGAAAGCAAGCCGGCAGTCAGGCTCCTCATTCCAC | + |
Preference number: 3 (lower is better) Translates to: SSAARLVAPPEA*KASRQSGSSFH Trigger: GTGGAATGAGGAGCCTGACTGCCGGCTTGCTTTCCAGGCCTCGGGAGGAGCCACCAGCCTTGCAGCAGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
||
3UTR GCA 72 bp | CTCCATCAGAGCCCAGCCGGCCTATCCCAAGAGCTGTaGTTCACCGGAGTTTGCACAGGGCAGGACCAGGGA | + |
Preference number: 3 (lower is better) Translates to: LHQSPAGLSQEL*FTGVCTGQDQG Trigger: TCCCTGGTCCTGCCCTGTGCAAACTCCGGTGAAGCACAGCTCTTGGGATAGGCCGGCTGGGCTCTGATGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 72 bp | GGGTTTGCTAGGCTCACCGGGGCTCTGAAGGGGCTCTaGCTAGCAACCAGACTGCTGTGGCTTAGCTCAGGG | + |
Preference number: 3 (lower is better) Translates to: GFARLTGALKGL*LATRLLWLSSG Trigger: CCCTGAGCTAAGCCACAGCAGTCTGGTTGCTAGCCAGAGCCCCTTCAGAGCCCCGGTGAGCCTAGCAAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR GCA 72 bp | GCCGGCCTATCCCAAGAGCTGTGCTTCACCGGAGTTTaGACAGGGCAGGACCAGGGACACTTACCGGAACAC | + |
Preference number: 3 (lower is better) Translates to: AGLSQELCFTGV*TGQDQGHLPEH Trigger: GTGTTCCGGTAAGTGTCCCTGGTCCTGCCCTGTGCAAACTCCGGTGAAGCACAGCTCTTGGGATAGGCCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR CCA 72 bp | GGGGCTGAGGACAGGGCTCAGTGGGAGTGTGTAGCTTaGGGGATGTTTGTCACCCGACTGTGCAATGGAGGC | + |
Preference number: 3 (lower is better) Translates to: GAEDRAQWECVA*GMFVTRLCNGG Trigger: GCCTCCATTGCACAGTCGGGTGACAAACATCCCCCAAGCTACACACTCCCACTGAGCCCTGTCCTCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR CCA 72 bp | GCTCTGAAGGGGCTCTGGCTAGCAACCAGACTGCTGTaGCTTAGCTCAGGGACTGGCTGGTTCAGGAGTGGA | + |
Preference number: 3 (lower is better) Translates to: ALKGLWLATRLL*LSSGTGWFRSG Trigger: TCCACTCCTGAACCAGCCAGTCCCTGAGCTAAGCCACAGCAGTCTGGTTGCTAGCCAGAGCCCCTTCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR-3UTR CAA 90 bp | CCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTCTCTTCCCAGACCCTTaGACCACTGGGGTGAGGGGG | + |
Preference number: 3 (lower is better) Translates to: PHGNSPREWPSKPTVRCSLFPDP*TTGVRG Trigger: CCCCCTCACCCCAGTGGTCAAAGGGTCTGGGAAGAG...AGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 72 bp | TTGGGGGTGATCAAGCCGACAGGCACGTTCACTTTATaGGAACAGCCCTGTGGCTCCCTGACCACCACCTCC | + |
Preference number: 3 (lower is better) Translates to: LGVIKPTGTFTL*EQPCGSLTTTS Trigger: GGAGGTGGTGGTCAGGGAGCCACAGGGCTGTTCTCATAAAGTGAACGTGCCTGTCGGCTTGATCACCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 72 bp | TCCTGGAGGCCCTGGTCCTCATGGAAACTCTCCTCGTaGGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGC | + |
Preference number: 3 (lower is better) Translates to: SWRPWSSWKLSS*VAFKAHCKVLC Trigger: GCAGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGGGCCTCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CCA 72 bp | AGGCCAGACTCATCCAACCGCACCTATGGTCAGGCTTaGCCCAGCTATCTGGGGACTCATTCTGGCCTAGCT | + |
Preference number: 3 (lower is better) Translates to: RPDSSNRTYGQA*PSYLGTHSGLA Trigger: AGCTAGGCCAGAATGAGTCCCCAGATAGCTGGGCCAAGCCTGACCATAGGTGCGGTTGGATGAGTCTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 72 bp | AAACTCTGGGCTGCTCTTCCCAGACCCTTTGACCACTaGGGTGAGGGGGTGGGGTGTGTATACAGATGGACC | + |
Preference number: 3 (lower is better) Translates to: KLWAALPRPFDH*GEGVGCVYRWT Trigger: GGTCCATCTGTATACACACCCCACCCCCTCACCCCAGTGGTCAAAGGGTCTGGGAAGAGCAGCCCAGAGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 72 bp | GGAGGCCCTGGTCCTCATGGAAACTCTCCTCGTGAGTaGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAG | + |
Preference number: 3 (lower is better) Translates to: GGPGPHGNSPRE*PSKPTVRCSAQ Trigger: CTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGGGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR CAA 90 bp | GAACATCACTGTCCAGGGCTAGCTGTGGACAGTCCGGACGGAGCCTGCAGGGTAGGAACCAGAATGGCTTaGTCAGAATGGTCCACTGGT | + |
Preference number: 3 (lower is better) Translates to: EHHCPGLAVDSPDGACRVGTRMA*SEWSTG Trigger: ACCAGTGGACCATTCTGACAAAGCCATTCTGGTTCC...TACCCTGCAGGCTCCGTCCGGACTGTCCACAGCTAGCCCTGGACAGTGATGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 72 bp | AGCCAAGCCTGGGCTAAGGCCTTGACGGGTTTGGAATaGACATCACTGTCCAGGGCTAGCTGTGGACAGTCC | + |
Preference number: 3 (lower is better) Translates to: SQAWAKALTGLE*TSLSRASCGQS Trigger: GGACTGTCCACAGCTAGCCCTGGACAGTGATGTTCATTCCAAACCCGTCAAGGCCTTAGCCCAGGCTTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR GCA 72 bp | GAGCAGTGTCACTCATCGGTGACACCCAGACAACGCTaGATGACAAACTCTGGGCTGCTCTTCCCAGACCCT | + |
Preference number: 3 (lower is better) Translates to: EQCHSSVTPRQR*MTNSGLLFPDP Trigger: AGGGTCTGGGAAGAGCAGCCCAGAGTTTGTCATGCAGCGTTGTCTGGGTGTCACCGATGAGTGACACTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 72 bp | ACATTAAGTTCTTCTAGGAGTAGAGGAGGGAGGGCGTaGGCTCCACTGAGCTCTGCTGCAAGGCTGGTGGCT | + |
Preference number: 3 (lower is better) Translates to: TLSSSRSRGGRA*APLSSAARLVA Trigger: AGCCACCAGCCTTGCAGCAGAGCTCAGTGGAGCCCACGCCCTCCCTCCTCTACTCCTAGAAGAACTTAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CCA 72 bp | CTAAAATGGAGCCTTCTGGTAGGATCTGGATCTGTGTaGCCCCGGCCTCTGCTTCAAGGGTGTGAAGCCTCC | + |
Preference number: 3 (lower is better) Translates to: LKWSLLVGSGSV*PRPLLQGCEAS Trigger: GGAGGCTTCACACCCTTGAAGCAGAGGCCGGGGCCACACAGATCCAGATCCTACCAGAAGGCTCCATTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 72 bp | ATCGGTGACACCCAGACAACGCTGCATGACAAACTCTaGGCTGCTCTTCCCAGACCCTTTGACCACTGGGGT | + |
Preference number: 3 (lower is better) Translates to: IGDTQTTLHDKL*AALPRPFDHWG Trigger: ACCCCAGTGGTCAAAGGGTCTGGGAAGAGCAGCCCAGAGTTTGTCATGCAGCGTTGTCTGGGTGTCACCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 72 bp | CTCTTCCCAGACCCTTTGACCACTGGGGTGAGGGGGTaGGGTGTGTATACAGATGGACCAAATGGCCTGATA | + |
Preference number: 3 (lower is better) Translates to: LFPDPLTTGVRG*GVYTDGPNGLI Trigger: TATCAGGCCATTTGGTCCATCTGTATACACACCCCACCCCCTCACCCCAGTGGTCAAAGGGTCTGGGAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 72 bp | AAGCAAGCCGGCAGTCAGGCTCCTCATTCCACCCACTaGCTTGTAGCTGATGAAAACACCCACGTCACTCAA | + |
Preference number: 3 (lower is better) Translates to: KQAGSQAPHSTH*LVADENTHVTQ Trigger: TTGAGTGACGTGGGTGTTTTCATCAGCTACAAGCCAGTGGGTGGAATGAGGAGCCTGACTGCCGGCTTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR CAA 90 bp | CCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTTCTCTTCCCTCTGAGTaGCAGTATGATGGCCGACTC | + |
Preference number: 3 (lower is better) Translates to: PHGNSPREWPSKPTVRCSSLPSE*QYDGRL Trigger: GAGTCGGCCATCATACTGCAACTCAGAGGGAAGAGA...AGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR CAA 90 bp | CCAGACGGAGCAGACTTATCCTGTGACCCAGAGGGTGTCTCTTCTAGAGTCTCGCAGGACTGGAGATATTaGAGCCGCCCATCTGATTCT | + |
Preference number: 3 (lower is better) Translates to: PDGADLSCDPEGVSSRVSQDWRY*SRPSDS Trigger: AGAATCAGATGGGCGGCTCAAATATCTCCAGTCCTG...CGAGACTCTAGAAGAGACACCCTCTGGGTCACAGGATAAGTCTGCTCCGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR TCA 72 bp | GCACGTTCACTTTATGAGAACAGCCCTGTGGCTCCCTaGCCACCACCTCCTACTGTCAGCAACATTCATCAC | + |
Preference number: 3 (lower is better) Translates to: ARSLYENSPVAP*PPPPTVSNIHH Trigger: GTGATGAATGTTGCTGACAGTAGGAGGTGGTGGTCAGGGAGCCACAGGGCTGTTCTCATAAAGTGAACGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR GCA 72 bp | CCATTAAAGCTTAAGCAACTGTCCCGGCGGGACCGCTaGGTCTGTCAGCATTATTCACAGCGAATCCTTACG | + |
Preference number: 3 (lower is better) Translates to: PLKLKQLSRRDR*VCQHYSQRILT Trigger: CGTAAGGATTCGCTGTGAATAATGCTGACAGACGCAGCGGTCCCGCCGGGACAGTTGCTTAAGCTTTAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 72 bp | TGGTCAGGCTTGGCCCAGCTATCTGGGGACTCATTCTaGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTC | + |
Preference number: 3 (lower is better) Translates to: WSGLAQLSGDSF*PSFLEVMIWNF Trigger: GAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCAGAATGAGTCCCCAGATAGCTGGGCCAAGCCTGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CCA 72 bp | ACTGAAGAACAACAAAGTCAGGCAGGAAGAGACACATaGTCCTCAGTAGGTGTGCCACGAGGACACAGGACG | + |
Preference number: 3 (lower is better) Translates to: TEEQQSQAGRDT*SSVGVPRGHRT Trigger: CGTCCTGTGTCCTCGTGGCACACCTACTGAGGACCATGTGTCTCTTCCTGCCTGACTTTGTTGTTCTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR CAA 90 bp | GATCAGCACTGGGGTGCTGACTTCAGGCTGAACTGTGTGGTGAGCGGCAGAATGCTGTTGGTTGTTCCTTaGGCAAGGAGGTTCCAAATA | + |
Preference number: 3 (lower is better) Translates to: DQHWGADFRLNCVVSGRMLLVVP*ARRFQI Trigger: TATTTGGAACCTCCTTGCCAAAGGAACAACCAACAG...CATTCTGCCGCTCACCACACAGTTCAGCCTGAAGTCAGCACCCCAGTGCTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR-3UTR CAA 90 bp | AGGGAAATGGGAGGAATGAGCTGGGCTCTTTCTGTGATGCATCTCCCAGCAGCTACCCATAGCTGTTGGTaGTTCCTTTGGCAAGGAGGT | + |
Preference number: 3 (lower is better) Translates to: REMGGMSWALSVMHLPAATHSCW*FLWQGG Trigger: ACCTCCTTGCCAAAGGAACAACCAACAGCTATGGGT...AGCTGCTGGGAGATGCATCACAGAAAGAGCCCAGCTCATTCCTCCCATTTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR-3UTR CAA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTTGTCAAACAAAGGTTaGCTGGTGATGCTGCACAGT | + |
Preference number: 3 (lower is better) Translates to: PGPHGNSPREWPSKPTVRLSNKG*LVMLHS Trigger: ACTGTGCAGCATCACCAGCAAACCTTTGTTTGACAA...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR TCA 72 bp | TCCATCCCTTCGGCACCCAGAAGTTTGTATCTACACTaGGGAAGCCTTCCTTCTCGGAGGTTCTCCTGCTTA | + |
Preference number: 3 (lower is better) Translates to: SIPSAPRSLYLH*GSLPSRRFSCL Trigger: TAAGCAGGAGAACCTCCGAGAAGGAAGGCTTCCTCAGTGTAGATACAAACTTCTGGGTGCCGAAGGGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 72 bp | TGTAGCCCAGGACTGGAGATATTTGAGCCGCCCATCTaGTTCTCTGGTCCTCATGCTTGTACAGCAAGCTCT | + |
Preference number: 3 (lower is better) Translates to: CSPGLEIFEPPI*FSGPHACTASS Trigger: AGAGCTTGCTGTACAAGCATGAGGACCAGAGAATCAGATGGGCGGCTCAAATATCTCCAGTCCTGGGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR CCA 72 bp | CTGGCTGGTTCAGGAGTGGAGATTTCTGCCTGGGTGTaGTCTTTACTGCTTGTATCATGGTGCTATTCCGAG | + |
Preference number: 3 (lower is better) Translates to: LAGSGVEISAWV*SLLLVSWCYSE Trigger: CTCGGAATAGCACCATGATACAAGCAGTAAAGACCACACCCAGGCAGAAATCTCCACTCCTGAACCAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR TCA 72 bp | CCTCTGAGTTGCAGTATGATGGCCGACTCCGCTGTATaGGCAGGTAGGCACCTTGAGTTTCATGTTGCATTA | + |
Preference number: 3 (lower is better) Translates to: PLSCSMMADSAV*AGRHLEFHVAL Trigger: TAATGCAACATGAAACTCAAGGTGCCTACCTGCTCATACAGCGGAGTCGGCCATCATACTGCAACTCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CCA 72 bp | TTTACTGCTTGTATCATGGTGCTATTCCGAGGTAAGTaGGGAACTTGTGTGGTAGGAGCTTCAGCTGGCAGA | + |
Preference number: 3 (lower is better) Translates to: FTACIMVLFRGK*GTCVVGASAGR Trigger: TCTGCCAGCTGAAGCTCCTACCACACAAGTTCCCCACTTACCTCGGAATAGCACCATGATACAAGCAGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR-3UTR CAA 90 bp | TGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCACAATGGTCTCTTGTaGTTTTGTCAAACAAAGGTT | + |
Preference number: 3 (lower is better) Translates to: WPSKPTVRCSAQTGAFWIHNGLL*FCQTKV Trigger: AACCTTTGTTTGACAAAACAACAAGAGACCATTGTG...AATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR CAA 90 bp | TGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCAACACAATGGTCTCTaGTTGTTTTGTCAAACAAAG | + |
Preference number: 3 (lower is better) Translates to: WPSKPTVRCSAQTGAFWIQHNGL*LFCQTK Trigger: CTTTGTTTGACAAAACAACAAGAGACCATTGTGTTG...AATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR TCA 72 bp | TACCTATGGAGAAGACGCTTTCAATCATCTGTTTACTaGTGTCCACTGAGACCACACTTGGGGGTGATCAAG | + |
Preference number: 3 (lower is better) Translates to: YLWRRRFQSSVY*CPLRPHLGVIK Trigger: CTTGATCACCCCCAAGTGTGGTCTCAGTGGACATCAGTAAACAGATGATTGAAAGCGTCTTCTCCATAGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR CCA 72 bp | CTGCATAGCTTTAAACTGCTCAGCACATTTGAGGAATaGAACCAGAATGGCTTTGTCAGAATGGTCCACTGG | + |
Preference number: 3 (lower is better) Translates to: LHSFKLLSTFEE*NQNGFVRMVHW Trigger: CCAGTGGACCATTCTGACAAAGCCATTCTGGTTCCATTCCTCAAATGTGCTGAGCAGTTTAAAGCTATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR TCA 72 bp | GGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTaGTGCTGCACAGTGAAACCTCCATCATCACTGAGA | + |
Preference number: 3 (lower is better) Translates to: GLLLFCQTKVCW*CCTVKPPSSLR Trigger: TCTCAGTGATGATGGAGGTTTCACTGTGCAGCATCACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
||
3UTR CCA 72 bp | CTGTCAGCATTATTCACAGCGAATCCTTACGCTAGCTaGTTGAGCCAACTGGGTTCTTACCCATCATTAAAT | + |
Preference number: 3 (lower is better) Translates to: LSALFTANPYAS*LSQLGSYPSLN Trigger: ATTTAATGATGGGTAAGAACCCAGTTGGCTCAACCAGCTAGCGTAAGGATTCGCTGTGAATAATGCTGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR-3UTR CAA 90 bp | CTTCAAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTGAAGTCAAATCGGTTGTCAAACAAAGGTTaGCTGGTGATGCTGCACAGT | + |
Preference number: 3 (lower is better) Translates to: LQSDLYCIAAFERVKSNRLSNKG*LVMLHS Trigger: ACTGTGCAGCATCACCAGCAAACCTTTGTTTGACAA...CCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
||
3UTR-3UTR CAA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCTGGTCTCTTGTTGTTTaGTCAAACAAAGGTTTGCTG | + |
Preference number: 3 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGWSLVV*SNKGLL Trigger: CAGCAAACCTTTGTTTGACAAAACAACAAGAGACCA...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR-3UTR CAA 90 bp | GGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCCAACACAATGGTCTCTaGTTGTTTTGTCAAACAAAG | + |
Preference number: 3 (lower is better) Translates to: GTLSFMLHYQCYNGSYGLQHNGL*LFCQTK Trigger: CTTTGTTTGACAAAACAACAAGAGACCATTGTGTTG...GAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
||
3UTR-3UTR CAA 90 bp | TGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATTTTAAGGCTTCACACACAAACTaGACACTTAAACTGCTGAGA | + |
Preference number: 3 (lower is better) Translates to: WPSFLEVMIWNFWLLNFKASHTN*TLKLLR Trigger: TCTCAGCAGTTTAAGTGTCAAGTTTGTGTGTGAAGC...CTTAAAATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR TCA 72 bp | CAACTTAGAAGCAGAAACATTGTCCAGGAAGCATGGTaGGATCAGCACAAGCCAATCAAAATGTTCTTTAGG | + |
Preference number: 3 (lower is better) Translates to: QLRSRNIVQEAW*DQHKPIKMFFR Trigger: CCTAAAGAACATTTTGATTGGCTTGTGCTGATCTCACCATGCTTCCTGGACAATGTTTCTGCTTCTAAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR TCA 72 bp | CCCTCACATAACACTACACACACTCAAAAGCATCAGTaGGATTCATACCTATGGAGAAGACGCTTTCAATCA | + |
Preference number: 3 (lower is better) Translates to: PSHNTTHTQKHQ*DSYLWRRRFQS Trigger: TGATTGAAAGCGTCTTCTCCATAGGTATGAATCTCACTGATGCTTTTGAGTGTGTGTAGTGTTATGTGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
||
3UTR-3UTR CAA 90 bp | TCATTCTGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATCACAATGGTCTCTTGTaGTTTTGTCAAACAAAGGTT | + |
Preference number: 3 (lower is better) Translates to: SFWPSFLEVMIWNFWLLNHNGLL*FCQTKV Trigger: AACCTTTGTTTGACAAAACAACAAGAGACCATTGTG...ATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCAGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 72 bp | AAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTaGAGTCAAATCGGAATCCTATTGAAACATTGCACA | + |
Preference number: 3 (lower is better) Translates to: KVICIALQRLKE*SQIGILLKHCT Trigger: TGTGCAATGTTTCAATAGGATTCCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR TCA 72 bp | TTTACACACTATCATGAAACTATCCCTAACTTAGTATaGAAAAGTCTAAGCTTCCCTGAATTCTGCACACTT | + |
Preference number: 3 (lower is better) Translates to: FTHYHETIPNLV*KSLSFPEFCTL Trigger: AAGTGTGCAGAATTCAGGGAAGCTTAGACTTTTTCATACTAAGTTAGGGATAGTTTCATGATAGTGTGTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR TCA 72 bp | CACCTCACTATGAGTTTACCTTGCTTAGATGACACGTaGACAATTAATTTTTGGTTGCTATATTTACACACT | + |
Preference number: 3 (lower is better) Translates to: HLTMSLPCLDDT*TINFWLLYLHT Trigger: AGTGTGTAAATATAGCAACCAAAAATTAATTGTTCACGTGTCATCTAAGCAAGGTAAACTCATAGTGAGGTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | CTGGTGGCTCCTCCCGAGGCCTGGAAAGCAAGCCGGCAGTCAGGCTCCTCATTCGTGTACAGGGCGACCTaGCCCGTGAGGTCTGCGATG | + |
Preference number: 4 (lower is better) Translates to: LVAPPEAWKASRQSGSSFVYRAT*PVRSAM Trigger: CATCGCAGACCTCACGGGCCAGGTCGCCCTGTACAC...GAATGAGGAGCCTGACTGCCGGCTTGCTTTCCAGGCCTCGGGAGGAGCCACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | CTGGTGGCTCCTCCCGAGGCCTGGAAAGCAAGCCGGCAGTCAGGCTCCTCATTCGGTCGCTGCAGCCATTaGCCTGGCTGGGACTCTGTT | + |
Preference number: 4 (lower is better) Translates to: LVAPPEAWKASRQSGSSFGRCSH*PGWDSV Trigger: AACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACC...GAATGAGGAGCCTGACTGCCGGCTTGCTTTCCAGGCCTCGGGAGGAGCCACCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | CCCCGGCCTCTGCTTCAAGGGTGTGAAGCCTCCTCCATCAGAGCCCAGCCGGCCGGTCTGCGATGCTGGTaGTATAGGGGTCGTGTTGTT | + |
Preference number: 4 (lower is better) Translates to: PRPLLQGCEASSIRAQPAGLRCW*YRGRVV Trigger: AACAACACGACCCCTATATCACCAGCATCGCAGACC...GGCCGGCTGGGCTCTGATGGAGGAGGCTTCACACCCTTGAAGCAGAGGCCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | CGACTGTGCAATGGAGGCGGGAGTGATCAGCACTGGGGTGCTGACTTCAGGCTGGGTCGCTGCAGCCATTaGCCTGGCTGGGACTCTGTT | + |
Preference number: 4 (lower is better) Translates to: RLCNGGGSDQHWGADFRLGRCSH*PGWDSV Trigger: AACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACC...CAGCCTGAAGTCAGCACCCCAGTGCTGATCACTCCCGCCTCCATTGCACAGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | CCCCGGCCTCTGCTTCAAGGGTGTGAAGCCTCCTCCATCAGAGCCCAGCCGGCCCATAGACTGGAGGGTTaGAGCAAGCACCATGTTGCT | + |
Preference number: 4 (lower is better) Translates to: PRPLLQGCEASSIRAQPAHRLEG*SKHHVA Trigger: AGCAACATGGTGCTTGCTCCAACCCTCCAGTCTATG...GGCCGGCTGGGCTCTGATGGAGGAGGCTTCACACCCTTGAAGCAGAGGCCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | GAACATCACTGTCCAGGGCTAGCTGTGGACAGTCCGGACGGAGCCTGCAGGGTAAAGCAGATCAACGCTTaGGAGGGCTGTGCCAGCTGG | + |
Preference number: 4 (lower is better) Translates to: EHHCPGLAVDSPDGACRVKQINA*EGCASW Trigger: CCAGCTGGCACAGCCCTCCCAAGCGTTGATCTGCTT...TACCCTGCAGGCTCCGTCCGGACTGTCCACAGCTAGCCCTGGACAGTGATGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CAA 72 bp | CAGGCCAGACTCATCCAACCGCACCTATGGTCAGGCTaGGCCCAGCTATCTGGGGACTCATTCTGGCCTAGC | + |
Preference number: 4 (lower is better) Translates to: QARLIQPHLWSG*AQLSGDSFWPS Trigger: GCTAGGCCAGAATGAGTCCCCAGATAGCTGGGCCAAGCCTGACCATAGGTGCGGTTGGATGAGTCTGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR TCA 90 bp | CTGTCCCGGCGGGACCGCTGCGTCTGTCAGCATTATTCACAGCGAATCCTTACGGGGGGACAGCAGGACTaGAGATACTGCTGTGGTGGT | + |
Preference number: 4 (lower is better) Translates to: LSRRDRCVCQHYSQRILTGGQQD*RYCCGG Trigger: ACCACCACAGCAGTATCTTCAGTCCTGCTGTCCCCC...CGTAAGGATTCGCTGTGAATAATGCTGACAGACGCAGCGGTCCCGCCGGGACAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR TCA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATCTGAGGGGCTCCCCCTaGCTGCTCAAAGGGAAATGG | + |
Preference number: 4 (lower is better) Translates to: VAFKAHCKVLCSDRSILDLRGSP*LLKGKW Trigger: CCATTTCCCTTTGAGCAGTCAGGGGGAGCCCCTCAG...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATGGGGCTCCCCCTGACTaGTCAAAGGGAAATGGGAGG | + |
Preference number: 4 (lower is better) Translates to: VAFKAHCKVLCSDRSILDGAPPD*SKGNGR Trigger: CCTCCCATTTCCCTTTGAGCAGTCAGGGGGAGCCCC...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | CCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGTGTACAGGGCGACCTaGCCCGTGAGGTCTGCGATG | + |
Preference number: 4 (lower is better) Translates to: PHGNSPREWPSKPTVRCSVYRAT*PVRSAM Trigger: CATCGCAGACCTCACGGGCCAGGTCGCCCTGTACAC...AGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | AGGGAAATGGGAGGAATGAGCTGGGCTCTTTCTGTGATGCATCTCCCAGCAGCTGTGTACAGGGCGACCTaGCCCGTGAGGTCTGCGATG | + |
Preference number: 4 (lower is better) Translates to: REMGGMSWALSVMHLPAAVYRAT*PVRSAM Trigger: CATCGCAGACCTCACGGGCCAGGTCGCCCTGTACAC...AGCTGCTGGGAGATGCATCACAGAAAGAGCCCAGCTCATTCCTCCCATTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | CTGTCCCGGCGGGACCGCTGCGTCTGTCAGCATTATTCACAGCGAATCCTTACGCCCACTGGTTGGCTTTaGGGCAGAAAGTGTACAGGG | + |
Preference number: 4 (lower is better) Translates to: LSRRDRCVCQHYSQRILTPTGWL*GRKCTG Trigger: CCCTGTACACTTTCTGCCCCAAAGCCAACCAGTGGG...CGTAAGGATTCGCTGTGAATAATGCTGACAGACGCAGCGGTCCCGCCGGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTCGAGCAGCCTGCTaGGATCGCCGTGTCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: VAFKAHCKVLCSDRSILDSRAAC*DRRVSS Trigger: AGAGGAGACACGGCGATCCCAGCAGGCTGCTCGAGA...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | GCTGTAGCCCAGGACTGGAGATATTTGAGCCGCCCATCTGATTCTCTGGTCCTCTCTCGAGCAGCCTGCTaGGATCGCCGTGTCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: AVAQDWRYLSRPSDSLVLSRAAC*DRRVSS Trigger: AGAGGAGACACGGCGATCCCAGCAGGCTGCTCGAGA...GAGGACCAGAGAATCAGATGGGCGGCTCAAATATCTCCAGTCCTGGGCTACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | CGACTGTGCAATGGAGGCGGGAGTGATCAGCACTGGGGTGCTGACTTCAGGCTGAGCCATTGGCCTGGCTaGGACTCTGTTTATCTCGAG | + |
Preference number: 4 (lower is better) Translates to: RLCNGGGSDQHWGADFRLSHWPG*DSVYLE Trigger: CTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCT...CAGCCTGAAGTCAGCACCCCAGTGCTGATCACTCCCGCCTCCATTGCACAGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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3UTR CAA 72 bp | TCCTGTGCCCGTGCCCTTCCTTCTCTTCCCTCTGAGTaGCAGTATGATGGCCGACTCCGCTGTATGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: SCARALPSLPSE*QYDGRLRCMSR Trigger: CCTGCTCATACAGCGGAGTCGGCCATCATACTGCAACTCAGAGGGAAGAGAAGGAAGGGCACGGGCACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | GCTGTAGCCCAGGACTGGAGATATTTGAGCCGCCCATCTGATTCTCTGGTCCTCCTGGCCCGTGAGGTCTaGGATGCTGGTGATATAGGG | + |
Preference number: 4 (lower is better) Translates to: AVAQDWRYLSRPSDSLVLLAREV*DAGDIG Trigger: CCCTATATCACCAGCATCGCAGACCTCACGGGCCAG...GAGGACCAGAGAATCAGATGGGCGGCTCAAATATCTCCAGTCCTGGGCTACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | CGACTGTGCAATGGAGGCGGGAGTGATCAGCACTGGGGTGCTGACTTCAGGCTGTCTTCTCCCACTGGTTaGCTTTGGGGCAGAAAGTGT | + |
Preference number: 4 (lower is better) Translates to: RLCNGGGSDQHWGADFRLSSPTG*LWGRKC Trigger: ACACTTTCTGCCCCAAAGCCAACCAGTGGGAGAAGA...CAGCCTGAAGTCAGCACCCCAGTGCTGATCACTCCCGCCTCCATTGCACAGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | GATCAGCACTGGGGTGCTGACTTCAGGCTGAACTGTGTGGTGAGCGGCAGAATGTCTCCAGGATATCTATaGGCCTCTGGTCGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: DQHWGADFRLNCVVSGRMSPGYL*ASGRCS Trigger: GCTGCAGCGACCAGAGGCCCATAGATATCCTGGAGA...CATTCTGCCGCTCACCACACAGTTCAGCCTGAAGTCAGCACCCCAGTGCTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGGCTCTGAAGGGGCTCTaGCTAGCAACCAGACTGCTG | + |
Preference number: 4 (lower is better) Translates to: PGPHGNSPREWPSKPTVRALKGL*LATRLL Trigger: CAGCAGTCTGGTTGCTAGCCAGAGCCCCTTCAGAGC...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ACATCCTTACGGACAAGGCTCTCAGGCTCCTCAAGCTCCATGCTCTGCTTAGCTGGGGGACAGCAGGACTaGAGATACTGCTGTGGTGGT | + |
Preference number: 4 (lower is better) Translates to: TSLRTRLSGSSSSMLCLAGGQQD*RYCCGG Trigger: ACCACCACAGCAGTATCTTCAGTCCTGCTGTCCCCC...AGCTAAGCAGAGCATGGAGCTTGAGGAGCCTGAGAGCCTTGTCCGTAAGGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | TGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTGGCCCGTGAGGTCTaGGATGCTGGTGATATAGGG | + |
Preference number: 4 (lower is better) Translates to: WPSKPTVRCSAQTGAFWILAREV*DAGDIG Trigger: CCCTATATCACCAGCATCGCAGACCTCACGGGCCAG...AATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | CTATTCCGAGGTAAGTGGGGAACTTGTGTGGTAGGAGCTTCAGCTGGCAGAGTGTTATCTCGAGCAGCCTaGTGGGATCGCCGTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: LFRGKWGTCVVGASAGRVLSRAA*WDRRVS Trigger: GGAGACACGGCGATCCCAGCAGGCTGCTCGAGATAA...CACTCTGCCAGCTGAAGCTCCTACCACACAAGTTCCCCACTTACCTCGGAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTCTCCAGGATATCTATaGGCCTCTGGTCGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: PGPHGNSPREWPSKPTVRSPGYL*ASGRCS Trigger: GCTGCAGCGACCAGAGGCCCATAGATATCCTGGAGA...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | AGCTGTTCCATGAGGAAGCCTGCGTGTCTTGAGGCGGACCCTCTCCCTTCACATTCTCATACTCATCCTTaGCCCGGCTCAGCATCTCCA | + |
Preference number: 4 (lower is better) Translates to: SCSMRKPACLEADPLPSHSHTHP*PGSASP Trigger: TGGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGA...ATGTGAAGGGAGAGGGTCCGCCTCAAGACACGCAGGCTTCCTCATGGAACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | AGCTGTTCCATGAGGAAGCCTGCGTGTCTTGAGGCGGACCCTCTCCCTTCACATTGGCTGGTTCAGGAGTaGAGATTTCTGCCTGGGTGT | + |
Preference number: 4 (lower is better) Translates to: SCSMRKPACLEADPLPSHWLVQE*RFLPGC Trigger: ACACCCAGGCAGAAATCTCCACTCCTGAACCAGCCA...ATGTGAAGGGAGAGGGTCCGCCTCAAGACACGCAGGCTTCCTCATGGAACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | CCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTAAGCAGATCAACGCTTaGGAGGGCTGTGCCAGCTGG | + |
Preference number: 4 (lower is better) Translates to: PHGNSPREWPSKPTVRCSKQINA*EGCASW Trigger: CCAGCTGGCACAGCCCTCCCAAGCGTTGATCTGCTT...AGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ACATCCTTACGGACAAGGCTCTCAGGCTCCTCAAGCTCCATGCTCTGCTTAGCTGCTGGGCTCTTTCTGTaGTGCATCTCCCAGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: TSLRTRLSGSSSSMLCLAAGLFL*CISQQL Trigger: AAGCTGCTGGGAGATGCATCACAGAAAGAGCCCAGC...AGCTAAGCAGAGCATGGAGCTTGAGGAGCCTGAGAGCCTTGTCCGTAAGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | CCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTTCAGCACTGGGGTGCTaGCTTCAGGCTGAACTGTGT | + |
Preference number: 4 (lower is better) Translates to: PHGNSPREWPSKPTVRCSSALGC*LQAELC Trigger: ACACAGTTCAGCCTGAAGTCAGCACCCCAGTGCTGA...AGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCAACAACTCCATCTTaGATCTCAGAGCCGAGCCCC | + |
Preference number: 4 (lower is better) Translates to: VAFKAHCKVLCSDRSILDSTTPS*ISEPSP Trigger: GGGGCTCGGCTCTGAGATCCAAGATGGAGTTGTTGA...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | AGCTGTTCCATGAGGAAGCCTGCGTGTCTTGAGGCGGACCCTCTCCCTTCACATTCTTCTCCCACTGGTTaGCTTTGGGGCAGAAAGTGT | + |
Preference number: 4 (lower is better) Translates to: SCSMRKPACLEADPLPSHSSPTG*LWGRKC Trigger: ACACTTTCTGCCCCAAAGCCAACCAGTGGGAGAAGA...ATGTGAAGGGAGAGGGTCCGCCTCAAGACACGCAGGCTTCCTCATGGAACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGAGCCATTGGCCTGGCTaGGACTCTGTTTATCTCGAG | + |
Preference number: 4 (lower is better) Translates to: PGPHGNSPREWPSKPTVRSHWPG*DSVYLE Trigger: CTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCT...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | GCTGTAGCCCAGGACTGGAGATATTTGAGCCGCCCATCTGATTCTCTGGTCCTCCTGCAGCCATTGGCCTaGCTGGGACTCTGTTTATCT | + |
Preference number: 4 (lower is better) Translates to: AVAQDWRYLSRPSDSLVLLQPLA*LGLCLS Trigger: AGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAG...GAGGACCAGAGAATCAGATGGGCGGCTCAAATATCTCCAGTCCTGGGCTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | CCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACAGGGCTGGCTGGTTCAGGAGTaGAGATTTCTGCCTGGGTGT | + |
Preference number: 4 (lower is better) Translates to: PTVRCSAQTGAFWILEQGWLVQE*RFLPGC Trigger: ACACCCAGGCAGAAATCTCCACTCCTGAACCAGCCA...GCCCTGTTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATGGTTGCAGGAACCAATaGAGAGCCTGCAATCGGGAT | + |
Preference number: 4 (lower is better) Translates to: VAFKAHCKVLCSDRSILDGCRNQ*RACNRD Trigger: ATCCCGATTGCAGGCTCTCCATTGGTTCCTGCAACC...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | TGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTGGTCTGCGATGCTGGTaGTATAGGGGTCGTGTTGTT | + |
Preference number: 4 (lower is better) Translates to: WPSKPTVRCSAQTGAFWIGLRCW*YRGRVV Trigger: AACAACACGACCCCTATATCACCAGCATCGCAGACC...AATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATAGGACTGGAGATATTTaGGCCGCCCATCTGATTCCT | + |
Preference number: 4 (lower is better) Translates to: VAFKAHCKVLCSDRSILDRTGDI*AAHLIP Trigger: AGGAATCAGATGGGCGGCTCAAATATCTCCAGTCCT...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATGTCAACCTGAGTTTCTaGAGCAGATCAACGCTTGGG | + |
Preference number: 4 (lower is better) Translates to: VAFKAHCKVLCSDRSILDVNLSF*SRSTLG Trigger: CCCAAGCGTTGATCTGCTTCAGAAACTCAGGTTGAC...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGAGTGTGTCCTGGAGCTaGGACTTGCTGAGGATAATG | + |
Preference number: 4 (lower is better) Translates to: PGPHGNSPREWPSKPTVRSVSWS*DLLRIM Trigger: CATTATCCTCAGCAAGTCTCAGCTCCAGGACACACT...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | ATCAATAGCAGCATCACAAAGCATCTTTACAGTTCTGACTGCGGCCAGAGAGCTCGCTTGGGAGGGCTGTaGCAGCTGGGTTTGCTAGGC | + |
Preference number: 4 (lower is better) Translates to: INSSITKHLYSSDCGQRARLGGL*QLGLLG Trigger: GCCTAGCAAACCCAGCTGGCACAGCCCTCCCAAGCG...AGCTCTCTGGCCGCAGTCAGAACTGTAAAGATGCTTTGTGATGCTGCTATTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR GCA 90 bp | ACATCCTTACGGACAAGGCTCTCAGGCTCCTCAAGCTCCATGCTCTGCTTAGCTCTTTCTCTGACTCTCTaGTGTCCCAACAGTGAGGGG | + |
Preference number: 4 (lower is better) Translates to: TSLRTRLSGSSSSMLCLALSLTL*CPNSEG Trigger: CCCCTCACTGTTGGGACAGCAGAGAGTCAGAGAAAG...AGCTAAGCAGAGCATGGAGCTTGAGGAGCCTGAGAGCCTTGTCCGTAAGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | AGGGAAATGGGAGGAATGAGCTGGGCTCTTTCTGTGATGCATCTCCCAGCAGCTTCTCATACTCATCCTTaGCCCGGCTCAGCATCTCCA | + |
Preference number: 4 (lower is better) Translates to: REMGGMSWALSVMHLPAASHTHP*PGSASP Trigger: TGGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGA...AGCTGCTGGGAGATGCATCACAGAAAGAGCCCAGCTCATTCCTCCCATTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | ACATCCTTACGGACAAGGCTCTCAGGCTCCTCAAGCTCCATGCTCTGCTTAGCTTGGGAGTGTGTAGCTTaGGGGATGTTTGTCACCCGA | + |
Preference number: 4 (lower is better) Translates to: TSLRTRLSGSSSSMLCLAWECVA*GMFVTR Trigger: TCGGGTGACAAACATCCCCCAAGCTACACACTCCCA...AGCTAAGCAGAGCATGGAGCTTGAGGAGCCTGAGAGCCTTGTCCGTAAGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | ACACTGAGGAAGCCTTCCTTCTCGGAGGTTCTCCTGCTTATCACAGTCATTCCTGCTCTGAAGGGGCTCTaGCTAGCAACCAGACTGCTG | + |
Preference number: 4 (lower is better) Translates to: TLRKPSFSEVLLLITVIPALKGL*LATRLL Trigger: CAGCAGTCTGGTTGCTAGCCAGAGCCCCTTCAGAGC...AGGAATGACTGTGATAAGCAGGAGAACCTCCGAGAAGGAAGGCTTCCTCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | AGCTGTTCCATGAGGAAGCCTGCGTGTCTTGAGGCGGACCCTCTCCCTTCACATCTGAAGATACTGCTGTaGTGGTTGCAGGAACCAATG | + |
Preference number: 4 (lower is better) Translates to: SCSMRKPACLEADPLPSHLKILL*WLQEPM Trigger: CATTGGTTCCTGCAACCACCACAGCAGTATCTTCAG...ATGTGAAGGGAGAGGGTCCGCCTCAAGACACGCAGGCTTCCTCATGGAACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CAA 72 bp | GAGCTGGGCTCTTTCTGTGATGCATCTCCCAGCAGCTaGTCTGTGTCCTCTGACTCTAGACCCATAGCTGTT | + |
Preference number: 4 (lower is better) Translates to: ELGSFCDASPSS*SVSSDSRPIAV Trigger: AACAGCTATGGGTCTAGAGTCAGAGGACACAGACAAGCTGCTGGGAGATGCATCACAGAAAGAGCCCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR TCA 90 bp | CCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACAGGGCCTACCACATCAGCCATaGGTTTTGCTATGCGATGAC | + |
Preference number: 4 (lower is better) Translates to: PTVRCSAQTGAFWILEQGLPHQP*VLLCDD Trigger: GTCATCGCATAGCAAAACTCATGGCTGATGTGGTAG...GCCCTGTTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ACATCCTTACGGACAAGGCTCTCAGGCTCCTCAAGCTCCATGCTCTGCTTAGCTGTCAACCTGAGTTTCTaGAGCAGATCAACGCTTGGG | + |
Preference number: 4 (lower is better) Translates to: TSLRTRLSGSSSSMLCLAVNLSF*SRSTLG Trigger: CCCAAGCGTTGATCTGCTTCAGAAACTCAGGTTGAC...AGCTAAGCAGAGCATGGAGCTTGAGGAGCCTGAGAGCCTTGTCCGTAAGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | TGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTATGGAAGGCTTTCTCTaGCTCTCTGCTGTCCCAACA | + |
Preference number: 4 (lower is better) Translates to: WPSKPTVRCSAQTGAFWIMEGFL*LSAVPT Trigger: TGTTGGGACAGCAGAGAGTCAGAGAAAGCCTTCCAT...AATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | TGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTAGTGTGTCCTGGAGCTaGGACTTGCTGAGGATAATG | + |
Preference number: 4 (lower is better) Translates to: WPSKPTVRCSAQTGAFWISVSWS*DLLRIM Trigger: CATTATCCTCAGCAAGTCTCAGCTCCAGGACACACT...AATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | TGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTTGCTGCTCTTGCTGCTaGTGTCTTAGAAGAAGGCTC | + |
Preference number: 4 (lower is better) Translates to: WPSKPTVRCSAQTGAFWICCSCC*CLRRRL Trigger: GAGCCTTCTTCTAAGACAGCAGCAGCAAGAGCAGCA...AATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | TCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACCCACTGGTTGGCTTTaGGGCAGAAAGTGTACAGGG | + |
Preference number: 4 (lower is better) Translates to: SKPTVRCSAQTGAFWILEPTGWL*GRKCTG Trigger: CCCTGTACACTTTCTGCCCCAAAGCCAACCAGTGGG...TTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | TCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAAGCTGTAGCCCAGGACTaGAGATATTTGAGCCGCCCA | + |
Preference number: 4 (lower is better) Translates to: SKPTVRCSAQTGAFWILEAVAQD*RYLSRP Trigger: TGGGCGGCTCAAATATCTCCAGTCCTGGGCTACAGC...TTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | ATCAATAGCAGCATCACAAAGCATCTTTACAGTTCTGACTGCGGCCAGAGAGCTTTATCTCGAGCAGCCTaGTGGGATCGCCGTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: INSSITKHLYSSDCGQRALSRAA*WDRRVS Trigger: GGAGACACGGCGATCCCAGCAGGCTGCTCGAGATAA...AGCTCTCTGGCCGCAGTCAGAACTGTAAAGATGCTTTGTGATGCTGCTATTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR GCA 90 bp | AATGGCAGTTACGGCCTCTACTACGGAACACAAAGACATCCCAGAAGTCTTAAGTTATCTCGAGCAGCCTaGTGGGATCGCCGTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: NGSYGLYYGTQRHPRSLKLSRAA*WDRRVS Trigger: GGAGACACGGCGATCCCAGCAGGCTGCTCGAGATAA...CTTAAGACTTCTGGGATGTCTTTGTGTTCCGTAGTAGAGGCCGTAACTGCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | CACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACGCTTGGGAGGGCTGTaGCAGCTGGGTTTGCTAGGC | + |
Preference number: 4 (lower is better) Translates to: HLEFHVALSVLQWQLRPLRLGGL*QLGLLG Trigger: GCCTAGCAAACCCAGCTGGCACAGCCCTCCCAAGCG...TAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | TGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTTCAGGATCCTGGTTTTaGTGCATAGACTGGAGGGTT | + |
Preference number: 4 (lower is better) Translates to: WPSKPTVRCSAQTGAFWISGSWF*CIDWRV Trigger: AACCCTCCAGTCTATGCAGCAAAACCAGGATCCTGA...AATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | ACACTGAGGAAGCCTTCCTTCTCGGAGGTTCTCCTGCTTATCACAGTCATTCCTAGCCATTGGCCTGGCTaGGACTCTGTTTATCTCGAG | + |
Preference number: 4 (lower is better) Translates to: TLRKPSFSEVLLLITVIPSHWPG*DSVYLE Trigger: CTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCT...AGGAATGACTGTGATAAGCAGGAGAACCTCCGAGAAGGAAGGCTTCCTCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | ACATCCTTACGGACAAGGCTCTCAGGCTCCTCAAGCTCCATGCTCTGCTTAGCTATGGGAGGAATGAGCTaGGCTCTTTCTGTGATGCAT | + |
Preference number: 4 (lower is better) Translates to: TSLRTRLSGSSSSMLCLAMGGMS*ALSVMH Trigger: ATGCATCACAGAAAGAGCCCAGCTCATTCCTCCCAT...AGCTAAGCAGAGCATGGAGCTTGAGGAGCCTGAGAGCCTTGTCCGTAAGGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | ACAACGCTGCATGACAAACTCTGGGCTGCTCTTCCCAGACCCTTTGACCACTGGGGTAACACCTTAGGCTaGGAAAATACTTCAGGATCC | + |
Preference number: 4 (lower is better) Translates to: TTLHDKLWAALPRPFDHWGNTLG*ENTSGS Trigger: GGATCCTGAAGTATTTTCCCAGCCTAAGGTGTTACC...CCAGTGGTCAAAGGGTCTGGGAAGAGCAGCCCAGAGTTTGTCATGCAGCGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR TCA 90 bp | ACGTACAGCAACAACACGTGTCTTAAAGATTCACAGATAAAAGGGAAACACAACCTGCTGTCCCAACAGTaGGGGGAGAGGGGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: TYSNNTCLKDSQIKGKHNLLSQQ*GERGSW Trigger: CCAGCTCCCCCTCTCCCCTCACTGTTGGGACAGCAG...GTTGTGTTTCCCTTTTATCTGTGAATCTTTAAGACACGTGTTGTTGCTGTACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ATCACTGAGAACGTCTCTAGGAAACATCCTTACGGACAAGGCTCTCAGGCTCCTATGGAAGGCTTTCTCTaGCTCTCTGCTGTCCCAACA | + |
Preference number: 4 (lower is better) Translates to: ITENVSRKHPYGQGSQAPMEGFL*LSAVPT Trigger: TGTTGGGACAGCAGAGAGTCAGAGAAAGCCTTCCAT...AGGAGCCTGAGAGCCTTGTCCGTAAGGATGTTTCCTAGAGACGTTCTCAGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | CCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACAGGGCAACCTGCAAGTAAACTaGATGAAGCGTACTGAGGAA | + |
Preference number: 4 (lower is better) Translates to: PTVRCSAQTGAFWILEQGNLQVN*MKRTEE Trigger: TTCCTCAGTACGCTTCATGCAGTTTACTTGCAGGTT...GCCCTGTTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | GACTCTAGACCCATAGCTGTTGGTTGTTCCTTTGGCAAGGAGGTTCCAAATAACCCCACTGGTTGGCTTTaGGGCAGAAAGTGTACAGGG | + |
Preference number: 4 (lower is better) Translates to: DSRPIAVGCSFGKEVPNNPTGWL*GRKCTG Trigger: CCCTGTACACTTTCTGCCCCAAAGCCAACCAGTGGG...GTTATTTGGAACCTCCTTGCCAAAGGAACAACCAACAGCTATGGGTCTAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | CTGTCCCGGCGGGACCGCTGCGTCTGTCAGCATTATTCACAGCGAATCCTTACGCAAATCTTTATTCACTaGCTCAACCAGATTGTGCAT | + |
Preference number: 4 (lower is better) Translates to: LSRRDRCVCQHYSQRILTQIFIH*LNQIVH Trigger: ATGCACAATCTGGTTGAGCCAGTGAATAAAGATTTG...CGTAAGGATTCGCTGTGAATAATGCTGACAGACGCAGCGGTCCCGCCGGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | CACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTAGGTCGCTGCAGCCATTaGCCTGGCTGGGACTCTGTT | + |
Preference number: 4 (lower is better) Translates to: HLEFHVALSVLQWQLRPLGRCSH*PGWDSV Trigger: AACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACC...TAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | GGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCGCTGTAGCCCAGGACTaGAGATATTTGAGCCGCCCA | + |
Preference number: 4 (lower is better) Translates to: GTLSFMLHYQCYNGSYGLAVAQD*RYLSRP Trigger: TGGGCGGCTCAAATATCTCCAGTCCTGGGCTACAGC...GAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | CCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACAGGGCATTTCTGCCTGGGTGTaGTCTTTACTGCTTGTATCA | + |
Preference number: 4 (lower is better) Translates to: PTVRCSAQTGAFWILEQGISAWV*SLLLVS Trigger: TGATACAAGCAGTAAAGACCACACCCAGGCAGAAAT...GCCCTGTTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGAATACTTCAGGATCCTaGTTTTGCTGCATAGACTGG | + |
Preference number: 4 (lower is better) Translates to: PGPHGNSPREWPSKPTVRNTSGS*FCCIDW Trigger: CCAGTCTATGCAGCAAAACCAGGATCCTGAAGTATT...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | GACTCTAGACCCATAGCTGTTGGTTGTTCCTTTGGCAAGGAGGTTCCAAATAACGGTCTGCGATGCTGGTaGTATAGGGGTCGTGTTGTT | + |
Preference number: 4 (lower is better) Translates to: DSRPIAVGCSFGKEVPNNGLRCW*YRGRVV Trigger: AACAACACGACCCCTATATCACCAGCATCGCAGACC...GTTATTTGGAACCTCCTTGCCAAAGGAACAACCAACAGCTATGGGTCTAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR TCA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTCTGAGGGGCTCCCCCTaGCTGCTCAAAGGGAAATGG | + |
Preference number: 4 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGLRGSP*LLKGKW Trigger: CCATTTCCCTTTGAGCAGTCAGGGGGAGCCCCTCAG...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTGTTGCTCAGGGAGGCTaGGACTGCTGCTCTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGVAQGG*DCCSCC Trigger: GCAGCAAGAGCAGCAGTCTCAGCCTCCCTGAGCAAC...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATATCAGCCATGAGTTTTaGTATGCGATGACAGTCATT | + |
Preference number: 4 (lower is better) Translates to: VAFKAHCKVLCSDRSILDISHEF*YAMTVI Trigger: AATGACTGTCATCGCATAGCAAAACTCATGGCTGAT...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | TCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAAAGGAGTGGAGATTTCTaGCTGGGTGTGGTCTTTACT | + |
Preference number: 4 (lower is better) Translates to: SKPTVRCSAQTGAFWILERSGDF*LGVVFT Trigger: AGTAAAGACCACACCCAGGCAGAAATCTCCACTCCT...TTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | GGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCCTTTCTCTGACTCTCTaGTGTCCCAACAGTGAGGGG | + |
Preference number: 4 (lower is better) Translates to: GTLSFMLHYQCYNGSYGLLSLTL*CPNSEG Trigger: CCCCTCACTGTTGGGACAGCAGAGAGTCAGAGAAAG...GAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | CTGTCCCGGCGGGACCGCTGCGTCTGTCAGCATTATTCACAGCGAATCCTTACGTCTATACAGAAGAAATaGTTCATGGAGCTGAAATTC | + |
Preference number: 4 (lower is better) Translates to: LSRRDRCVCQHYSQRILTSIQKK*FMELKF Trigger: GAATTTCAGCTCCATGAACCATTTCTTCTGTATAGA...CGTAAGGATTCGCTGTGAATAATGCTGACAGACGCAGCGGTCCCGCCGGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | GGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTCTCATACTCATCCTTaGCCCGGCTCAGCATCTCCA | + |
Preference number: 4 (lower is better) Translates to: GTLSFMLHYQCYNGSYGLSHTHP*PGSASP Trigger: TGGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGA...GAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | GGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCGGTTGCAGGAACCAATaGAGAGCCTGCAATCGGGAT | + |
Preference number: 4 (lower is better) Translates to: GTLSFMLHYQCYNGSYGLGCRNQ*RACNRD Trigger: ATCCCGATTGCAGGCTCTCCATTGGTTCCTGCAACC...GAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | AATGGCAGTTACGGCCTCTACTACGGAACACAAAGACATCCCAGAAGTCTTAAGAGGACTGGAGATATTTaGGCCGCCCATCTGATTCCT | + |
Preference number: 4 (lower is better) Translates to: NGSYGLYYGTQRHPRSLKRTGDI*AAHLIP Trigger: AGGAATCAGATGGGCGGCTCAAATATCTCCAGTCCT...CTTAAGACTTCTGGGATGTCTTTGTGTTCCGTAGTAGAGGCCGTAACTGCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ATAAATAGAAACCATGGCAGATCAATAGCAGCATCACAAAGCATCTTTACAGTTCTGCTGTCCCAACAGTaGGGGGAGAGGGGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: INRNHGRSIAASQSIFTVLLSQQ*GERGSW Trigger: CCAGCTCCCCCTCTCCCCTCACTGTTGGGACAGCAG...AACTGTAAAGATGCTTTGTGATGCTGCTATTGATCTGCCATGGTTTCTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR GCA 90 bp | ACGTACAGCAACAACACGTGTCTTAAAGATTCACAGATAAAAGGGAAACACAACGGGGCTCCCCCTGACTaGTCAAAGGGAAATGGGAGG | + |
Preference number: 4 (lower is better) Translates to: TYSNNTCLKDSQIKGKHNGAPPD*SKGNGR Trigger: CCTCCCATTTCCCTTTGAGCAGTCAGGGGGAGCCCC...GTTGTGTTTCCCTTTTATCTGTGAATCTTTAAGACACGTGTTGTTGCTGTACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTGCAACCAGACTGCTGTaGCTTAGCTCAGGGACTGGC | + |
Preference number: 4 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGATRLL*LSSGTG Trigger: GCCAGTCCCTGAGCTAAGCCACAGCAGTCTGGTTGC...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTGCTGGGCTCTTTCTGTaGTGCATCTCCCAGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGAGLFL*CISQQL Trigger: AAGCTGCTGGGAGATGCATCACAGAAAGAGCCCAGC...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTTCAGCACTGGGGTGCTaGCTTCAGGCTGAACTGTGT | + |
Preference number: 4 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGSALGC*LQAELC Trigger: ACACAGTTCAGCCTGAAGTCAGCACCCCAGTGCTGA...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCGCTGTGGGGTCAACCTaGGTTTCTGAAGCAGATCAA | + |
Preference number: 4 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGAVGST*VSEADQ Trigger: TTGATCTGCTTCAGAAACTCAGGTTGACCCCACAGC...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCTGCTGCTCTTGCTGCTaGTGTCTTAGAAGAAGGCTC | + |
Preference number: 4 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGCCSCC*CLRRRL Trigger: GAGCCTTCTTCTAAGACAGCAGCAGCAAGAGCAGCA...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | CTATTCCGAGGTAAGTGGGGAACTTGTGTGGTAGGAGCTTCAGCTGGCAGAGTGCAAATCTTTATTCACTaGCTCAACCAGATTGTGCAT | + |
Preference number: 4 (lower is better) Translates to: LFRGKWGTCVVGASAGRVQIFIH*LNQIVH Trigger: ATGCACAATCTGGTTGAGCCAGTGAATAAAGATTTG...CACTCTGCCAGCTGAAGCTCCTACCACACAAGTTCCCCACTTACCTCGGAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | TGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATTTTAAGCTGCAGCCATTGGCCTaGCTGGGACTCTGTTTATCT | + |
Preference number: 4 (lower is better) Translates to: WPSFLEVMIWNFWLLNFKLQPLA*LGLCLS Trigger: AGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAG...CTTAAAATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CAA 72 bp | TGCTCAGCACATTTGAGGAATGGAACCAGAATGGCTTaGTCAGAATGGTCCACTGGTCCTTTTGCCAAAGTG | + |
Preference number: 4 (lower is better) Translates to: CSAHLRNGTRMA*SEWSTGPFAKV Trigger: CACTTTGGCAAAAGGACCAGTGGACCATTCTGACAAAGCCATTCTGGTTCCATTCCTCAAATGTGCTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR TCA 90 bp | ATAAATAGAAACCATGGCAGATCAATAGCAGCATCACAAAGCATCTTTACAGTTGTTGCTCAGGGAGGCTaGGACTGCTGCTCTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: INRNHGRSIAASQSIFTVVAQGG*DCCSCC Trigger: GCAGCAAGAGCAGCAGTCTCAGCCTCCCTGAGCAAC...AACTGTAAAGATGCTTTGTGATGCTGCTATTGATCTGCCATGGTTTCTATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | TTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTACTCAACAACTCCATCTTaGATCTCAGAGCCGAGCCCC | + |
Preference number: 4 (lower is better) Translates to: LSFMLHYQCYNGSYGLYYSTTPS*ISEPSP Trigger: GGGGCTCGGCTCTGAGATCCAAGATGGAGTTGTTGA...GTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | TGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTTCTATACAGAAGAAATaGTTCATGGAGCTGAAATTC | + |
Preference number: 4 (lower is better) Translates to: WPSKPTVRCSAQTGAFWISIQKK*FMELKF Trigger: GAATTTCAGCTCCATGAACCATTTCTTCTGTATAGA...AATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | CTTCAAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTGAAGTCAAATCGGCTGCAGCCATTGGCCTaGCTGGGACTCTGTTTATCT | + |
Preference number: 4 (lower is better) Translates to: LQSDLYCIAAFERVKSNRLQPLA*LGLCLS Trigger: AGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAG...CCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | TGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATTTTAAGGGCTGTGCTTGTATTTaGTCATGCTGTGGGGTCAAC | + |
Preference number: 4 (lower is better) Translates to: WPSFLEVMIWNFWLLNFKGCACI*SCCGVN Trigger: GTTGACCCCACAGCATGACCAAATACAAGCACAGCC...CTTAAAATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | TTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTACGGAACACAAAGACATAGACTGGAGGGTTaGAGCAAGCACCATGTTGCT | + |
Preference number: 4 (lower is better) Translates to: LHYQCYNGSYGLYYGTQRHRLEG*SKHHVA Trigger: AGCAACATGGTGCTTGCTCCAACCCTCCAGTCTATG...TCTTTGTGTTCCGTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTGCTGTGGGGTCAACCTaGGTTTCTGAAGCAGATCAA | + |
Preference number: 4 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGAVGST*VSEADQ Trigger: TTGATCTGCTTCAGAAACTCAGGTTGACCCCACAGC...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | ATAAATAGAAACCATGGCAGATCAATAGCAGCATCACAAAGCATCTTTACAGTTCTGGCCCGTGAGGTCTaGGATGCTGGTGATATAGGG | + |
Preference number: 4 (lower is better) Translates to: INRNHGRSIAASQSIFTVLAREV*DAGDIG Trigger: CCCTATATCACCAGCATCGCAGACCTCACGGGCCAG...AACTGTAAAGATGCTTTGTGATGCTGCTATTGATCTGCCATGGTTTCTATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR GCA 90 bp | CACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTATCAGGATCCTGGTTTTaGTGCATAGACTGGAGGGTT | + |
Preference number: 4 (lower is better) Translates to: HLEFHVALSVLQWQLRPLSGSWF*CIDWRV Trigger: AACCCTCCAGTCTATGCAGCAAAACCAGGATCCTGA...TAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTTCTTCTCCCACTGGTTaGCTTTGGGGCAGAAAGTGT | + |
Preference number: 4 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGSSPTG*LWGRKC Trigger: ACACTTTCTGCCCCAAAGCCAACCAGTGGGAGAAGA...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | TTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTACGGAACACAAAGAATGGGAGGAATGAGCTaGGCTCTTTCTGTGATGCAT | + |
Preference number: 4 (lower is better) Translates to: LHYQCYNGSYGLYYGTQRMGGMS*ALSVMH Trigger: ATGCATCACAGAAAGAGCCCAGCTCATTCCTCCCAT...TCTTTGTGTTCCGTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | ACGTACAGCAACAACACGTGTCTTAAAGATTCACAGATAAAAGGGAAACACAACTGGGAGTGTGTAGCTTaGGGGATGTTTGTCACCCGA | + |
Preference number: 4 (lower is better) Translates to: TYSNNTCLKDSQIKGKHNWECVA*GMFVTR Trigger: TCGGGTGACAAACATCCCCCAAGCTACACACTCCCA...GTTGTGTTTCCCTTTTATCTGTGAATCTTTAAGACACGTGTTGTTGCTGTACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | ATAAATAGAAACCATGGCAGATCAATAGCAGCATCACAAAGCATCTTTACAGTTGCAACCAGACTGCTGTaGCTTAGCTCAGGGACTGGC | + |
Preference number: 4 (lower is better) Translates to: INRNHGRSIAASQSIFTVATRLL*LSSGTG Trigger: GCCAGTCCCTGAGCTAAGCCACAGCAGTCTGGTTGC...AACTGTAAAGATGCTTTGTGATGCTGCTATTGATCTGCCATGGTTTCTATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTGGCTGTGCTTGTATTTaGTCATGCTGTGGGGTCAAC | + |
Preference number: 4 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGGCACI*SCCGVN Trigger: GTTGACCCCACAGCATGACCAAATACAAGCACAGCC...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | TTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTACAGGAGTGGAGATTTCTaGCTGGGTGTGGTCTTTACT | + |
Preference number: 4 (lower is better) Translates to: LSFMLHYQCYNGSYGLYYRSGDF*LGVVFT Trigger: AGTAAAGACCACACCCAGGCAGAAATCTCCACTCCT...GTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | ATAAATAGAAACCATGGCAGATCAATAGCAGCATCACAAAGCATCTTTACAGTTTCTCCAGGATATCTATaGGCCTCTGGTCGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: INRNHGRSIAASQSIFTVSPGYL*ASGRCS Trigger: GCTGCAGCGACCAGAGGCCCATAGATATCCTGGAGA...AACTGTAAAGATGCTTTGTGATGCTGCTATTGATCTGCCATGGTTTCTATTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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3UTR CAA 72 bp | TCAGCATTATTCACAGCGAATCCTTACGCTAGCTGGTaGAGCCAACTGGGTTCTTACCCATCATTAAATAGT | + |
Preference number: 4 (lower is better) Translates to: SALFTANPYASW*SQLGSYPSLNS Trigger: ACTATTTAATGATGGGTAAGAACCCAGTTGGCTCAACCAGCTAGCGTAAGGATTCGCTGTGAATAATGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | CTTCAAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTGAAGTCAAATCGGGGTAACACCTTAGGCTaGGAAAATACTTCAGGATCC | + |
Preference number: 4 (lower is better) Translates to: LQSDLYCIAAFERVKSNRGNTLG*ENTSGS Trigger: GGATCCTGAAGTATTTTCCCAGCCTAAGGTGTTACC...CCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | ACGTACAGCAACAACACGTGTCTTAAAGATTCACAGATAAAAGGGAAACACAACCTGAAGATACTGCTGTaGTGGTTGCAGGAACCAATG | + |
Preference number: 4 (lower is better) Translates to: TYSNNTCLKDSQIKGKHNLKILL*WLQEPM Trigger: CATTGGTTCCTGCAACCACCACAGCAGTATCTTCAG...GTTGTGTTTCCCTTTTATCTGTGAATCTTTAAGACACGTGTTGTTGCTGTACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCGGTTGTCTTTGTTCTTaGTCAGAACCTGCAAGTAAA | + |
Preference number: 4 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGGCLCS*SEPASK Trigger: TTTACTTGCAGGTTCTGACCAAGAACAAAGACAACC...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR GCA 90 bp | TGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATTTTAAGATCAGCCATGAGTTTTaGTATGCGATGACAGTCATT | + |
Preference number: 4 (lower is better) Translates to: WPSFLEVMIWNFWLLNFKISHEF*YAMTVI Trigger: AATGACTGTCATCGCATAGCAAAACTCATGGCTGAT...CTTAAAATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR GCA 90 bp | CTTCAAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTGAAGTCAAATCGGAACCTGCAAGTAAACTaGATGAAGCGTACTGAGGAA | + |
Preference number: 4 (lower is better) Translates to: LQSDLYCIAAFERVKSNRNLQVN*MKRTEE Trigger: TTCCTCAGTACGCTTCATGCAGTTTACTTGCAGGTT...CCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCAAATCTTTATTCACTaGCTCAACCAGATTGTGCAT | + |
Preference number: 4 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGQIFIH*LNQIVH Trigger: ATGCACAATCTGGTTGAGCCAGTGAATAAAGATTTG...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CCA 90 bp | AGTGGAGATTTCTGCCTGGGTGTGGTCTTTACTGCTTGTATCATGGTGCTATTCTCTATACAGAAGAAATaGTTCATGGAGCTGAAATTC | + |
Preference number: 4 (lower is better) Translates to: SGDFCLGVVFTACIMVLFSIQKK*FMELKF Trigger: GAATTTCAGCTCCATGAACCATTTCTTCTGTATAGA...GAATAGCACCATGATACAAGCAGTAAAGACCACACCCAGGCAGAAATCTCCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CCA 90 bp | CTTCAAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTGAAGTCAAATCGGAATACTTCAGGATCCTaGTTTTGCTGCATAGACTGG | + |
Preference number: 4 (lower is better) Translates to: LQSDLYCIAAFERVKSNRNTSGS*FCCIDW Trigger: CCAGTCTATGCAGCAAAACCAGGATCCTGAAGTATT...CCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR TCA 90 bp | ATAAATAGAAACCATGGCAGATCAATAGCAGCATCACAAAGCATCTTTACAGTTCTACCACATCAGCCATaGGTTTTGCTATGCGATGAC | + |
Preference number: 4 (lower is better) Translates to: INRNHGRSIAASQSIFTVLPHQP*VLLCDD Trigger: GTCATCGCATAGCAAAACTCATGGCTGATGTGGTAG...AACTGTAAAGATGCTTTGTGATGCTGCTATTGATCTGCCATGGTTTCTATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CCA 90 bp | ACGTACAGCAACAACACGTGTCTTAAAGATTCACAGATAAAAGGGAAACACAACATTTCTGCCTGGGTGTaGTCTTTACTGCTTGTATCA | + |
Preference number: 4 (lower is better) Translates to: TYSNNTCLKDSQIKGKHNISAWV*SLLLVS Trigger: TGATACAAGCAGTAAAGACCACACCCAGGCAGAAAT...GTTGTGTTTCCCTTTTATCTGTGAATCTTTAAGACACGTGTTGTTGCTGTACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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3UTR CAA 72 bp | GGCCCAAGCGGGGTGCTCATAGAAAATATACTTCACTaGAACAAATACCTTCCAAAGAGTCAACTTAAATTC | + |
Preference number: 4 (lower is better) Translates to: GPSGVLIENILH*NKYLPKSQLKF Trigger: GAATTTAAGTTGACTCTTTGGAAGGTATTTGTTCAAGTGAAGTATATTTTCTATGAGCACCCCGCTTGGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 90 bp | CCGCCAGACTCATCTCTTGCTCAGCTCGACTCAACAACTCCATCTTaGATCTCAGAGCCGAGCCCCTCCGGCGGGGGCGGACTGTGGAAC | + |
Preference number: 5 (lower is better) Translates to: PPDSSLAQLDSTTPS*ISEPSPSGGGGLWN Trigger: GTTCCACAGTCCGCCCCCGCCGGAGGGGCTCGGCTCTGAGATCCAAGATGGAGTTGTTGAGTCGAGCTGAGCAAGAGATGAGTCTGGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 90 bp | CCAGGATATCTATGGGCCTCTGGTCGCTGCAGCCATTGGCCTGGCTaGGACTCTGTTTATCTCGAGCAGCCTGCTGGGATCGCCGTGTCT | + |
Preference number: 5 (lower is better) Translates to: PGYLWASGRCSHWPG*DSVYLEQPAGIAVS Trigger: AGACACGGCGATCCCAGCAGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCAGAGGCCCATAGATATCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS-3UTR CAA 90 bp | AGCTGTTCCATGAGGAAGCCTGCGTGTCTTGAGGCGGACCCTCTCCCTTCACATGGCCCTGGGAACCGTTaGCTGGAACACACTGGGGGA | + |
Preference number: 5 (lower is better) Translates to: SCSMRKPACLEADPLPSHGPGNR*LEHTGG Trigger: TCCCCCAGTGTGTTCCAGCAAACGGTTCCCAGGGCC...ATGTGAAGGGAGAGGGTCCGCCTCAAGACACGCAGGCTTCCTCATGGAACAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS TCA 90 bp | GGCCCTGGGAACCGTTTGCTGGAACACACTGGGGGACAGCAGGACTaGAGATACTGCTGTGGTGGTTGCAGGAACCAATGGAGAGCCTGC | + |
Preference number: 5 (lower is better) Translates to: GPGNRLLEHTGGQQD*RYCCGGCRNQWRAC Trigger: GCAGGCTCTCCATTGGTTCCTGCAACCACCACAGCAGTATCTTCAGTCCTGCTGTCCCCCAGTGTGTTCCAGCAAACGGTTCCCAGGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 90 bp | ATCTCCAGGATATCTATGGGCCTCTGGTCGCTGCAGCCATTGGCCTaGCTGGGACTCTGTTTATCTCGAGCAGCCTGCTGGGATCGCCGT | + |
Preference number: 5 (lower is better) Translates to: ISRISMGLWSLQPLA*LGLCLSRAACWDRR Trigger: ACGGCGATCCCAGCAGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCAGAGGCCCATAGATATCCTGGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 90 bp | GAGCTGGCTTTCCTCTCTAGGTCTGCGGCCCTGGGAACCGTTTGCTaGAACACACTGGGGGACAGCAGGACTGAAGATACTGCTGTGGTG | + |
Preference number: 5 (lower is better) Translates to: ELAFLSRSAALGTVC*NTLGDSRTEDTAVV Trigger: CACCACAGCAGTATCTTCAGTCCTGCTGTCCCCCAGTGTGTTCCAGCAAACGGTTCCCAGGGCCGCAGACCTAGAGAGGAAAGCCAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | AGCTGTTCCATGAGGAAGCCTGCGTGTCTTGAGGCGGACCCTCTCCCTTCACATGAAGCAGATCAACGCTaGGGAGGGCTGTGCCAGCTG | + |
Preference number: 5 (lower is better) Translates to: SCSMRKPACLEADPLPSHEADQR*GGLCQL Trigger: CAGCTGGCACAGCCCTCCCAAGCGTTGATCTGCTTC...ATGTGAAGGGAGAGGGTCCGCCTCAAGACACGCAGGCTTCCTCATGGAACAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATGGCCCTGGGAACCGTTaGCTGGAACACACTGGGGGA | + |
Preference number: 5 (lower is better) Translates to: VAFKAHCKVLCSDRSILDGPGNR*LEHTGG Trigger: TCCCCCAGTGTGTTCCAGCAAACGGTTCCCAGGGCC...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS GCA 90 bp | CTGCAGCCATTGGCCTGGCTGGGACTCTGTTTATCTCGAGCAGCCTaGTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGT | + |
Preference number: 5 (lower is better) Translates to: LQPLAWLGLCLSRAA*WDRRVSSSTTSAMS Trigger: ACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 90 bp | TCAGCATCTCCAGGATATCTATGGGCCTCTGGTCGCTGCAGCCATTaGCCTGGCTGGGACTCTGTTTATCTCGAGCAGCCTGCTGGGATC | + |
Preference number: 5 (lower is better) Translates to: SASPGYLWASGRCSH*PGWDSVYLEQPAGI Trigger: GATCCCAGCAGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCAGAGGCCCATAGATATCCTGGAGATGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 90 bp | TCATCCTTGGCCCGGCTCAGCATCTCCAGGATATCTATGGGCCTCTaGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTTATCTCGA | + |
Preference number: 5 (lower is better) Translates to: SSLARLSISRISMGL*SLQPLAWLGLCLSR Trigger: TCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCAGAGGCCCATAGATATCCTGGAGATGCTGAGCCGGGCCAAGGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 90 bp | TCTCATACTCATCCTTGGCCCGGCTCAGCATCTCCAGGATATCTATaGGCCTCTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTT | + |
Preference number: 5 (lower is better) Translates to: SHTHPWPGSASPGYL*ASGRCSHWPGWDSV Trigger: AACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCAGAGGCCCATAGATATCCTGGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 90 bp | GCTGGAACACACTGGGGGACAGCAGGACTGAAGATACTGCTGTGGTaGTTGCAGGAACCAATGGAGAGCCTGCAATCGGGATGGCACTGG | + |
Preference number: 5 (lower is better) Translates to: AGTHWGTAGLKILLW*LQEPMESLQSGWHW Trigger: CCAGTGCCATCCCGATTGCAGGCTCTCCATTGGTTCCTGCAACCACCACAGCAGTATCTTCAGTCCTGCTGTCCCCCAGTGTGTTCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | GAACATCACTGTCCAGGGCTAGCTGTGGACAGTCCGGACGGAGCCTGCAGGGTATCCAAGCGGCTGTGCTaGTATTTGGTCATGCTGTGG | + |
Preference number: 5 (lower is better) Translates to: EHHCPGLAVDSPDGACRVSKRLC*YLVMLW Trigger: CCACAGCATGACCAAATACAAGCACAGCCGCTTGGA...TACCCTGCAGGCTCCGTCCGGACTGTCCACAGCTAGCCCTGGACAGTGATGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CAA 90 bp | ACAACGCTGCATGACAAACTCTGGGCTGCTCTTCCCAGACCCTTTGACCACTGGCTCAGGGGTGGCCAGTaGGCCAGCTGCCGAAGAAAA | + |
Preference number: 5 (lower is better) Translates to: TTLHDKLWAALPRPFDHWLRGGQ*ASCRRK Trigger: TTTTCTTCGGCAGCTGGCCAACTGGCCACCCCTGAG...CCAGTGGTCAAAGGGTCTGGGAAGAGCAGCCCAGAGTTTGTCATGCAGCGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CAA 90 bp | CCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACAGGGCCTCTCATACTCATCCTaGGCCCGGCTCAGCATCTCC | + |
Preference number: 5 (lower is better) Translates to: PTVRCSAQTGAFWILEQGLSYSS*ARLSIS Trigger: GGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGAG...GCCCTGTTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | CCAGACGGAGCAGACTTATCCTGTGACCCAGAGGGTGTCTCTTCTAGAGTCTCGCTCTCATACTCATCCTaGGCCCGGCTCAGCATCTCC | + |
Preference number: 5 (lower is better) Translates to: PDGADLSCDPEGVSSRVSLSYSS*ARLSIS Trigger: GGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGAG...CGAGACTCTAGAAGAGACACCCTCTGGGTCACAGGATAAGTCTGCTCCGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CAA 90 bp | CCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGAAGCAGATCAACGCTaGGGAGGGCTGTGCCAGCTG | + |
Preference number: 5 (lower is better) Translates to: PHGNSPREWPSKPTVRCSEADQR*GGLCQL Trigger: CAGCTGGCACAGCCCTCCCAAGCGTTGATCTGCTTC...AGAGCACCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS GCA 90 bp | GAGCTGAGACTTGCTGAGGATAATGGAAGGCTTTCTCTGACTCTCTaGTGTCCCAACAGTGAGGGGAGAGGGGGAGCTGGCTTTCCTCTC | + |
Preference number: 5 (lower is better) Translates to: ELRLAEDNGRLSLTL*CPNSEGRGGAGFPL Trigger: GAGAGGAAAGCCAGCTCCCCCTCTCCCCTCACTGTTGGGACAGCAGAGAGTCAGAGAAAGCCTTCCATTATCCTCAGCAAGTCTCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 90 bp | CAGCCATTGGCCTGGCTGGGACTCTGTTTATCTCGAGCAGCCTGCTaGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGTTTT | + |
Preference number: 5 (lower is better) Translates to: QPLAWLGLCLSRAAC*DRRVSSSTTSAMSF Trigger: AAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 90 bp | TTTGCTGGAACACACTGGGGGACAGCAGGACTGAAGATACTGCTGTaGTGGTTGCAGGAACCAATGGAGAGCCTGCAATCGGGATGGCAC | + |
Preference number: 5 (lower is better) Translates to: FAGTHWGTAGLKILL*WLQEPMESLQSGWH Trigger: GTGCCATCCCGATTGCAGGCTCTCCATTGGTTCCTGCAACCACCACAGCAGTATCTTCAGTCCTGCTGTCCCCCAGTGTGTTCCAGCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS TCA 90 bp | TTCCAAGCGGCTGTGCTTGTATTTGGTCATGCTGTGGGGTCAACCTaGGTTTCTGAAGCAGATCAACGCTTGGGAGGGCTGTGCCAGCTG | + |
Preference number: 5 (lower is better) Translates to: FQAAVLVFGHAVGST*VSEADQRLGGLCQL Trigger: CAGCTGGCACAGCCCTCCCAAGCGTTGATCTGCTTCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAAGCACAGCCGCTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 |
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CDS CCA 90 bp | TCAGATGTTTATGACCAGACGGAGCAGACCTCTCATACTCATCCTTaGCCCGGCTCAGCATCTCCAGGATATCTATGGGCCTCTGGTCGC | + |
Preference number: 5 (lower is better) Translates to: SDVYDQTEQTSHTHP*PGSASPGYLWASGR Trigger: GCGACCAGAGGCCCATAGATATCCTGGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGAGGTCTGCTCCGTCTGGTCATAAACATCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223658.2 |
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CDS-3UTR CAA 90 bp | GCTGTAGCCCAGGACTGGAGATATTTGAGCCGCCCATCTGATTCTCTGGTCCTCCGCCAGACTCATCTCTaGCTCAGCTCGACTCAACAA | + |
Preference number: 5 (lower is better) Translates to: AVAQDWRYLSRPSDSLVLRQTHL*LSSTQQ Trigger: TTGTTGAGTCGAGCTGAGCAAGAGATGAGTCTGGCG...GAGGACCAGAGAATCAGATGGGCGGCTCAAATATCTCCAGTCCTGGGCTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CAA 90 bp | GTGGCCTTCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATCAGGACTGGAGATATTaGAGCCGCCCATCTGATTCC | + |
Preference number: 5 (lower is better) Translates to: VAFKAHCKVLCSDRSILDQDWRY*SRPSDS Trigger: GGAATCAGATGGGCGGCTCAAATATCTCCAGTCCTG...ATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGAAGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | AGCTGTTCCATGAGGAAGCCTGCGTGTCTTGAGGCGGACCCTCTCCCTTCACATACCCATAGCTGTTGGTaGTTCCTTTGGCAAGGAGGT | + |
Preference number: 5 (lower is better) Translates to: SCSMRKPACLEADPLPSHTHSCW*FLWQGG Trigger: ACCTCCTTGCCAAAGGAACAACCAACAGCTATGGGT...ATGTGAAGGGAGAGGGTCCGCCTCAAGACACGCAGGCTTCCTCATGGAACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | CCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACAGGGCTCCAAGCGGCTGTGCTaGTATTTGGTCATGCTGTGG | + |
Preference number: 5 (lower is better) Translates to: PTVRCSAQTGAFWILEQGSKRLC*YLVMLW Trigger: CCACAGCATGACCAAATACAAGCACAGCCGCTTGGA...GCCCTGTTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | ACATCCTTACGGACAAGGCTCTCAGGCTCCTCAAGCTCCATGCTCTGCTTAGCTGATATAGGGGTCGTGTaGTTTCAAGGCCGCCAGACT | + |
Preference number: 5 (lower is better) Translates to: TSLRTRLSGSSSSMLCLADIGVV*FQGRQT Trigger: AGTCTGGCGGCCTTGAAACAACACGACCCCTATATC...AGCTAAGCAGAGCATGGAGCTTGAGGAGCCTGAGAGCCTTGTCCGTAAGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | GATCAGCACTGGGGTGCTGACTTCAGGCTGAACTGTGTGGTGAGCGGCAGAATGTGCATGTTCAGTCGGTaGACAATGGTAAAGCCATGG | + |
Preference number: 5 (lower is better) Translates to: DQHWGADFRLNCVVSGRMCMFSR*TMVKPW Trigger: CCATGGCTTTACCATTGTCAACCGACTGAACATGCA...CATTCTGCCGCTCACCACACAGTTCAGCCTGAAGTCAGCACCCCAGTGCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CAA 90 bp | AGTGGAGATTTCTGCCTGGGTGTGGTCTTTACTGCTTGTATCATGGTGCTATTCTGGTCGCTGCAGCCATaGGCCTGGCTGGGACTCTGT | + |
Preference number: 5 (lower is better) Translates to: SGDFCLGVVFTACIMVLFWSLQP*AWLGLC Trigger: ACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCA...GAATAGCACCATGATACAAGCAGTAAAGACCACACCCAGGCAGAAATCTCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CAA 90 bp | CCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAACAGGGCACCCATAGCTGTTGGTaGTTCCTTTGGCAAGGAGGT | + |
Preference number: 5 (lower is better) Translates to: PTVRCSAQTGAFWILEQGTHSCW*FLWQGG Trigger: ACCTCCTTGCCAAAGGAACAACCAACAGCTATGGGT...GCCCTGTTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 90 bp | CATGGTTCCTTTTCCAAGCGGCTGTGCTTGTATTTGGTCATGCTGTaGGGTCAACCTGAGTTTCTGAAGCAGATCAACGCTTGGGAGGGC | + |
Preference number: 5 (lower is better) Translates to: HGSFSKRLCLYLVML*GQPEFLKQINAWEG Trigger: GCCCTCCCAAGCGTTGATCTGCTTCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAAGCACAGCCGCTTGGAAAAGGAACCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | ATCACTGAGAACGTCTCTAGGAAACATCCTTACGGACAAGGCTCTCAGGCTCCTTCCCACTGGTTGGCTTaGGGGCAGAAAGTGTACAGG | + |
Preference number: 5 (lower is better) Translates to: ITENVSRKHPYGQGSQAPSHWLA*GQKVYR Trigger: CCTGTACACTTTCTGCCCCAAAGCCAACCAGTGGGA...AGGAGCCTGAGAGCCTTGTCCGTAAGGATGTTTCCTAGAGACGTTCTCAGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | AGCTGTTCCATGAGGAAGCCTGCGTGTCTTGAGGCGGACCCTCTCCCTTCACATCTGTTGGTTGTTCCTTaGGCAAGGAGGTTCCAAATA | + |
Preference number: 5 (lower is better) Translates to: SCSMRKPACLEADPLPSHLLVVP*ARRFQI Trigger: TATTTGGAACCTCCTTGCCAAAGGAACAACCAACAG...ATGTGAAGGGAGAGGGTCCGCCTCAAGACACGCAGGCTTCCTCATGGAACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS GCA 90 bp | CTGGGTAACACCTTAGGCTGGGAAAATACTTCAGGATCCTGGTTTTaGTGCATAGACTGGAGGGTTGGAGCAAGCACCATGTTGCTCAGG | + |
Preference number: 5 (lower is better) Translates to: LGNTLGWENTSGSWF*CIDWRVGASTMLLR Trigger: CCTGAGCAACATGGTGCTTGCTCCAACCCTCCAGTCTATGCAGCAAAACCAGGATCCTGAAGTATTTTCCCAGCCTAAGGTGTTACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 90 bp | AATGGAGAGCCTGCAATCGGGATGGCACTGGGTAACACCTTAGGCTaGGAAAATACTTCAGGATCCTGGTTTTGCTGCATAGACTGGAGG | + |
Preference number: 5 (lower is better) Translates to: NGEPAIGMALGNTLG*ENTSGSWFCCIDWR Trigger: CCTCCAGTCTATGCAGCAAAACCAGGATCCTGAAGTATTTTCCCAGCCTAAGGTGTTACCCAGTGCCATCCCGATTGCAGGCTCTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | TGGAGATATTTGAGCCGCCCATCTGATTCTCTGGTCCTCATGCTTGTACAGCAATCCCACTGGTTGGCTTaGGGGCAGAAAGTGTACAGG | + |
Preference number: 5 (lower is better) Translates to: WRYLSRPSDSLVLMLVQQSHWLA*GQKVYR Trigger: CCTGTACACTTTCTGCCCCAAAGCCAACCAGTGGGA...TTGCTGTACAAGCATGAGGACCAGAGAATCAGATGGGCGGCTCAAATATCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS-3UTR CAA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGCTGTTGGTTGTTCCTTaGGCAAGGAGGTTCCAAATA | + |
Preference number: 5 (lower is better) Translates to: PGPHGNSPREWPSKPTVRLLVVP*ARRFQI Trigger: TATTTGGAACCTCCTTGCCAAAGGAACAACCAACAG...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | CCTGGTCCTCATGGAAACTCTCCTCGTGAGTGGCCTTCAAAGCCCACTGTAAGGTGTGGTCTTTACTGCTaGTATCATGGTGCTATTCCG | + |
Preference number: 5 (lower is better) Translates to: PGPHGNSPREWPSKPTVRCGLYC*YHGAIP Trigger: CGGAATAGCACCATGATACAAGCAGTAAAGACCACA...CCTTACAGTGGGCTTTGAAGGCCACTCACGAGGAGAGTTTCCATGAGGACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 90 bp | ATGGCACTGGGTAACACCTTAGGCTGGGAAAATACTTCAGGATCCTaGTTTTGCTGCATAGACTGGAGGGTTGGAGCAAGCACCATGTTG | + |
Preference number: 5 (lower is better) Translates to: MALGNTLGWENTSGS*FCCIDWRVGASTML Trigger: CAACATGGTGCTTGCTCCAACCCTCCAGTCTATGCAGCAAAACCAGGATCCTGAAGTATTTTCCCAGCCTAAGGTGTTACCCAGTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTTGGTCGCTGCAGCCATaGGCCTGGCTGGGACTCTGT | + |
Preference number: 5 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGWSLQP*AWLGLC Trigger: ACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCA...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | CACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTCAGGGGTGGCCAGTaGGCCAGCTGCCGAAGAAAA | + |
Preference number: 5 (lower is better) Translates to: HLEFHVALSVLQWQLRPLLRGGQ*ASCRRK Trigger: TTTTCTTCGGCAGCTGGCCAACTGGCCACCCCTGAG...TAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCGGAGCAAGCACCATGTaGCTCAGGGAGGCTGAGACT | + |
Preference number: 5 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGGASTM*LREAET Trigger: AGTCTCAGCCTCCCTGAGCAACATGGTGCTTGCTCC...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | TCAAAGCCCACTGTAAGGTGCTCTGCTCAGACCGGAGCATTCTGGATTCTTGAATTCAGGATCCTGGTTTaGCTGCATAGACTGGAGGGT | + |
Preference number: 5 (lower is better) Translates to: SKPTVRCSAQTGAFWILEFRILV*LHRLEG Trigger: ACCCTCCAGTCTATGCAGCAAAACCAGGATCCTGAA...TTCAAGAATCCAGAATGCTCCGGTCTGAGCAGAGCACCTTACAGTGGGCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | ACGTACAGCAACAACACGTGTCTTAAAGATTCACAGATAAAAGGGAAACACAACTGGTCGCTGCAGCCATaGGCCTGGCTGGGACTCTGT | + |
Preference number: 5 (lower is better) Translates to: TYSNNTCLKDSQIKGKHNWSLQP*AWLGLC Trigger: ACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCA...GTTGTGTTTCCCTTTTATCTGTGAATCTTTAAGACACGTGTTGTTGCTGTACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | CACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTAGTGGGAGTGTGTAGCTaGGGGGATGTTTGTCACCCG | + |
Preference number: 5 (lower is better) Translates to: HLEFHVALSVLQWQLRPLVGVCS*GDVCHP Trigger: CGGGTGACAAACATCCCCCAAGCTACACACTCCCAC...TAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | TGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATTTTAAGGGAGCAAGCACCATGTaGCTCAGGGAGGCTGAGACT | + |
Preference number: 5 (lower is better) Translates to: WPSFLEVMIWNFWLLNFKGASTM*LREAET Trigger: AGTCTCAGCCTCCCTGAGCAACATGGTGCTTGCTCC...CTTAAAATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CAA 90 bp | ATCACTGAGAACGTCTCTAGGAAACATCCTTACGGACAAGGCTCTCAGGCTCCTAGGTTGTGGTTGTCTTaGTTCTTGGTCAGAACCTGC | + |
Preference number: 5 (lower is better) Translates to: ITENVSRKHPYGQGSQAPRLWLS*FLVRTC Trigger: GCAGGTTCTGACCAAGAACAAAGACAACCACAACCT...AGGAGCCTGAGAGCCTTGTCCGTAAGGATGTTTCCTAGAGACGTTCTCAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCGCCAGACTCATCTCTaGCTCAGCTCGACTCAACAA | + |
Preference number: 5 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGRQTHL*LSSTQQ Trigger: TTGTTGAGTCGAGCTGAGCAAGAGATGAGTCTGGCG...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | CTTCAAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTGAAGTCAAATCGGCTCTCATACTCATCCTaGGCCCGGCTCAGCATCTCC | + |
Preference number: 5 (lower is better) Translates to: LQSDLYCIAAFERVKSNRLSYSS*ARLSIS Trigger: GGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGAG...CCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | GGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTTCAGGATCCTGGTTTaGCTGCATAGACTGGAGGGT | + |
Preference number: 5 (lower is better) Translates to: GTLSFMLHYQCYNGSYGLFRILV*LHRLEG Trigger: ACCCTCCAGTCTATGCAGCAAAACCAGGATCCTGAA...GAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCATACTGCTGTGGTGGTaGCAGGAACCAATGGAGAGC | + |
Preference number: 5 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGILLWW*QEPMES Trigger: GCTCTCCATTGGTTCCTGCAACCACCACAGCAGTAT...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | TTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTACGGAACACAAAGACGCCAGACTCATCTCTaGCTCAGCTCGACTCAACAA | + |
Preference number: 5 (lower is better) Translates to: LHYQCYNGSYGLYYGTQRRQTHL*LSSTQQ Trigger: TTGTTGAGTCGAGCTGAGCAAGAGATGAGTCTGGCG...TCTTTGTGTTCCGTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | CTTCAAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTGAAGTCAAATCGGTCCCACTGGTTGGCTTaGGGGCAGAAAGTGTACAGG | + |
Preference number: 5 (lower is better) Translates to: LQSDLYCIAAFERVKSNRSHWLA*GQKVYR Trigger: CCTGTACACTTTCTGCCCCAAAGCCAACCAGTGGGA...CCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | TGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATTTTAAGCGGCTGTGCTTGTATTaGGTCATGCTGTGGGGTCAA | + |
Preference number: 5 (lower is better) Translates to: WPSFLEVMIWNFWLLNFKRLCLY*VMLWGQ Trigger: TTGACCCCACAGCATGACCAAATACAAGCACAGCCG...CTTAAAATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS-3UTR CAA 90 bp | TTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTACGATATAGGGGTCGTGTaGTTTCAAGGCCGCCAGACT | + |
Preference number: 5 (lower is better) Translates to: LSFMLHYQCYNGSYGLYYDIGVV*FQGRQT Trigger: AGTCTGGCGGCCTTGAAACAACACGACCCCTATATC...GTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCTGCATGTTCAGTCGGTaGACAATGGTAAAGCCATGG | + |
Preference number: 5 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGCMFSR*TMVKPW Trigger: CCATGGCTTTACCATTGTCAACCGACTGAACATGCA...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | TTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTACTACCAGGACTGGAGATATTaGAGCCGCCCATCTGATTCC | + |
Preference number: 5 (lower is better) Translates to: LSFMLHYQCYNGSYGLYYQDWRY*SRPSDS Trigger: GGAATCAGATGGGCGGCTCAAATATCTCCAGTCCTG...GTAGTAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | ACGTCACTCAACACAATGGTCTCTTGTTGTTTTGTCAAACAAAGGTTTGCTGGTCGGCTGTGCTTGTATTaGGTCATGCTGTGGGGTCAA | + |
Preference number: 5 (lower is better) Translates to: TSLNTMVSCCFVKQRFAGRLCLY*VMLWGQ Trigger: TTGACCCCACAGCATGACCAAATACAAGCACAGCCG...ACCAGCAAACCTTTGTTTGACAAAACAACAAGAGACCATTGTGTTGAGTGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | CTTCAAAGTGATCTGTATTGCATTGCAGCGTTTGAAAGAGTGAAGTCAAATCGGATACTGCTGTGGTGGTaGCAGGAACCAATGGAGAGC | + |
Preference number: 5 (lower is better) Translates to: LQSDLYCIAAFERVKSNRILLWW*QEPMES Trigger: GCTCTCCATTGGTTCCTGCAACCACCACAGCAGTAT...CCGATTTGACTTCACTCTTTCAAACGCTGCAATGCAATACAGATCACTTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | CACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCCTCTATGCATGTTCAGTCGGTaGACAATGGTAAAGCCATGG | + |
Preference number: 5 (lower is better) Translates to: HLEFHVALSVLQWQLRPLCMFSR*TMVKPW Trigger: CCATGGCTTTACCATTGTCAACCGACTGAACATGCA...TAGAGGCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | GTAGGCACCTTGAGTTTCATGTTGCATTATCAGTGTTACAATGGCAGTTACGGCTGTGGTCTTTACTGCTaGTATCATGGTGCTATTCCG | + |
Preference number: 5 (lower is better) Translates to: VGTLSFMLHYQCYNGSYGCGLYC*YHGAIP Trigger: CGGAATAGCACCATGATACAAGCAGTAAAGACCACA...GCCGTAACTGCCATTGTAACACTGATAATGCAACATGAAACTCAAGGTGCCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS-3UTR CAA 90 bp | TGGCCTAGCTTCCTAGAAGTCATGATCTGGAACTTCTGGCTTCTGAATTTTAAGAGGTTGTGGTTGTCTTaGTTCTTGGTCAGAACCTGC | + |
Preference number: 5 (lower is better) Translates to: WPSFLEVMIWNFWLLNFKRLWLS*FLVRTC Trigger: GCAGGTTCTGACCAAGAACAAAGACAACCACAACCT...CTTAAAATTCAGAAGCCAGAAGTTCCAGATCATGACTTCTAGGAAGCTAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022535.9 |
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CDS TCA 90 bp | CTTTGTTCTTGGTCAGAACCTGCAAGTAAACTGCATGAAGCGTACTaGGGAAGCTGGAGTCATTCTTTATTAGGTGTATCAGTGTGTCCT | + |
Preference number: 5 (lower is better) Translates to: LCSWSEPASKLHEAY*GSWSHSLLGVSVCP Trigger: AGGACACACTGATACACCTAATAAAGAATGACTCCAGCTTCCTCAGTACGCTTCATGCAGTTTACTTGCAGGTTCTGACCAAGAACAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 90 bp | CAGAAGAAATGGTTCATGGAGCTGAAATTCCAAATCTTTATTCACTaGCTCAACCAGATTGTGCATGTTCAGTCGGTTGACAATGGTAAA | + |
Preference number: 5 (lower is better) Translates to: QKKWFMELKFQIFIH*LNQIVHVQSVDNGK Trigger: TTTACCATTGTCAACCGACTGAACATGCACAATCTGGTTGAGCCAGTGAATAAAGATTTGGAATTTCAGCTCCATGAACCATTTCTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CAA 90 bp | GCCGCCAGACTCATCTCTTGCTCAGCTCGACTCAACAACTCCATCTaGGATCTCAGAGCCGAGCCCCTCCGGCGGGGGCGGACTGTGGAA | + |
Preference number: 6 (lower is better) Translates to: AARLISCSARLNNSI*DLRAEPLRRGRTVE Trigger: TTCCACAGTCCGCCCCCGCCGGAGGGGCTCGGCTCTGAGATCCAAGATGGAGTTGTTGAGTCGAGCTGAGCAAGAGATGAGTCTGGCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 72 bp | CATCCTTGGCCCGGCTCAGCATCTCCAGGATATCTATaGGCCTCTGGTCGCTGCAGCCATTGGCCTGGCTGG | + |
Preference number: 6 (lower is better) Translates to: HPWPGSASPGYL*ASGRCSHWPGW Trigger: CCAGCCAGGCCAATGGCTGCAGCGACCAGAGGCCCATAGATATCCTGGAGATGCTGAGCCGGGCCAAGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CAA 72 bp | CTCATCTCTTGCTCAGCTCGACTCAACAACTCCATCTaGGATCTCAGAGCCGAGCCCCTCCGGCGGGGGCGG | + |
Preference number: 6 (lower is better) Translates to: LISCSARLNNSI*DLRAEPLRRGR Trigger: CCGCCCCCGCCGGAGGGGCTCGGCTCTGAGATCCAAGATGGAGTTGTTGAGTCGAGCTGAGCAAGAGATGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 72 bp | GCCTGGCTGGGACTCTGTTTATCTCGAGCAGCCTGCTaGGATCGCCGTGTCTCCTCTTCTACCACATCAGCC | + |
Preference number: 6 (lower is better) Translates to: AWLGLCLSRAAC*DRRVSSSTTSA Trigger: GGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CAA 90 bp | CTCAGCATCTCCAGGATATCTATGGGCCTCTGGTCGCTGCAGCCATaGGCCTGGCTGGGACTCTGTTTATCTCGAGCAGCCTGCTGGGAT | + |
Preference number: 6 (lower is better) Translates to: LSISRISMGLWSLQP*AWLGLCLSRAACWD Trigger: ATCCCAGCAGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCAGAGGCCCATAGATATCCTGGAGATGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 72 bp | ATATCTATGGGCCTCTGGTCGCTGCAGCCATTGGCCTaGCTGGGACTCTGTTTATCTCGAGCAGCCTGCTGG | + |
Preference number: 6 (lower is better) Translates to: ISMGLWSLQPLA*LGLCLSRAACW Trigger: CCAGCAGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCAGAGGCCCATAGATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 72 bp | CCAGGATATCTATGGGCCTCTGGTCGCTGCAGCCATTaGCCTGGCTGGGACTCTGTTTATCTCGAGCAGCCT | + |
Preference number: 6 (lower is better) Translates to: PGYLWASGRCSH*PGWDSVYLEQP Trigger: AGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCAGAGGCCCATAGATATCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 72 bp | GAAGAAGGCTCTATGAAGCTCTCAGGGGTGGCCAGTTaGCCAGCTGCCGAAGAAAAGCTGGGCGCCATGGTT | + |
Preference number: 6 (lower is better) Translates to: EEGSMKLSGVAS*PAAEEKLGAMV Trigger: AACCATGGCGCCCAGCTTTTCTTCGGCAGCTGGCCAACTGGCCACCCCTGAGAGCTTCATAGAGCCTTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 |
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CDS CAA 90 bp | GGAACACACTGGGGGACAGCAGGACTGAAGATACTGCTGTGGTGGTaGCAGGAACCAATGGAGAGCCTGCAATCGGGATGGCACTGGGTA | + |
Preference number: 6 (lower is better) Translates to: GTHWGTAGLKILLWW*QEPMESLQSGWHWV Trigger: TACCCAGTGCCATCCCGATTGCAGGCTCTCCATTGGTTCCTGCAACCACCACAGCAGTATCTTCAGTCCTGCTGTCCCCCAGTGTGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS GCA 72 bp | TTGGCCTGGCTGGGACTCTGTTTATCTCGAGCAGCCTaGTGGGATCGCCGTGTCTCCTCTTCTACCACATCA | + |
Preference number: 6 (lower is better) Translates to: LAWLGLCLSRAA*WDRRVSSSTTS Trigger: TGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAGGCTGCTCGAGATAAACAGAGTCCCAGCCAGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 72 bp | CACTGGGGGACAGCAGGACTGAAGATACTGCTGTGGTaGTTGCAGGAACCAATGGAGAGCCTGCAATCGGGA | + |
Preference number: 6 (lower is better) Translates to: HWGTAGLKILLW*LQEPMESLQSG Trigger: TCCCGATTGCAGGCTCTCCATTGGTTCCTGCAACCACCACAGCAGTATCTTCAGTCCTGCTGTCCCCCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 72 bp | TTCCTCTCTAGGTCTGCGGCCCTGGGAACCGTTTGCTaGAACACACTGGGGGACAGCAGGACTGAAGATACT | + |
Preference number: 6 (lower is better) Translates to: FLSRSAALGTVC*NTLGDSRTEDT Trigger: AGTATCTTCAGTCCTGCTGTCCCCCAGTGTGTTCCAGCAAACGGTTCCCAGGGCCGCAGACCTAGAGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CAA 72 bp | GTCCCTTCTATATCAGTCTTCTCCCACTGGTTGGCTTaGGGGCAGAAAGTGTACAGGGCGACCTGGCCCGTG | + |
Preference number: 6 (lower is better) Translates to: VPSISVFSHWLA*GQKVYRATWPV Trigger: CACGGGCCAGGTCGCCCTGTACACTTTCTGCCCCAAAGCCAACCAGTGGGAGAAGACTGATATAGAAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS CCA 72 bp | CCAGTTGGCCAGCTGCCGAAGAAAAGCTGGGCGCCATaGTTCCTTTTCCAAGCGGCTGTGCTTGTATTTGGT | + |
Preference number: 6 (lower is better) Translates to: PVGQLPKKSWAP*FLFQAAVLVFG Trigger: ACCAAATACAAGCACAGCCGCTTGGAAAAGGAACCATGGCGCCCAGCTTTTCTTCGGCAGCTGGCCAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 |
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CDS CCA 72 bp | ACACACTGGGGGACAGCAGGACTGAAGATACTGCTGTaGTGGTTGCAGGAACCAATGGAGAGCCTGCAATCG | + |
Preference number: 6 (lower is better) Translates to: THWGTAGLKILL*WLQEPMESLQS Trigger: CGATTGCAGGCTCTCCATTGGTTCCTGCAACCACCACAGCAGTATCTTCAGTCCTGCTGTCCCCCAGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 72 bp | TATGACCAGACGGAGCAGACCTCTCATACTCATCCTTaGCCCGGCTCAGCATCTCCAGGATATCTATGGGCC | + |
Preference number: 6 (lower is better) Translates to: YDQTEQTSHTHP*PGSASPGYLWA Trigger: GGCCCATAGATATCCTGGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGAGGTCTGCTCCGTCTGGTCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223658.2 |
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CDS TCA 72 bp | AACCGTTTGCTGGAACACACTGGGGGACAGCAGGACTaGAGATACTGCTGTGGTGGTTGCAGGAACCAATGG | + |
Preference number: 6 (lower is better) Translates to: NRLLEHTGGQQD*RYCCGGCRNQW Trigger: CCATTGGTTCCTGCAACCACCACAGCAGTATCTTCAGTCCTGCTGTCCCCCAGTGTGTTCCAGCAAACGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS TCA 72 bp | GCTGTGCTTGTATTTGGTCATGCTGTGGGGTCAACCTaGGTTTCTGAAGCAGATCAACGCTTGGGAGGGCTG | + |
Preference number: 6 (lower is better) Translates to: AVLVFGHAVGST*VSEADQRLGGL Trigger: CAGCCCTCCCAAGCGTTGATCTGCTTCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAAGCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 |
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CDS GCA 72 bp | GGGTCGTGTTGTTTCAAGGCCGCCAGACTCATCTCTTaGTCAGCTCGACTCAACAACTCCATCTTGGATCTC | + |
Preference number: 6 (lower is better) Translates to: GSCCFKAARLIS*SARLNNSILDL Trigger: GAGATCCAAGATGGAGTTGTTGAGTCGAGCTGAGCAAGAGATGAGTCTGGCGGCCTTGAAACAACACGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CAA 72 bp | GGGGTCGTGTTGTTTCAAGGCCGCCAGACTCATCTCTaGCTCAGCTCGACTCAACAACTCCATCTTGGATCT | + |
Preference number: 6 (lower is better) Translates to: GVVLFQGRQTHL*LSSTQQLHLGS Trigger: AGATCCAAGATGGAGTTGTTGAGTCGAGCTGAGCAAGAGATGAGTCTGGCGGCCTTGAAACAACACGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CAA 90 bp | GGTGATATAGGGGTCGTGTTGTTTCAAGGCCGCCAGACTCATCTCTaGCTCAGCTCGACTCAACAACTCCATCTTGGATCTCAGAGCCGA | + |
Preference number: 6 (lower is better) Translates to: GDIGVVLFQGRQTHL*LSSTQQLHLGSQSR Trigger: TCGGCTCTGAGATCCAAGATGGAGTTGTTGAGTCGAGCTGAGCAAGAGATGAGTCTGGCGGCCTTGAAACAACACGACCCCTATATCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CAA 90 bp | AAAGCTGGGCGCCATGGTTCCTTTTCCAAGCGGCTGTGCTTGTATTaGGTCATGCTGTGGGGTCAACCTGAGTTTCTGAAGCAGATCAAC | + |
Preference number: 6 (lower is better) Translates to: KAGRHGSFSKRLCLY*VMLWGQPEFLKQIN Trigger: GTTGATCTGCTTCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAAGCACAGCCGCTTGGAAAAGGAACCATGGCGCCCAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 |
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CDS CCA 72 bp | ATTTCACTAGAGGAGAAACCCTCTCATACTCATCCTTaGCCCGGCTCAGCATCTCCAGGATATCTATGGGCC | + |
Preference number: 6 (lower is better) Translates to: ISLEEKPSHTHP*PGSASPGYLWA Trigger: GGCCCATAGATATCCTGGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGAGGGTTTCTCCTCTAGTGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS CAA 72 bp | CATTTCACTAGAGGAGAAACCCTCTCATACTCATCCTaGGCCCGGCTCAGCATCTCCAGGATATCTATGGGC | + |
Preference number: 6 (lower is better) Translates to: HFTRGETLSYSS*ARLSISRISMG Trigger: GCCCATAGATATCCTGGAGATGCTGAGCCGGGCCAAGGATGAGTATGAGAGGGTTTCTCCTCTAGTGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225286.2 |
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CDS CCA 72 bp | GGTAACACCTTAGGCTGGGAAAATACTTCAGGATCCTaGTTTTGCTGCATAGACTGGAGGGTTGGAGCAAGC | + |
Preference number: 6 (lower is better) Translates to: GNTLGWENTSGS*FCCIDWRVGAS Trigger: GCTTGCTCCAACCCTCCAGTCTATGCAGCAAAACCAGGATCCTGAAGTATTTTCCCAGCCTAAGGTGTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CCA 72 bp | CCTGCAATCGGGATGGCACTGGGTAACACCTTAGGCTaGGAAAATACTTCAGGATCCTGGTTTTGCTGCATA | + |
Preference number: 6 (lower is better) Translates to: PAIGMALGNTLG*ENTSGSWFCCI Trigger: TATGCAGCAAAACCAGGATCCTGAAGTATTTTCCCAGCCTAAGGTGTTACCCAGTGCCATCCCGATTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS CAA 72 bp | CACCTTAGGCTGGGAAAATACTTCAGGATCCTGGTTTaGCTGCATAGACTGGAGGGTTGGAGCAAGCACCAT | + |
Preference number: 6 (lower is better) Translates to: HLRLGKYFRILV*LHRLEGWSKHH Trigger: ATGGTGCTTGCTCCAACCCTCCAGTCTATGCAGCAAAACCAGGATCCTGAAGTATTTTCCCAGCCTAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS GCA 72 bp | TTAGGCTGGGAAAATACTTCAGGATCCTGGTTTTGCTaGATAGACTGGAGGGTTGGAGCAAGCACCATGTTG | + |
Preference number: 6 (lower is better) Translates to: LGWENTSGSWFC*IDWRVGASTML Trigger: CAACATGGTGCTTGCTCCAACCCTCCAGTCTATGCAGCAAAACCAGGATCCTGAAGTATTTTCCCAGCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS GCA 72 bp | CCGTGTCTCCTCTTCTACCACATCAGCCATGAGTTTTaGTATGCGATGACAGTCATTCTTGTCATAGAACCA | + |
Preference number: 6 (lower is better) Translates to: PCLLFYHISHEF*YAMTVILVIEP Trigger: TGGTTCTATGACAAGAATGACTGTCATCGCATAGCAAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS TCA 72 bp | TGGTCAGAACCTGCAAGTAAACTGCATGAAGCGTACTaGGGAAGCTGGAGTCATTCTTTATTAGGTGTATCA | + |
Preference number: 6 (lower is better) Translates to: WSEPASKLHEAY*GSWSHSLLGVS Trigger: TGATACACCTAATAAAGAATGACTCCAGCTTCCTCAGTACGCTTCATGCAGTTTACTTGCAGGTTCTGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022535.9 ENSMUST00000225196.2 |
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CDS GCA 72 bp | AATTCCAAATCTTTATTCACTGGCTCAACCAGATTGTaGATGTTCAGTCGGTTGACAATGGTAAAGCCATGG | + |
Preference number: 6 (lower is better) Translates to: NSKSLFTGSTRL*MFSRLTMVKPW Trigger: CCATGGCTTTACCATTGTCAACCGACTGAACATGCACAATCTGGTTGAGCCAGTGAATAAAGATTTGGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |
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CDS TCA 72 bp | CTTGCATTTCTATACAGAAGAAATGGTTCATGGAGCTaGAATTCCAAATCTTTATTCACTGGCTCAACCAGA | + |
Preference number: 6 (lower is better) Translates to: LAFLYRRNGSWS*NSKSLFTGSTR Trigger: TCTGGTTGAGCCAGTGAATAAAGATTTGGAATTTCAGCTCCATGAACCATTTCTTCTGTATAGAAATGCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022535.9 ENSMUST00000223658.2 ENSMUST00000225196.2 ENSMUST00000225286.2 |