Pregenerated sensors for DCLRE1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027845Ensembl transcript IDs: ENSMUST00000029435.15, ENSMUST00000063502.13, ENSMUST00000106832.2, ENSMUST00000106834.8, ENSMUST00000128716.2, ENSMUST00000198752.2
Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCCCTCCTCCCCAAGGGTAAGAGATGGCTTTCTTTACTGCTATaGCTCAAGGTTCCAGGCCCAGGCCGTTCCTCGCCTGCACCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SSLLPKGKRWLSLLL*LKVPGPGRSSPAPS Trigger: GGAGGGTGCAGGCGAGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACCCTTGGGGAGGAGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR TCA 90 bp | CCGTATGGTCCACAGCATGGATGCGCCCGGCTTCTTCCTCAACTGTaGACACGTCTGCCAGGCCCAGCAACTGTACCAACTCCAGGCGTT | + |
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Preference number: 1 (lower is better) Translates to: PYGPQHGCARLLPQL*TRLPGPATVPTPGV Trigger: AACGCCTGGAGTTGGTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTTGAGGAAGAAGCCGGGCGCATCCATGCTGTGGACCATACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR TCA 90 bp | GCCAGGCCCCTGGACTCAGGAGTTAGAGGAACAGCTCTGCTAATGTaGGCCGGGGGAGAACCACAGCCTACGCAGTCACTTTGGTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: ARPLDSGVRGTALLM*AGGEPQPTQSLWFP Trigger: AGGGAACCAAAGTGACTGCGTAGGCTGTGGTTCTCCCCCGGCTCACATTAGCAGAGCTGTTCCTCTAACTCCTGAGTCCAGGGGCCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR GCA 90 bp | TCACGTTCTTTCCTGCAGAAGTCTGGGAACAACTGCTTCCTGGCCTaGAGAGGATGGGGGCAAAGCCTCTCAAGGTGCCCAGCCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: SRSFLQKSGNNCFLA*RGWGQSLSRCPAQG Trigger: TCCCTGGGCTGGGCACCTTGAGAGGCTTTGCCCCCATCCTCTGCAGGCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGGAAAGAACGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR CCA 90 bp | TTCCTGCAGAAGTCTGGGAACAACTGCTTCCTGGCCTGCAGAGGATaGGGGCAAAGCCTCTCAAGGTGCCCAGCCCAGGGAGAGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: FLQKSGNNCFLACRG*GQSLSRCPAQGERF Trigger: AAACCTCTCTCCCTGGGCTGGGCACCTTGAGAGGCTTTGCCCCCATCCTCTGCAGGCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR CCA 90 bp | GCTCATCACGTTCTTTCCTGCAGAAGTCTGGGAACAACTGCTTCCTaGCCTGCAGAGGATGGGGGCAAAGCCTCTCAAGGTGCCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: AHHVLSCRSLGTTAS*PAEDGGKASQGAQP Trigger: GGGCTGGGCACCTTGAGAGGCTTTGCCCCCATCCTCTGCAGGCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGGAAAGAACGTGATGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR TCA 90 bp | ACAAGGCCTCAGCGCTGCCACAAAAGCACGGAGCTCGGAGTAAGATaGATGGTCAGAGTACGGGACGGTGTAGATGCTGGGGTGAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: TRPQRCHKSTELGVR*MVRVRDGVDAGVRA Trigger: AGCCCTCACCCCAGCATCTACACCGTCCCGTACTCTGACCATTCATCTTACTCCGAGCTCCGTGCTTTTGTGGCAGCGCTGAGGCCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR GCA 90 bp | AAAGCTCCTCCCTCCTCCCCAAGGGTAAGAGATGGCTTTCTTTACTaGTATGGCTCAAGGTTCCAGGCCCAGGCCGTTCCTCGCCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: KAPPSSPRVRDGFLY*YGSRFQAQAVPRLH Trigger: GTGCAGGCGAGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACCCTTGGGGAGGAGGGAGGAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR TCA 90 bp | GTGAACACGTCTGCCAGGCCCAGCAACTGTACCAACTCCAGGCGTTaGGGACTTAATACCACCCAGGTCCGAAACTCAAGGGCTAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: VNTSARPSNCTNSRR*GLNTTQVRNSRASC Trigger: GCAACTAGCCCTTGAGTTTCGGACCTGGGTGGTATTAAGTCCTCAACGCCTGGAGTTGGTACAGTTGCTGGGCCTGGCAGACGTGTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR CCA 90 bp | CCCAGGCCGTTCCTCGCCTGCACCCTCCCAGACCGCATTTCCTCATaGCTGTGCTATCAGCTGTCTTGCTTATTGGTTTGGCATTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: PRPFLACTLPDRISS*LCYQLSCLLVWHFV Trigger: GACAAAATGCCAAACCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTGCAGGCGAGGAACGGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR TCA 90 bp | GCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTaGACCACATGCCTCACCTGCTGCAGTTCCTATGAAGCCCTTAGA | + |
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Preference number: 1 (lower is better) Translates to: AMCPGFQPANVQVSC*TTCLTCCSSYEALR Trigger: TCTAAGGGCTTCATAGGAACTGCAGCAGGTGAGGCATGTGGTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR GCA 90 bp | TCCCCTGGAACTGGAGTTACAGATGGTTGTGAGCCACCATGTGGGTaGTGGGAATTGAACCCGGGTCCTATTGAAGAGAAGCCTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SPGTGVTDGCEPPCG*WELNPGPIEEKPVL Trigger: GAGCACAGGCTTCTCTTCAATAGGACCCGGGTTCAATTCCCAGCACCCACATGGTGGCTCACAACCATCTGTAACTCCAGTTCCAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
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| 3UTR CCA 90 bp | TCAAGCTGTCCTGAAAGAACTCTCCACAAGGCTTTTGATGGACGATaGGCACCACCTGACAAGGCCTCAGCGCTGCCACAAAAGCACGGA | + |
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Preference number: 1 (lower is better) Translates to: SSCPERTLHKAFDGR*APPDKASALPQKHG Trigger: TCCGTGCTTTTGTGGCAGCGCTGAGGCCTTGTCAGGTGGTGCCCATCGTCCATCAAAAGCCTTGTGGAGAGTTCTTTCAGGACAGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR CCA 90 bp | CACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTaGATACTAAAACAAACAAGCTCTGTGCTCTGGCTCCCTAATTCA | + |
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Preference number: 1 (lower is better) Translates to: HTLTRSSQLAPWSLP*ILKQTSSVLWLPNS Trigger: TGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR GCA 90 bp | CCGTTCCTCGCCTGCACCCTCCCAGACCGCATTTCCTCATGGCTGTaGTATCAGCTGTCTTGCTTATTGGTTTGGCATTTTGTCAGGTTA | + |
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Preference number: 1 (lower is better) Translates to: PFLACTLPDRISSWL*YQLSCLLVWHFVRL Trigger: TAACCTGACAAAATGCCAAACCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTGCAGGCGAGGAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR GCA 90 bp | TCTTGTTGGAGTCACAAAAGAGGACTGGCTCATCACGTTCTTTCCTaGAGAAGTCTGGGAACAACTGCTTCCTGGCCTGCAGAGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: SCWSHKRGLAHHVLS*RSLGTTASWPAEDG Trigger: CCCATCCTCTGCAGGCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGGAAAGAACGTGATGAGCCAGTCCTCTTTTGTGACTCCAACAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR CCA 90 bp | CCTGGAACTGGAGTTACAGATGGTTGTGAGCCACCATGTGGGTGCTaGGAATTGAACCCGGGTCCTATTGAAGAGAAGCCTGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: PGTGVTDGCEPPCGC*ELNPGPIEEKPVLL Trigger: TAAGAGCACAGGCTTCTCTTCAATAGGACCCGGGTTCAATTCCCAGCACCCACATGGTGGCTCACAACCATCTGTAACTCCAGTTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
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| 3UTR CCA 90 bp | ACATCCACCGGGCTCAGAACTGCAGGACTGCTACGCTGTACTCTCTaGTGTTTTTCCACTTGCTTGTCGAAGTTCCTGGAAGAGAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: TSTGLRTAGLLRCTL*CFSTCLSKFLEEKP Trigger: AGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAGCAGTCCTGCAGTTCTGAGCCCGGTGGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGGTCACAACCACCTGGAATAGGATCTaGTGCCCTCTTCTGGTGTCTCAGAAGACAGTGACAGTGTATATG | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWVTTTWNRI*CPLLVSQKTVTVYM Trigger: CATATACACTGTCACTGTCTTCTGAGACACCAGAAGAGGGCATCAGATCCTATTCCAGGTGGTTGTGACCCACCATGTGGTTGCTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 |
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| 3UTR CCA 90 bp | TCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAAGTTCCTTaGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: SWFPVRSERQRQEVP*LGSCHSKSVTVRVR Trigger: TCTAACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR CCA 90 bp | GGCAGTCAACACAGTCGCCATCTTGTTGGAGTCACAAAAGAGGACTaGCTCATCACGTTCTTTCCTGCAGAAGTCTGGGAACAACTGCTT | + |
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Preference number: 1 (lower is better) Translates to: GSQHSRHLVGVTKED*LITFFPAEVWEQLL Trigger: AAGCAGTTGTTCCCAGACTTCTGCAGGAAAGAACGTGATGAGCCAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGTGTTGACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR CCA 90 bp | TGTTTTTCCACTTGCTTGTCGAAGTTCCTGGAAGAGAAGCCTGCTTaGAGGAAATGCACTGGAGTGAGAAGGTATTTTAGCGCCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: CFSTCLSKFLEEKPA*RKCTGVRRYFSARP Trigger: GGGCCTGGCGCTAAAATACCTTCTCACTCCAGTGCATTTCCTCCAAGCAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR TCA 90 bp | TGCTATCAGCTGTCTTGCTTATTGGTTTGGCATTTTGTCAGGTTATaGGCAGGACAGGGTAGAACTGCACACTCTGACCCGTTCCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: CYQLSCLLVWHFVRL*AGQGRTAHSDPFQP Trigger: TGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCTGTCCTGCTCATAACCTGACAAAATGCCAAACCAATAAGCAAGACAGCTGATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR TCA 90 bp | TTTATGTTGTGTTGTGGGAACTGTCGGATTAGCTGGACAATCTGCTaGGTAGCCTCTTGTCGGGAAGGAAGAACCAGGGCTGGATTGCAA | + |
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Preference number: 1 (lower is better) Translates to: FMLCCGNCRISWTIC*VASCREGRTRAGLQ Trigger: TTGCAATCCAGCCCTGGTTCTTCCTTCCCGACAAGAGGCTACTCAGCAGATTGTCCAGCTAATCCGACAGTTCCCACAACACAACATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128716.2 |
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| 3UTR GCA 90 bp | TGCCAAAGCACATTTGTTTTCCTAGAGGAGGAACTCATGTACTGCTaGACAGAGTGTGGAATCAGAGGCATAGCGAGCCTAGGACTCAAG | + |
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Preference number: 1 (lower is better) Translates to: CQSTFVFLEEELMYC*TECGIRGIASLGLK Trigger: CTTGAGTCCTAGGCTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAGTACATGAGTTCCTCCTCTAGGAAAACAAATGTGCTTTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR CCA 90 bp | CCCACTAAGCCATCTCACTGGCCCTTTAAAACATTATTTAAGGGCTaGAGTGCTCAGTGGTTAAGAGCACTGACTGCTCATCCAGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: PTKPSHWPFKTLFKG*SAQWLRALTAHPEV Trigger: GACCTCTGGATGAGCAGTCAGTGCTCTTAACCACTGAGCACTCCAGCCCTTAAATAATGTTTTAAAGGGCCAGTGAGATGGCTTAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 |
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| 3UTR CCA 90 bp | TTCCCCTTTGGAGATAAGAGTCTTTCTACAGAGCTGTGGCTGCTTTaGAACTCACTATGTAGACCAGGCTACTTCTGCCTCCTGAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: FPFGDKSLSTELWLL*NSLCRPGYFCLLSA Trigger: AGCACTCAGGAGGCAGAAGTAGCCTGGTCTACATAGTGAGTTCCAAAGCAGCCACAGCTCTGTAGAAAGACTCTTATCTCCAAAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
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| 3UTR GCA 90 bp | CTGCCTTTTCAGCCTCCCTGCATTCTGTGTATCTGTCGCACTGGCTaGTACTTCTCTGACAAAGCGTCCTCCTACTTCTTCTTAAAAATG | + |
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Preference number: 1 (lower is better) Translates to: LPFQPPCILCICRTG*YFSDKASSYFFLKM Trigger: CATTTTTAAGAAGAAGTAGGAGGACGCTTTGTCAGAGAAGTAGCAGCCAGTGCGACAGATACACAGAATGCAGGGAGGCTGAAAAGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
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| 3UTR CCA 90 bp | ATTTGTTTTCCTAGAGGAGGAACTCATGTACTGCTGCACAGAGTGTaGAATCAGAGGCATAGCGAGCCTAGGACTCAAGCTGTCCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: ICFPRGGTHVLLHRV*NQRHSEPRTQAVLK Trigger: TTTCAGGACAGCTTGAGTCCTAGGCTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAGTACATGAGTTCCTCCTCTAGGAAAACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR GCA 90 bp | CCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACACTGTTTCAGTaGCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: PFMKKEGVIFLTLFQ*LFMVSCSLREAKTG Trigger: TCCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGTGTTAGGAAAATAACACCTTCCTTCTTCATGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR GCA 90 bp | TTCTCCCTGGTTTCTGGAAAGAGAAACTCATCTATAGGTTGTAATTaGACTGAGAATTCCAGTGGGGCAGTCAACACAGTCGCCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: FSLVSGKRNSSIGCN*TENSSGAVNTVAIL Trigger: CAAGATGGCGACTGTGTTGACTGCCCCACTGGAATTCTCAGTGCAATTACAACCTATAGATGAGTTTCTCTTTCCAGAAACCAGGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR CCA 90 bp | TCTCACTGGCCCTTTAAAACATTATTTAAGGGCTGGAGTGCTCAGTaGTTAAGAGCACTGACTGCTCATCCAGAGGTCCTGAGTTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: SHWPFKTLFKGWSAQ*LRALTAHPEVLSSN Trigger: ATTTGAACTCAGGACCTCTGGATGAGCAGTCAGTGCTCTTAACCACTGAGCACTCCAGCCCTTAAATAATGTTTTAAAGGGCCAGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 |
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| 3UTR GCA 90 bp | TTAGTACTGTTTATAGGCAAGCATGGCAGCCAAAGGACAACCTTATaGACTCAGATCTCCTTTTCCATTTTTATGTGGGCTCTAGGGATT | + |
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Preference number: 1 (lower is better) Translates to: LVLFIGKHGSQRTTL*TQISFSIFMWALGI Trigger: AATCCCTAGAGCCCACATAAAAATGGAAAAGGAGATCTGAGTGCATAAGGTTGTCCTTTGGCTGCCATGCTTGCCTATAAACAGTACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 |
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| 3UTR-3UTR GCA 90 bp | CCACCTGACAAGGCCTCAGCGCTGCCACAAAAGCACGGAGCTCGGAGTAAGATGTGCTGGGGTGAGGGCTaGGCACTTTCCGGCTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PPDKASALPQKHGARSKMCWGEG*ALSGLW Trigger: CCACAAGCCGGAAAGTGCGCAGCCCTCACCCCAGCA...CATCTTACTCCGAGCTCCGTGCTTTTGTGGCAGCGCTGAGGCCTTGTCAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR-3UTR TCA 90 bp | GGACGATGGGCACCACCTGACAAGGCCTCAGCGCTGCCACAAAAGCACGGAGCTCTTCTTCCTCAACTGTaGACACGTCTGCCAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GRWAPPDKASALPQKHGALLPQL*TRLPGP Trigger: TGGGCCTGGCAGACGTGTTCACAGTTGAGGAAGAAG...AGCTCCGTGCTTTTGTGGCAGCGCTGAGGCCTTGTCAGGTGGTGCCCATCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCTGACAAGGCCTCAGCGCTGCCACAAAAGCACGGAGCTCGGAGTAAGATGGGACGGTGTAGATGCTaGGGTGAGGGCTGCGCACTT | + |
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Preference number: 2 (lower is better) Translates to: PPDKASALPQKHGARSKMGRCRC*GEGCAL Trigger: AAGTGCGCAGCCCTCACCCCAGCATCTACACCGTCC...CATCTTACTCCGAGCTCCGTGCTTTTGTGGCAGCGCTGAGGCCTTGTCAGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR-3UTR TCA 90 bp | AACTGCTTCCTGGCCTGCAGAGGATGGGGGCAAAGCCTCTCAAGGTGCCCAGCCGAGTTCTTGGCCTCTTaGGCCTCCTTTCTAACTGCC | + |
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Preference number: 2 (lower is better) Translates to: NCFLACRGWGQSLSRCPAEFLAS*ASFLTA Trigger: GGCAGTTAGAAAGGAGGCTCAAGAGGCCAAGAACTC...GGCTGGGCACCTTGAGAGGCTTTGCCCCCATCCTCTGCAGGCCAGGAAGCAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATGGCAGAGTGGCAGATCTCCGTATGGTCCACAGCATGGATGCGCCCGGCTAACTGTGAACACGTCTaGCAGGCCCAGCAACTGTAC | + |
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Preference number: 2 (lower is better) Translates to: SMAEWQISVWSTAWMRPANCEHV*QAQQLY Trigger: GTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTT...AGCCGGGCGCATCCATGCTGTGGACCATACGGAGATCTGCCACTCTGCCATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR CAA 90 bp | GAGCCTAGGACTCAAGCTGTCCTGAAAGAACTCTCCACAAGGCTTTaGATGGACGATGGGCACCACCTGACAAGGCCTCAGCGCTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: EPRTQAVLKELSTRL*MDDGHHLTRPQRCH Trigger: GTGGCAGCGCTGAGGCCTTGTCAGGTGGTGCCCATCGTCCATCAAAAGCCTTGTGGAGAGTTCTTTCAGGACAGCTTGAGTCCTAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCGTCACAGCAAGTCAGTaGCAGTCAGGGTTAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: RVELHTLTRSSQLAPWSLVTASQ*QSGLEQ Trigger: CTGTTCTAACCCTGACTGTCACTGACTTGCTGTGAC...GAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGTTCCCTCTCGCTGGTGAGCCACTGTCTCCCCTTGACAGCAATGGGGACTCAAACACAACACCCTaGGTTCTTGGCCTCTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LWFPLAGEPLSPLDSNGDSNTTP*VLGLLS Trigger: GCTCAAGAGGCCAAGAACTCAGGGTGTTGTGTTTGA...GTCCCCATTGCTGTCAAGGGGAGACAGTGGCTCACCAGCGAGAGGGAACCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGCCAATGTCCAGGTTTCCTGTTGAACCACATGCCTCACCTGCTGCAGTTAAGCTTCAGAAGAGCTaGTGGGGTGAGCCCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SQPMSRFPVEPHASPAAVKLQKS*WGEPQG Trigger: ACCCTGGGGCTCACCCCAGCAGCTCTTCTGAAGCTT...AACTGCAGCAGGTGAGGCATGTGGTTCAACAGGAAACCTGGACATTGGCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR-3UTR GCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTAAGCTTCAGAAGAGCTaGTGGGGTGAGCCCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRKLQKS*WGEPQG Trigger: ACCCTGGGGCTCACCCCAGCAGCTCTTCTGAAGCTT...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCCAATGTCCAGGTTTCCTGTTGAACCACATGCCTCACCTGCTGCAGTTCTTCAGAAGAGCTGCTaGGGTGAGCCCCAGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SQPMSRFPVEPHASPAAVLQKSC*GEPQGS Trigger: AGAACCCTGGGGCTCACCCCAGCAGCTCTTCTGAAG...AACTGCAGCAGGTGAGGCATGTGGTTCAACAGGAAACCTGGACATTGGCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| 3UTR CAA 90 bp | CAGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTaGGTCTCTCCCCTGGATACTAAAACAAACAAGCTCTGTGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QGRTAHSDPFQPAGS*VSPLDTKTNKLCAL Trigger: CAGAGCACAGAGCTTGTTTGTTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTCTTCAGAAGAGCTGCTaGGGTGAGCCCCAGGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HPPRPHFLMAVLSAVLLILQKSC*GEPQGS Trigger: AGAACCCTGGGGCTCACCCCAGCAGCTCTTCTGAAG...AATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGCCCGTTCCAGCCAGCTaGCTCCTTGGTCTCTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: WAICSAPFVCTHTCNTHMPVPAS*LLGLSP Trigger: AGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGG...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAAGTCACAGCAAGTCAGTaGCAGTCAGGGTTAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: TLTRSSQLAPWSLPWILKVTASQ*QSGLEQ Trigger: CTGTTCTAACCCTGACTGTCACTGACTTGCTGTGAC...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGACAGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGAACAAACAAGCTCTGTaGTCTGGCTCCCTAATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: AGQGRTAHSDPFQPAGSLNKQAL*SGSLIQ Trigger: TTGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTT...CAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCTGTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAACTTCAGAAGAGCTGCTaGGGTGAGCCCCAGGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKLQKSC*GEPQGS Trigger: AGAACCCTGGGGCTCACCCCAGCAGCTCTTCTGAAG...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCTGCCTAACCTCCAAATaGCTATGTTCCAGATGGATG | + |
|
Preference number: 2 (lower is better) Translates to: RVELHTLTRSSQLAPWSLCLTSK*LCSRWM Trigger: CATCCATCTGGAACATAGCCATTTGGAGGTTAGGCA...GAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTGAACAGCCAGCTGGCTCCTTaGTCTCTCCCCTGGATACTA | + |
|
Preference number: 2 (lower is better) Translates to: ICHVPWIPASQCPGFLLNSQLAP*SLPWIL Trigger: TAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCT...GTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGGTCACAGCAAGTCAGTaGCAGTCAGGGTTAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: PSQTAFPHGCAISCLAYWVTASQ*QSGLEQ Trigger: CTGTTCTAACCCTGACTGTCACTGACTTGCTGTGAC...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGAACTCATGTACTGCTGCACAGAGTGTGGAATCAGAGGCATAGCGAGCCTAGAGCTCGGAGTAAGATaGATGGTCAGAGTACGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: EELMYCCTECGIRGIASLELGVR*MVRVRD Trigger: GTCCCGTACTCTGACCATTCATCTTACTCCGAGCTC...TAGGCTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAGTACATGAGTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CAA 90 bp | TGCACTGAGAATTCCAGTGGGGCAGTCAACACAGTCGCCATCTTGTaGGAGTCACAAAAGAGGACTGGCTCATCACGTTCTTTCCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CTENSSGAVNTVAIL*ESQKRTGSSRSFLQ Trigger: CTGCAGGAAAGAACGTGATGAGCCAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGTGTTGACTGCCCCACTGGAATTCTCAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCAACTGTGAACACGTCTGCCAGGCCCAGCAACTGTACCAACTCCAGGCGTAACTCAAGGGCTAGTTaGTCCAGCAGTGATTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSTVNTSARPSNCTNSRRNSRAS*SSSDSF Trigger: AAAAGAATCACTGCTGGAGCAACTAGCCCTTGAGTT...ACGCCTGGAGTTGGTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTAGACAGGAAGTTCCTTaGTTAGGGTCATGTCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRRQEVP*LGSCHS Trigger: GCTGTGACATGACCCTAACCAAGGAACTTCCTGTCT...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAAACAAGCTCTGTGCTCTaGCTCCCTAATTCAAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: TLTRSSQLAPWSLPWILKTSSVL*LPNSNL Trigger: CAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGT...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 90 bp | CAGAACTGCAGGACTGCTACGCTGTACTCTCTGGTGTTTTTCCACTaGCTTGTCGAAGTTCCTGGAAGAGAAGCCTGCTTGGAGGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: QNCRTATLYSLVFFH*LVEVPGREACLEEM Trigger: CATTTCCTCCAAGCAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAGCAGTCCTGCAGTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACAAACAAGCTCTGTGCTCTGGCTCCCTAATTCAAACTTGTGGGGGTGGGGGCTTTTATCTGGGACTTaGGGATGGGGACAGGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: KQTSSVLWLPNSNLWGWGLLSGT*GWGQDK Trigger: TTTGTCCTGTCCCCATCCTCAAGTCCCAGATAAAAG...CCCCCACCCCCACAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTCTTTTATCTGGGACTTaGGGATGGGGACAGGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: HPPRPHFLMAVLSAVLLILLSGT*GWGQDK Trigger: TTTGTCCTGTCCCCATCCTCAAGTCCCAGATAAAAG...AATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR TCA 90 bp | GTACTCTCTGGTGTTTTTCCACTTGCTTGTCGAAGTTCCTGGAAGAGAAGCCTGACCAACTCCAGGCGTTaGGGACTTAATACCACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLSGVFPLACRSSWKRSLTNSRR*GLNTTQ Trigger: CTGGGTGGTATTAAGTCCTCAACGCCTGGAGTTGGT...CAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCAGAGAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGCCGACATCTTTTATCTaGGACTTGAGGATGGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRPTSFI*DLRMGT Trigger: TGTCCCCATCCTCAAGTCCCAGATAAAAGATGTCGG...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACAAACAAGCTCTGTGCTCTGGCTCCCTAATTCAAACTTGTGGGGGTGGGGGCCGACATCTTTTATCTaGGACTTGAGGATGGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: KQTSSVLWLPNSNLWGWGPTSFI*DLRMGT Trigger: TGTCCCCATCCTCAAGTCCCAGATAAAAGATGTCGG...CCCCCACCCCCACAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTTCCTCTGGCTATGTTCCAGATaGATGTCTCATGACAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: EMAFFTAMAQGSRPRPFLWLCSR*MSHDSY Trigger: GTAACTGTCATGAGACATCCATCTGGAACATAGCCA...GAGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGACAAGCTCTGTGCTCTaGCTCCCTAATTCAAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: PSQTAFPHGCAISCLAYWTSSVL*LPNSNL Trigger: CAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGT...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTACAAGCTCTGTGCTCTaGCTCCCTAATTCAAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRTSSVL*LPNSNL Trigger: CAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGT...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 90 bp | CCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGTTTGGCATTTaGTCAGGTTATGAGCAGGACAGGGTAGAACTGCACACTCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: PHGCAISCLAYWFGI*SGYEQDRVELHTLT Trigger: GGTCAGAGTGTGCAGTTCTACCCTGTCCTGCTCATAACCTGACAAAATGCCAAACCAATAAGCAAGACAGCTGATAGCACAGCCATGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 90 bp | AATTGCACTGAGAATTCCAGTGGGGCAGTCAACACAGTCGCCATCTaGTTGGAGTCACAAAAGAGGACTGGCTCATCACGTTCTTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: NCTENSSGAVNTVAI*LESQKRTGSSRSFL Trigger: CAGGAAAGAACGTGATGAGCCAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGTGTTGACTGCCCCACTGGAATTCTCAGTGCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTCATTTTGTCAGGTTATaGGCAGGACAGGGTAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: HPPRPHFLMAVLSAVLLIHFVRL*AGQGRT Trigger: AGTTCTACCCTGTCCTGCTCATAACCTGACAAAATG...AATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACTCTATAGAACAGGCTGGCCTCAAACTCAGAAATCCGCCTTCCTCTGCCTCGCTGGGGAGAAGAGATaGGAATTTAAGAGTGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SLYRTGWPQTQKSAFLCLAGEKR*EFKSED Trigger: ATCCTCACTCTTAAATTCTCATCTCTTCTCCCCAGC...GAGGCAGAGGAAGGCGGATTTCTGAGTTTGAGGCCAGCCTGTTCTATAGAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTGAACGATGGCTTTCTTTACTaGTATGGCTCAAGGTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ICHVPWIPASQCPGFLLNDGFLY*YGSRFQ Trigger: CTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATC...GTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTTCCTCAGCTATGTGAACAATTaGAGAATATCTGGCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: EMAFFTAMAQGSRPRPFLSYVNN*RISGST Trigger: TGTGCTGCCAGATATTCTCCAATTGTTCACATAGCT...GAGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTATTTGCCATGTGCCCTaGATTCCAGCCAGCCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPICHVP*IPASQC Trigger: ACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGTACGAAACCCCTTCATaGAGAAGGAAGGTGTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: PSQTAFPHGCAISCLAYWYETPS*RRKVLF Trigger: AAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTA...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGCCGACATCTTTTATCTaGGACTTGAGGATGGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: WAICSAPFVCTHTCNTHMPTSFI*DLRMGT Trigger: TGTCCCCATCCTCAAGTCCCAGATAAAAGATGTCGG...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGAGACAGGAAGTTCCTTaGTTAGGGTCATGTCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: WAICSAPFVCTHTCNTHMRQEVP*LGSCHS Trigger: GCTGTGACATGACCCTAACCAAGGAACTTCCTGTCT...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGCATTTTGTCAGGTTATaGGCAGGACAGGGTAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: WAICSAPFVCTHTCNTHMHFVRL*AGQGRT Trigger: AGTTCTACCCTGTCCTGCTCATAACCTGACAAAATG...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAAATTTCCTCATGGCTGTaGTATCAGCTGTCTTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKISSWL*YQLSCL Trigger: TAAGCAAGACAGCTGATAGCACAGCCATGAGGAAAT...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTGAACAGCTATGTGAACAATTaGAGAATATCTGGCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: ICHVPWIPASQCPGFLLNSYVNN*RISGST Trigger: TGTGCTGCCAGATATTCTCCAATTGTTCACATAGCT...GTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGCCTTGGTCTCTCCCCTaGATACTAAAACAAACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: WAICSAPFVCTHTCNTHMPWSLP*ILKQTS Trigger: GCTTGTTTGTTTTAGTATCCAGGGGAGAGACCAAGG...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTCCTTGGTCTCTCCCCTaGATACTAAAACAAACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPPWSLP*ILKQTS Trigger: GCTTGTTTGTTTTAGTATCCAGGGGAGAGACCAAGG...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGCCCAAGGGTAAGAGATaGCTTTCTTTACTGCTATGG | + |
|
Preference number: 2 (lower is better) Translates to: WAICSAPFVCTHTCNTHMPKGKR*LSLLLW Trigger: CCATAGCAGTAAAGAAAGCCATCTCTTACCCTTGGG...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGAACAAGCAAACAGCTGGTCTTCTAATGCACCTATTTAAAGCACAGCAACTTCTGCCTCCTGAGTaGTGGGATAGAAGGTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: HLNKQTAGLLMHLFKAQQLLPPE*WDRRCE Trigger: CTCACACCTTCTATCCCAGCACTCAGGAGGCAGAAG...TTGCTGTGCTTTAAATAGGTGCATTAGAAGACCAGCTGTTTGCTTGTTCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTGCCCAATCCTTGAGGGTTTCTTTTGGAGTTTGTTTAGGAGTTTACATTTGAGACCAGGCTACTTCTaGCTCCTGAGTGCTGGGATA | + |
|
Preference number: 2 (lower is better) Translates to: HCPILEGFFWSLFRSLHLRPGYF*LLSAGI Trigger: TATCCCAGCACTCAGGAGGCAGAAGTAGCCTGGTCT...CAAATGTAAACTCCTAAACAAACTCCAAAAGAAACCCTCAAGGATTGGGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAGGTTTGAGAAAAACTaGGTTAAACCAAGTGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRRFEKN*VKPSGT Trigger: TGTTCCACTTGGTTTAACCCAGTTTTTCTCAAACCT...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTCACAAAAGAGGACTGGCTCATCACGTTCTTTCCTGCAGAAGTCTGGGAACTTTTTGTGCTTCTTTaGGTCTCTGTCAACTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GVTKEDWLITFFPAEVWELFVLL*VSVNFN Trigger: GTTAAAGTTGACAGAGACTCAAAGAAGCACAAAAAG...TTCCCAGACTTCTGCAGGAAAGAACGTGATGAGCCAGTCCTCTTTTGTGACTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAATGCTATCAGCTGTCTTaGTTATTGGTTTGGCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKCYQLS*LLVWHF Trigger: AAAATGCCAAACCAATAAGCAAGACAGCTGATAGCA...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGAACAAGCAAACAGCTGGTCTTCTAATGCACCTATTTAAAGCACAGCAACCTTTTCAGCCTCCCTaGATTCTGTGTATCTGTCGC | + |
|
Preference number: 2 (lower is better) Translates to: HLNKQTAGLLMHLFKAQQPFQPP*ILCICR Trigger: GCGACAGATACACAGAATGCAGGGAGGCTGAAAAGG...TTGCTGTGCTTTAAATAGGTGCATTAGAAGACCAGCTGTTTGCTTGTTCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR-3UTR CCA 90 bp | GTACTCTCTGGTGTTTTTCCACTTGCTTGTCGAAGTTCCTGGAAGAGAAGCCTGAGCCAATTTTCTCCCTaGTTTCTGGAAAGAGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: VLSGVFPLACRSSWKRSLSQFSP*FLERET Trigger: AGTTTCTCTTTCCAGAAACCAGGGAGAAAATTGGCT...CAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCAGAGAGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTAGGTTTGAGAAAAACTaGGTTAAACCAAGTGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPRFEKN*VKPSGT Trigger: TGTTCCACTTGGTTTAACCCAGTTTTTCTCAAACCT...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGAACAAGCAAACAGCTGGTCTTCTAATGCACCTATTTAAAGCACAGCAACTACAGAGCTGTGGCTaGTTTGGAACTCACTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: HLNKQTAGLLMHLFKAQQLQSCG*FGTHYV Trigger: TACATAGTGAGTTCCAAAGCAGCCACAGCTCTGTAG...TTGCTGTGCTTTAAATAGGTGCATTAGAAGACCAGCTGTTTGCTTGTTCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTCCAATTTTTATGTTGTGTTGTGGGAACTGTCGGATTAGCTGGACAATCTAGGAAGAACCAGGGCTaGATTGCAATTAGTGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RVQFLCCVVGTVGLAGQSRKNQG*IAISVV Trigger: GACAACACTAATTGCAATCCAGCCCTGGTTCTTCCT...AGATTGTCCAGCTAATCCGACAGTTCCCACAACACAACATAAAAATTGGACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128716.2 |
||
| 3UTR CAA 90 bp | GGAATACTGTTCCTCTTCCAGTTAAAACCACTCAGCAGCTCTTTATaGAGATTGCAGTCAAGTTTAAGATTGCTCAGTTCCACTCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: GILFLFQLKPLSSSL*RLQSSLRLLSSTPT Trigger: AGTTGGAGTGGAACTGAGCAATCTTAAACTTGACTGCAATCTCAATAAAGAGCTGCTGAGTGGTTTTAACTGGAAGAGGAACAGTATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCCAATTTTTATGTTGTGTTGTGGGAACTGTCGGATTAGCTGGACAATCTGCTTCTAGATACAAAGTATaGATCTGTTTCCCCAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: VQFLCCVVGTVGLAGQSASRYKV*ICFPSI Trigger: GATACTGGGGAAACAGATTCATACTTTGTATCTAGA...AGCAGATTGTCCAGCTAATCCGACAGTTCCCACAACACAACATAAAAATTGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128716.2 |
||
| 3UTR CAA 90 bp | CCAATCCTTGAGGGTTTCTTTTGGAGTTTGTTTAGGAGTTTACATTaGTGTGTTGCGGGATATAGCAGCAGAGGCATATTTAAAATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: PILEGFFWSLFRSLH*CVAGYSSRGIFKMY Trigger: GTACATTTTAAATATGCCTCTGCTGCTATATCCCGCAACACACAAATGTAAACTCCTAAACAAACTCCAAAAGAAACCCTCAAGGATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGTCACTTGAACAAGCAAACAGCTGGTCTTCTAATGCACCTATTTAAAGCAATGTACAGAATACACTaGGAGGTGATGGATTTAATT | + |
|
Preference number: 2 (lower is better) Translates to: WSHLNKQTAGLLMHLFKAMYRIH*EVMDLI Trigger: AATTAAATCCATCACCTCCCAGTGTATTCTGTACAT...TGCTTTAAATAGGTGCATTAGAAGACCAGCTGTTTGCTTGTTCAAGTGACTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR CAA 90 bp | TTGAGGGTTTCTTTTGGAGTTTGTTTAGGAGTTTACATTTGTGTGTaGCGGGATATAGCAGCAGAGGCATATTTAAAATGTACAGAATAC | + |
|
Preference number: 2 (lower is better) Translates to: LRVSFGVCLGVYICV*RDIAAEAYLKCTEY Trigger: GTATTCTGTACATTTTAAATATGCCTCTGCTGCTATATCCCGCAACACACAAATGTAAACTCCTAAACAAACTCCAAAAGAAACCCTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR GCA 72 bp | GATGCGCCCGGCTTCTTCCTCAACTGTGAACACGTCTaGCAGGCCCAGCAACTGTACCAACTCCAGGCGTTG | + |
|
Preference number: 3 (lower is better) Translates to: DAPGFFLNCEHV*QAQQLYQLQAL Trigger: CAACGCCTGGAGTTGGTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTTGAGGAAGAAGCCGGGCGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR TCA 72 bp | CCACAGCATGGATGCGCCCGGCTTCTTCCTCAACTGTaGACACGTCTGCCAGGCCCAGCAACTGTACCAACT | + |
|
Preference number: 3 (lower is better) Translates to: PQHGCARLLPQL*TRLPGPATVPT Trigger: AGTTGGTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTTGAGGAAGAAGCCGGGCGCATCCATGCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR TCA 72 bp | CCTCAGATCCCCTGGAACTGGAGTTACAGATGGTTGTaGGCCACCATGTGGGTGCTGGGAATTGAACCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQIPWNWSYRWL*ATMWVLGIEPG Trigger: CCCGGGTTCAATTCCCAGCACCCACATGGTGGCTCACAACCATCTGTAACTCCAGTTCCAGGGGATCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR GCA 72 bp | CCCTCCTCCCCAAGGGTAAGAGATGGCTTTCTTTACTaGTATGGCTCAAGGTTCCAGGCCCAGGCCGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSSPRVRDGFLY*YGSRFQAQAVP Trigger: AGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACCCTTGGGGAGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR GCA 72 bp | AGTAAGATGAATGGTCAGAGTACGGGACGGTGTAGATaGTGGGGTGAGGGCTGCGCACTTTCCGGCTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SKMNGQSTGRCR*WGEGCALSGLW Trigger: CCACAAGCCGGAAAGTGCGCAGCCCTCACCCCAGCATCTACACCGTCCCGTACTCTGACCATTCATCTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CCA 72 bp | ATGGCAGAGTGGCAGATCTCCGTATGGTCCACAGCATaGATGCGCCCGGCTTCTTCCTCAACTGTGAACACG | + |
|
Preference number: 3 (lower is better) Translates to: MAEWQISVWSTA*MRPASSSTVNT Trigger: CGTGTTCACAGTTGAGGAAGAAGCCGGGCGCATCCATGCTGTGGACCATACGGAGATCTGCCACTCTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CCA 72 bp | GAGGACTGGCTCATCACGTTCTTTCCTGCAGAAGTCTaGGAACAACTGCTTCCTGGCCTGCAGAGGATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: EDWLITFFPAEV*EQLLPGLQRMG Trigger: CCCCATCCTCTGCAGGCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGGAAAGAACGTGATGAGCCAGTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR TCA 72 bp | TCTGCCAGGCCCAGCAACTGTACCAACTCCAGGCGTTaGGGACTTAATACCACCCAGGTCCGAAACTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SARPSNCTNSRR*GLNTTQVRNSR Trigger: CCTTGAGTTTCGGACCTGGGTGGTATTAAGTCCTCAACGCCTGGAGTTGGTACAGTTGCTGGGCCTGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR TCA 72 bp | CTGGACTCAGGAGTTAGAGGAACAGCTCTGCTAATGTaGGCCGGGGGAGAACCACAGCCTACGCAGTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LDSGVRGTALLM*AGGEPQPTQSL Trigger: AAGTGACTGCGTAGGCTGTGGTTCTCCCCCGGCTCACATTAGCAGAGCTGTTCCTCTAACTCCTGAGTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CCA 72 bp | ACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTaGATACTAAAACAAACAAGCTCTGTGCTCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TRSSQLAPWSLP*ILKQTSSVLWL Trigger: GAGCCAGAGCACAGAGCTTGTTTGTTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CCA 72 bp | CCTGAAAGAACTCTCCACAAGGCTTTTGATGGACGATaGGCACCACCTGACAAGGCCTCAGCGCTGCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: PERTLHKAFDGR*APPDKASALPQ Trigger: TTGTGGCAGCGCTGAGGCCTTGTCAGGTGGTGCCCATCGTCCATCAAAAGCCTTGTGGAGAGTTCTTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR TCA 72 bp | TGGAAGAGAAGCCTGCTTGGAGGAAATGCACTGGAGTaGGAAGGTATTTTAGCGCCAGGCCCCTGGACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: WKRSLLGGNALE*EGILAPGPWTQ Trigger: CTGAGTCCAGGGGCCTGGCGCTAAAATACCTTCTCACTCCAGTGCATTTCCTCCAAGCAGGCTTCTCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CCA 72 bp | TTCCTCGCCTGCACCCTCCCAGACCGCATTTCCTCATaGCTGTGCTATCAGCTGTCTTGCTTATTGGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLACTLPDRISS*LCYQLSCLLVW Trigger: CCAAACCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTGCAGGCGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR TCA 72 bp | CCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTaGACCACATGCCTCACCTGCTGCAGTTCCTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: PGFQPANVQVSC*TTCLTCCSSYE Trigger: TTCATAGGAACTGCAGCAGGTGAGGCATGTGGTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR TCA 72 bp | TGTTGTGGGAACTGTCGGATTAGCTGGACAATCTGCTaGGTAGCCTCTTGTCGGGAAGGAAGAACCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CCGNCRISWTIC*VASCREGRTRA Trigger: AGCCCTGGTTCTTCCTTCCCGACAAGAGGCTACTCAGCAGATTGTCCAGCTAATCCGACAGTTCCCACAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128716.2 |
||
| 3UTR CCA 72 bp | CCTGTTCGCTCCGAGAGGCAAAGACAGGAAGTTCCTTaGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PVRSERQRQEVP*LGSCHSKSVTV Trigger: GACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAGCGAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CCA 72 bp | CCTAGAGGAGGAACTCATGTACTGCTGCACAGAGTGTaGAATCAGAGGCATAGCGAGCCTAGGACTCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRGGTHVLLHRV*NQRHSEPRTQA Trigger: AGCTTGAGTCCTAGGCTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAGTACATGAGTTCCTCCTCTAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCTATCTGGCAGCACATTaGATCCCTGTAGCTTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: RVELHTLTRSSQLAPWSLYLAAH*IPVALT Trigger: TGTTAAAGCTACAGGGATCAAATGTGCTGCCAGATA...GAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR GCA 72 bp | TGTTCAGCTTATTCCGTGTACCCCCTTGGTGCGTGGTaGCTAACCTCCAAATGGCTATGTTCCAGATGGATG | + |
|
Preference number: 3 (lower is better) Translates to: CSAYSVYPLGAW*LTSKWLCSRWM Trigger: CATCCATCTGGAACATAGCCATTTGGAGGTTAGGCACCACGCACCAAGGGGGTACACGGAATAAGCTGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR GCA 72 bp | GCCTGCACCCTCCCAGACCGCATTTCCTCATGGCTGTaGTATCAGCTGTCTTGCTTATTGGTTTGGCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: ACTLPDRISSWL*YQLSCLLVWHF Trigger: AAAATGCCAAACCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR GCA 72 bp | AGTCACAAAAGAGGACTGGCTCATCACGTTCTTTCCTaGAGAAGTCTGGGAACAACTGCTTCCTGGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SHKRGLAHHVLS*RSLGTTASWPA Trigger: TGCAGGCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGGAAAGAACGTGATGAGCCAGTCCTCTTTTGTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR GCA 72 bp | GGACTGCTACGCTGTACTCTCTGGTGTTTTTCCACTTaGTTGTCGAAGTTCCTGGAAGAGAAGCCTGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GLLRCTLWCFST*LSKFLEEKPAW Trigger: CCAAGCAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAGCAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CCA 72 bp | GGGCTCAGAACTGCAGGACTGCTACGCTGTACTCTCTaGTGTTTTTCCACTTGCTTGTCGAAGTTCCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLRTAGLLRCTL*CFSTCLSKFLE Trigger: TTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAGCAGTCCTGCAGTTCTGAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAATATCTGGCAGCACATTaGATCCCTGTAGCTTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: TLTRSSQLAPWSLPWILKYLAAH*IPVALT Trigger: TGTTAAAGCTACAGGGATCAAATGTGCTGCCAGATA...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGCAGCTATGTGAACAATaGGAGAATATCTGGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PSQTAFPHGCAISCLAYWQLCEQ*ENIWQH Trigger: GTGCTGCCAGATATTCTCCAATTGTTCACATAGCTG...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGTGTCCAGGTTTCCTGTaGAACCACATGCCTCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: WAICSAPFVCTHTCNTHMCPGFL*NHMPHL Trigger: CAGGTGAGGCATGTGGTTCAACAGGAAACCTGGACA...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CCA 72 bp | CACAGTCGCCATCTTGTTGGAGTCACAAAAGAGGACTaGCTCATCACGTTCTTTCCTGCAGAAGTCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HSRHLVGVTKED*LITFFPAEVWE Trigger: TTCCCAGACTTCTGCAGGAAAGAACGTGATGAGCCAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CCA 72 bp | ATTCCAGTGGGGCAGTCAACACAGTCGCCATCTTGTTaGAGTCACAAAAGAGGACTGGCTCATCACGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: IPVGQSTQSPSC*SHKRGLAHHVL Trigger: AAGAACGTGATGAGCCAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGTGTTGACTGCCCCACTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR GCA 72 bp | CTGAGTAAGGCTCCTCTATTTAAACAATTTGCCATGTaGCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSKAPLFKQFAM*PGFQPANVQVS Trigger: GGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAATTGTTTAAATAGAGGAGCCTTACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAATATCTGGCAGCACATTaGATCCCTGTAGCTTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKYLAAH*IPVALT Trigger: TGTTAAAGCTACAGGGATCAAATGTGCTGCCAGATA...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR GCA 72 bp | ACATTTGTTTTCCTAGAGGAGGAACTCATGTACTGCTaGACAGAGTGTGGAATCAGAGGCATAGCGAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: TFVFLEEELMYC*TECGIRGIASL Trigger: TAGGCTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAGTACATGAGTTCCTCCTCTAGGAAAACAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR GCA 72 bp | TTCCACTTGCTTGTCGAAGTTCCTGGAAGAGAAGCCTaGTTGGAGGAAATGCACTGGAGTGAGAAGGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: FHLLVEVPGREA*LEEMHWSEKVF Trigger: AAATACCTTCTCACTCCAGTGCATTTCCTCCAAGCAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CCA 72 bp | CCCTTTAAAACATTATTTAAGGGCTGGAGTGCTCAGTaGTTAAGAGCACTGACTGCTCATCCAGAGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PFKTLFKGWSAQ*LRALTAHPEVL Trigger: CAGGACCTCTGGATGAGCAGTCAGTGCTCTTAACCACTGAGCACTCCAGCCCTTAAATAATGTTTTAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 |
||
| 3UTR CCA 72 bp | ACTTGCTTGTCGAAGTTCCTGGAAGAGAAGCCTGCTTaGAGGAAATGCACTGGAGTGAGAAGGTATTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: TCLSKFLEEKPA*RKCTGVRRYFS Trigger: GCTAAAATACCTTCTCACTCCAGTGCATTTCCTCCAAGCAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTGTGCTATCAGCTGTCTaGCTTATTGGTTTGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPVLSAV*LIGLAF Trigger: AAATGCCAAACCAATAAGCAAGACAGCTGATAGCAC...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTCTCTATTTAAACAATTaGCCATGTGCCCTGGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPLYLNN*PCALDS Trigger: GGAATCCAGGGCACATGGCAAATTGTTTAAATAGAG...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGTCACTTGAACAAGCAAACAGCTGGTCTTCTAATGCACCTATTTAAAGCATGTGGGTGCTGGGAATaGAACCCGGGTCCTATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: WSHLNKQTAGLLMHLFKACGCWE*NPGPIE Trigger: TTCAATAGGACCCGGGTTCAATTCCCAGCACCCACA...TGCTTTAAATAGGTGCATTAGAAGACCAGCTGTTTGCTTGTTCAAGTGACTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR CCA 72 bp | GTTTTCTTCAAGAGCACATTAAGAGCTCTTAACCACTaGGCCATCTGTTCAGCACCCTTTGTGTGTACACAC | + |
|
Preference number: 3 (lower is better) Translates to: VFFKSTLRALNH*AICSAPFVCTH Trigger: GTGTGTACACACAAAGGGTGCTGAACAGATGGCCCAGTGGTTAAGAGCTCTTAATGTGCTCTTGAAGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CCA 72 bp | CCATCTCACTGGCCCTTTAAAACATTATTTAAGGGCTaGAGTGCTCAGTGGTTAAGAGCACTGACTGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: PSHWPFKTLFKG*SAQWLRALTAH Trigger: ATGAGCAGTCAGTGCTCTTAACCACTGAGCACTCCAGCCCTTAAATAATGTTTTAAAGGGCCAGTGAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 |
||
| 3UTR-3UTR CAA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTGTCTTGCTTATTGGTTaGGCATTTTGTCAGGTTATG | + |
|
Preference number: 3 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPVLLIG*AFCQVM Trigger: CATAACCTGACAAAATGCCAAACCAATAAGCAAGAC...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR TCA 72 bp | AACCTCCAAATGGCTATGTTCCAGATGGATGTCTCATaGCAGTTACGAAACCCCTTCATGAAGAAGGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NLQMAMFQMDVS*QLRNPFMKKEG Trigger: ACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACATCCATCTGGAACATAGCCATTTGGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CCA 72 bp | ATGTGGCAAGTGCTTTTACCCACTAAGCCATCTCACTaGCCCTTTAAAACATTATTTAAGGGCTGGAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MWQVLLPTKPSH*PFKTLFKGWSA Trigger: AGCACTCCAGCCCTTAAATAATGTTTTAAAGGGCCAGTGAGATGGCTTAGTGGGTAAAAGCACTTGCCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 |
||
| 3UTR-3UTR CAA 90 bp | CTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACAAGACAGGAAGTTCCTaGGTTAGGGTCATGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LMTVTKPLHEEGRCYFPNKTGSS*VRVMSQ Trigger: CTGTGACATGACCCTAACCAAGGAACTTCCTGTCTT...GTTAGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTGAGCAAAGTCTTATTTaGCTCACTAAACTTCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPEQSLI*LTKLHF Trigger: GAAGTGAAGTTTAGTGAGCAAAATAAGACTTTGCTC...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR TCA 72 bp | GATCTCCTTTTCCATTTTTATGTGGGCTCTAGGGATTaGATCCAGCTCACCAGTTTATGTGGCAAGTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DLLFHFYVGSRD*IQLTSLCGKCF Trigger: AAAGCACTTGCCACATAAACTGGTGAGCTGGATTCAATCCCTAGAGCCCACATAAAAATGGAAAAGGAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 |
||
| 3UTR CCA 72 bp | ACCTTATGCACTCAGATCTCCTTTTCCATTTTTATGTaGGCTCTAGGGATTGAATCCAGCTCACCAGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: TLCTQISFSIFM*ALGIESSSPVY Trigger: ATAAACTGGTGAGCTGGATTCAATCCCTAGAGCCCACATAAAAATGGAAAAGGAGATCTGAGTGCATAAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 |
||
| 3UTR TCA 72 bp | TTTTTGTGCTTCTTTGAGTCTCTGTCAACTTTAACCTaGTTAGCTTTCTCCTCAGGGGATTCAAACACAACA | + |
|
Preference number: 3 (lower is better) Translates to: FLCFFESLSTLT*LAFSSGDSNTT Trigger: TGTTGTGTTTGAATCCCCTGAGGAGAAAGCTAATCAGGTTAAAGTTGACAGAGACTCAAAGAAGCACAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGACAGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGTGCTGGGGTGAGGGCTaGGCACTTTCCGGCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGQGRTAHSDPFQPAGSLCWGEG*ALSGLW Trigger: CCACAAGCCGGAAAGTGCGCAGCCCTCACCCCAGCA...CAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCTGTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTACGATGGGCACCACCTaGCAAGGCCTCAGCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRTMGTT*QGLSAA Trigger: GGCAGCGCTGAGGCCTTGTCAGGTGGTGCCCATCGT...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCCAATGTCCAGGTTTCCTGTTGAACCACATGCCTCACCTGCTGCAGTTACGATGGGCACCACCTaGCAAGGCCTCAGCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQPMSRFPVEPHASPAAVTMGTT*QGLSAA Trigger: GGCAGCGCTGAGGCCTTGTCAGGTGGTGCCCATCGT...AACTGCAGCAGGTGAGGCATGTGGTTCAACAGGAAACCTGGACATTGGCTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGACAGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGAGTTCTTGGCCTCTTaGGCCTCCTTTCTAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGQGRTAHSDPFQPAGSLEFLAS*ASFLTA Trigger: GGCAGTTAGAAAGGAGGCTCAAGAGGCCAAGAACTC...CAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCTGTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTTGCTGGGGTGAGGGCTaGGCACTTTCCGGCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRCWGEG*ALSGLW Trigger: CCACAAGCCGGAAAGTGCGCAGCCCTCACCCCAGCA...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTTCCTCCAAAGCCTCTCAAGGTaGCCAGCCCAGGGAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EMAFFTAMAQGSRPRPFLQSLSR*PAQGER Trigger: CCTCTCTCCCTGGGCTGGGCACCTTGAGAGGCTTTG...GAGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTTCCTCGGACGGTGTAGATGCTaGGGTGAGGGCTGCGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EMAFFTAMAQGSRPRPFLGRCRC*GEGCAL Trigger: AAGTGCGCAGCCCTCACCCCAGCATCTACACCGTCC...GAGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGACAGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGCTGCTGCACAGAGTGTaGAATCAGAGGCATAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGQGRTAHSDPFQPAGSLLLHRV*NQRHSE Trigger: CTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAG...CAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCTGTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTTCCTCGGAACAACTGCTTCCTaGCCTGCAGAGGATGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EMAFFTAMAQGSRPRPFLGTTAS*PAEDGG Trigger: GCCCCCATCCTCTGCAGGCCAGGAAGCAGTTGTTCC...GAGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCAACTGTGAACACGTCTaGCAGGCCCAGCAACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RVELHTLTRSSQLAPWSLNCEHV*QAQQLY Trigger: GTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTT...GAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTGAACTGCTGGGGTGAGGGCTaGGCACTTTCCGGCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICHVPWIPASQCPGFLLNCWGEG*ALSGLW Trigger: CCACAAGCCGGAAAGTGCGCAGCCCTCACCCCAGCA...GTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCCAATGTCCAGGTTTCCTGTTGAACCACATGCCTCACCTGCTGCAGTTCAAAGCCTCTCAAGGTaGCCAGCCCAGGGAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQPMSRFPVEPHASPAAVQSLSR*PAQGER Trigger: CCTCTCTCCCTGGGCTGGGCACCTTGAGAGGCTTTG...AACTGCAGCAGGTGAGGCATGTGGTTCAACAGGAAACCTGGACATTGGCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAAAACTGCTTCCTGGCCTaGAGAGGATGGGGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLTRSSQLAPWSLPWILKNCFLA*RGWGQS Trigger: GCTTTGCCCCCATCCTCTGCAGGCCAGGAAGCAGTT...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCCAATGTCCAGGTTTCCTGTTGAACCACATGCCTCACCTGCTGCAGTTGGAACAACTGCTTCCTaGCCTGCAGAGGATGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQPMSRFPVEPHASPAAVGTTAS*PAEDGG Trigger: GCCCCCATCCTCTGCAGGCCAGGAAGCAGTTGTTCC...AACTGCAGCAGGTGAGGCATGTGGTTCAACAGGAAACCTGGACATTGGCTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTGGAACAACTGCTTCCTaGCCTGCAGAGGATGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRGTTAS*PAEDGG Trigger: GCCCCCATCCTCTGCAGGCCAGGAAGCAGTTGTTCC...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCTCTAGAGGTAATACATaGCTCTCGCCAACCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVELHTLTRSSQLAPWSLSRGNT*LSPTSR Trigger: CCTGGAGGTTGGCGAGAGTCATGTATTACCTCTAGA...GAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTTAGAACGATGGGCACCACCTaGCAAGGCCTCAGCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVPWLGSCHSKSVTVRVRTMGTT*QGLSAA Trigger: GGCAGCGCTGAGGCCTTGTCAGGTGGTGCCCATCGT...TCTAACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | CACCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGACGGTGTAGATGCTaGGGTGAGGGCTGCGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HPPRPHFLMAVLSAVLLIGRCRC*GEGCAL Trigger: AAGTGCGCAGCCCTCACCCCAGCATCTACACCGTCC...AATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCGAAGAGAAGCCTGCTTaGAGGAAATGCACTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVELHTLTRSSQLAPWSLEEKPA*RKCTGV Trigger: CACTCCAGTGCATTTCCTCCAAGCAGGCTTCTCTTC...GAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCAACTGTGAACACGTCTGCCAGGCCCAGCAACTGTACCAACTCCAGGCGTACAGAACCAGGGCAGTaGTTGGCATCTATGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVNTSARPSNCTNSRRTEPGQ*LASMSV Trigger: AACGCTCATAGATGCCAATCACTGCCCTGGTTCTGT...ACGCCTGGAGTTGGTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGCTTCTTCCTCAACTGTaGACACGTCTGCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSQTAFPHGCAISCLAYWLLPQL*TRLPGP Trigger: TGGGCCTGGCAGACGTGTTCACAGTTGAGGAAGAAG...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAAGAGCTCGGAGTAAGATaGATGGTCAGAGTACGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLTRSSQLAPWSLPWILKELGVR*MVRVRD Trigger: GTCCCGTACTCTGACCATTCATCTTACTCCGAGCTC...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCACCGTGTGGTCACAGTaGATGTGGGTTAAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVELHTLTRSSQLAPWSLTVWSQ*MWVKKK Trigger: CTTCTTCTTAACCCACATGCACTGTGACCACACGGT...GAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGACAGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGAGGAAGAACCAGGGCTaGATTGCAATTAGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGQGRTAHSDPFQPAGSLRKNQG*IAISVV Trigger: GACAACACTAATTGCAATCCAGCCCTGGTTCTTCCT...CAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCTGTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGCCGGGGGAGAACCACAGCCTACGCAGTCACTTTGGTTCCCTCTCGCTGAGGAAGAACCAGGGCTaGATTGCAATTAGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CEPGENHSLRSHFGSLSLRKNQG*IAISVV Trigger: GACAACACTAATTGCAATCCAGCCCTGGTTCTTCCT...CAGCGAGAGGGAACCAAAGTGACTGCGTAGGCTGTGGTTCTCCCCCGGCTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACACTGGCCTGCAGAGGATaGGGGCAAAGCCTCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLFQCLFMVSCSLREAKTLACRG*GQSLSR Trigger: CCTTGAGAGGCTTTGCCCCCATCCTCTGCAGGCCAG...TGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 72 bp | ACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTaGGTCTCTCCCCTGGATACTAAAACAAACAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAHSDPFQPAGS*VSPLDTKTNKL Trigger: GAGCTTGTTTGTTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | CCACAAAAGCACGGAGCTCGGAGTAAGATGAATGGTCAGAGTACGGGACGGTGTAGCTGGACAATCTGCTaGGTAGCCTCTTGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQKHGARSKMNGQSTGRCSWTIC*VASCRE Trigger: TTCCCGACAAGAGGCTACTCAGCAGATTGTCCAGCT...ACACCGTCCCGTACTCTGACCATTCATCTTACTCCGAGCTCCGTGCTTTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTGAACCTTCTTCCTCAACTGTaGACACGTCTGCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ICHVPWIPASQCPGFLLNLLPQL*TRLPGP Trigger: TGGGCCTGGCAGACGTGTTCACAGTTGAGGAAGAAG...GTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTGAGCTCGGAGTAAGATaGATGGTCAGAGTACGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRELGVR*MVRVRD Trigger: GTCCCGTACTCTGACCATTCATCTTACTCCGAGCTC...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGGAGTTCTTGGCCTCTTaGGCCTCCTTTCTAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSQTAFPHGCAISCLAYWEFLAS*ASFLTA Trigger: GGCAGTTAGAAAGGAGGCTCAAGAGGCCAAGAACTC...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | CACCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTCAGTGCTTAGACACCTaGAGGCGACGATGCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPPRPHFLMAVLSAVLLIQCLDT*RRRCKR Trigger: CCTCTTGCATCGTCGCCTGCAGGTGTCTAAGCACTG...AATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGACAGGGTAGAACTGCACACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGAACTCAAGGGCTAGTTaGTCCAGCAGTGATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGQGRTAHSDPFQPAGSLNSRAS*SSSDSF Trigger: AAAAGAATCACTGCTGGAGCAACTAGCCCTTGAGTT...CAAGGAGCCAGCTGGCTGGAACGGGTCAGAGTGTGCAGTTCTACCCTGTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTAACTGTGAACACGTCTaGCAGGCCCAGCAACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRNCEHV*QAQQLY Trigger: GTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTT...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTTAGACAAAGCCTCTCAAGGTaGCCAGCCCAGGGAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVPWLGSCHSKSVTVRVRQSLSR*PAQGER Trigger: CCTCTCTCCCTGGGCTGGGCACCTTGAGAGGCTTTG...TCTAACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGAAGTCTGGGAACAACTaGTTCCTGGCCTGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSQTAFPHGCAISCLAYWKSGNN*FLACRG Trigger: TCCTCTGCAGGCCAGGAAGCAGTTGTTCCCAGACTT...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTCCTGGAAGAGAAGCCTaGTTGGAGGAAATGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRPGREA*LEEMHW Trigger: CCAGTGCATTTCCTCCAAGCAGGCTTCTCTTCCAGG...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTTAGAGGACGGTGTAGATGCTaGGGTGAGGGCTGCGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EVPWLGSCHSKSVTVRVRGRCRC*GEGCAL Trigger: AAGTGCGCAGCCCTCACCCCAGCATCTACACCGTCC...TCTAACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTCTGCTGCACAGAGTGTaGAATCAGAGGCATAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRLLHRV*NQRHSE Trigger: CTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAG...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 72 bp | ACTCAAGCTGTCCTGAAAGAACTCTCCACAAGGCTTTaGATGGACGATGGGCACCACCTGACAAGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQAVLKELSTRL*MDDGHHLTRPQ Trigger: CTGAGGCCTTGTCAGGTGGTGCCCATCGTCCATCAAAAGCCTTGTGGAGAGTTCTTTCAGGACAGCTTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR TCA 90 bp | AACTGCTTCCTGGCCTGCAGAGGATGGGGGCAAAGCCTCTCAAGGTGCCCAGCCTCTAGATACAAAGTATaGATCTGTTTCCCCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: NCFLACRGWGQSLSRCPASRYKV*ICFPSI Trigger: GATACTGGGGAAACAGATTCATACTTTGTATCTAGA...GGCTGGGCACCTTGAGAGGCTTTGCCCCCATCCTCTGCAGGCCAGGAAGCAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR TCA 90 bp | CTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGCTGGACAATCTGCTaGGTAGCCTCTTGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LREAKTGSSLVRVMSQQVSWTIC*VASCRE Trigger: TTCCCGACAAGAGGCTACTCAGCAGATTGTCCAGCT...GACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | TCACTCTATAGAACAGGCTGGCCTCAAACTCAGAAATCCGCCTTCCTCTGCCTCAGCTGGACAATCTGCTaGGTAGCCTCTTGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLYRTGWPQTQKSAFLCLSWTIC*VASCRE Trigger: TTCCCGACAAGAGGCTACTCAGCAGATTGTCCAGCT...GAGGCAGAGGAAGGCGGATTTCTGAGTTTGAGGCCAGCCTGTTCTATAGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAACAAGCTCTGTGCTCTGGCTCCCTAATTCAAACTTGTGGGGGTGGGGGACCAACTCCAGGCGTTaGGGACTTAATACCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQTSSVLWLPNSNLWGWGTNSRR*GLNTTQ Trigger: CTGGGTGGTATTAAGTCCTCAACGCCTGGAGTTGGT...CCCCCACCCCCACAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | TTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGCTTCTTCCTCAACTGTaGACACGTCTGCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FMVSCSLREAKTGSSLVRLLPQL*TRLPGP Trigger: TGGGCCTGGCAGACGTGTTCACAGTTGAGGAAGAAG...CCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAACAAGCTCTGTGCTCTGGCTCCCTAATTCAAACTTGTGGGGGTGGGGGGAGCTCGGAGTAAGATaGATGGTCAGAGTACGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQTSSVLWLPNSNLWGWGELGVR*MVRVRD Trigger: GTCCCGTACTCTGACCATTCATCTTACTCCGAGCTC...CCCCCACCCCCACAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTTT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAAGGAAATGCACTGGAGTaGGAAGGTATTTTAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLTRSSQLAPWSLPWILKGNALE*EGILAP Trigger: TGGCGCTAAAATACCTTCTCACTCCAGTGCATTTCC...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAACTGTGAACACGTCTaGCAGGCCCAGCAACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRNCEHV*QAQQLY Trigger: GTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTT...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTAACTGCTTCCTGGCCTaGAGAGGATGGGGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPNCFLA*RGWGQS Trigger: GCTTTGCCCCCATCCTCTGCAGGCCAGGAAGCAGTT...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAACCTGCTTGGAGGAAATaGACTGGAGTGAGAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLTRSSQLAPWSLPWILKPAWRK*TGVRRY Trigger: ATACCTTCTCACTCCAGTGCATTTCCTCCAAGCAGG...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGCCTGGAAGAGAAGCCTaGTTGGAGGAAATGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRPGREA*LEEMHW Trigger: CCAGTGCATTTCCTCCAAGCAGGCTTCTCTTCCAGG...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | ACACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACATGGCAGATCTCCGTATaGTCCACAGCATGGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLFQCLFMVSCSLREAKTWQISV*STAWMR Trigger: GCGCATCCATGCTGTGGACCATACGGAGATCTGCCA...TGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGTTTCCTGCAGAAGTCTaGGAACAACTGCTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSQTAFPHGCAISCLAYWFPAEV*EQLLPG Trigger: GCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGGAAA...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAACTCACTCTATAGAACAGGCTGGCCTCAAACTCAGAAATCCGCCTTCCTCTAGAGGTAATACATaGCTCTCGCCAACCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGTHSIEQAGLKLRNPPSSRGNT*LSPTSR Trigger: CCTGGAGGTTGGCGAGAGTCATGTATTACCTCTAGA...GGAAGGCGGATTTCTGAGTTTGAGGCCAGCCTGTTCTATAGAGTGAGTTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTAGCTGGACAATCTGCTaGGTAGCCTCTTGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGSSLVRVMSQQVSDSQGSWTIC*VASCRE Trigger: TTCCCGACAAGAGGCTACTCAGCAGATTGTCCAGCT...ACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| CDS-3UTR TCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGTCAAACACAACACCCTaGGTTCTTGGCCTCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRSNTTP*VLGLLS Trigger: GCTCAAGAGGCCAAGAACTCAGGGTGTTGTGTTTGA...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| CDS-3UTR TCA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAACTGTCAACTTTAACCTaGTTAGCTTTCTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTRSSQLAPWSLPWILKLSTLT*LAFSSG Trigger: CCCTGAGGAGAAAGCTAATCAGGTTAAAGTTGACAG...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAAAGTCTGGGAACAACTaGTTCCTGGCCTGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLFQCLFMVSCSLREAKTKSGNN*FLACRG Trigger: TCCTCTGCAGGCCAGGAAGCAGTTGTTCCCAGACTT...TGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGCCTGCTTGGAGGAAATaGACTGGAGTGAGAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PSQTAFPHGCAISCLAYWPAWRK*TGVRRY Trigger: ATACCTTCTCACTCCAGTGCATTTCCTCCAAGCAGG...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACACCTGGAAGAGAAGCCTaGTTGGAGGAAATGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLFQCLFMVSCSLREAKTPGREA*LEEMHW Trigger: CCAGTGCATTTCCTCCAAGCAGGCTTCTCTTCCAGG...TGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTTGGCAGATCTCCGTATaGTCCACAGCATGGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPWQISV*STAWMR Trigger: GCGCATCCATGCTGTGGACCATACGGAGATCTGCCA...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGTGGCAGATCTCCGTATaGTCCACAGCATGGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WAICSAPFVCTHTCNTHMWQISV*STAWMR Trigger: GCGCATCCATGCTGTGGACCATACGGAGATCTGCCA...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTGAACTTTCCTGCAGAAGTCTaGGAACAACTGCTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICHVPWIPASQCPGFLLNFPAEV*EQLLPG Trigger: GCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGGAAA...GTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGCAGTCGCCATCTTGTTaGAGTCACAAAAGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSQTAFPHGCAISCLAYWQSPSC*SHKRGL Trigger: CAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTG...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGGAAGAGAAGCCTGCTTaGAGGAAATGCACTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVSVPLHGFLFAPRGKDREEKPA*RKCTGV Trigger: CACTCCAGTGCATTTCCTCCAAGCAGGCTTCTCTTC...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTGAACGAAGAGAAGCCTGCTTaGAGGAAATGCACTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ICHVPWIPASQCPGFLLNEEKPA*RKCTGV Trigger: CACTCCAGTGCATTTCCTCCAAGCAGGCTTCTCTTC...GTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 72 bp | GAGAATTCCAGTGGGGCAGTCAACACAGTCGCCATCTaGTTGGAGTCACAAAAGAGGACTGGCTCATCACGT | + |
|
Preference number: 4 (lower is better) Translates to: ENSSGAVNTVAI*LESQKRTGSSR Trigger: ACGTGATGAGCCAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGTGTTGACTGCCCCACTGGAATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CAA 72 bp | CTGCTACGCTGTACTCTCTGGTGTTTTTCCACTTGCTaGTCGAAGTTCCTGGAAGAGAAGCCTGCTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRCTLWCFSTC*SKFLEEKPAWR Trigger: CCTCCAAGCAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAATCTAGAGGTAATACATaGCTCTCGCCAACCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKSRGNT*LSPTSR Trigger: CCTGGAGGTTGGCGAGAGTCATGTATTACCTCTAGA...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | TGGAACTCACTCTATAGAACAGGCTGGCCTCAAACTCAGAAATCCGCCTTCCTCACAGAACCAGGGCAGTaGTTGGCATCTATGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: WNSLYRTGWPQTQKSAFLTEPGQ*LASMSV Trigger: AACGCTCATAGATGCCAATCACTGCCCTGGTTCTGT...GAGGAAGGCGGATTTCTGAGTTTGAGGCCAGCCTGTTCTATAGAGTGAGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR TCA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTAGCTGGACAATCTGCTaGGTAGCCTCTTGTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPSWTIC*VASCRE Trigger: TTCCCGACAAGAGGCTACTCAGCAGATTGTCCAGCT...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTACCAACTCCAGGCGTTaGGGACTTAATACCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPTNSRR*GLNTTQ Trigger: CTGGGTGGTATTAAGTCCTCAACGCCTGGAGTTGGT...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAACAAGCTCTGTGCTCTGGCTCCCTAATTCAAACTTGTGGGGGTGGGGGGGAAATGCACTGGAGTaGGAAGGTATTTTAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQTSSVLWLPNSNLWGWGGNALE*EGILAP Trigger: TGGCGCTAAAATACCTTCTCACTCCAGTGCATTTCC...CCCCCACCCCCACAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTTT 50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTGGCATCACGTTCTTTCCTaGAGAAGTCTGGGAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: PSQTAFPHGCAISCLAYWHHVLS*RSLGTT Trigger: AGTTGTTCCCAGACTTCTGCAGGAAAGAACGTGATG...CCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTTCCTCTGGTGTTTTTCCACTTaGTTGTCGAAGTTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EMAFFTAMAQGSRPRPFLWCFST*LSKFLE Trigger: TTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCA...GAGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAATGGTGTTTTTCCACTTaGTTGTCGAAGTTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLTRSSQLAPWSLPWILKWCFST*LSKFLE Trigger: TTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCA...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCAACTGTGAACACGTCTGCCAGGCCCAGCAACTGTACCAACTCCAGGCGTTTCCTTCAGCATGGATaGTGTATATCGAAAATCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVNTSARPSNCTNSRRFLQHG*CISKIT Trigger: GGTGATTTTCGATATACACCATCCATGCTGAAGGAA...ACGCCTGGAGTTGGTACAGTTGCTGGGCCTGGCAGACGTGTTCACAGTTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAATTTCCTGCAGAAGTCTaGGAACAACTGCTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKFPAEV*EQLLPG Trigger: GCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGGAAA...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGCAGTCGCCATCTTGTTaGAGTCACAAAAGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRQSPSC*SHKRGL Trigger: CAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTG...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 72 bp | AATTCCAGTGGGGCAGTCAACACAGTCGCCATCTTGTaGGAGTCACAAAAGAGGACTGGCTCATCACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSSGAVNTVAIL*ESQKRTGSSRS Trigger: AGAACGTGATGAGCCAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGTGTTGACTGCCCCACTGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| 3UTR CAA 72 bp | AGGACTGCTACGCTGTACTCTCTGGTGTTTTTCCACTaGCTTGTCGAAGTTCCTGGAAGAGAAGCCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTATLYSLVFFH*LVEVPGREACL Trigger: CAAGCAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAGCAGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR TCA 90 bp | GGTAAGAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTAGTGATTGGCATCTATaGGCGTTACAGTCATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKRWLSLLLWLKVPGPGRSDWHL*ALQSWF Trigger: AAACCATGACTGTAACGCTCATAGATGCCAATCACT...ACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTCTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGACAGAACCAGGGCAGTaGTTGGCATCTATGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: WAICSAPFVCTHTCNTHMTEPGQ*LASMSV Trigger: AACGCTCATAGATGCCAATCACTGCCCTGGTTCTGT...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | CTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCGAACTCATGTACTGCTaGACAGAGTGTGGAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LREAKTGSSLVRVMSQQVELMYC*TECGIR Trigger: TCTGATTCCACACTCTGTGCAGCAGTACATGAGTTC...GACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGGAACTCATGTACTGCTaGACAGAGTGTGGAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRELMYC*TECGIR Trigger: TCTGATTCCACACTCTGTGCAGCAGTACATGAGTTC...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACACCTGCTTGGAGGAAATaGACTGGAGTGAGAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLFQCLFMVSCSLREAKTPAWRK*TGVRRY Trigger: ATACCTTCTCACTCCAGTGCATTTCCTCCAAGCAGG...TGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTGAACAGGAAGAACCAGGGCTaGATTGCAATTAGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ICHVPWIPASQCPGFLLNRKNQG*IAISVV Trigger: GACAACACTAATTGCAATCCAGCCCTGGTTCTTCCT...GTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTCTGGCCTGCAGAGGATaGGGGCAAAGCCTCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLMTVTKPLHEEGRCYFPLACRG*GQSLSR Trigger: CCTTGAGAGGCTTTGCCCCCATCCTCTGCAGGCCAG...AGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGCTACGCTGTACTCTCTaGTGTTTTTCCACTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRLRCTL*CFSTCL Trigger: CAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAG...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAACTGTCAACTTTAACCTaGTTAGCTTTCTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKLSTLT*LAFSSG Trigger: CCCTGAGGAGAAAGCTAATCAGGTTAAAGTTGACAG...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTCTGTCAACTTTAACCTaGTTAGCTTTCTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGSSLVRVMSQQVSDSQGLSTLT*LAFSSG Trigger: CCCTGAGGAGAAAGCTAATCAGGTTAAAGTTGACAG...ACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTGGAAATGCACTGGAGTaGGAAGGTATTTTAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPGNALE*EGILAP Trigger: TGGCGCTAAAATACCTTCTCACTCCAGTGCATTTCC...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | CTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAACTCAAGGGCTAGTTaGTCCAGCAGTGATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LREAKTGSSLVRVMSQQVNSRAS*SSSDSF Trigger: AAAAGAATCACTGCTGGAGCAACTAGCCCTTGAGTT...GACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | TTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGCATCACGTTCTTTCCTaGAGAAGTCTGGGAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: FMVSCSLREAKTGSSLVRHHVLS*RSLGTT Trigger: AGTTGTTCCCAGACTTCTGCAGGAAAGAACGTGATG...CCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAAAGGAAGAACCAGGGCTaGATTGCAATTAGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKRKNQG*IAISVV Trigger: GACAACACTAATTGCAATCCAGCCCTGGTTCTTCCT...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGCAGTCGCCATCTTGTTaGAGTCACAAAAGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: WAICSAPFVCTHTCNTHMQSPSC*SHKRGL Trigger: CAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTG...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTGACCCGTTCCAGCCAGCTGGCTCCTTGGTCTCTCCCCTGGATACTAAAATTTCTCCCTGGTTTCTaGAAAGAGAAACTCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLTRSSQLAPWSLPWILKFLPGF*KEKLIY Trigger: ATAGATGAGTTTCTCTTTCCAGAAACCAGGGAGAAA...TTTTAGTATCCAGGGGAGAGACCAAGGAGCCAGCTGGCTGGAACGGGTCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | TGGAACTCACTCTATAGAACAGGCTGGCCTCAAACTCAGAAATCCGCCTTCCTCAGTGATTGGCATCTATaGGCGTTACAGTCATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WNSLYRTGWPQTQKSAFLSDWHL*ALQSWF Trigger: AAACCATGACTGTAACGCTCATAGATGCCAATCACT...GAGGAAGGCGGATTTCTGAGTTTGAGGCCAGCCTGTTCTATAGAGTGAGTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAGCCTCCTTTCTAACTaGCAAAGCACATTTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRSLLSN*QSTFVF Trigger: GAAAACAAATGTGCTTTGGCAGTTAGAAAGGAGGCT...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAGCTCTGTGCTCTGGCTCCCTAATTCAAACTTGTGGGGGTGGGGGAGCCTCCTTTCTAACTaGCAAAGCACATTTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQTSSVLWLPNSNLWGWGSLLSN*QSTFVF Trigger: GAAAACAAATGTGCTTTGGCAGTTAGAAAGGAGGCT...CCCCCACCCCCACAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGCATCACGTTCTTTCCTaGAGAAGTCTGGGAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: WAICSAPFVCTHTCNTHMHHVLS*RSLGTT Trigger: AGTTGTTCCCAGACTTCTGCAGGAAAGAACGTGATG...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCTTCCTTCAGCATGGATaGTGTATATCGAAAATCACC | + |
|
Preference number: 4 (lower is better) Translates to: LREAKTGSSLVRVMSQQVFLQHG*CISKIT Trigger: GGTGATTTTCGATATACACCATCCATGCTGAAGGAA...GACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| 3UTR CAA 72 bp | CTGGGATTAAAGGCGTGTGCCACCACTGCCCAATCCTaGAGGGTTTCTTTTGGAGTTTGTTTAGGAGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLKACATTAQS*RVSFGVCLGVY Trigger: GTAAACTCCTAAACAAACTCCAAAAGAAACCCTCAAGGATTGGGCAGTGGTGGCACACGCCTTTAATCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR TCA 90 bp | CTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCTCTAGATACAAAGTATaGATCTGTTTCCCCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LREAKTGSSLVRVMSQQVSRYKV*ICFPSI Trigger: GATACTGGGGAAACAGATTCATACTTTGTATCTAGA...GACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGTCTAGATACAAAGTATaGATCTGTTTCCCCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRSRYKV*ICFPSI Trigger: GATACTGGGGAAACAGATTCATACTTTGTATCTAGA...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | CTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACGAGTTCTTGGCCTCTTaGGCCTCCTTTCTAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LMTVTKPLHEEGRCYFPNEFLAS*ASFLTA Trigger: GGCAGTTAGAAAGGAGGCTCAAGAGGCCAAGAACTC...GTTAGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | CACCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTCTTTTTGTGCTTCTTTaGGTCTCTGTCAACTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HPPRPHFLMAVLSAVLLILFVLL*VSVNFN Trigger: GTTAAAGTTGACAGAGACTCAAAGAAGCACAAAAAG...AATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | TTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGACAGTCATGGTTTCTTaGCCAATTTCATCTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FMVSCSLREAKTGSSLVRTVMVS*PISSRG Trigger: ACCTCTAGATGAAATTGGGCAAGAAACCATGACTGT...CCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTAGCCTCCTTTCTAACTaGCAAAGCACATTTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGSSLVRVMSQQVSDSQGSLLSN*QSTFVF Trigger: GAAAACAAATGTGCTTTGGCAGTTAGAAAGGAGGCT...ACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAAGTCTGGGAACAACTaGTTCCTGGCCTGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLMTVTKPLHEEGRCYFPKSGNN*FLACRG Trigger: TCCTCTGCAGGCCAGGAAGCAGTTGTTCCCAGACTT...AGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCCATCTGTTCAGCACCCTTTGTGTGTACACACACATGTAACACACACATGTGGTGTTTTTCCACTTaGTTGTCGAAGTTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WAICSAPFVCTHTCNTHMWCFST*LSKFLE Trigger: TTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCA...CATGTGTGTGTTACATGTGTGTGTACACACAAAGGGTGCTGAACAGATGGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | ACACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACATTCCTTCAGCATGGATaGTGTATATCGAAAATCACC | + |
|
Preference number: 4 (lower is better) Translates to: TLFQCLFMVSCSLREAKTFLQHG*CISKIT Trigger: GGTGATTTTCGATATACACCATCCATGCTGAAGGAA...TGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTCTGCTGCACAGAGTGTaGAATCAGAGGCATAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLMTVTKPLHEEGRCYFPLLHRV*NQRHSE Trigger: CTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAG...AGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | CTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCTTTCTCCCTGGTTTCTaGAAAGAGAAACTCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LREAKTGSSLVRVMSQQVFLPGF*KEKLIY Trigger: ATAGATGAGTTTCTCTTTCCAGAAACCAGGGAGAAA...GACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAGCTCTGTGCTCTGGCTCCCTAATTCAAACTTGTGGGGGTGGGGGTTTCTCCCTGGTTTCTaGAAAGAGAAACTCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KQTSSVLWLPNSNLWGWGFLPGF*KEKLIY Trigger: ATAGATGAGTTTCTCTTTCCAGAAACCAGGGAGAAA...CCCCCACCCCCACAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAAAGCCAATTTTCTCCCTaGTTTCTGGAAAGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKSQFSP*FLERET Trigger: AGTTTCTCTTTCCAGAAACCAGGGAGAAAATTGGCT...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | TGGAACTCACTCTATAGAACAGGCTGGCCTCAAACTCAGAAATCCGCCTTCCTCCAAGGCACAAAGATTTaGAAAACAATGAGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WNSLYRTGWPQTQKSAFLQGTKI*KTMRTF Trigger: GAAGGTCCTCATTGTTTTCCAAATCTTTGTGCCTTG...GAGGAAGGCGGATTTCTGAGTTTGAGGCCAGCCTGTTCTATAGAGTGAGTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR CAA 72 bp | AGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTaGCTTATTGGTTTGGCATTTTGTCAGGTTATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPHFLMAVLSAV*LIGLAFCQVMS Trigger: GCTCATAACCTGACAAAATGCCAAACCAATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 72 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTaGCTAAACACACATCCTACCAAAGCTACACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GDTTQDRTQDFS*LNTHPTKATPL Trigger: TAAAGGTGTAGCTTTGGTAGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTACAGAACCAGGGCAGTaGTTGGCATCTATGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLMTVTKPLHEEGRCYFPTEPGQ*LASMSV Trigger: AACGCTCATAGATGCCAATCACTGCCCTGGTTCTGT...AGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | TTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGTCTAGATACAAAGTATaGATCTGTTTCCCCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: FMVSCSLREAKTGSSLVRSRYKV*ICFPSI Trigger: GATACTGGGGAAACAGATTCATACTTTGTATCTAGA...CCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | CTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACTCAAACACAACACCCTaGGTTCTTGGCCTCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LMTVTKPLHEEGRCYFPNSNTTP*VLGLLS Trigger: GCTCAAGAGGCCAAGAACTCAGGGTGTTGTGTTTGA...GTTAGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGGCATCCCAGCCCCCACATTACAGCTGAGTAAGGCTCCTCTATTTAAACTTTTTGTGCTTCTTTaGGTCTCTGTCAACTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVGIPAPTLQLSKAPLFKLFVLL*VSVNFN Trigger: GTTAAAGTTGACAGAGACTCAAAGAAGCACAAAAAG...TTTAAATAGAGGAGCCTTACTCAGCTGTAATGTGGGGGCTGGGATGCCTACCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | CAATTTTTATGTTGTGTTGTGGGAACTGTCGGATTAGCTGGACAATCTGCTGAGACCGTGTGGTCACAGTaGATGTGGGTTAAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFLCCVVGTVGLAGQSAETVWSQ*MWVKKK Trigger: CTTCTTCTTAACCCACATGCACTGTGACCACACGGT...CTCAGCAGATTGTCCAGCTAATCCGACAGTTCCCACAACACAACATAAAAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128716.2 |
||
| CDS-3UTR GCA 90 bp | AGCACCATGAATTACAATCTGAAAACAAATAACCGACATCTTTTATCTGGGACTAACTGCTTCCTGGCCTaGAGAGGATGGGGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: STMNYNLKTNNRHLLSGTNCFLA*RGWGQS Trigger: GCTTTGCCCCCATCCTCTGCAGGCCAGGAAGCAGTT...AGTCCCAGATAAAAGATGTCGGTTATTTGTTTTCAGATTGTAATTCATGGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | GGGGACACAACTCAGGATAGAACCCAAGACTTCAGCTTGCTAAACACACATCCTAGCCAATTTTCTCCCTaGTTTCTGGAAAGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GDTTQDRTQDFSLLNTHPSQFSP*FLERET Trigger: AGTTTCTCTTTCCAGAAACCAGGGAGAAAATTGGCT...AGGATGTGTGTTTAGCAAGCTGAAGTCTTGGGTTCTATCCTGAGTTGTGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACACCGTGTGGTCACAGTaGATGTGGGTTAAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LMTVTKPLHEEGRCYFPNTVWSQ*MWVKKK Trigger: CTTCTTCTTAACCCACATGCACTGTGACCACACGGT...GTTAGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| 3UTR CAA 72 bp | TTGTTCAGAGGTCAGAAGGCATCAGACCTGAGGAACTaGAGTTATGATCAATTTGATGTTGGTGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFRGQKASDLRN*SYDQFDVGAGN Trigger: GTTTCCAGCACCAACATCAAATTGATCATAACTCAAGTTCCTCAGGTCTGATGCCTTCTGACCTCTGAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 72 bp | AGCAGCTCTTTATTGAGATTGCAGTCAAGTTTAAGATaGCTCAGTTCCACTCCAACTCCTCTGCCTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLLRLQSSLR*LSSTPTPLPFQ Trigger: CTGAAAAGGCAGAGGAGTTGGAGTGGAACTGAGCAATCTTAAACTTGACTGCAATCTCAATAAAGAGCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| 3UTR CAA 72 bp | GAGTCCCCAAAATATTGTATACTGCTGTGGAGTCACTaGAACAAGCAAACAGCTGGTCTTCTAATGCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: ESPKYCILLWSH*NKQTAGLLMHL Trigger: TAGGTGCATTAGAAGACCAGCTGTTTGCTTGTTCAAGTGACTCCACAGCAGTATACAATATTTTGGGGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR TCA 90 bp | AGCACCATGAATTACAATCTGAAAACAAATAACCGACATCTTTTATCTGGGACTACCAACTCCAGGCGTTaGGGACTTAATACCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STMNYNLKTNNRHLLSGTTNSRR*GLNTTQ Trigger: CTGGGTGGTATTAAGTCCTCAACGCCTGGAGTTGGT...AGTCCCAGATAAAAGATGTCGGTTATTTGTTTTCAGATTGTAATTCATGGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACGAACTCATGTACTGCTaGACAGAGTGTGGAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMTVTKPLHEEGRCYFPNELMYC*TECGIR Trigger: TCTGATTCCACACTCTGTGCAGCAGTACATGAGTTC...GTTAGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGAACAAGCAAACAGCTGGTCTTCTAATGCACCTATTTAAAGCACAGCAAAGGAAGAACCAGGGCTaGATTGCAATTAGTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HLNKQTAGLLMHLFKAQQRKNQG*IAISVV Trigger: GACAACACTAATTGCAATCCAGCCCTGGTTCTTCCT...TTGCTGTGCTTTAAATAGGTGCATTAGAAGACCAGCTGTTTGCTTGTTCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR CCA 90 bp | CTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACCTACGCTGTACTCTCTaGTGTTTTTCCACTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LMTVTKPLHEEGRCYFPNLRCTL*CFSTCL Trigger: CAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAG...GTTAGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCATGAATTACAATCTGAAAACAAATAACCGACATCTTTTATCTGGGACTTCAAACACAACACCCTaGGTTCTTGGCCTCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STMNYNLKTNNRHLLSGTSNTTP*VLGLLS Trigger: GCTCAAGAGGCCAAGAACTCAGGGTGTTGTGTTTGA...AGTCCCAGATAAAAGATGTCGGTTATTTGTTTTCAGATTGTAATTCATGGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GTTTACATTTGTGTGTTGCGGGATATAGCAGCAGAGGCATATTTAAAATGTACAACCGTGTGGTCACAGTaGATGTGGGTTAAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VYICVLRDIAAEAYLKCTTVWSQ*MWVKKK Trigger: CTTCTTCTTAACCCACATGCACTGTGACCACACGGT...TGTACATTTTAAATATGCCTCTGCTGCTATATCCCGCAACACACAAATGTAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR GCA 90 bp | CTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACAACTCAAGGGCTAGTTaGTCCAGCAGTGATTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LMTVTKPLHEEGRCYFPNNSRAS*SSSDSF Trigger: AAAAGAATCACTGCTGGAGCAACTAGCCCTTGAGTT...GTTAGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTACAGTCATGGTTTCTTaGCCAATTTCATCTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLMTVTKPLHEEGRCYFPTVMVS*PISSRG Trigger: ACCTCTAGATGAAATTGGGCAAGAAACCATGACTGT...AGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCCCAATCCTTGAGGGTTTCTTTTGGAGTTTGTTTAGGAGTTTACATTTGTTCCTTCAGCATGGATaGTGTATATCGAAAATCACC | + |
|
Preference number: 4 (lower is better) Translates to: HCPILEGFFWSLFRSLHLFLQHG*CISKIT Trigger: GGTGATTTTCGATATACACCATCCATGCTGAAGGAA...CAAATGTAAACTCCTAAACAAACTCCAAAAGAAACCCTCAAGGATTGGGCAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR CCA 90 bp | CTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACCAGGTTCCTTCAGCATaGATGGTGTATATCGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LMTVTKPLHEEGRCYFPNQVPSA*MVYIEN Trigger: ATTTTCGATATACACCATCCATGCTGAAGGAACCTG...GTTAGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAGCCAATTTTCTCCCTaGTTTCTGGAAAGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: CLMTVTKPLHEEGRCYFPSQFSP*FLERET Trigger: AGTTTCTCTTTCCAGAAACCAGGGAGAAAATTGGCT...AGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| 3UTR CAA 72 bp | TTCCTCTTCCAGTTAAAACCACTCAGCAGCTCTTTATaGAGATTGCAGTCAAGTTTAAGATTGCTCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFQLKPLSSSL*RLQSSLRLLSS Trigger: GGAACTGAGCAATCTTAAACTTGACTGCAATCTCAATAAAGAGCTGCTGAGTGGTTTTAACTGGAAGAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR TCA 90 bp | CACTGCCCAATCCTTGAGGGTTTCTTTTGGAGTTTGTTTAGGAGTTTACATTTGTCTAGATACAAAGTATaGATCTGTTTCCCCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: HCPILEGFFWSLFRSLHLSRYKV*ICFPSI Trigger: GATACTGGGGAAACAGATTCATACTTTGTATCTAGA...CAAATGTAAACTCCTAAACAAACTCCAAAAGAAACCCTCAAGGATTGGGCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCATGAATTACAATCTGAAAACAAATAACCGACATCTTTTATCTGGGACTCTACGCTGTACTCTCTaGTGTTTTTCCACTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STMNYNLKTNNRHLLSGTLRCTL*CFSTCL Trigger: CAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAG...AGTCCCAGATAAAAGATGTCGGTTATTTGTTTTCAGATTGTAATTCATGGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR GCA 90 bp | GTTTACATTTGTGTGTTGCGGGATATAGCAGCAGAGGCATATTTAAAATGTACAACAGTCATGGTTTCTTaGCCAATTTCATCTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VYICVLRDIAAEAYLKCTTVMVS*PISSRG Trigger: ACCTCTAGATGAAATTGGGCAAGAAACCATGACTGT...TGTACATTTTAAATATGCCTCTGCTGCTATATCCCGCAACACACAAATGTAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
||
| CDS-3UTR TCA 90 bp | AGCACCATGAATTACAATCTGAAAACAAATAACCGACATCTTTTATCTGGGACTCTTTTTGTGCTTCTTTaGGTCTCTGTCAACTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: STMNYNLKTNNRHLLSGTLFVLL*VSVNFN Trigger: GTTAAAGTTGACAGAGACTCAAAGAAGCACAAAAAG...AGTCCCAGATAAAAGATGTCGGTTATTTGTTTTCAGATTGTAATTCATGGTGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS GCA 90 bp | AGGGGCCGGGCCCAAGTGCTAGACAAACCCACCGTGTGGTCACAGTaGATGTGGGTTAAGAAGAAGAGCCGCGCCGAACCGGCACGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RGRAQVLDKPTVWSQ*MWVKKKSRAEPARR Trigger: GCGCCGTGCCGGTTCGGCGCGGCTCTTCTTCTTAACCCACATGCACTGTGACCACACGGTGGGTTTGTCTAGCACTTGGGCCCGGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000128716.2 |
||
| CDS CCA 90 bp | CGGGCCCAAGTGCTAGACAAACCCACCGTGTGGTCACAGTGCATGTaGGTTAAGAAGAAGAGCCGCGCCGAACCGGCACGGCGCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RAQVLDKPTVWSQCM*VKKKSRAEPARRRL Trigger: GAGCCTGCGCCGTGCCGGTTCGGCGCGGCTCTTCTTCTTAACCCACATGCACTGTGACCACACGGTGGGTTTGTCTAGCACTTGGGCCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000128716.2 |
||
| CDS-3UTR CAA 90 bp | GAGATGGCTTTCTTTACTGCTATGGCTCAAGGTTCCAGGCCCAGGCCGTTCCTCCTGCTGAGTAGCCTCTaGTCGGGAAGGAAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: EMAFFTAMAQGSRPRPFLLLSSL*SGRKNQ Trigger: CTGGTTCTTCCTTCCCGACAAGAGGCTACTCAGCAG...GAGGAACGGCCTGGGCCTGGAACCTTGAGCCATAGCAGTAAAGAAAGCCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTCAGTGCCTCTTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGCTGCTGAGTAGCCTCTaGTCGGGAAGGAAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVSVPLHGFLFAPRGKDRLLSSL*SGRKNQ Trigger: CTGGTTCTTCCTTCCCGACAAGAGGCTACTCAGCAG...CCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAAGAGGCACTGAAACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGCCATGTGCCCTGGATTCCAGCCAGCCAATGTCCAGGTTTCCTGTTGAACCTGCTGAGTAGCCTCTaGTCGGGAAGGAAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ICHVPWIPASQCPGFLLNLLSSL*SGRKNQ Trigger: CTGGTTCTTCCTTCCCGACAAGAGGCTACTCAGCAG...GTTCAACAGGAAACCTGGACATTGGCTGGCTGGAATCCAGGGCACATGGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAACTCATGTACTGCTGCACAGAGTGTGGAATCAGAGGCATAGCGAGCCTACTGCTGAGTAGCCTCTaGTCGGGAAGGAAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: EELMYCCTECGIRGIASLLLSSL*SGRKNQ Trigger: CTGGTTCTTCCTTCCCGACAAGAGGCTACTCAGCAG...TAGGCTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAGTACATGAGTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGCCAATGTCCAGGTTTCCTGTTGAACCACATGCCTCACCTGCTGCAGTTACAGTCGCCATCTTGTaGGAGTCACAAAAGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SQPMSRFPVEPHASPAAVTVAIL*ESQKRT Trigger: AGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGT...AACTGCAGCAGGTGAGGCATGTGGTTCAACAGGAAACCTGGACATTGGCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS TCA 90 bp | GTTACAGTCATGGTTTCTTGCCCAATTTCATCTAGAGGTAATACATaGCTCTCGCCAACCTCCAGGGCCCGGATCCAGTGCTTAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: VTVMVSCPISSRGNT*LSPTSRARIQCLDT Trigger: GGTGTCTAAGCACTGGATCCGGGCCCTGGAGGTTGGCGAGAGTCATGTATTACCTCTAGATGAAATTGGGCAAGAAACCATGACTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 |
||
| CDS-3UTR CAA 90 bp | TTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGACAGTCGCCATCTTGTaGGAGTCACAAAAGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: FMVSCSLREAKTGSSLVRTVAIL*ESQKRT Trigger: AGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGT...CCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAACAAGCTCTGTGCTCTGGCTCCCTAATTCAAACTTGTGGGGGTGGGGGTGTTTTTCCACTTGCTaGTCGAAGTTCCTGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KQTSSVLWLPNSNLWGWGCFSTC*SKFLEE Trigger: CTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACA...CCCCCACCCCCACAAGTTTGAATTAGGGAGCCAGAGCACAGAGCTTGTTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CAA 90 bp | CACCCTCCCAGACCGCATTTCCTCATGGCTGTGCTATCAGCTGTCTTGCTTATTTGTTTTTCCACTTGCTaGTCGAAGTTCCTGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HPPRPHFLMAVLSAVLLICFSTC*SKFLEE Trigger: CTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACA...AATAAGCAAGACAGCTGATAGCACAGCCATGAGGAAATGCGGTCTGGGAGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CAA 90 bp | TTCATGGTTTCCTGTTCGCTCCGAGAGGCAAAGACAGGAAGTTCCTTGGTTAGGAGAACCAGGGCTGGATaGCAATTAGTGTTGTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FMVSCSLREAKTGSSLVRRTRAG*QLVLSR Trigger: TCTAGACAACACTAATTGCAATCCAGCCCTGGTTCT...CCTAACCAAGGAACTTCCTGTCTTTGCCTCTCGGAGCGAACAGGAAACCATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCACTTGAACAAGCAAACAGCTGGTCTTCTAATGCACCTATTTAAAGCACTGCTGAGTAGCCTCTaGTCGGGAAGGAAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: WSHLNKQTAGLLMHLFKALLSSL*SGRKNQ Trigger: CTGGTTCTTCCTTCCCGACAAGAGGCTACTCAGCAG...TGCTTTAAATAGGTGCATTAGAAGACCAGCTGTTTGCTTGTTCAAGTGACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTGAGAGGTTTTCCTTTTaGTGCTTCTTTGAGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: TGSSLVRVMSQQVSDSQGERFSF*CFFESL Trigger: CAGAGACTCAAAGAAGCACAAAAAGGAAAACCTCTC...ACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| CDS-3UTR CAA 90 bp | TCACTCTATAGAACAGGCTGGCCTCAAACTCAGAAATCCGCCTTCCTCTGCCTCCACCTGTGTATAGAATaGTTCCAAAGTATCCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: SLYRTGWPQTQKSAFLCLHLCIE*FQSILQ Trigger: TTGAAGGATACTTTGGAACAATTCTATACACAGGTG...GAGGCAGAGGAAGGCGGATTTCTGAGTTTGAGGCCAGCCTGTTCTATAGAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
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| CDS-3UTR CAA 90 bp | GAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTTAGAGAGAGGTTTTCCTTTTaGTGCTTCTTTGAGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: EVPWLGSCHSKSVTVRVRERFSF*CFFESL Trigger: CAGAGACTCAAAGAAGCACAAAAAGGAAAACCTCTC...TCTAACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| CDS TCA 90 bp | GTTCCAAAGTATCCTTCAAAGAGAAACATGACAGAACCAGGGCAGTaGTTGGCATCTATGAGCGTTACAGTCATGGTTTCTTGCCCAATT | + |
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Preference number: 5 (lower is better) Translates to: VPKYPSKRNMTEPGQ*LASMSVTVMVSCPI Trigger: AATTGGGCAAGAAACCATGACTGTAACGCTCATAGATGCCAATCACTGCCCTGGTTCTGTCATGTTTCTCTTTGAAGGATACTTTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000198752.2 |
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| CDS TCA 90 bp | AGAACCAGGGCTGGATTGCAATTAGTGTTGTCTAGATACAAAGTATaGATCTGTTTCCCCAGTATCAGAGCAGGTTCCTTCAGCATGGAT | + |
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Preference number: 5 (lower is better) Translates to: RTRAGLQLVLSRYKV*ICFPSIRAGSFSMD Trigger: ATCCATGCTGAAGGAACCTGCTCTGATACTGGGGAAACAGATTCATACTTTGTATCTAGACAACACTAATTGCAATCCAGCCCTGGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000198752.2 |
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| CDS-3UTR CAA 90 bp | GAAGTTCCTTGGTTAGGGTCATGTCACAGCAAGTCAGTGACAGTCAGGGTTAGACACCTGTGTATAGAATaGTTCCAAAGTATCCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: EVPWLGSCHSKSVTVRVRHLCIE*FQSILQ Trigger: TTGAAGGATACTTTGGAACAATTCTATACACAGGTG...TCTAACCCTGACTGTCACTGACTTGCTGTGACATGACCCTAACCAAGGAACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
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| CDS-3UTR CAA 90 bp | GTACTCTCTGGTGTTTTTCCACTTGCTTGTCGAAGTTCCTGGAAGAGAAGCCTGCACCTGTGTATAGAATaGTTCCAAAGTATCCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: VLSGVFPLACRSSWKRSLHLCIE*FQSILQ Trigger: TTGAAGGATACTTTGGAACAATTCTATACACAGGTG...CAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACACCAGAGAGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198752.2 |
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| CDS-3UTR CAA 90 bp | TGTCTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTACAGTCGCCATCTTGTaGGAGTCACAAAAGAGGACT | + |
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Preference number: 5 (lower is better) Translates to: CLMTVTKPLHEEGRCYFPTVAIL*ESQKRT Trigger: AGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGT...AGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| CDS-3UTR CAA 90 bp | TGTCTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTTGTTTTTCCACTTGCTaGTCGAAGTTCCTGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: CLMTVTKPLHEEGRCYFPCFSTC*SKFLEE Trigger: CTCTTCCAGGAACTTCGACAAGCAAGTGGAAAAACA...AGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| CDS-3UTR CAA 90 bp | AGTCCAATTTTTATGTTGTGTTGTGGGAACTGTCGGATTAGCTGGACAATCTGCCACCTGTGTATAGAATaGTTCCAAAGTATCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SPIFMLCCGNCRISWTICHLCIE*FQSILQ Trigger: CTGCAGGATACTTTGGAACAATTCTATACACAGGTG...GCAGATTGTCCAGCTAATCCGACAGTTCCCACAACACAACATAAAAATTGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128716.2 |
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| CDS-3UTR CAA 90 bp | TGTCTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTGAGAGGTTTTCCTTTTaGTGCTTCTTTGAGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: CLMTVTKPLHEEGRCYFPERFSF*CFFESL Trigger: CAGAGACTCAAAGAAGCACAAAAAGGAAAACCTCTC...AGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106834.8 |
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| CDS CCA 90 bp | AAGTATGAATCTGTTTCCCCAGTATCAGAGCAGGTTCCTTCAGCATaGATGGTGTATATCGAAAATCACCTGTGTATAGAATTGTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: KYESVSPVSEQVPSA*MVYIENHLCIELFQ Trigger: TTGGAACAATTCTATACACAGGTGATTTTCGATATACACCATCCATGCTGAAGGAACCTGCTCTGATACTGGGGAAACAGATTCATACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000198752.2 |
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| CDS-3UTR CAA 90 bp | CTCATGACAGTTACGAAACCCCTTCATGAAGAAGGAAGGTGTTATTTTCCTAACCACCTGTGTATAGAATaGTTCCAAAGTATCCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: LMTVTKPLHEEGRCYFPNHLCIE*FQSILQ Trigger: TTGAAGGATACTTTGGAACAATTCTATACACAGGTG...GTTAGGAAAATAACACCTTCCTTCTTCATGAAGGGGTTTCGTAACTGTCATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029435.15 ENSMUST00000106834.8 |
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| CDS-3UTR CAA 90 bp | GTTTACATTTGTGTGTTGCGGGATATAGCAGCAGAGGCATATTTAAAATGTACAGCAAGGCACAAAGATTaGGAAAACAATGAGGACCTT | + |
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Preference number: 5 (lower is better) Translates to: VYICVLRDIAAEAYLKCTARHKD*ENNEDL Trigger: AAGGTCCTCATTGTTTTCCAAATCTTTGTGCCTTGC...TGTACATTTTAAATATGCCTCTGCTGCTATATCCCGCAACACACAAATGTAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
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| CDS CCA 72 bp | GTGCTAGACAAACCCACCGTGTGGTCACAGTGCATGTaGGTTAAGAAGAAGAGCCGCGCCGAACCGGCACGG | + |
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Preference number: 6 (lower is better) Translates to: VLDKPTVWSQCM*VKKKSRAEPAR Trigger: CCGTGCCGGTTCGGCGCGGCTCTTCTTCTTAACCCACATGCACTGTGACCACACGGTGGGTTTGTCTAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000128716.2 |
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| CDS CCA 72 bp | AGGGGCCGGGCCCAAGTGCTAGACAAACCCACCGTGTaGTCACAGTGCATGTGGGTTAAGAAGAAGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RGRAQVLDKPTV*SQCMWVKKKSR Trigger: GCGGCTCTTCTTCTTAACCCACATGCACTGTGACCACACGGTGGGTTTGTCTAGCACTTGGGCCCGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000128716.2 |
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| CDS GCA 72 bp | GCCCAAGTGCTAGACAAACCCACCGTGTGGTCACAGTaGATGTGGGTTAAGAAGAAGAGCCGCGCCGAACCG | + |
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Preference number: 6 (lower is better) Translates to: AQVLDKPTVWSQ*MWVKKKSRAEP Trigger: CGGTTCGGCGCGGCTCTTCTTCTTAACCCACATGCACTGTGACCACACGGTGGGTTTGTCTAGCACTTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000128716.2 |
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| CDS TCA 72 bp | ATGGTTTCTTGCCCAATTTCATCTAGAGGTAATACATaGCTCTCGCCAACCTCCAGGGCCCGGATCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: MVSCPISSRGNT*LSPTSRARIQC Trigger: GCACTGGATCCGGGCCCTGGAGGTTGGCGAGAGTCATGTATTACCTCTAGATGAAATTGGGCAAGAAACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 |
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| CDS TCA 72 bp | TATCCTTCAAAGAGAAACATGACAGAACCAGGGCAGTaGTTGGCATCTATGAGCGTTACAGTCATGGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: YPSKRNMTEPGQ*LASMSVTVMVS Trigger: AGAAACCATGACTGTAACGCTCATAGATGCCAATCACTGCCCTGGTTCTGTCATGTTTCTCTTTGAAGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029435.15 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000198752.2 |
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| CDS CAA 72 bp | TGGAAGAAAAAGGGAAACCGCTCACCAATTTTTATGTaGTGTTGTGGGAACTGTCGGATTAGCTGGACAATC | + |
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Preference number: 6 (lower is better) Translates to: WKKKGNRSPIFM*CCGNCRISWTI Trigger: GATTGTCCAGCTAATCCGACAGTTCCCACAACACAACATAAAAATTGGTGAGCGGTTTCCCTTTTTCTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
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| CDS TCA 72 bp | GCTGGATTGCAATTAGTGTTGTCTAGATACAAAGTATaGATCTGTTTCCCCAGTATCAGAGCAGGTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: AGLQLVLSRYKV*ICFPSIRAGSF Trigger: GAAGGAACCTGCTCTGATACTGGGGAAACAGATTCATACTTTGTATCTAGACAACACTAATTGCAATCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029435.15 ENSMUST00000063502.13 ENSMUST00000106832.2 ENSMUST00000106834.8 ENSMUST00000198752.2 |
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| CDS TCA 72 bp | AGAAAGGTGAGCAAGGCACAAAGATTTGGAAAACAATaGGGACCTTCAAAGAATTTTGATTCACTAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: RKVSKAQRFGKQ*GPSKNFDSLSM Trigger: CATGCTTAGTGAATCAAAATTCTTTGAAGGTCCTCATTGTTTTCCAAATCTTTGTGCCTTGCTCACCTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106832.2 |
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