Pregenerated sensors for DCLRE1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026648Ensembl transcript IDs: ENSMUST00000061852.12, ENSMUST00000100463.10, ENSMUST00000102988.10, ENSMUST00000115066.8, ENSMUST00000129657.2
Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCCTGCGCTGTGAGTTTTGAGCTGAAGCAGCTCCCGACTCTCTTGTaGACAGTAAAGCTTCCCAGACAGTTCACCGCACGCCTCTTATCT | + |
Preference number: 1 (lower is better) Translates to: SCAVSFELKQLPTLL*TVKLPRQFTARLLS Trigger: AGATAAGAGGCGTGCGGTGAACTGTCTGGGAAGCTTTACTGTTCACAAGAGAGTCGGGAGCTGCTTCAGCTCAAAACTCACAGCGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR TCA 90 bp | AGTTGCTATGTTTCACTTGAGCACTGTTGGAGTCTTCAGCTGAACTaGAGCTGTGGTCATAAGGACAGCAGCGCGGGTAATGTGGTGACA | + |
Preference number: 1 (lower is better) Translates to: SCYVSLEHCWSLQLN*SCGHKDSSAGNVVT Trigger: TGTCACCACATTACCCGCGCTGCTGTCCTTATGACCACAGCTTCAGTTCAGCTGAAGACTCCAACAGTGCTCAAGTGAAACATAGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTaGCGTCCTCTTCTGGTGCATCTGAAGACAGCTACAGTGTACTTA | + |
Preference number: 1 (lower is better) Translates to: IPATTWWLTTIFNEI*RPLLVHLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAGAGGACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR GCA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTaGCCAGGACTTTTATGTATAGCATTGTATTGCAACATCGAAAGG | + |
Preference number: 1 (lower is better) Translates to: SVSTLQATYIHSYGY*PGLLCIALYCNIER Trigger: CCTTTCGATGTTGCAATACAATGCTATACATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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3UTR CCA 90 bp | CTGGTGTTGCTTTCAGTACAAGAATGCAGGCAAGTCTTTGGGTCATaGAGCAAACTAACATTGAAGATGAAAGAAATCAGTACGGAGGCG | + |
Preference number: 1 (lower is better) Translates to: LVLLSVQECRQVFGS*SKLTLKMKEISTEA Trigger: CGCCTCCGTACTGATTTCTTTCATCTTCAATGTTAGTTTGCTCCATGACCCAAAGACTTGCCTGCATTCTTGTACTGAAAGCAACACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR CCA 90 bp | GTATATTCACTCGGTATGCTACCTGACAGTCACTTAGCAAGCCTCTaGATTATCAGGCCAACCATCAGAGAGTTACATGTGGTCAAGTAT | + |
Preference number: 1 (lower is better) Translates to: VYSLGMLPDSHLASL*IIRPTIRELHVVKY Trigger: ATACTTGACCACATGTAACTCTCTGATGGTTGGCCTGATAATCCAGAGGCTTGCTAAGTGACTGTCAGGTAGCATACCGAGTGAATATAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR CCA 90 bp | ATATATATGTATAGAACAAAACCCTGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGCTTTTCTGAAGGTCCTGAGTTCAAAT | + |
Preference number: 1 (lower is better) Translates to: IYMYRTKPWAGEMAQ*LRALTAFLKVLSSN Trigger: ATTTGAACTCAGGACCTTCAGAAAAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCAGGGTTTTGTTCTATACATATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR CCA 90 bp | TCTAACAAGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATaGATATTGCCCAGGACTTTTATGTATAGCATTGTATTGCAACAT | + |
Preference number: 1 (lower is better) Translates to: SNKCVYPPGHIHPQL*ILPRTFMYSIVLQH Trigger: ATGTTGCAATACAATGCTATACATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACTTGTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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3UTR TCA 90 bp | AAGGAGCACTTAGAGATAAGATGGTTCAGATTAGTGCTGCTTGCATaGTTCTTTTCCTCAACTGAAGGACAATCACTTACACAGCCATTC | + |
Preference number: 1 (lower is better) Translates to: KEHLEIRWFRLVLLA*FFSSTEGQSLTQPF Trigger: GAATGGCTGTGTAAGTGATTGTCCTTCAGTTGAGGAAAAGAATCATGCAAGCAGCACTAATCTGAACCATCTTATCTCTAAGTGCTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR TCA 90 bp | TTGATCTTATTATATAGATGTGTCACTCTGCAGATTTCTTGTGGTTaGTCTAACAAGTGTGTCTACCCTCCAGGCCACATACATCCACAG | + |
Preference number: 1 (lower is better) Translates to: LILLYRCVTLQISCG*SNKCVYPPGHIHPQ Trigger: CTGTGGATGTATGTGGCCTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACACATCTATATAATAAGATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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3UTR-3UTR TCA 90 bp | TGGGCCTGGATGTCCTCCTGCGCTGTGAGTTTTGAGCTGAAGCAGCTCCCGACTACTCGGTATGCTACCTaGCAGTCACTTAGCAAGCCT | + |
Preference number: 2 (lower is better) Translates to: WAWMSSCAVSFELKQLPTTRYAT*QSLSKP Trigger: AGGCTTGCTAAGTGACTGTCAGGTAGCATACCGAGT...AGTCGGGAGCTGCTTCAGCTCAAAACTCACAGCGCAGGAGGACATCCAGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR CCA 90 bp | GTTTTGGAGAACACAGGGTCACCTGTGGTCCTATGTGAGAGGCTGAGGGAGAAATATAGAACAAAACCCTaGGCTGGAGAGATGGCTCAG | + |
Preference number: 2 (lower is better) Translates to: VLENTGSPVVLCERLREKYRTKP*AGEMAQ Trigger: CTGAGCCATCTCTCCAGCCCAGGGTTTTGTTCTATA...TTTCTCCCTCAGCCTCTCACATAGGACCACAGGTGACCCTGTGTTCTCCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR TCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCACTACCTCCCAAGTGCTaGGATTCAAGGCATATGCCA | + |
Preference number: 2 (lower is better) Translates to: QQNEFRIAQGVHRETLSPLPPKC*DSRHMP Trigger: TGGCATATGCCTTGAATCTCAGCACTTGGGAGGTAG...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR TCA 90 bp | GTTTTGGAGAACACAGGGTCACCTGTGGTCCTATGTGAGAGGCTGAGGGAGAAAGTGTGTGAATCACAGTaGAATGTAAGAGACCGTCAG | + |
Preference number: 2 (lower is better) Translates to: VLENTGSPVVLCERLREKVCESQ*NVRDRQ Trigger: CTGACGGTCTCTTACATTTCACTGTGATTCACACAC...TTTCTCCCTCAGCCTCTCACATAGGACCACAGGTGACCCTGTGTTCTCCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR CCA 90 bp | GGTCATAAGGACAGCAGCGCGGGTAATGTGGTGACAGGGATGGGCCTGGATGTCACAAAACTATTTCCTTaGGAGTTAACCAACATTGAC | + |
Preference number: 2 (lower is better) Translates to: GHKDSSAGNVVTGMGLDVTKLFP*ELTNID Trigger: GTCAATGTTGGTTAACTCCCAAGGAAATAGTTTTGT...GACATCCAGGCCCATCCCTGTCACCACATTACCCGCGCTGCTGTCCTTATGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR CCA 90 bp | GTTTTGGAGAACACAGGGTCACCTGTGGTCCTATGTGAGAGGCTGAGGGAGAAAATGCAGGCAAGTCTTTaGGTCATGGAGCAAACTAAC | + |
Preference number: 2 (lower is better) Translates to: VLENTGSPVVLCERLREKMQASL*VMEQTN Trigger: GTTAGTTTGCTCCATGACCCAAAGACTTGCCTGCAT...TTTCTCCCTCAGCCTCTCACATAGGACCACAGGTGACCCTGTGTTCTCCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR CCA 90 bp | GTTTTGGAGAACACAGGGTCACCTGTGGTCCTATGTGAGAGGCTGAGGGAGAAACTGATGAGTTCACAGTaGATGCAGCTCGATATGGAA | + |
Preference number: 2 (lower is better) Translates to: VLENTGSPVVLCERLREKLMSSQ*MQLDME Trigger: TTCCATATCGAGCTGCATCCACTGTGAACTCATCAG...TTTCTCCCTCAGCCTCTCACATAGGACCACAGGTGACCCTGTGTTCTCCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR TCA 90 bp | GTTTTGGAGAACACAGGGTCACCTGTGGTCCTATGTGAGAGGCTGAGGGAGAAATTAGTGCTGCTTGCATaGTTCTTTTCCTCAACTGAA | + |
Preference number: 2 (lower is better) Translates to: VLENTGSPVVLCERLREKLVLLA*FFSSTE Trigger: TTCAGTTGAGGAAAAGAATCATGCAAGCAGCACTAA...TTTCTCCCTCAGCCTCTCACATAGGACCACAGGTGACCCTGTGTTCTCCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR CCA 90 bp | GTTTTGGAGAACACAGGGTCACCTGTGGTCCTATGTGAGAGGCTGAGGGAGAAAGGGCTTCTGTTAAATTaGGGTATTTCCGCTGTAATA | + |
Preference number: 2 (lower is better) Translates to: VLENTGSPVVLCERLREKGLLLN*GISAVI Trigger: TATTACAGCGGAAATACCCCAATTTAACAGAAGCCC...TTTCTCCCTCAGCCTCTCACATAGGACCACAGGTGACCCTGTGTTCTCCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR TCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCTCATGGCAGGCATTCTaGCTAGTGCATACCATCTTT | + |
Preference number: 2 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVSWQAF*LVHTIF Trigger: AAAGATGGTATGCACTAGTCAGAATGCCTGCCATGA...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR GCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCACTTTCAGTACAAGAATaGAGGCAAGTCTTTGGGTCA | + |
Preference number: 2 (lower is better) Translates to: QQNEFRIAQGVHRETLSPLSVQE*RQVFGS Trigger: TGACCCAAAGACTTGCCTGCATTCTTGTACTGAAAG...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR CCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCGTTAACAGATGTATATaGTTCATGCAAGGCGGGCAC | + |
Preference number: 2 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVVNRCI*FMQGGH Trigger: GTGCCCGCCTTGCATGAACCATATACATCTGTTAAC...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR TCA 90 bp | CTTACCCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAACTGGTCTCAACAGAATaGGTTCAGGATAGCACAAGG | + |
Preference number: 2 (lower is better) Translates to: LTHNLLSTVSLAYLALVQLVSTE*VQDSTR Trigger: CCTTGTGCTATCCTGAACTCATTCTGTTGAGACCAG...TTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGGGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR TCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACAGGTCTCTATGGGTTTaGCACCAGCCTGGTCTCAAC | + |
Preference number: 2 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNRSLWV*HQPGLN Trigger: GTTGAGACCAGGCTGGTGTCAAACCCATAGAGACCT...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR CCA 90 bp | CTTACCCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAATCCCAGCAACCACATaGTGGCTCACAACCATCTTT | + |
Preference number: 2 (lower is better) Translates to: LTHNLLSTVSLAYLALVQIPATT*WLTTIF Trigger: AAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT...TTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGGGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR TCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTCTACCTCCCAAGTGCTaGGATTCAAGGCATATGCCA | + |
Preference number: 2 (lower is better) Translates to: STEADQQNKLCVERIKIFLPPKC*DSRHMP Trigger: TGGCATATGCCTTGAATCTCAGCACTTGGGAGGTAG...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR TCA 90 bp | CTTACCCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAGCCAAGATGTTTCCTTaGAGCCACAAGGTGAAAGTA | + |
Preference number: 2 (lower is better) Translates to: LTHNLLSTVSLAYLALVQAKMFP*SHKVKV Trigger: TACTTTCACCTTGTGGCTTCAAGGAAACATCTTGGC...TTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGGGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR CAA 90 bp | GTGGTCTTCTATTCATCTCTGTCCTGCATAGCAGAGGTGGAGAGCTaGCACAGTCTGATTATAATGAAGTACCATATTTCAACTTACCTC | + |
Preference number: 2 (lower is better) Translates to: VVFYSSLSCIAEVES*HSLIIMKYHISTYL Trigger: GAGGTAAGTTGAAATATGGTACTTCATTATAATCAGACTGTGCAAGCTCTCCACCTCTGCTATGCAGGACAGAGATGAATAGAAGACCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR TCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGTCATGGCAGGCATTCTaGCTAGTGCATACCATCTTT | + |
Preference number: 2 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRSWQAF*LVHTIF Trigger: AAAGATGGTATGCACTAGTCAGAATGCCTGCCATGA...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR GCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCCTTGTTACAGTTTCTTaGACGTGTGTAGTGTTATTG | + |
Preference number: 2 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVLVTVS*TCVVLL Trigger: CAATAACACTACACACGTGCAAGAAACTGTAACAAG...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR GCA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGCACAGCTATGGATATTaGCCAGGACTTTTATGTATA | + |
Preference number: 2 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQHSYGY*PGLLCI Trigger: TATACATAAAAGTCCTGGGCAATATCCATAGCTGTG...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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3UTR-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAGTGGAAGCAACATATTaGATATCTGACTTCTTGTAT | + |
Preference number: 2 (lower is better) Translates to: QQNEFRIAQGVHRETLSPVEATY*ISDFLY Trigger: ATACAAGAAGTCAGATATCCAATATGTTGCTTCCAC...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR TCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACTCATGGCAGGCATTCTaGCTAGTGCATACCATCTTT | + |
Preference number: 2 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNSWQAF*LVHTIF Trigger: AAAGATGGTATGCACTAGTCAGAATGCCTGCCATGA...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR GCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGCTTTCAGTACAAGAATaGAGGCAAGTCTTTGGGTCA | + |
Preference number: 2 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRLSVQE*RQVFGS Trigger: TGACCCAAAGACTTGCCTGCATTCTTGTACTGAAAG...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR CCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACATGCAGGCAAGTCTTTaGGTCATGGAGCAAACTAAC | + |
Preference number: 2 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNMQASL*VMEQTN Trigger: GTTAGTTTGCTCCATGACCCAAAGACTTGCCTGCAT...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR CCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCGTGGAAGCAACATATTaGATATCTGACTTCTTGTAT | + |
Preference number: 2 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVVEATY*ISDFLY Trigger: ATACAAGAAGTCAGATATCCAATATGTTGCTTCCAC...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR CAA 90 bp | TACATCCACAGCTATGGATATTGCCCAGGACTTTTATGTATAGCATaGTATTGCAACATCGAAAGGCTGGACATCTTTGCTAGAATGAGA | + |
Preference number: 2 (lower is better) Translates to: YIHSYGYCPGLLCIA*YCNIERLDIFARMR Trigger: TCTCATTCTAGCAAAGATGTCCAGCCTTTCGATGTTGCAATACAATGCTATACATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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3UTR-3UTR GCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACACACTGTGCTTTTCCTaGTGTGACCATTTCACATCA | + |
Preference number: 2 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNTLCFS*CDHFTS Trigger: TGATGTGAAATGGTCACAGCAGGAAAAGCACAGTGT...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR GCA 90 bp | CCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAAAATACATTCCAGCACTTGCTaGAGATACAACATTCTTACA | + |
Preference number: 2 (lower is better) Translates to: PQFTFHSFTCLLSSGPKIHSSTC*RYNILT Trigger: TGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATG...TATTTTTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR CCA 90 bp | CTTACCCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAATAAGGGCAGGAGGTTaGTACTATCATCATTTTATA | + |
Preference number: 2 (lower is better) Translates to: LTHNLLSTVSLAYLALVQIRAGG*YYHHFI Trigger: TATAAAATGATGATAGTACCAACCTCCTGCCCTTAT...TTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGGGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR-3UTR GCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACCTTGTTACAGTTTCTTaGACGTGTGTAGTGTTATTG | + |
Preference number: 2 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNLVTVS*TCVVLL Trigger: CAATAACACTACACACGTGCAAGAAACTGTAACAAG...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR CCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGACAAAACTATTTCCTTaGGAGTTAACCAACATTGAC | + |
Preference number: 2 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRTKLFP*ELTNID Trigger: GTCAATGTTGGTTAACTCCCAAGGAAATAGTTTTGT...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR CCA 90 bp | CCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAAAATAAATACAAAGTTATACTaGACTAAGGGCACGAACACT | + |
Preference number: 2 (lower is better) Translates to: PQFTFHSFTCLLSSGPKINTKLY*TKGTNT Trigger: AGTGTTCGTGCCCTTAGTCCAGTATAACTTTGTATT...TATTTTTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR CAA 90 bp | TTGCATAGTTTCATCATTCAAGTACCAGGCAATAAGGGCAGGAGGTaGGTACTATCATCATTTTATATCTACATGACAGATAATGAGATA | + |
Preference number: 2 (lower is better) Translates to: LHSFIIQVPGNKGRR*VLSSFYIYMTDNEI Trigger: TATCTCATTATCTGTCATGTAGATATAAAATGATGATAGTACCAACCTCCTGCCCTTATTGCCTGGTACTTGAATGATGAAACTATGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR TCA 72 bp | GCTGTGGTCATAAGGACAGCAGCGCGGGTAATGTGGTaGCAGGGATGGGCCTGGATGTCCTCCTGCGCTGTG | + |
Preference number: 3 (lower is better) Translates to: AVVIRTAARVMW*QGWAWMSSCAV Trigger: CACAGCGCAGGAGGACATCCAGGCCCATCCCTGTCACCACATTACCCGCGCTGCTGTCCTTATGACCACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR-3UTR CAA 90 bp | GGTCATAAGGACAGCAGCGCGGGTAATGTGGTGACAGGGATGGGCCTGGATGTCGGATCACCTACCTCTTaGACCTGGACTACGAGTCTG | + |
Preference number: 3 (lower is better) Translates to: GHKDSSAGNVVTGMGLDVGSPTS*TWTTSL Trigger: CAGACTCGTAGTCCAGGTCAAAGAGGTAGGTGATCC...GACATCCAGGCCCATCCCTGTCACCACATTACCCGCGCTGCTGTCCTTATGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR TCA 72 bp | GGGATGGGCCTGGATGTCCTCCTGCGCTGTGAGTTTTaGGCTGAAGCAGCTCCCGACTCTCTTGTGAACAGT | + |
Preference number: 3 (lower is better) Translates to: GMGLDVLLRCEF*AEAAPDSLVNS Trigger: ACTGTTCACAAGAGAGTCGGGAGCTGCTTCAGCTCAAAACTCACAGCGCAGGAGGACATCCAGGCCCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR GCA 72 bp | ACCAGGCAGGCCTCAGACTCAGAGATCCACCTGCCTTaGCTCTACCTCCCAAGTGCTGAGATTCAAGGCATA | + |
Preference number: 3 (lower is better) Translates to: TRQASDSEIHLP*LYLPSAEIQGI Trigger: TATGCCTTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGAGGCCTGCCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
3UTR GCA 72 bp | TCTAGACCAGGCAGGCCTCAGACTCAGAGATCCACCTaGCTTGCCTCTACCTCCCAAGTGCTGAGATTCAAG | + |
Preference number: 3 (lower is better) Translates to: SRPGRPQTQRST*LASTSQVLRFK Trigger: CTTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGAGGCCTGCCTGGTCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
3UTR-3UTR CAA 90 bp | GGTCATAAGGACAGCAGCGCGGGTAATGTGGTGACAGGGATGGGCCTGGATGTCGCAGAGGTGGAGAGCTaGCACAGTCTGATTATAATG | + |
Preference number: 3 (lower is better) Translates to: GHKDSSAGNVVTGMGLDVAEVES*HSLIIM Trigger: CATTATAATCAGACTGTGCAAGCTCTCCACCTCTGC...GACATCCAGGCCCATCCCTGTCACCACATTACCCGCGCTGCTGTCCTTATGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR TCA 72 bp | GTGAGTTTTGAGCTGAAGCAGCTCCCGACTCTCTTGTaGACAGTAAAGCTTCCCAGACAGTTCACCGCACGC | + |
Preference number: 3 (lower is better) Translates to: VSFELKQLPTLL*TVKLPRQFTAR Trigger: GCGTGCGGTGAACTGTCTGGGAAGCTTTACTGTTCACAAGAGAGTCGGGAGCTGCTTCAGCTCAAAACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR-3UTR CAA 90 bp | TGGGCCTGGATGTCCTCCTGCGCTGTGAGTTTTGAGCTGAAGCAGCTCCCGACTCACATCATTGTGCTCTaGGTGATGTGTAAAAAGAAC | + |
Preference number: 3 (lower is better) Translates to: WAWMSSCAVSFELKQLPTHIIVL*VMCKKN Trigger: GTTCTTTTTACACATCACCAAGAGCACAATGATGTG...AGTCGGGAGCTGCTTCAGCTCAAAACTCACAGCGCAGGAGGACATCCAGGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR TCA 72 bp | GTTTCACTTGAGCACTGTTGGAGTCTTCAGCTGAACTaGAGCTGTGGTCATAAGGACAGCAGCGCGGGTAAT | + |
Preference number: 3 (lower is better) Translates to: VSLEHCWSLQLN*SCGHKDSSAGN Trigger: ATTACCCGCGCTGCTGTCCTTATGACCACAGCTTCAGTTCAGCTGAAGACTCCAACAGTGCTCAAGTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR CCA 72 bp | TATAGAACAAAACCCTGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGCTTTTCTGAAGGTCCTG | + |
Preference number: 3 (lower is better) Translates to: YRTKPWAGEMAQ*LRALTAFLKVL Trigger: CAGGACCTTCAGAAAAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCAGGGTTTTGTTCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR CCA 72 bp | CTCGGTATGCTACCTGACAGTCACTTAGCAAGCCTCTaGATTATCAGGCCAACCATCAGAGAGTTACATGTG | + |
Preference number: 3 (lower is better) Translates to: LGMLPDSHLASL*IIRPTIRELHV Trigger: CACATGTAACTCTCTGATGGTTGGCCTGATAATCCAGAGGCTTGCTAAGTGACTGTCAGGTAGCATACCGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR-3UTR CAA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACAGAGATCCACCTGCCTaGCCTCTACCTCCCAAGTGC | + |
Preference number: 3 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNRDPPA*PLPPKC Trigger: GCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCT...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
3UTR TCA 72 bp | GCTAGCTCTTGGTCTTTCTTCCAAGTCATCTCAGCCTaGCTTTTCTCAGGACTTCCACTTTGGAAGCTTGAC | + |
Preference number: 3 (lower is better) Translates to: ASSWSFFQVISA*LFSGLPLWKLD Trigger: GTCAAGCTTCCAAAGTGGAAGTCCTGAGAAAAGTCAGGCTGAGATGACTTGGAAGAAAGACCAAGAGCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTTTAATGAGATCTaGCGTCCTCTTCTGGTGCATCTGAAGACAGCTACA | + |
Preference number: 3 (lower is better) Translates to: TTWWLTTIFNEI*RPLLVHLKTAT Trigger: TGTAGCTGTCTTCAGATGCACCAGAAGAGGACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR GCA 72 bp | GAACCGTATGCCTTTAGAGCAGTTGTTTTCAGCCTGTaGGGTGTTATCCCTTTAGGAGTTGAGCAGATCTTT | + |
Preference number: 3 (lower is better) Translates to: EPYAFRAVVFSL*GVIPLGVEQIF Trigger: AAAGATCTGCTCAACTCCTAAAGGGATAACACCGCACAGGCTGAAAACAACTGCTCTAAAGGCATACGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR CCA 72 bp | TGTGTCTACCCTCCAGGCCACATACATCCACAGCTATaGATATTGCCCAGGACTTTTATGTATAGCATTGTA | + |
Preference number: 3 (lower is better) Translates to: CVYPPGHIHPQL*ILPRTFMYSIV Trigger: TACAATGCTATACATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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3UTR-3UTR CAA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCTTCCTTACATTCAACTaGAGACCTCATAGCCACATA | + |
Preference number: 3 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVFLTFN*RPHSHI Trigger: TATGTGGCTATGAGGTCTCAAGTTGAATGTAAGGAA...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR TCA 72 bp | TCCTGCTGTGACCATTTCACATCATTGTGCTCTTGGTaGTGTGTAAAAAGAACGCTTGTGCACTGGATTTCT | + |
Preference number: 3 (lower is better) Translates to: SCCDHFTSLCSW*CVKRTLVHWIS Trigger: AGAAATCCAGTGCACAAGCGTTCTTTTTACACATCACCAAGAGCACAATGATGTGAAATGGTCACAGCAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR TCA 72 bp | TGTTTTCAGCCTGTGCGGTGTTATCCCTTTAGGAGTTaGGCAGATCTTTTACAGGGTCGTATATCAAATGTC | + |
Preference number: 3 (lower is better) Translates to: CFQPVRCYPFRS*ADLLQGRISNV Trigger: GACATTTGATATACGACCCTGTAAAAGATCTGCTCAACTCCTAAAGGGATAACACCGCACAGGCTGAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR CCA 72 bp | TTTGTTTCTTTGGTTCCACACTACTGTACTATTCTGTaGTTTTGGAGAACACAGGGTCACCTGTGGTCCTAT | + |
Preference number: 3 (lower is better) Translates to: FVSLVPHYCTIL*FWRTQGHLWSY Trigger: ATAGGACCACAGGTGACCCTGTGTTCTCCAAAACCACAGAATAGTACAGTAGTGTGGAACCAAAGAAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
3UTR TCA 72 bp | AAATACAAAACTATTTCCTTGGGAGTTAACCAACATTaGCTATGTAGCCCTGGCTGTCCTGGAACTCAGTGT | + |
Preference number: 3 (lower is better) Translates to: KYKTISLGVNQH*LCSPGCPGTQC Trigger: ACACTGAGTTCCAGGACAGCCAGGGCTACATAGTCAATGTTGGTTAACTCCCAAGGAAATAGTTTTGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR TCA 72 bp | TTATATAGATGTGTCACTCTGCAGATTTCTTGTGGTTaGTCTAACAAGTGTGTCTACCCTCCAGGCCACATA | + |
Preference number: 3 (lower is better) Translates to: LYRCVTLQISCG*SNKCVYPPGHI Trigger: TATGTGGCCTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACACATCTATATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
||
3UTR GCA 72 bp | TTCTCCTGTATCCCAGGGATTCATTCCAGCACTTGCTaGAGATACAACATTCTTACAAGTTCCTTACATTCA | + |
Preference number: 3 (lower is better) Translates to: FSCIPGIHSSTC*RYNILTSSLHS Trigger: TGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGAATCCCTGGGATACAGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
3UTR CCA 72 bp | GGTGTTGCTTTCAGTACAAGAATGCAGGCAAGTCTTTaGGTCATGGAGCAAACTAACATTGAAGATGAAAGA | + |
Preference number: 3 (lower is better) Translates to: GVAFSTRMQASL*VMEQTNIEDER Trigger: TCTTTCATCTTCAATGTTAGTTTGCTCCATGACCCAAAGACTTGCCTGCATTCTTGTACTGAAAGCAACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR CAA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACCTGCCCAGGATAGCATaGTTCTCTACAAGAACCATA | + |
Preference number: 3 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNLPRIA*FSTRTI Trigger: TATGGTTCTTGTAGAGAACAATGCTATCCTGGGCAG...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
3UTR-3UTR CAA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGCACATCATTGTGCTCTaGGTGATGTGTAAAAAGAAC | + |
Preference number: 3 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRHIIVL*VMCKKN Trigger: GTTCTTTTTACACATCACCAAGAGCACAATGATGTG...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
3UTR-3UTR CAA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACCACATCATTGTGCTCTaGGTGATGTGTAAAAAGAAC | + |
Preference number: 3 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNHIIVL*VMCKKN Trigger: GTTCTTTTTACACATCACCAAGAGCACAATGATGTG...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
3UTR GCA 72 bp | AAAATAATCTTACTGGTGTTGCTTTCAGTACAAGAATaGAGGCAAGTCTTTGGGTCATGGAGCAAACTAACA | + |
Preference number: 3 (lower is better) Translates to: KIILLVLLSVQE*RQVFGSWSKLT Trigger: TGTTAGTTTGCTCCATGACCCAAAGACTTGCCTGCATTCTTGTACTGAAAGCAACACCAGTAAGATTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR CCA 72 bp | CTTTCAGTACAAGAATGCAGGCAAGTCTTTGGGTCATaGAGCAAACTAACATTGAAGATGAAAGAAATCAGT | + |
Preference number: 3 (lower is better) Translates to: LSVQECRQVFGS*SKLTLKMKEIS Trigger: ACTGATTTCTTTCATCTTCAATGTTAGTTTGCTCCATGACCCAAAGACTTGCCTGCATTCTTGTACTGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR-3UTR CAA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTAAGTTCTTAATTCTGTaGGCTGATTGTGATCGTGAA | + |
Preference number: 3 (lower is better) Translates to: STEADQQNKLCVERIKIFKFLIL*ADCDRE Trigger: TTCACGATCACAATCAGCCAACAGAATTAAGAACTT...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR TCA 72 bp | TTAGAGATAAGATGGTTCAGATTAGTGCTGCTTGCATaGTTCTTTTCCTCAACTGAAGGACAATCACTTACA | + |
Preference number: 3 (lower is better) Translates to: LEIRWFRLVLLA*FFSSTEGQSLT Trigger: TGTAAGTGATTGTCCTTCAGTTGAGGAAAAGAATCATGCAAGCAGCACTAATCTGAACCATCTTATCTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR GCA 72 bp | ATAAGCACAAGATTAGTAATACTAGCAATTTGGATTTaGCAAGATGTTTCCTTGAAGCCACAAGGTGAAAGT | + |
Preference number: 3 (lower is better) Translates to: ISTRLVILAIWI*QDVSLKPQGES Trigger: ACTTTCACCTTGTGGCTTCAAGGAAACATCTTGGCAAATCCAAATTGCTAGTATTACTAATCTTGTGCTTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR CCA 72 bp | TTGTTCATAAGCACAAGATTAGTAATACTAGCAATTTaGATTTGCCAAGATGTTTCCTTGAAGCCACAAGGT | + |
Preference number: 3 (lower is better) Translates to: LFISTRLVILAI*ICQDVSLKPQG Trigger: ACCTTGTGGCTTCAAGGAAACATCTTGGCAAATCCAAATTGCTAGTATTACTAATCTTGTGCTTATGAACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR TCA 90 bp | TGGGCCTGGATGTCCTCCTGCGCTGTGAGTTTTGAGCTGAAGCAGCTCCCGACTTTGTGTGTGCGCATGTaGATGCAGGTGCCATGGAGG | + |
Preference number: 4 (lower is better) Translates to: WAWMSSCAVSFELKQLPTLCVRM*MQVPWR Trigger: CCTCCATGGCACCTGCATTCACATGCGCACACACAA...AGTCGGGAGCTGCTTCAGCTCAAAACTCACAGCGCAGGAGGACATCCAGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR TCA 90 bp | GGTCATAAGGACAGCAGCGCGGGTAATGTGGTGACAGGGATGGGCCTGGATGTCGAAGCAAGCTCTGTATaGGCTCTCTCCAGTCCTAAC | + |
Preference number: 4 (lower is better) Translates to: GHKDSSAGNVVTGMGLDVEASSV*ALSSPN Trigger: GTTAGGACTGGAGAGAGCTCATACAGAGCTTGCTTC...GACATCCAGGCCCATCCCTGTCACCACATTACCCGCGCTGCTGTCCTTATGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR TCA 90 bp | GTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACACTGATCCTGGGCAGTaGCCAGCTGGTAAGAGAGTC | + |
Preference number: 4 (lower is better) Translates to: VCLPSRPHTSTAMDIAQDTDPGQ*PAGKRV Trigger: GACTCTCTTACCAGCTGGTCACTGCCCAGGATCAGT...GTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR TCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAATTGTGTGTGCGCATGTaGATGCAGGTGCCATGGAGG | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQLCVRM*MQVPWR Trigger: CCTCCATGGCACCTGCATTCACATGCGCACACACAA...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAACTGAAAACACTCTTCTaGCTTTGGGTGGCGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQLKTLF*LWVAAG Trigger: GCCTGCCGCCACCCAAAGGCAGAAGAGTGTTTTCAG...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | GTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACACACACTCTCTGCTTTaGAGCCTCCTGGGCTTTGTC | + |
Preference number: 4 (lower is better) Translates to: VCLPSRPHTSTAMDIAQDTHSLL*SLLGFV Trigger: GACAAAGCCCAGGAGGCTGCAAAGCAGAGAGTGTGT...GTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
||
CDS-3UTR GCA 90 bp | GGTCATAAGGACAGCAGCGCGGGTAATGTGGTGACAGGGATGGGCCTGGATGTCGTAAAGATTTGTGTGTaGGCATGTGAATGCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: GHKDSSAGNVVTGMGLDVVKICV*ACECRC Trigger: GCACCTGCATTCACATGCGCACACACAAATCTTTAC...GACATCCAGGCCCATCCCTGTCACCACATTACCCGCGCTGCTGTCCTTATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
CDS-3UTR CCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTTTCAGCCACACGACGTaGTGCGGACTCCTAGTGACC | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFFSHTT*CGLLVT Trigger: GGTCACTAGGAGTCCGCACCACGTCGTGTGGCTGAA...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
||
CDS-3UTR CCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTACACTCTTCTGCCTTTaGGTGGCGGCAGGCGTGGAT | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFTLFCL*VAAGVD Trigger: ATCCACGCCTGCCGCCACCCAAAGGCAGAAGAGTGT...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
||
CDS-3UTR CCA 90 bp | TGGGCCTGGATGTCCTCCTGCGCTGTGAGTTTTGAGCTGAAGCAGCTCCCGACTTCACGTTGGTTTTTCTaGTCCTCTCTCCAAACCACA | + |
Preference number: 4 (lower is better) Translates to: WAWMSSCAVSFELKQLPTSRWFF*SSLQTT Trigger: TGTGGTTTGGAGAGAGGACCAGAAAAACCAACGTGA...AGTCGGGAGCTGCTTCAGCTCAAAACTCACAGCGCAGGAGGACATCCAGGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
CDS-3UTR CCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAATTTGGCTCAACACTTTaGGGAGACCGGCACAGAGGC | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQFGSTL*GDRHRG Trigger: GCCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAA...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAAATGGAGGCCAGAAGCTaGAGTTTGAGGCTAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQMEARS*SLRLGR Trigger: CCTCCCTAGCCTCAAACTCCAGCTTCTGGCCTCCAT...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
CDS-3UTR TCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTACTGCAGAGCTTTGGTaGCTGAGATCCCCCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFTAELW*LRSPCL Trigger: GAGACAGGGGGATCTCAGTCACCAAAGCTCTGCAGT...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
||
CDS-3UTR GCA 90 bp | ACAAGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCACTGAAAACACTCTTCTaGCTTTGGGTGGCGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: TSVSTLQATYIHSYGYCPLKTLF*LWVAAG Trigger: GCCTGCCGCCACCCAAAGGCAGAAGAGTGTTTTCAG...TGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
||
CDS-3UTR GCA 90 bp | GGTCATAAGGACAGCAGCGCGGGTAATGTGGTGACAGGGATGGGCCTGGATGTCGCTGATTGTGTGGAGTaGAGTTTTGTTTTGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: GHKDSSAGNVVTGMGLDVADCVE*SFVLGS Trigger: ACTTCCCAAAACAAAACTGCACTCCACACAATCAGC...GACATCCAGGCCCATCCCTGTCACCACATTACCCGCGCTGCTGTCCTTATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
CDS-3UTR GCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTTCCGGATCAGCATTTTaGTGGACGAGTGTCGAGGGG | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFSGSAF*WTSVEG Trigger: CCCCTCGACACTCGTCCAGCAAAATGCTGATCCGGA...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCATTCAGCCACACGACGTaGTGCGGACTCCTAGTGACC | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPFSHTT*CGLLVT Trigger: GGTCACTAGGAGTCCGCACCACGTCGTGTGGCTGAA...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAACACTCTTCTGCCTTTaGGTGGCGGCAGGCGTGGAT | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPTLFCL*VAAGVD Trigger: ATCCACGCCTGCCGCCACCCAAAGGCAGAAGAGTGT...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAATGCTTTGCAGCCTCCTaGGCTTTGTCTCAGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQCFAAS*ALSQFR Trigger: CCTGAACTGAGACAAAGCCCAGGAGGCTGCAAAGCA...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAACTGATCCTGGGCAGTaGCCAGCTGGTAAGAGAGTC | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPTDPGQ*PAGKRV Trigger: GACTCTCTTACCAGCTGGTCACTGCCCAGGATCAGT...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR TCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAAGAAAACAGCTCAGGCTaGAGAGTTAGCTGGTACGGA | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQENSSG*RVSWYG Trigger: TCCGTACCAGCTAACTCTTCAGCCTGAGCTGTTTTC...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGAGAAAACAGCTCAGGCTaGAGAGTTAGCTGGTACGGA | + |
Preference number: 4 (lower is better) Translates to: SVSTLQATYIHSYGYCPGENSSG*RVSWYG Trigger: TCCGTACCAGCTAACTCTTCAGCCTGAGCTGTTTTC...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR TCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTCAGAGCTTTGGTGACTaGGATCCCCCTGTCTCTATG | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFQSFGD*DPPVSM Trigger: CATAGAGACAGGGGGATCTCAGTCACCAAAGCTCTG...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAAACTCTGCCTCCAGAGTaGAGAAGCTCCATTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQTLPPE*RSSILE Trigger: TTCCAGAATGGAGCTTCTGCACTCTGGAGGCAGAGT...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR GCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCACTGAAAACACTCTTCTaGCTTTGGGTGGCGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPLKTLF*LWVAAG Trigger: GCCTGCCGCCACCCAAAGGCAGAAGAGTGTTTTCAG...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | TTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGGCCACATACATCCACGCTCCACACACTCTCTaGTTTGCAGCCTCCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: FLVVDLTSVSTLQATYIHAPHTL*FAASWA Trigger: AGCCCAGGAGGCTGCAAAGCAGAGAGTGTGTGGAGC...GTGGATGTATGTGGCCTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCATCCGGATCAGCATTTTaGTGGACGAGTGTCGAGGGG | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPSGSAF*WTSVEG Trigger: CCCCTCGACACTCGTCCAGCAAAATGCTGATCCGGA...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAGCATGTGAATGCAGGTaGCATGGAGGCCAGAAGCTG | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPACECR*HGGQKL Trigger: CAGCTTCTGGCCTCCATGGCACCTGCATTCACATGC...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTCAGGTGGAGACTTCCTaGCACTCAGGGTGTCTAGTT | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFQVETS*HSGCLV Trigger: AACTAGACACCCTGAGTGGCAGGAAGTCTCCACCTG...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | GTTTTGGAGAACACAGGGTCACCTGTGGTCCTATGTGAGAGGCTGAGGGAGAAATGTCGAAGCGGTCAATaGAGATGGTTGGATACTCCG | + |
Preference number: 4 (lower is better) Translates to: VLENTGSPVVLCERLREKCRSGQ*RWLDTP Trigger: CGGAGTATCCAACCATCTCCATTGACCGCTTCGACA...TTTCTCCCTCAGCCTCTCACATAGGACCACAGGTGACCCTGTGTTCTCCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR CCA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTGTCCGTTGTGAGATaGTGCAGGATATCAGGCATG | + |
Preference number: 4 (lower is better) Translates to: SVSTLQATYIHSYGYCPGLSVVR*CRISGM Trigger: CATGCCTGATATCCTGCACCATCTCACAACGGACAG...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCACACTCTTCTGCCTTTaGGTGGCGGCAGGCGTGGAT | + |
Preference number: 4 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVTLFCL*VAAGVD Trigger: ATCCACGCCTGCCGCCACCCAAAGGCAGAAGAGTGT...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR CCA 90 bp | CTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTATTTTGGCTCAACACTTTaGGGAGACCGGCACAGAGGC | + |
Preference number: 4 (lower is better) Translates to: LPSRPHTSTAMDIAQDFYFGSTL*GDRHRG Trigger: GCCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAA...ATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAATGGAGGCCAGAAGCTaGAGTTTGAGGCTAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPMEARS*SLRLGR Trigger: CCTCCCTAGCCTCAAACTCCAGCTTCTGGCCTCCAT...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGATCACTGAAGGAGGAGTaGAAAGAGAAGCAAGCTCTG | + |
Preference number: 4 (lower is better) Translates to: SVSTLQATYIHSYGYCPGSLKEE*KEKQAL Trigger: CAGAGCTTGCTTCTCTTTTCACTCCTCCTTCAGTGA...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | GTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACGGAAGACCTTCAAGCTaGATTCCAGCCTTCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: VCLPSRPHTSTAMDIAQDGRPSS*IPAFFS Trigger: TGAAAAGAAGGCTGGAATGCAGCTTGAAGGTCTTCC...GTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGAGGATGTCTTTTACTCTaGCTCCAGAGTGCAGAAGCT | + |
Preference number: 4 (lower is better) Translates to: SVSTLQATYIHSYGYCPGGCLLL*LQSAEA Trigger: AGCTTCTGCACTCTGGAGGCAGAGTAAAAGACATCC...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCGCATGTGAATGCAGGTaGCATGGAGGCCAGAAGCTG | + |
Preference number: 4 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVACECR*HGGQKL Trigger: CAGCTTCTGGCCTCCATGGCACCTGCATTCACATGC...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR CCA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACAGCTCCTTAGTGACTaGAGAACAGTACAGGAAGAC | + |
Preference number: 4 (lower is better) Translates to: SVSTLQATYIHSYGYCPGQLLSD*RTVQED Trigger: GTCTTCCTGTACTGTTCTCCAGTCACTAAGGAGCTG...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | GTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTCACGTTGGTTTTTCTaGTCCTCTCTCCAAACCACA | + |
Preference number: 4 (lower is better) Translates to: VCLPSRPHTSTAMDIAQDSRWFF*SSLQTT Trigger: TGTGGTTTGGAGAGAGGACCAGAAAAACCAACGTGA...GTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAACACAGTGAGGCCAACTaGGATGACATTTGGATACAC | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQHSEAN*DDIWIH Trigger: GTGTATCCAAATGTCATCCCAGTTGGCCTCACTGTG...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCTTTGGCTCAACACTTTaGGGAGACCGGCACAGAGGC | + |
Preference number: 4 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVFGSTL*GDRHRG Trigger: GCCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAA...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR CCA 90 bp | CTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTATTGCTTTGCAGCCTCCTaGGCTTTGTCTCAGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: LPSRPHTSTAMDIAQDFYCFAAS*ALSQFR Trigger: CCTGAACTGAGACAAAGCCCAGGAGGCTGCAAAGCA...ATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR TCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAGAAAACAGCTCAGGCTaGAGAGTTAGCTGGTACGGA | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPENSSG*RVSWYG Trigger: TCCGTACCAGCTAACTCTTCAGCCTGAGCTGTTTTC...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | CTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTATTGGCAGTGCCTTCATTaGAAACAGCTCAGGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: LPSRPHTSTAMDIAQDFYWQCLH*KQLRLK Trigger: CTTCAGCCTGAGCTGTTTTCAATGAAGGCACTGCCA...ATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAAGGAAGACCTTCAAGCTaGATTCCAGCCTTCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQGRPSS*IPAFFS Trigger: TGAAAAGAAGGCTGGAATGCAGCTTGAAGGTCTTCC...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR GCA 90 bp | CTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTATGCTTTGGTGAGTCACTaGAGAGCTTTGGTGAGTCAC | + |
Preference number: 4 (lower is better) Translates to: LPSRPHTSTAMDIAQDFYALVSH*RALVSH Trigger: GTGACTCACCAAAGCTCTGCAGTGACTCACCAAAGC...ATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | TGGGCCTGGATGTCCTCCTGCGCTGTGAGTTTTGAGCTGAAGCAGCTCCCGACTTCTAAATACACACTTTaGATGTCTTTTACTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: WAWMSSCAVSFELKQLPTSKYTL*MSFTLP Trigger: AGGCAGAGTAAAAGACATCCAAAGTGTGTATTTAGA...AGTCGGGAGCTGCTTCAGCTCAAAACTCACAGCGCAGGAGGACATCCAGGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCACTGTCCGTTGTGAGATaGTGCAGGATATCAGGCATG | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPLSVVR*CRISGM Trigger: CATGCCTGATATCCTGCACCATCTCACAACGGACAG...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTCACAGTGAGGCCAACTaGGATGACATTTGGATACAC | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFHSEAN*DDIWIH Trigger: GTGTATCCAAATGTCATCCCAGTTGGCCTCACTGTG...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTATGGGAAGAGATATGGGTaGAGTCTCCATCAGAGTCAC | + |
Preference number: 4 (lower is better) Translates to: LPSRPHTSTAMDIAQDFYGKRYG*SLHQSH Trigger: GTGACTCTGATGGAGACTCCACCCATATCTCTTCCC...ATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR TCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCTGGCAGTGCCTTCATTaGAAACAGCTCAGGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVWQCLH*KQLRLK Trigger: CTTCAGCCTGAGCTGTTTTCAATGAAGGCACTGCCA...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR TCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATCTCCTTTTGCCAGTCTaGAGTCTCCTCACCCGAAGC | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHLLLPV*SLLTRS Trigger: GCTTCGGGTGAGGAGACTTCAGACTGGCAAAAGGAG...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGGCTCCACACACTCTCTaGTTTGCAGCCTCCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRAPHTL*FAASWA Trigger: AGCCCAGGAGGCTGCAAAGCAGAGAGTGTGTGGAGC...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGGTGTGCGCATGTGAATaGAGGTGCCATGGAGGCCAG | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRVCACE*RCHGGQ Trigger: CTGGCCTCCATGGCACCTGCATTCACATGCGCACAC...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGCTCCATCAGAGTCACTaGAGAGCTTTGGTGAGTCAC | + |
Preference number: 4 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQLHQSH*RALVSH Trigger: GTGACTCACCAAAGCTCTGCAGTGACTCTGATGGAG...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGAGCGGTCAATGGAGATaGTTGGATACTCCGCCATCT | + |
Preference number: 4 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQSGQWR*LDTPPS Trigger: AGATGGCGGAGTATCCAACCATCTCCATTGACCGCT...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCACAGCTCCTTAGTGACTaGAGAACAGTACAGGAAGAC | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPQLLSD*RTVQED Trigger: GTCTTCCTGTACTGTTCTCCAGTCACTAAGGAGCTG...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR CCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAAGATCTGATAAAACCTTaGGTCACAGAAAGTCGTGTC | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQDLIKP*VTESRV Trigger: GACACGACTTTCTGTGACCCAAGGTTTTATCAGATC...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCACACAGTGAGGCCAACTaGGATGACATTTGGATACAC | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPHSEAN*DDIWIH Trigger: GTGTATCCAAATGTCATCCCAGTTGGCCTCACTGTG...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATATGGAGGCCAGAAGCTaGAGTTTGAGGCTAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHMEARS*SLRLGR Trigger: CCTCCCTAGCCTCAAACTCCAGCTTCTGGCCTCCAT...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTGCTCCACACACTCTCTaGTTTGCAGCCTCCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFAPHTL*FAASWA Trigger: AGCCCAGGAGGCTGCAAAGCAGAGAGTGTGTGGAGC...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACGTGTGCGCATGTGAATaGAGGTGCCATGGAGGCCAG | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNVCACE*RCHGGQ Trigger: CTGGCCTCCATGGCACCTGCATTCACATGCGCACAC...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAGTAAAGATTTGTGTGTaGGCATGTGAATGCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPVKICV*ACECRC Trigger: GCACCTGCATTCACATGCGCACACACAAATCTTTAC...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTGATCTGATAAAACCTTaGGTCACAGAAAGTCGTGTC | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFDLIKP*VTESRV Trigger: GACACGACTTTCTGTGACCCAAGGTTTTATCAGATC...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
||
CDS-3UTR CCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTTTCAGCCACACGACGTaGTGCGGACTCCTAGTGACC | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFFSHTT*CGLLVT Trigger: GGTCACTAGGAGTCCGCACCACGTCGTGTGGCTGAA...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTACACTCTTCTGCCTTTaGGTGGCGGCAGGCGTGGAT | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFTLFCL*VAAGVD Trigger: ATCCACGCCTGCCGCCACCCAAAGGCAGAAGAGTGT...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCATCACGTTGGTTTTTCTaGTCCTCTCTCCAAACCACA | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPSRWFF*SSLQTT Trigger: TGTGGTTTGGAGAGAGGACCAGAAAAACCAACGTGA...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
CDS-3UTR CCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAATGGATACACATTCACTaGGCAGATGTAGCTCAAAAA | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQWIHIH*ADVAQK Trigger: TTTTTGAGCTACATCTGCCCAGTGAATGTGTATCCA...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
||
CDS-3UTR CCA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGATGGATACACATTCACTaGGCAGATGTAGCTCAAAAA | + |
Preference number: 4 (lower is better) Translates to: SVSTLQATYIHSYGYCPGWIHIH*ADVAQK Trigger: TTTTTGAGCTACATCTGCCCAGTGAATGTGTATCCA...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTATAAGCGGTTTGTACTTTaGCTCAACACTTTGGGGAGA | + |
Preference number: 4 (lower is better) Translates to: LPSRPHTSTAMDIAQDFYKRFVL*LNTLGR Trigger: TCTCCCCAAAGTGTTGAGCCAAAGTACAAACCGCTT...ATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR TCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTACTGATCCTGGGCAGTaGCCAGCTGGTAAGAGAGTC | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFTDPGQ*PAGKRV Trigger: GACTCTCTTACCAGCTGGTCACTGCCCAGGATCAGT...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR TCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGGGGAGGTGGCTAGCTTaGATGTTGGGAGTGAACTCT | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRGRWLA*MLGVNS Trigger: AGAGTTCACTCCCAACATTCAAGCTAGCCACCTCCC...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTTTGTGTGTGCGCATGTaGATGCAGGTGCCATGGAGG | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFLCVRM*MQVPWR Trigger: CCTCCATGGCACCTGCATTCACATGCGCACACACAA...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | ACAAGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCACAGAAATACTCTCTTTaGGTTTTGGTTTGTAGGCAC | + |
Preference number: 4 (lower is better) Translates to: TSVSTLQATYIHSYGYCPQKYSL*VLVCRH Trigger: GTGCCTACAAACCAAAACTCAAAGAGAGTATTTCTG...TGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACCTGAAAACACTCTTCTaGCTTTGGGTGGCGGCAGGC | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNLKTLF*LWVAAG Trigger: GCCTGCCGCCACCCAAAGGCAGAAGAGTGTTTTCAG...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | CTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTATGCTGATTGTGTGGAGTaGAGTTTTGTTTTGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: LPSRPHTSTAMDIAQDFYADCVE*SFVLGS Trigger: ACTTCCCAAAACAAAACTGCACTCCACACAATCAGC...ATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | TTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGGCCACATACATCCACTGGTACGGAACTTTGTaGCTTAAAGGTGTCGGTAGA | + |
Preference number: 4 (lower is better) Translates to: FLVVDLTSVSTLQATYIHWYGTL*LKGVGR Trigger: TCTACCGACACCTTTAAGGCACAAAGTTCCGTACCA...GTGGATGTATGTGGCCTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACTCCGGATCAGCATTTTaGTGGACGAGTGTCGAGGGG | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNSGSAF*WTSVEG Trigger: CCCCTCGACACTCGTCCAGCAAAATGCTGATCCGGA...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTGCATGTGAATGCAGGTaGCATGGAGGCCAGAAGCTG | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFACECR*HGGQKL Trigger: CAGCTTCTGGCCTCCATGGCACCTGCATTCACATGC...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGTTCCTGTATAAGCACTaGAAATGCTCTGGCGTAGGA | + |
Preference number: 4 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQFLYKH*KCSGVG Trigger: TCCTACGCCAGAGCATTTGCAGTGCTTATACAGGAA...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCATTTTACTCTCCAGAGTaGAGAAGCTCCATTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPFYSPE*RSSILE Trigger: TTCCAGAATGGAGCTTCTGCACTCTGGAGAGTAAAA...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATTGTCGAAGCGGTCAATaGAGATGGTTGGATACTCCG | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHCRSGQ*RWLDTP Trigger: CGGAGTATCCAACCATCTCCATTGACCGCTTCGACA...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR CCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATCTGTCCGTTGTGAGATaGTGCAGGATATCAGGCATG | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHLSVVR*CRISGM Trigger: CATGCCTGATATCCTGCACCATCTCACAACGGACAG...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTAGTGCAGTTTTGTTTTaGGAAGTTATACCACAGGGT | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFSAVLF*EVIPQG Trigger: ACCCTGTGGTATAACTTCCCAAAACAAAACTGCACT...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAAAACCACATGGTAGATaGCTTGATGCTGATTGTGTG | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPKPHGR*LDADCV Trigger: CACACAATCAGCATCAAGCCATCTACCATGTGGTTT...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACTTTGGCTCAACACTTTaGGGAGACCGGCACAGAGGC | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNFGSTL*GDRHRG Trigger: GCCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAA...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGTGCTTTGCAGCCTCCTaGGCTTTGTCTCAGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRCFAAS*ALSQFR Trigger: CCTGAACTGAGACAAAGCCCAGGAGGCTGCAAAGCA...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCATGTATTTCCAGGTTCTaGAGAAGCATCTTCAGACTC | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPCISRF*RSIFRL Trigger: GAGTCTGAAGATGCTTCTCCAGAACCTGGAAATACA...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGACAGTGAGTATCTTGTaGACACAGTGCATCCTGTTC | + |
Preference number: 4 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQTVSIL*TQCILF Trigger: GAACAGGATGCACTGTGTCCACAAGATACTCACTGT...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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3UTR CAA 72 bp | TTCTTTGGTTCCACACTACTGTACTATTCTGTGGTTTaGGAGAACACAGGGTCACCTGTGGTCCTATGTGAG | + |
Preference number: 4 (lower is better) Translates to: FFGSTLLYYSVV*ENTGSPVVLCE Trigger: CTCACATAGGACCACAGGTGACCCTGTGTTCTCCAAAACCACAGAATAGTACAGTAGTGTGGAACCAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR TCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATTCACTGAAGGAGGAGTaGAAAGAGAAGCAAGCTCTG | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHSLKEE*KEKQAL Trigger: CAGAGCTTGCTTCTCTTTTCACTCCTCCTTCAGTGA...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGTGGCAGTGCCTTCATTaGAAACAGCTCAGGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRWQCLH*KQLRLK Trigger: CTTCAGCCTGAGCTGTTTTCAATGAAGGCACTGCCA...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | CCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAAAATAGGGAGGTGGCTAGCTTaGATGTTGGGAGTGAACTCT | + |
Preference number: 4 (lower is better) Translates to: PQFTFHSFTCLLSSGPKIGRWLA*MLGVNS Trigger: AGAGTTCACTCCCAACATTCAAGCTAGCCACCTCCC...TATTTTTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR TCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTGGGAGGTGGCTAGCTTaGATGTTGGGAGTGAACTCT | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFGRWLA*MLGVNS Trigger: AGAGTTCACTCCCAACATTCAAGCTAGCCACCTCCC...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | TTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGGCCACATACATCCACGCATCCTGTTCTATTTaGGAGGCAGAAATACTCTCT | + |
Preference number: 4 (lower is better) Translates to: FLVVDLTSVSTLQATYIHASCSI*EAEILS Trigger: AGAGAGTATTTCTGCCTCTCAAATAGAACAGGATGC...GTGGATGTATGTGGCCTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR GCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTACACACTCTCTGCTTTaGAGCCTCCTGGGCTTTGTC | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFTHSLL*SLLGFV Trigger: GACAAAGCCCAGGAGGCTGCAAAGCAGAGAGTGTGT...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAATCTAAATACACACTTTaGATGTCTTTTACTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQSKYTL*MSFTLP Trigger: AGGCAGAGTAAAAGACATCCAAAGTGTGTATTTAGA...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR CCA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGAAACCACATGGTAGATaGCTTGATGCTGATTGTGTG | + |
Preference number: 4 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQKPHGR*LDADCV Trigger: CACACAATCAGCATCAAGCCATCTACCATGTGGTTT...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCATGGATACACATTCACTaGGCAGATGTAGCTCAAAAA | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPWIHIH*ADVAQK Trigger: TTTTTGAGCTACATCTGCCCAGTGAATGTGTATCCA...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGGCCACATACATCCACAACTGGGATGACATTTaGATACACATTCACTGGGCA | + |
Preference number: 4 (lower is better) Translates to: FLVVDLTSVSTLQATYIHNWDDI*IHIHWA Trigger: TGCCCAGTGAATGTGTATCCAAATGTCATCCCAGTT...GTGGATGTATGTGGCCTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATCACAGTGAGGCCAACTaGGATGACATTTGGATACAC | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHHSEAN*DDIWIH Trigger: GTGTATCCAAATGTCATCCCAGTTGGCCTCACTGTG...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTGAAGCAAGCTCTGTATaGGCTCTCTCCAGTCCTAAC | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFEASSV*ALSSPN Trigger: GTTAGGACTGGAGAGAGCTCATACAGAGCTTGCTTC...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGCTTTTCAAATCACAGTaGGTATCTTGTGGACACAGT | + |
Preference number: 4 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQLFKSQ*VSCGHS Trigger: ACTGTGTCCACAAGATACTCACTGTGATTTGAAAAG...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
||
CDS-3UTR GCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATGGAAGACCTTCAAGCTaGATTCCAGCCTTCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHGRPSS*IPAFFS Trigger: TGAAAAGAAGGCTGGAATGCAGCTTGAAGGTCTTCC...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR GCA 90 bp | CCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAAAATAACTCTGCCTCCAGAGTaGAGAAGCTCCATTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: PQFTFHSFTCLLSSGPKITLPPE*RSSILE Trigger: TTCCAGAATGGAGCTTCTGCACTCTGGAGGCAGAGT...TATTTTTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
CDS-3UTR GCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGGGATGTCTTTTACTCTaGCTCCAGAGTGCAGAAGCT | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRGCLLL*LQSAEA Trigger: AGCTTCTGCACTCTGGAGGCAGAGTAAAAGACATCC...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR GCA 90 bp | CTTACCCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAATGGTACGGAACTTTGTaGCTTAAAGGTGTCGGTAGA | + |
Preference number: 4 (lower is better) Translates to: LTHNLLSTVSLAYLALVQWYGTL*LKGVGR Trigger: TCTACCGACACCTTTAAGGCACAAAGTTCCGTACCA...TTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGGGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
||
CDS-3UTR CCA 90 bp | CCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAAAATAAGCGGTCAATGGAGATaGTTGGATACTCCGCCATCT | + |
Preference number: 4 (lower is better) Translates to: PQFTFHSFTCLLSSGPKISGQWR*LDTPPS Trigger: AGATGGCGGAGTATCCAACCATCTCCATTGACCGCT...TATTTTTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR CCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTAGCGGTCAATGGAGATaGTTGGATACTCCGCCATCT | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFSGQWR*LDTPPS Trigger: AGATGGCGGAGTATCCAACCATCTCCATTGACCGCT...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR CCA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTTCTAAATACACACTTTaGATGTCTTTTACTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: VYPPGHIHPQLWILPRTFSKYTL*MSFTLP Trigger: AGGCAGAGTAAAAGACATCCAAAGTGTGTATTTAGA...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTCTGTCCGTTGTGAGATaGTGCAGGATATCAGGCATG | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFLSVVR*CRISGM Trigger: CATGCCTGATATCCTGCACCATCTCACAACGGACAG...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGGCCACATACATCCACTTGATGCTGATTGTGTaGAGTGCAGTTTTGTTTTGG | + |
Preference number: 4 (lower is better) Translates to: FLVVDLTSVSTLQATYIHLMLIV*SAVLFW Trigger: CCAAAACAAAACTGCACTCCACACAATCAGCATCAA...GTGGATGTATGTGGCCTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATAAGCGGTTTGTACTTTaGCTCAACACTTTGGGGAGA | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHKRFVL*LNTLGR Trigger: TCTCCCCAAAGTGTTGAGCCAAAGTACAAACCGCTT...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR CAA 72 bp | TACCCTCCAGGCCACATACATCCACAGCTATGGATATaGCCCAGGACTTTTATGTATAGCATTGTATTGCAA | + |
Preference number: 4 (lower is better) Translates to: YPPGHIHPQLWI*PRTFMYSIVLQ Trigger: TTGCAATACAATGCTATACATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR TCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACTCACTGAAGGAGGAGTaGAAAGAGAAGCAAGCTCTG | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNSLKEE*KEKQAL Trigger: CAGAGCTTGCTTCTCTTTTCACTCCTCCTTCAGTGA...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTTCACTGAAGGAGGAGTaGAAAGAGAAGCAAGCTCTG | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFSLKEE*KEKQAL Trigger: CAGAGCTTGCTTCTCTTTTCACTCCTCCTTCAGTGA...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | CTTACCCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAATCTTCAGACTCCATTaGCCACAGCCTTTCATCTTT | + |
Preference number: 4 (lower is better) Translates to: LTHNLLSTVSLAYLALVQIFRLH*PQPFIF Trigger: AAAGATGAAAGGCTGTGGTCAATGGAGTCTGAAGAT...TTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGGGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR GCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATGCTGATTGTGTGGAGTaGAGTTTTGTTTTGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHADCVE*SFVLGS Trigger: ACTTCCCAAAACAAAACTGCACTCCACACAATCAGC...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACGGAAGCTTCTCCTTTTaGCAGTCTGAAGTCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNGSFSF*QSEVSS Trigger: TGAGGAGACTTCAGACTGGCAAAAGGAGAAGCTTCC...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATGATCTGATAAAACCTTaGGTCACAGAAAGTCGTGTC | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHDLIKP*VTESRV Trigger: GACACGACTTTCTGTGACCCAAGGTTTTATCAGATC...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CTTACCCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAAAACCACATGGTAGATaGCTTGATGCTGATTGTGTG | + |
Preference number: 4 (lower is better) Translates to: LTHNLLSTVSLAYLALVQKPHGR*LDADCV Trigger: CACACAATCAGCATCAAGCCATCTACCATGTGGTTT...TTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGGGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR CCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATAAACCACATGGTAGATaGCTTGATGCTGATTGTGTG | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHKPHGR*LDADCV Trigger: CACACAATCAGCATCAAGCCATCTACCATGTGGTTT...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGAAGCGGTTTGTACTTTaGCTCAACACTTTGGGGAGA | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRKRFVL*LNTLGR Trigger: TCTCCCCAAAGTGTTGAGCCAAAGTACAAACCGCTT...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | AAATCCCAGCAACCACATGGTGGCTCACAACCATCTTTAATGAGATCTGACGTCCAAGATGGATTGTTCTaGCTCTCTTCAATTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: KSQQPHGGSQPSLMRSDVQDGLF*LSSIFQ Trigger: TTGGAAAATTGAAGAGAGCCAGAACAATCCATCTTG...GACGTCAGATCTCATTAAAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR CCA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGCAAGATGGATTGTTCTaGCTCTCTTCAATTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQQDGLF*LSSIFQ Trigger: TTGGAAAATTGAAGAGAGCCAGAACAATCCATCTTG...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGCCACCACTTTTCTCTTaGGAAGATAACAAAACAGTA | + |
Preference number: 4 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQPPLFS*EDNKTV Trigger: TACTGTTTTGTTATCTTCCCAAGAGAAAAGTGGTGG...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCATCTAAATACACACTTTaGATGTCTTTTACTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: QQNEFRIAQGVHRETLSPSKYTL*MSFTLQ Trigger: CTGGAGAGTAAAAGACATCCAAAGTGTGTATTTAGA...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGATCTTCAGACTCCATTaGCCACAGCCTTTCATCTTT | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRIFRLH*PQPFIF Trigger: AAAGATGAAAGGCTGTGGTCAATGGAGTCTGAAGAT...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGGCTGATTGTGTGGAGTaGAGTTTTGTTTTGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRADCVE*SFVLGS Trigger: ACTTCCCAAAACAAAACTGCACTCCACACAATCAGC...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTTGGTACGGAACTTTGTaGCTTAAAGGTGTCGGTAGA | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFWYGTL*LKGVGR Trigger: TCTACCGACACCTTTAAGGCACAAAGTTCCGTACCA...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR GCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACGTAAAGATTTGTGTGTaGGCATGTGAATGCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNVKICV*ACECRC Trigger: GCACCTGCATTCACATGCGCACACACAAATCTTTAC...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATTTGATGCTGATTGTGTaGAGTGCAGTTTTGTTTTGG | + |
Preference number: 4 (lower is better) Translates to: LDFSMNVIMAGILTSAYHLMLIV*SAVLFW Trigger: CCAAAACAAAACTGCACTCCACACAATCAGCATCAA...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTAAGCGGTTTGTACTTTaGCTCAACACTTTGGGGAGA | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFKRFVL*LNTLGR Trigger: TCTCCCCAAAGTGTTGAGCCAAAGTACAAACCGCTT...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR TCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACATCTTCAGACTCCATTaGCCACAGCCTTTCATCTTT | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNIFRLH*PQPFIF Trigger: AAAGATGAAAGGCTGTGGTCAATGGAGTCTGAAGAT...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGAGTGCAGTTTTGTTTTaGGAAGTTATACCACAGGGT | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRSAVLF*EVIPQG Trigger: ACCCTGTGGTATAACTTCCCAAAACAAAACTGCACT...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGTTGATGCTGATTGTGTaGAGTGCAGTTTTGTTTTGG | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRLMLIV*SAVLFW Trigger: CCAAAACAAAACTGCACTCCACACAATCAGCATCAA...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACAACTGGGATGACATTTaGATACACATTCACTGGGCA | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNNWDDI*IHIHWA Trigger: TGCCCAGTGAATGTGTATCCAAATGTCATCCCAGTT...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTAACTGGGATGACATTTaGATACACATTCACTGGGCA | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFNWDDI*IHIHWA Trigger: TGCCCAGTGAATGTGTATCCAAATGTCATCCCAGTT...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | CCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAAAATATGTATTTCCAGGTTCTaGAGAAGCATCTTCAGACTC | + |
Preference number: 4 (lower is better) Translates to: PQFTFHSFTCLLSSGPKICISRF*RSIFRL Trigger: GAGTCTGAAGATGCTTCTCCAGAACCTGGAAATACA...TATTTTTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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3UTR CAA 72 bp | AGCTATGGATATTGCCCAGGACTTTTATGTATAGCATaGTATTGCAACATCGAAAGGCTGGACATCTTTGCT | + |
Preference number: 4 (lower is better) Translates to: SYGYCPGLLCIA*YCNIERLDIFA Trigger: AGCAAAGATGTCCAGCCTTTCGATGTTGCAATACAATGCTATACATAAAAGTCCTGGGCAATATCCATAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CCA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTAGTGCAGTTTTGTTTTaGGAAGTTATACCACAGGGT | + |
Preference number: 4 (lower is better) Translates to: STEADQQNKLCVERIKIFSAVLF*EVIPQG Trigger: ACCCTGTGGTATAACTTCCCAAAACAAAACTGCACT...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACTGGATACACATTCACTaGGCAGATGTAGCTCAAAAA | + |
Preference number: 4 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNWIHIH*ADVAQK Trigger: TTTTTGAGCTACATCTGCCCAGTGAATGTGTATCCA...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CCA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGCAAGATGGATTGTTCTaGCTCTCTTCAATTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRQDGLF*LSSIFQ Trigger: TTGGAAAATTGAAGAGAGCCAGAACAATCCATCTTG...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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3UTR CAA 72 bp | TTCATCATTCAAGTACCAGGCAATAAGGGCAGGAGGTaGGTACTATCATCATTTTATATCTACATGACAGAT | + |
Preference number: 4 (lower is better) Translates to: FIIQVPGNKGRR*VLSSFYIYMTD Trigger: ATCTGTCATGTAGATATAAAATGATGATAGTACCAACCTCCTGCCCTTATTGCCTGGTACTTGAATGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS CCA 90 bp | AAGACTTCCCACTGTGGTATGTCCACATCCGGATCAGCATTTTGCTaGACGAGTGTCGAGGGGCCCAGACCTCCCTGCAGTGAGGGTGGT | + |
Preference number: 5 (lower is better) Translates to: KTSHCGMSTSGSAFC*TSVEGPRPPCSEGG Trigger: ACCACCCTCACTGCAGGGAGGTCTGGGCCCCTCGACACTCGTCCAGCAAAATGCTGATCCGGATGTGGACATACCACAGTGGGAAGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | GGTCATAAGGACAGCAGCGCGGGTAATGTGGTGACAGGGATGGGCCTGGATGTCCACACACTCTCTGCTTaGCAGCCTCCTGGGCTTTGT | + |
Preference number: 5 (lower is better) Translates to: GHKDSSAGNVVTGMGLDVHTLSA*QPPGLC Trigger: ACAAAGCCCAGGAGGCTGCAAAGCAGAGAGTGTGTG...GACATCCAGGCCCATCCCTGTCACCACATTACCCGCGCTGCTGTCCTTATGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS GCA 90 bp | AAGAAGACTTCCCACTGTGGTATGTCCACATCCGGATCAGCATTTTaGTGGACGAGTGTCGAGGGGCCCAGACCTCCCTGCAGTGAGGGT | + |
Preference number: 5 (lower is better) Translates to: KKTSHCGMSTSGSAF*WTSVEGPRPPCSEG Trigger: ACCCTCACTGCAGGGAGGTCTGGGCCCCTCGACACTCGTCCAGCAAAATGCTGATCCGGATGTGGACATACCACAGTGGGAAGTCTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CCA 90 bp | GGAAGTAGGCACGGGCTTTCAGGTTCTCCCTGTCGAAGCGGTCAATaGAGATGGTTGGATACTCCGCCATCTGTCCCTGGAAGGAGCTCA | + |
Preference number: 5 (lower is better) Translates to: GSRHGLSGSPCRSGQ*RWLDTPPSVPGRSS Trigger: TGAGCTCCTTCCAGGGACAGATGGCGGAGTATCCAACCATCTCCATTGACCGCTTCGACAGGGAGAACCTGAAAGCCCGTGCCTACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | GTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACGCAGCCTCCTGGGCTTaGTCTCAGTTCAGGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: VCLPSRPHTSTAMDIAQDAASWA*SQFRLV Trigger: GACCAGCCTGAACTGAGACAAAGCCCAGGAGGCTGC...GTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAAAACACTCTTCTGCCTTaGGGTGGCGGCAGGCGTGGA | + |
Preference number: 5 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQNTLLP*GGGRRG Trigger: TCCACGCCTGCCGCCACCCAAAGGCAGAAGAGTGTT...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | GGTCATAAGGACAGCAGCGCGGGTAATGTGGTGACAGGGATGGGCCTGGATGTCGTGGCAGTGCCTTCATaGAAAACAGCTCAGGCTGAA | + |
Preference number: 5 (lower is better) Translates to: GHKDSSAGNVVTGMGLDVVAVPS*KTAQAE Trigger: TTCAGCCTGAGCTGTTTTCAATGAAGGCACTGCCAC...GACATCCAGGCCCATCCCTGTCACCACATTACCCGCGCTGCTGTCCTTATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS TCA 90 bp | ATGGAGGCCAGAAGCTGGAGTTTGAGGCTAGGGAGGTGGCTAGCTTaGATGTTGGGAGTGAACTCTGGCCCTCCAAAAGACCACAGCTAC | + |
Preference number: 5 (lower is better) Translates to: MEARSWSLRLGRWLA*MLGVNSGPPKDHSY Trigger: GTAGCTGTGGTCTTTTGGAGGGCCAGAGTTCACTCCCAACATTCAAGCTAGCCACCTCCCTAGCCTCAAACTCCAGCTTCTGGCCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS-3UTR CAA 90 bp | GTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACCACACACTCTCTGCTTaGCAGCCTCCTGGGCTTTGT | + |
Preference number: 5 (lower is better) Translates to: VCLPSRPHTSTAMDIAQDHTLSA*QPPGLC Trigger: ACAAAGCCCAGGAGGCTGCAAAGCAGAGAGTGTGTG...GTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS GCA 90 bp | CACTGCAGAGCTTTGGTGAGTCACTGCAGAGCTTTGGTGAGTCACTaGAGAGCTTTGGTGACTGAGATCCCCCTGTCTCTATGGAGGAAG | + |
Preference number: 5 (lower is better) Translates to: HCRALVSHCRALVSH*RALVTEIPLSLWRK Trigger: CTTCCTCCATAGAGACAGGGGGATCTCAGTCACCAAAGCTCTGCAGTGACTCACCAAAGCTCTGCAGTGACTCACCAAAGCTCTGCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS GCA 90 bp | AGGGGATTTCAAAGTCAGAGGAGCTCTGTGAGTCTGCACGTGTGCTaGTTAGCAATGTCTTCTCAGGTGGAGACTTCCTGCCACTCAGGG | + |
Preference number: 5 (lower is better) Translates to: RGFQSQRSSVSLHVC*LAMSSQVETSCHSG Trigger: CCCTGAGTGGCAGGAAGTCTCCACCTGAGAAGACATTGCTAAGCAGCACACGTGCAGACTCACAGAGCTCCTCTGACTTTGAAATCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | ACAAGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCACTTTGGCTCAACACTTaGGGGAGACCGGCACAGAGG | + |
Preference number: 5 (lower is better) Translates to: TSVSTLQATYIHSYGYCPLWLNT*GRPAQR Trigger: CCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAAG...TGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGAGGTCAATGGAGATGGTaGGATACTCCGCCATCTGTC | + |
Preference number: 5 (lower is better) Translates to: SVSTLQATYIHSYGYCPGGQWRW*DTPPSV Trigger: GACAGATGGCGGAGTATCCAACCATCTCCATTGACC...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGAACACTCTTCTGCCTTaGGGTGGCGGCAGGCGTGGA | + |
Preference number: 5 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQNTLLP*GGGRRG Trigger: TCCACGCCTGCCGCCACCCAAAGGCAGAAGAGTGTT...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | GTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACGTGGCAGTGCCTTCATaGAAAACAGCTCAGGCTGAA | + |
Preference number: 5 (lower is better) Translates to: VCLPSRPHTSTAMDIAQDVAVPS*KTAQAE Trigger: TTCAGCCTGAGCTGTTTTCAATGAAGGCACTGCCAC...GTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTAGTCACTGCAGAGCTTaGGTGACTGAGATCCCCCTG | + |
Preference number: 5 (lower is better) Translates to: VYPPGHIHPQLWILPRTFSHCRA*VTEIPL Trigger: CAGGGGGATCTCAGTCACCAAAGCTCTGCAGTGACT...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS GCA 90 bp | GGGAGTGAACTCTGGCCCTCCAAAAGACCACAGCTACCCTTTACCTaGCCAGCCATCTTCCAGCCCCTGTTCTCAAATATATGTTTCTCT | + |
Preference number: 5 (lower is better) Translates to: GSELWPSKRPQLPFT*PAIFQPLFSNICFS Trigger: AGAGAAACATATATTTGAGAACAGGGGCTGGAAGATGGCTGGGCAGGTAAAGGGTAGCTGTGGTCTTTTGGAGGGCCAGAGTTCACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS GCA 90 bp | TTGAGGGGATTTCAAAGTCAGAGGAGCTCTGTGAGTCTGCACGTGTaGTGCTTAGCAATGTCTTCTCAGGTGGAGACTTCCTGCCACTCA | + |
Preference number: 5 (lower is better) Translates to: LRGFQSQRSSVSLHV*CLAMSSQVETSCHS Trigger: TGAGTGGCAGGAAGTCTCCACCTGAGAAGACATTGCTAAGCAGCACACGTGCAGACTCACAGAGCTCCTCTGACTTTGAAATCCCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAAAGCTGGTACGGAACTTaGTGCCTTAAAGGTGTCGGT | + |
Preference number: 5 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQSWYGT*CLKGVG Trigger: ACCGACACCTTTAAGGCACAAAGTTCCGTACCAGCT...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAAGTGGCAGTGCCTTCATaGAAAACAGCTCAGGCTGAA | + |
Preference number: 5 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQVAVPS*KTAQAE Trigger: TTCAGCCTGAGCTGTTTTCAATGAAGGCACTGCCAC...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | GTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTCTCCACTGTCGCTGTaGGATTCTTCACAGTCTATG | + |
Preference number: 5 (lower is better) Translates to: VCLPSRPHTSTAMDIAQDSPLSL*DSSQSM Trigger: CATAGACTGTGAAGAATCCAACAGCGACAGTGGAGA...GTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS TCA 90 bp | TCAGGCTGGTCTAGTGGCAGTGCCTTCATTGAAAACAGCTCAGGCTaGAGAGTTAGCTGGTACGGAACTTTGTGCCTTAAAGGTGTCGGT | + |
Preference number: 5 (lower is better) Translates to: SGWSSGSAFIENSSG*RVSWYGTLCLKGVG Trigger: ACCGACACCTTTAAGGCACAAAGTTCCGTACCAGCTAACTCTTCAGCCTGAGCTGTTTTCAATGAAGGCACTGCCACTAGACCAGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS TCA 90 bp | GAGTCACTGCAGAGCTTTGGTGAGTCACTGCAGAGCTTTGGTGACTaGGATCCCCCTGTCTCTATGGAGGAAGGTAAGTGTTCCAAACAT | + |
Preference number: 5 (lower is better) Translates to: ESLQSFGESLQSFGD*DPPVSMEEGKCSKH Trigger: ATGTTTGGAACACTTACCTTCCTCCATAGAGACAGGGGGATCTCAGTCACCAAAGCTCTGCAGTGACTCACCAAAGCTCTGCAGTGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS GCA 90 bp | ATGAATTCTGGGAAGAGATATGGGTGGAGTCTCCATCAGAGTCACTaGAGAGCTTTGGTGAGTCACTGCAGAGCTTTGGTGAGTCACTGC | + |
Preference number: 5 (lower is better) Translates to: MNSGKRYGWSLHQSH*RALVSHCRALVSHC Trigger: GCAGTGACTCACCAAAGCTCTGCAGTGACTCACCAAAGCTCTGCAGTGACTCTGATGGAGACTCCACCCATATCTCTTCCCAGAATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | GTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACGAGTGCAGTTTTGTTTaGGGAAGTTATACCACAGGG | + |
Preference number: 5 (lower is better) Translates to: VCLPSRPHTSTAMDIAQDECSFV*GSYTTG Trigger: CCCTGTGGTATAACTTCCCAAAACAAAACTGCACTC...GTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACACATGGTAGATGGCTaGATGCTGATTGTGTGGAGT | + |
Preference number: 5 (lower is better) Translates to: SVSTLQATYIHSYGYCPGHMVDG*MLIVWS Trigger: ACTCCACACAATCAGCATCAAGCCATCTACCATGTG...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAACACATGGTAGATGGCTaGATGCTGATTGTGTGGAGT | + |
Preference number: 5 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQHMVDG*MLIVWS Trigger: ACTCCACACAATCAGCATCAAGCCATCTACCATGTG...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | ACAAGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCACTGGCTGTCCCAGCCTaGACTTCCTTGATCTGTTAT | + |
Preference number: 5 (lower is better) Translates to: TSVSTLQATYIHSYGYCPLAVPA*TSLICY Trigger: ATAACAGATCAAGGAAGTCAAGGCTGGGACAGCCAG...TGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | TTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGGCCACATACATCCACGCTCCGCTTCGGGAGTaGAGGGGATTTCAAAGTCAG | + |
Preference number: 5 (lower is better) Translates to: FLVVDLTSVSTLQATYIHAPLRE*RGFQSQ Trigger: CTGACTTTGAAATCCCCTCAACTCCCGAAGCGGAGC...GTGGATGTATGTGGCCTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS TCA 90 bp | GCAGTTTTGTTTTGGGAAGTTATACCACAGGGTAGTTTATTCCACTaGAAACACTCTTCTGCCTTTGGGTGGCGGCAGGCGTGGATCTGG | + |
Preference number: 5 (lower is better) Translates to: AVLFWEVIPQGSLFH*KHSSAFGWRQAWIW Trigger: CCAGATCCACGCCTGCCGCCACCCAAAGGCAGAAGAGTGTTTTCAGTGGAATAAACTACCCTGTGGTATAACTTCCCAAAACAAAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS-3UTR CAA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATCTTTGGCTCAACACTTaGGGGAGACCGGCACAGAGG | + |
Preference number: 5 (lower is better) Translates to: LDFSMNVIMAGILTSAYHLWLNT*GRPAQR Trigger: CCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAAG...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | TCAGACTCAGAGATCCACCTGCCTTGCCTCTACCTCCCAAGTGCTGAGATTCAACCGAGTCAAGATGGATaGTTCTGGCTCTCTTCAATT | + |
Preference number: 5 (lower is better) Translates to: SDSEIHLPCLYLPSAEIQPSQDG*FWLSSI Trigger: AATTGAAGAGAGCCAGAACAATCCATCTTGACTCGG...TTGAATCTCAGCACTTGGGAGGTAGAGGCAAGGCAGGTGGATCTCTGAGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | CTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTATAGCTGGTACGGAACTTaGTGCCTTAAAGGTGTCGGT | + |
Preference number: 5 (lower is better) Translates to: LPSRPHTSTAMDIAQDFYSWYGT*CLKGVG Trigger: ACCGACACCTTTAAGGCACAAAGTTCCGTACCAGCT...ATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGGCAGCCTCCTGGGCTTaGTCTCAGTTCAGGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRAASWA*SQFRLV Trigger: GACCAGCCTGAACTGAGACAAAGCCCAGGAGGCTGC...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS CCA 90 bp | GCTCTCTTCAATTTTCCAAGCGGTTTGTACTTTGGCTCAACACTTTaGGGAGACCGGCACAGAGGCTTTAAAACGTCCATGACCTTATCC | + |
Preference number: 5 (lower is better) Translates to: ALFNFPSGLYFGSTL*GDRHRGFKTSMTLS Trigger: GGATAAGGTCATGGACGTTTTAAAGCCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAAGTACAAACCGCTTGGAAAATTGAAGAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS CCA 90 bp | CTGTTATATGGGTTGACTGAGATGAATTCTGGGAAGAGATATGGGTaGAGTCTCCATCAGAGTCACTGCAGAGCTTTGGTGAGTCACTGC | + |
Preference number: 5 (lower is better) Translates to: LLYGLTEMNSGKRYG*SLHQSHCRALVSHC Trigger: GCAGTGACTCACCAAAGCTCTGCAGTGACTCTGATGGAGACTCCACCCATATCTCTTCCCAGAATTCATCTCAGTCAACCCATATAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCACACATGGTAGATGGCTaGATGCTGATTGTGTGGAGT | + |
Preference number: 5 (lower is better) Translates to: QQNEFRIAQGVHRETLSPHMVDG*MLIVWS Trigger: ACTCCACACAATCAGCATCAAGCCATCTACCATGTG...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGCTTTGGCTCAACACTTaGGGGAGACCGGCACAGAGG | + |
Preference number: 5 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRLWLNT*GRPAQR Trigger: CCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAAG...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACGCAGCCTCCTGGGCTTaGTCTCAGTTCAGGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNAASWA*SQFRLV Trigger: GACCAGCCTGAACTGAGACAAAGCCCAGGAGGCTGC...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGAGATCTGTTATATGGGTaGACTGAGATGAATTCTGGG | + |
Preference number: 5 (lower is better) Translates to: SVSTLQATYIHSYGYCPGDLLYG*TEMNSG Trigger: CCCAGAATTCATCTCAGTCAACCCATATAACAGATC...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | AGTGTGTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGATGCATCCTGTTCTATTaGAGAGGCAGAAATACTCTC | + |
Preference number: 5 (lower is better) Translates to: SVSTLQATYIHSYGYCPGCILFY*RGRNTL Trigger: GAGAGTATTTCTGCCTCTCAAATAGAACAGGATGCA...TCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGACACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS CCA 90 bp | GTCCACTGTGATTTCATCTCTTCTTTTGAAGAAGACTTCCCACTGTaGTATGTCCACATCCGGATCAGCATTTTGCTGGACGAGTGTCGA | + |
Preference number: 5 (lower is better) Translates to: VHCDFISSFEEDFPL*YVHIRISILLDECR Trigger: TCGACACTCGTCCAGCAAAATGCTGATCCGGATGTGGACATACCACAGTGGGAAGTCTTCTTCAAAAGAAGAGATGAAATCACAGTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAAACACTGCTCACGACTaGGGATCTGATAAAACCTTG | + |
Preference number: 5 (lower is better) Translates to: QQNEFRIAQGVHRETLSPNTAHD*GSDKTL Trigger: CAAGGTTTTATCAGATCCCAAGTCGTGAGCAGTGTT...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTCTTTGGCTCAACACTTaGGGGAGACCGGCACAGAGG | + |
Preference number: 5 (lower is better) Translates to: STEADQQNKLCVERIKIFLWLNT*GRPAQR Trigger: CCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAAG...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCACATCTTCAGACTCCATaGACCACAGCCTTTCATCTT | + |
Preference number: 5 (lower is better) Translates to: QQNEFRIAQGVHRETLSPHLQTP*TTAFHL Trigger: AAGATGAAAGGCTGTGGTCAATGGAGTCTGAAGATG...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | GTCTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTCTATACTTTGACCTGTaGCCAGTTTCCTGTATAAGC | + |
Preference number: 5 (lower is better) Translates to: VYPPGHIHPQLWILPRTFLYFDL*PVSCIS Trigger: GCTTATACAGGAAACTGGCAACAGGTCAAAGTATAG...AAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS GCA 90 bp | GGGTGTCTAGTTCTACAAGACAAGGGGCTCCATTTACTTCAGCTCTaGTTTTCAAATCACAGTGAGTATCTTGTGGACACAGTGCATCCT | + |
Preference number: 5 (lower is better) Translates to: GCLVLQDKGLHLLQL*FSNHSEYLVDTVHP Trigger: AGGATGCACTGTGTCCACAAGATACTCACTGTGATTTGAAAAGCAGAGCTGAAGTAAATGGAGCCCCTTGTCTTGTAGAACTAGACACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS CCA 90 bp | TTCACCTGTGATTTCATCTCTTCTTTTGAAGAAGACTTCCCACTGTaGTATGTCCACATCCGGATCAGCATTTTGCTGGACGAGTGTCGA | + |
Preference number: 5 (lower is better) Translates to: FTCDFISSFEEDFPL*YVHIRISILLDECR Trigger: TCGACACTCGTCCAGCAAAATGCTGATCCGGATGTGGACATACCACAGTGGGAAGTCTTCTTCAAAAGAAGAGATGAAATCACAGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | TTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGGCCACATACATCCACAACACTGCTCACGACTaGGGATCTGATAAAACCTTG | + |
Preference number: 5 (lower is better) Translates to: FLVVDLTSVSTLQATYIHNTAHD*GSDKTL Trigger: CAAGGTTTTATCAGATCCCAAGTCGTGAGCAGTGTT...GTGGATGTATGTGGCCTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | CTACCCTCCAGGCCACATACATCCACAGCTATGGATATTGCCCAGGACTTTTATGTGTGGAGTGCAGTTTaGTTTTGGGAAGTTATACCA | + |
Preference number: 5 (lower is better) Translates to: LPSRPHTSTAMDIAQDFYVWSAV*FWEVIP Trigger: TGGTATAACTTCCCAAAACAAAACTGCACTCCACAC...ATAAAAGTCCTGGGCAATATCCATAGCTGTGGATGTATGTGGCCTGGAGGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | CAACAGAATGAGTTCAGGATAGCACAAGGGGTACACAGAGAAACCCTGTCTCCAGTGTGGAGTGCAGTTTaGTTTTGGGAAGTTATACCA | + |
Preference number: 5 (lower is better) Translates to: QQNEFRIAQGVHRETLSPVWSAV*FWEVIP Trigger: TGGTATAACTTCCCAAAACAAAACTGCACTCCACAC...TGGAGACAGGGTTTCTCTGTGTACCCCTTGTGCTATCCTGAACTCATTCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGCCGAGTCAAGATGGATaGTTCTGGCTCTCTTCAATT | + |
Preference number: 5 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQPSQDG*FWLSSI Trigger: AATTGAAGAGAGCCAGAACAATCCATCTTGACTCGG...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATAGCTGGTACGGAACTTaGTGCCTTAAAGGTGTCGGT | + |
Preference number: 5 (lower is better) Translates to: LDFSMNVIMAGILTSAYHSWYGT*CLKGVG Trigger: ACCGACACCTTTAAGGCACAAAGTTCCGTACCAGCT...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTCACACACTCTCTGCTTaGCAGCCTCCTGGGCTTTGT | + |
Preference number: 5 (lower is better) Translates to: STEADQQNKLCVERIKIFHTLSA*QPPGLC Trigger: ACAAAGCCCAGGAGGCTGCAAAGCAGAGAGTGTGTG...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS CCA 90 bp | CATCAAAGAGATCATCGTCTTCCTCCGAGTCAAGATGGATTGTTCTaGCTCTCTTCAATTTTCCAAGCGGTTTGTACTTTGGCTCAACAC | + |
Preference number: 5 (lower is better) Translates to: HQRDHRLPPSQDGLF*LSSIFQAVCTLAQH Trigger: GTGTTGAGCCAAAGTACAAACCGCTTGGAAAATTGAAGAGAGCCAGAACAATCCATCTTGACTCGGAGGAAGACGATGATCTCTTTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CCA 90 bp | GGTAGAGGGTCATCAAAGAGATCATCGTCTTCCTCCGAGTCAAGATaGATTGTTCTGGCTCTCTTCAATTTTCCAAGCGGTTTGTACTTT | + |
Preference number: 5 (lower is better) Translates to: GRGSSKRSSSSSESR*IVLALFNFPSGLYF Trigger: AAAGTACAAACCGCTTGGAAAATTGAAGAGAGCCAGAACAATCCATCTTGACTCGGAGGAAGACGATGATCTCTTTGATGACCCTCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTGGTCAATGGAGATGGTaGGATACTCCGCCATCTGTC | + |
Preference number: 5 (lower is better) Translates to: STEADQQNKLCVERIKIFGQWRW*DTPPSV Trigger: GACAGATGGCGGAGTATCCAACCATCTCCATTGACC...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR CAA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACGGTCAATGGAGATGGTaGGATACTCCGCCATCTGTC | + |
Preference number: 5 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNGQWRW*DTPPSV Trigger: GACAGATGGCGGAGTATCCAACCATCTCCATTGACC...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 |
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CDS-3UTR CAA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGTTCGACAACTATACTTaGACCTGTTGCCAGTTTCCT | + |
Preference number: 5 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQFDNYT*TCCQFP Trigger: AGGAAACTGGCAACAGGTCAAAGTATAGTTGTCGAA...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATAACACTGCTCACGACTaGGGATCTGATAAAACCTTG | + |
Preference number: 5 (lower is better) Translates to: LDFSMNVIMAGILTSAYHNTAHD*GSDKTL Trigger: CAAGGTTTTATCAGATCCCAAGTCGTGAGCAGTGTT...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATCCGAGTCAAGATGGATaGTTCTGGCTCTCTTCAATT | + |
Preference number: 5 (lower is better) Translates to: LDFSMNVIMAGILTSAYHPSQDG*FWLSSI Trigger: AATTGAAGAGAGCCAGAACAATCCATCTTGACTCGG...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGTCTCCACTGTCGCTGTaGGATTCTTCACAGTCTATG | + |
Preference number: 5 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRSPLSL*DSSQSM Trigger: CATAGACTGTGAAGAATCCAACAGCGACAGTGGAGA...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS TCA 90 bp | GACACAGTGCATCCTGTTCTATTTGAGAGGCAGAAATACTCTCTTTaGGTTTTGGTTTGTAGGCACCCTTGTTTAAAGAGGTACTATCCC | + |
Preference number: 5 (lower is better) Translates to: DTVHPVLFERQKYSL*VLVCRHPCLKRYYP Trigger: GGGATAGTACCTCTTTAAACAAGGGTGCCTACAAACCAAAACTCAAAGAGAGTATTTCTGCCTCTCAAATAGAACAGGATGCACTGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGGGATCTGATAAAACCTaGGGTCACAGAAAGTCGTGT | + |
Preference number: 5 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRGSDKT*GHRKSC Trigger: ACACGACTTTCTGTGACCCAAGGTTTTATCAGATCC...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGGAGTGCAGTTTTGTTTaGGGAAGTTATACCACAGGG | + |
Preference number: 5 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRECSFV*GSYTTG Trigger: CCCTGTGGTATAACTTCCCAAAACAAAACTGCACTC...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATGTGTGGAGTGCAGTTTaGTTTTGGGAAGTTATACCA | + |
Preference number: 5 (lower is better) Translates to: LDFSMNVIMAGILTSAYHVWSAV*FWEVIP Trigger: TGGTATAACTTCCCAAAACAAAACTGCACTCCACAC...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | CCACAATTTACTTTCCACAGTTTCACTTGCCTACTTAGCTCTGGTCCAAAAATACACATGGTAGATGGCTaGATGCTGATTGTGTGGAGT | + |
Preference number: 5 (lower is better) Translates to: PQFTFHSFTCLLSSGPKIHMVDG*MLIVWS Trigger: ACTCCACACAATCAGCATCAAGCCATCTACCATGTG...TATTTTTGGACCAGAGCTAAGTAGGCAAGTGAAACTGTGGAAAGTAAATTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061852.12 |
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CDS-3UTR CAA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACTCTCCACTGTCGCTGTaGGATTCTTCACAGTCTATG | + |
Preference number: 5 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNSPLSL*DSSQSM Trigger: CATAGACTGTGAAGAATCCAACAGCGACAGTGGAGA...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | GTGTCACTCTGCAGATTTCTTGTGGTTGATCTAACAAGTGTGTCTACCCTCCAGATTTCATCTCTTCTTTaGAAGAAGACTTCCCACTGT | + |
Preference number: 5 (lower is better) Translates to: VSLCRFLVVDLTSVSTLQISSLL*KKTSHC Trigger: ACAGTGGGAAGTCTTCTTCAAAAGAAGAGATGAAAT...CTGGAGGGTAGACACACTTGTTAGATCAACCACAAGAAATCTGCAGAGTGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS-3UTR CAA 90 bp | TGTGACCCAAATCTTCAGGTGTTTAGTGTTTTCATCGATAACCTTGATACTCGGCATCTTCAGACTCCATaGACCACAGCCTTTCATCTT | + |
Preference number: 5 (lower is better) Translates to: CDPNLQVFSVFIDNLDTRHLQTP*TTAFHL Trigger: AAGATGAAAGGCTGTGGTCAATGGAGTCTGAAGATG...CCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAGATTTGGGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTGGATCTGATAAAACCTaGGGTCACAGAAAGTCGTGT | + |
Preference number: 5 (lower is better) Translates to: STEADQQNKLCVERIKIFGSDKT*GHRKSC Trigger: ACACGACTTTCTGTGACCCAAGGTTTTATCAGATCC...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACAACACTGCTCACGACTaGGGATCTGATAAAACCTTG | + |
Preference number: 5 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNNTAHD*GSDKTL Trigger: CAAGGTTTTATCAGATCCCAAGTCGTGAGCAGTGTT...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTGAGTGCAGTTTTGTTTaGGGAAGTTATACCACAGGG | + |
Preference number: 5 (lower is better) Translates to: STEADQQNKLCVERIKIFECSFV*GSYTTG Trigger: CCCTGTGGTATAACTTCCCAAAACAAAACTGCACTC...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | AGTACGGAGGCGGATCAACAAAACAAACTATGTGTGGAGAGGATAAAAATCTTTCATCTTCAGACTCCATaGACCACAGCCTTTCATCTT | + |
Preference number: 5 (lower is better) Translates to: STEADQQNKLCVERIKIFHLQTP*TTAFHL Trigger: AAGATGAAAGGCTGTGGTCAATGGAGTCTGAAGATG...AAAGATTTTTATCCTCTCCACACATAGTTTGTTTTGTTGATCCGCCTCCGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | TCATTCCAGCACTTGCTGCAGATACAACATTCTTACAAGTTCCTTACATTCAACGTGTGGAGTGCAGTTTaGTTTTGGGAAGTTATACCA | + |
Preference number: 5 (lower is better) Translates to: SFQHLLQIQHSYKFLTFNVWSAV*FWEVIP Trigger: TGGTATAACTTCCCAAAACAAAACTGCACTCCACAC...GTTGAATGTAAGGAACTTGTAAGAATGTTGTATCTGCAGCAAGTGCTGGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS-3UTR CAA 90 bp | CTGGATTTCTCAATGAATGTCATCATGGCAGGCATTCTGACTAGTGCATACCATATTTCATCTCTTCTTTaGAAGAAGACTTCCCACTGT | + |
Preference number: 5 (lower is better) Translates to: LDFSMNVIMAGILTSAYHISSLL*KKTSHC Trigger: ACAGTGGGAAGTCTTCTTCAAAAGAAGAGATGAAAT...ATGGTATGCACTAGTCAGAATGCCTGCCATGATGACATTCATTGAGAAATCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS GCA 72 bp | TCCCACTGTGGTATGTCCACATCCGGATCAGCATTTTaGTGGACGAGTGTCGAGGGGCCCAGACCTCCCTGC | + |
Preference number: 6 (lower is better) Translates to: SHCGMSTSGSAF*WTSVEGPRPPC Trigger: GCAGGGAGGTCTGGGCCCCTCGACACTCGTCCAGCAAAATGCTGATCCGGATGTGGACATACCACAGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CCA 72 bp | CACGGGCTTTCAGGTTCTCCCTGTCGAAGCGGTCAATaGAGATGGTTGGATACTCCGCCATCTGTCCCTGGA | + |
Preference number: 6 (lower is better) Translates to: HGLSGSPCRSGQ*RWLDTPPSVPG Trigger: TCCAGGGACAGATGGCGGAGTATCCAACCATCTCCATTGACCGCTTCGACAGGGAGAACCTGAAAGCCCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 |
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CDS CCA 72 bp | CAGGTTCTCCCTGTCGAAGCGGTCAATGGAGATGGTTaGATACTCCGCCATCTGTCCCTGGAAGGAGCTCAT | + |
Preference number: 6 (lower is better) Translates to: QVLPVEAVNGDG*ILRHLSLEGAH Trigger: ATGAGCTCCTTCCAGGGACAGATGGCGGAGTATCCAACCATCTCCATTGACCGCTTCGACAGGGAGAACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 |
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CDS CCA 72 bp | CTTTCAGGTTCTCCCTGTCGAAGCGGTCAATGGAGATaGTTGGATACTCCGCCATCTGTCCCTGGAAGGAGC | + |
Preference number: 6 (lower is better) Translates to: LSGSPCRSGQWR*LDTPPSVPGRS Trigger: GCTCCTTCCAGGGACAGATGGCGGAGTATCCAACCATCTCCATTGACCGCTTCGACAGGGAGAACCTGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 |
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CDS CAA 72 bp | TCAGGTTCTCCCTGTCGAAGCGGTCAATGGAGATGGTaGGATACTCCGCCATCTGTCCCTGGAAGGAGCTCA | + |
Preference number: 6 (lower is better) Translates to: SGSPCRSGQWRW*DTPPSVPGRSS Trigger: TGAGCTCCTTCCAGGGACAGATGGCGGAGTATCCAACCATCTCCATTGACCGCTTCGACAGGGAGAACCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 |
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CDS CAA 90 bp | CATGGAGGCCAGAAGCTGGAGTTTGAGGCTAGGGAGGTGGCTAGCTaGAATGTTGGGAGTGAACTCTGGCCCTCCAAAAGACCACAGCTA | + |
Preference number: 6 (lower is better) Translates to: HGGQKLEFEAREVAS*NVGSELWPSKRPQL Trigger: TAGCTGTGGTCTTTTGGAGGGCCAGAGTTCACTCCCAACATTCAAGCTAGCCACCTCCCTAGCCTCAAACTCCAGCTTCTGGCCTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS GCA 72 bp | GGGAAGAGATATGGGTGGAGTCTCCATCAGAGTCACTaGAGAGCTTTGGTGAGTCACTGCAGAGCTTTGGTG | + |
Preference number: 6 (lower is better) Translates to: GKRYGWSLHQSH*RALVSHCRALV Trigger: CACCAAAGCTCTGCAGTGACTCACCAAAGCTCTGCAGTGACTCTGATGGAGACTCCACCCATATCTCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS GCA 72 bp | CAAAGTCAGAGGAGCTCTGTGAGTCTGCACGTGTGCTaGTTAGCAATGTCTTCTCAGGTGGAGACTTCCTGC | + |
Preference number: 6 (lower is better) Translates to: QSQRSSVSLHVC*LAMSSQVETSC Trigger: GCAGGAAGTCTCCACCTGAGAAGACATTGCTAAGCAGCACACGTGCAGACTCACAGAGCTCCTCTGACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS CCA 72 bp | GCTTTGCAGCCTCCTGGGCTTTGTCTCAGTTCAGGCTaGTCTAGTGGCAGTGCCTTCATTGAAAACAGCTCA | + |
Preference number: 6 (lower is better) Translates to: ALQPPGLCLSSG*SSGSAFIENSS Trigger: TGAGCTGTTTTCAATGAAGGCACTGCCACTAGACCAGCCTGAACTGAGACAAAGCCCAGGAGGCTGCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CAA 72 bp | CAGAAGCTGGAGTTTGAGGCTAGGGAGGTGGCTAGCTaGAATGTTGGGAGTGAACTCTGGCCCTCCAAAAGA | + |
Preference number: 6 (lower is better) Translates to: QKLEFEAREVAS*NVGSELWPSKR Trigger: TCTTTTGGAGGGCCAGAGTTCACTCCCAACATTCAAGCTAGCCACCTCCCTAGCCTCAAACTCCAGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS CAA 72 bp | AGTCACTGCAGAGCTTTGGTGAGTCACTGCAGAGCTTaGGTGACTGAGATCCCCCTGTCTCTATGGAGGAAG | + |
Preference number: 6 (lower is better) Translates to: SHCRALVSHCRA*VTEIPLSLWRK Trigger: CTTCCTCCATAGAGACAGGGGGATCTCAGTCACCAAAGCTCTGCAGTGACTCACCAAAGCTCTGCAGTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS CAA 90 bp | GCTTTGGTGAGTCACTGCAGAGCTTTGGTGAGTCACTGCAGAGCTTaGGTGACTGAGATCCCCCTGTCTCTATGGAGGAAGGTAAGTGTT | + |
Preference number: 6 (lower is better) Translates to: ALVSHCRALVSHCRA*VTEIPLSLWRKVSV Trigger: AACACTTACCTTCCTCCATAGAGACAGGGGGATCTCAGTCACCAAAGCTCTGCAGTGACTCACCAAAGCTCTGCAGTGACTCACCAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS TCA 72 bp | CAGAGCTTTGGTGAGTCACTGCAGAGCTTTGGTGACTaGGATCCCCCTGTCTCTATGGAGGAAGGTAAGTGT | + |
Preference number: 6 (lower is better) Translates to: QSFGESLQSFGD*DPPVSMEEGKC Trigger: ACACTTACCTTCCTCCATAGAGACAGGGGGATCTCAGTCACCAAAGCTCTGCAGTGACTCACCAAAGCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS GCA 72 bp | TGCTGCTTAGCAATGTCTTCTCAGGTGGAGACTTCCTaGCACTCAGGGTGTCTAGTTCTACAAGACAAGGGG | + |
Preference number: 6 (lower is better) Translates to: CCLAMSSQVETS*HSGCLVLQDKG Trigger: CCCCTTGTCTTGTAGAACTAGACACCCTGAGTGGCAGGAAGTCTCCACCTGAGAAGACATTGCTAAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS CAA 90 bp | CTGGGCTTTGTCTCAGTTCAGGCTGGTCTAGTGGCAGTGCCTTCATaGAAAACAGCTCAGGCTGAAGAGTTAGCTGGTACGGAACTTTGT | + |
Preference number: 6 (lower is better) Translates to: LGFVSVQAGLVAVPS*KTAQAEELAGTELC Trigger: ACAAAGTTCCGTACCAGCTAACTCTTCAGCCTGAGCTGTTTTCAATGAAGGCACTGCCACTAGACCAGCCTGAACTGAGACAAAGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CCA 72 bp | GGGTTGACTGAGATGAATTCTGGGAAGAGATATGGGTaGAGTCTCCATCAGAGTCACTGCAGAGCTTTGGTG | + |
Preference number: 6 (lower is better) Translates to: GLTEMNSGKRYG*SLHQSHCRALV Trigger: CACCAAAGCTCTGCAGTGACTCTGATGGAGACTCCACCCATATCTCTTCCCAGAATTCATCTCAGTCAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS TCA 72 bp | TTTTGGGAAGTTATACCACAGGGTAGTTTATTCCACTaGAAACACTCTTCTGCCTTTGGGTGGCGGCAGGCG | + |
Preference number: 6 (lower is better) Translates to: FWEVIPQGSLFH*KHSSAFGWRQA Trigger: CGCCTGCCGCCACCCAAAGGCAGAAGAGTGTTTTCAGTGGAATAAACTACCCTGTGGTATAACTTCCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS CAA 72 bp | TGGATTGTTCTGGCTCTCTTCAATTTTCCAAGCGGTTaGTACTTTGGCTCAACACTTTGGGGAGACCGGCAC | + |
Preference number: 6 (lower is better) Translates to: WIVLALFNFPSG*YFGSTLWGDRH Trigger: GTGCCGGTCTCCCCAAAGTGTTGAGCCAAAGTACAAACCGCTTGGAAAATTGAAGAGAGCCAGAACAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS CAA 90 bp | GAGTCAAGATGGATTGTTCTGGCTCTCTTCAATTTTCCAAGCGGTTaGTACTTTGGCTCAACACTTTGGGGAGACCGGCACAGAGGCTTT | + |
Preference number: 6 (lower is better) Translates to: ESRWIVLALFNFPSG*YFGSTLWGDRHRGF Trigger: AAAGCCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAAGTACAAACCGCTTGGAAAATTGAAGAGAGCCAGAACAATCCATCTTGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS CAA 90 bp | CACACTGGCTGTCCCAGCCTTGACTTCCTTGATCTGTTATATGGGTaGACTGAGATGAATTCTGGGAAGAGATATGGGTGGAGTCTCCAT | + |
Preference number: 6 (lower is better) Translates to: HTGCPSLDFLDLLYG*TEMNSGKRYGWSLH Trigger: ATGGAGACTCCACCCATATCTCTTCCCAGAATTCATCTCAGTCAACCCATATAACAGATCAAGGAAGTCAAGGCTGGGACAGCCAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS CCA 72 bp | AATTTTCCAAGCGGTTTGTACTTTGGCTCAACACTTTaGGGAGACCGGCACAGAGGCTTTAAAACGTCCATG | + |
Preference number: 6 (lower is better) Translates to: NFPSGLYFGSTL*GDRHRGFKTSM Trigger: CATGGACGTTTTAAAGCCTCTGTGCCGGTCTCCCCAAAGTGTTGAGCCAAAGTACAAACCGCTTGGAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS CAA 72 bp | GGTGGTGGGGTTTCTAGCTCTTCTCCACTGTCGCTGTaGGATTCTTCACAGTCTATGAAGTTAGCCAAAGAA | + |
Preference number: 6 (lower is better) Translates to: GGGVSSSSPLSL*DSSQSMKLAKE Trigger: TTCTTTGGCTAACTTCATAGACTGTGAAGAATCCAACAGCGACAGTGGAGAAGAGCTAGAAACCCCACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CAA 90 bp | GAGGGTCATCAAAGAGATCATCGTCTTCCTCCGAGTCAAGATGGATaGTTCTGGCTCTCTTCAATTTTCCAAGCGGTTTGTACTTTGGCT | + |
Preference number: 6 (lower is better) Translates to: EGHQRDHRLPPSQDG*FWLSSIFQAVCTLA Trigger: AGCCAAAGTACAAACCGCTTGGAAAATTGAAGAGAGCCAGAACAATCCATCTTGACTCGGAGGAAGACGATGATCTCTTTGATGACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CAA 90 bp | CTGGGAGTTCTAATCATGGTGTCCACTGTGATTTCATCTCTTCTTTaGAAGAAGACTTCCCACTGTGGTATGTCCACATCCGGATCAGCA | + |
Preference number: 6 (lower is better) Translates to: LGVLIMVSTVISSLL*KKTSHCGMSTSGSA Trigger: TGCTGATCCGGATGTGGACATACCACAGTGGGAAGTCTTCTTCAAAAGAAGAGATGAAATCACAGTGGACACCATGATTAGAACTCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061852.12 ENSMUST00000115066.8 |
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CDS TCA 72 bp | TCTAGTGGCAGTGCCTTCATTGAAAACAGCTCAGGCTaGAGAGTTAGCTGGTACGGAACTTTGTGCCTTAAA | + |
Preference number: 6 (lower is better) Translates to: SSGSAFIENSSG*RVSWYGTLCLK Trigger: TTTAAGGCACAAAGTTCCGTACCAGCTAACTCTTCAGCCTGAGCTGTTTTCAATGAAGGCACTGCCACTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS GCA 72 bp | TTTTTAAAGGTAAAGATTTGTGTGTGCGCATGTGAATaGAGGTGCCATGGAGGCCAGAAGCTGGAGTTTGAG | + |
Preference number: 6 (lower is better) Translates to: FLKVKICVCACE*RCHGGQKLEFE Trigger: CTCAAACTCCAGCTTCTGGCCTCCATGGCACCTGCATTCACATGCGCACACACAAATCTTTACCTTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000115066.8 |
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CDS CCA 72 bp | GGTTTTTCTGGTCCTCTCTCCAAACCACATGGTAGATaGCTTGATGCTGATTGTGTGGAGTGCAGTTTTGTT | + |
Preference number: 6 (lower is better) Translates to: GFSGPLSKPHGR*LDADCVECSFV Trigger: AACAAAACTGCACTCCACACAATCAGCATCAAGCCATCTACCATGTGGTTTGGAGAGAGGACCAGAAAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS CCA 72 bp | GACCTTATCCACAGTGAGGCCAACTGGGATGACATTTaGATACACATTCACTGGGCAGATGTAGCTCAAAAA | + |
Preference number: 6 (lower is better) Translates to: DLIHSEANWDDI*IHIHWADVAQK Trigger: TTTTTGAGCTACATCTGCCCAGTGAATGTGTATCCAAATGTCATCCCAGTTGGCCTCACTGTGGATAAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000061852.12 ENSMUST00000100463.10 ENSMUST00000102988.10 ENSMUST00000115066.8 ENSMUST00000129657.2 |
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CDS CCA 72 bp | GATCATCGTCTTCCTCCGAGTCAAGATGGATTGTTCTaGCTCTCTTCAATTTTCCAAGCGGTTTGTACTTTG | + |
Preference number: 6 (lower is better) Translates to: DHRLPPSQDGLF*LSSIFQAVCTL Trigger: CAAAGTACAAACCGCTTGGAAAATTGAAGAGAGCCAGAACAATCCATCTTGACTCGGAGGAAGACGATGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CCA 72 bp | GATTTCATCTCTTCTTTTGAAGAAGACTTCCCACTGTaGTATGTCCACATCCGGATCAGCATTTTGCTGGAC | + |
Preference number: 6 (lower is better) Translates to: DFISSFEEDFPL*YVHIRISILLD Trigger: GTCCAGCAAAATGCTGATCCGGATGTGGACATACCACAGTGGGAAGTCTTCTTCAAAAGAAGAGATGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CAA 72 bp | CAAAGAGATCATCGTCTTCCTCCGAGTCAAGATGGATaGTTCTGGCTCTCTTCAATTTTCCAAGCGGTTTGT | + |
Preference number: 6 (lower is better) Translates to: QRDHRLPPSQDG*FWLSSIFQAVC Trigger: ACAAACCGCTTGGAAAATTGAAGAGAGCCAGAACAATCCATCTTGACTCGGAGGAAGACGATGATCTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061852.12 ENSMUST00000102988.10 ENSMUST00000115066.8 |
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CDS CAA 90 bp | GAAGGTAAGTGTTCCAAACATTCACCTGTGATTTCATCTCTTCTTTaGAAGAAGACTTCCCACTGTGGTATGTCCACATCCGGATCAGCA | + |
Preference number: 6 (lower is better) Translates to: EGKCSKHSPVISSLL*KKTSHCGMSTSGSA Trigger: TGCTGATCCGGATGTGGACATACCACAGTGGGAAGTCTTCTTCAAAAGAAGAGATGAAATCACAGGTGAATGTTTGGAACACTTACCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS GCA 72 bp | GCTTTTCAAATCACAGTGAGTATCTTGTGGACACAGTaGATCCTGTTCTATTTGAGAGGCAGAAATACTCTC | + |
Preference number: 6 (lower is better) Translates to: AFQITVSILWTQ*ILFYLRGRNTL Trigger: GAGAGTATTTCTGCCTCTCAAATAGAACAGGATGCACTGTGTCCACAAGATACTCACTGTGATTTGAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS CAA 72 bp | TGTTCCAAACATTCACCTGTGATTTCATCTCTTCTTTaGAAGAAGACTTCCCACTGTGGTATGTCCACATCC | + |
Preference number: 6 (lower is better) Translates to: CSKHSPVISSLL*KKTSHCGMSTS Trigger: GGATGTGGACATACCACAGTGGGAAGTCTTCTTCAAAAGAAGAGATGAAATCACAGGTGAATGTTTGGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS TCA 72 bp | CATCCTGTTCTATTTGAGAGGCAGAAATACTCTCTTTaGGTTTTGGTTTGTAGGCACCCTTGTTTAAAGAGG | + |
Preference number: 6 (lower is better) Translates to: HPVLFERQKYSL*VLVCRHPCLKR Trigger: CCTCTTTAAACAAGGGTGCCTACAAACCAAAACTCAAAGAGAGTATTTCTGCCTCTCAAATAGAACAGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |
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CDS CAA 72 bp | GTGAGTATCTTGTGGACACAGTGCATCCTGTTCTATTaGAGAGGCAGAAATACTCTCTTTGAGTTTTGGTTT | + |
Preference number: 6 (lower is better) Translates to: VSILWTQCILFY*RGRNTLFEFWF Trigger: AAACCAAAACTCAAAGAGAGTATTTCTGCCTCTCAAATAGAACAGGATGCACTGTGTCCACAAGATACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102988.10 |