Pregenerated sensors for DCLRE1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025077Ensembl transcript IDs: ENSMUST00000182059.3, ENSMUST00000182276.2, ENSMUST00000182276.3, ENSMUST00000183143.8, ENSMUST00000183143.9
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTCTGGGCTGCAGTATGTGGTATCCAGGAACAGTGTGTGGACTTTaGGGCCCGCCAGGCGAGAGCGTTCCATGCTGGGGTCCGCTCGGA | + |
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Preference number: 1 (lower is better) Translates to: ILGCSMWYPGTVCGL*GPPGESVPCWGPLG Trigger: TCCGAGCGGACCCCAGCATGGAACGCTCTCGCCTGGCGGGCCGCAAAGTCCACACACTGTTCCTGGATACCACATACTGCAGCCCAGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR GCA 90 bp | AGGCGAGAGCGTTCCATGCTGGGGTCCGCTCGGAAGTCTCCGGTGTaGAGTATGACAGCACCGTTGGGAAGCTGGAAAAGGATCATGGTA | + |
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Preference number: 1 (lower is better) Translates to: RRERSMLGSARKSPV*SMTAPLGSWKRIMV Trigger: TACCATGATCCTTTTCCAGCTTCCCAACGGTGCTGTCATACTGCACACCGGAGACTTCCGAGCGGACCCCAGCATGGAACGCTCTCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CCA 90 bp | AAGGTATATTCTGGGCTGCAGTATGTGGTATCCAGGAACAGTGTGTaGACTTTGCGGCCCGCCAGGCGAGAGCGTTCCATGCTGGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: KVYSGLQYVVSRNSV*TLRPARRERSMLGS Trigger: GGACCCCAGCATGGAACGCTCTCGCCTGGCGGGCCGCAAAGTCCACACACTGTTCCTGGATACCACATACTGCAGCCCAGAATATACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CCA 90 bp | CTCAGAGAGCTCTGGGCTTTCCTCTTGCACAACCGGGGCCTCTTTTaGTTGGGACTCACAACTGGACTGACATTGGGCCCTTCTGATGCG | + |
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Preference number: 1 (lower is better) Translates to: LRELWAFLLHNRGLF*LGLTTGLTLGPSDA Trigger: CGCATCAGAAGGGCCCAATGTCAGTCCAGTTGTGAGTCCCAACCAAAAGAGGCCCCGGTTGTGCAAGAGGAAAGCCCAGAGCTCTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR GCA 90 bp | ACTTCCCCTGCACCAGAGGACTCTGAAATGTTCATGTTCCCTCTCTaGGTCCTGCCACGAGTCCGTCTCACGAAGGCTTTGCCTTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: TSPAPEDSEMFMFPL*VLPRVRLTKALPLL Trigger: CAGCAAAGGCAAAGCCTTCGTGAGACGGACTCGTGGCAGGACGCAGAGAGGGAACATGAACATTTCAGAGTCCTCTGGTGCAGGGGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | GCACCGTTGGGAAGCTGGAAAAGGATCATGGTAGCACCTGGACAGTaGTTGGCATCCAGCAAAACCACCTTGACGCTGTCCACGACACAC | + |
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Preference number: 1 (lower is better) Translates to: APLGSWKRIMVAPGQ*LASSKTTLTLSTTH Trigger: GTGTGTCGTGGACAGCGTCAAGGTGGTTTTGCTGGATGCCAATCACTGTCCAGGTGCTACCATGATCCTTTTCCAGCTTCCCAACGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | GCCCTGACCATCCTTCCTGGAACTCGTTGTAGATCAGGCTGGCCTTaGACTCTCACCTGCTTCTGCCTCCCAAGTGCTGGGATTAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: ALTILPGTRCRSGWP*TLTCFCLPSAGIKG Trigger: ACCTTTAATCCCAGCACTTGGGAGGCAGAAGCAGGTGAGAGTTCAAGGCCAGCCTGATCTACAACGAGTTCCAGGAAGGATGGTCAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | CCTTTGCTGAGGATGACTGGTCCCAACTCTGGGTTGTTCATGAGGTaGCCTGACCTTCTCTGGCATGGTCCTTCCCGTGGTGAATTTGAC | + |
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Preference number: 1 (lower is better) Translates to: PLLRMTGPNSGLFMR*PDLLWHGPSRGEFD Trigger: GTCAAATTCACCACGGGAAGGACCATGCCAGAGAAGGTCAGGTCACCTCATGAACAACCCAGAGTTGGGACCAGTCATCCTCAGCAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | ATAGAACGGACATGTTCTTCTCACTTCCCCTGCACCAGAGGACTCTaGAATGTTCATGTTCCCTCTCTGCGTCCTGCCACGAGTCCGTCT | + |
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Preference number: 1 (lower is better) Translates to: IERTCSSHFPCTRGL*NVHVPSLRPATSPS Trigger: AGACGGACTCGTGGCAGGACGCAGAGAGGGAACATGAACATTTCAGAGTCCTCTGGTGCAGGGGAAGTGAGAAGAACATGTCCGTTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | ACCACCTTGACGCTGTCCACGACACACTCGGTGTCCATCGGCAACTaGCGGATGTATTGCTCTTGCACTCGAAGCTTCTTCTTCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: TTLTLSTTHSVSIGN*RMYCSCTRSFFFNR Trigger: TCTGTTGAAGAAGAAGCTTCGAGTGCAAGAGCAATACATCCGTCAGTTGCCGATGGACACCGAGTGTGTCGTGGACAGCGTCAAGGTGGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CCA 90 bp | TGTTCAAAGCGAGGGAGGAGCGCAGTCCTGAGGCTGTTCTTCTCATaGCCCGTACCTCACATCAATTTAGATTTCATTATCGCCGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: CSKRGRSAVLRLFFS*PVPHINLDFIIAAC Trigger: GCAGGCGGCGATAATGAAATCTAAATTGATGTGAGGTACGGGCCATGAGAAGAACAGCCTCAGGACTGCGCTCCTCCCTCGCTTTGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182276.2 ENSMUST00000183143.8 |
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| 3UTR CCA 90 bp | TATGACAGCACCGTTGGGAAGCTGGAAAAGGATCATGGTAGCACCTaGACAGTGATTGGCATCCAGCAAAACCACCTTGACGCTGTCCAC | + |
|
Preference number: 1 (lower is better) Translates to: YDSTVGKLEKDHGST*TVIGIQQNHLDAVH Trigger: GTGGACAGCGTCAAGGTGGTTTTGCTGGATGCCAATCACTGTCCAGGTGCTACCATGATCCTTTTCCAGCTTCCCAACGGTGCTGTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CCA 90 bp | CGTGGGTTTAGAGTTACAGCCTCAAAGGCAGTGTTGATGGCAAACTaGATAACCTCCTGCTGTGACGGGAAGGTATATTCTGGGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: RGFRVTASKAVLMAN*ITSCCDGKVYSGLQ Trigger: CTGCAGCCCAGAATATACCTTCCCGTCACAGCAGGAGGTTATCCAGTTTGCCATCAACACTGCCTTTGAGGCTGTAACTCTAAACCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | AGCCTCAAAGGCAGTGTTGATGGCAAACTGGATAACCTCCTGCTGTaGCGGGAAGGTATATTCTGGGCTGCAGTATGTGGTATCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SLKGSVDGKLDNLLL*REGIFWAAVCGIQE Trigger: TTCCTGGATACCACATACTGCAGCCCAGAATATACCTTCCCGTCACAGCAGGAGGTTATCCAGTTTGCCATCAACACTGCCTTTGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | GATTTCATTATCGCCGCCTGCTGTACGGAACTCAGCAGACGTCTGTaGCAGCATCAGTATCCGGCTTCCAGTCTCCACTCCTTAAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: DFIIAACCTELSRRL*QHQYPASSLHSLKY Trigger: ATACTTTAAGGAGTGGAGACTGGAAGCCGGATACTGATGCTGTCACAGACGTCTGCTGAGTTCCGTACAGCAGGCGGCGATAATGAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR GCA 90 bp | GTTACAGCCTCAAAGGCAGTGTTGATGGCAAACTGGATAACCTCCTaGTGTGACGGGAAGGTATATTCTGGGCTGCAGTATGTGGTATCC | + |
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Preference number: 1 (lower is better) Translates to: VTASKAVLMANWITS*CDGKVYSGLQYVVS Trigger: GGATACCACATACTGCAGCCCAGAATATACCTTCCCGTCACAGCAGGAGGTTATCCAGTTTGCCATCAACACTGCCTTTGAGGCTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR GCA 90 bp | CATCGGCAATGGCTAGGAAGACTTTCTCCTTTCCGATGCAGTAAGTaGCACAGACAACAAGGGCACGTGGGTTTAGAGTTACAGCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: HRQWLGRLSPFRCSK*HRQQGHVGLELQPQ Trigger: TTGAGGCTGTAACTCTAAACCCACGTGCCCTTGTTGTCTGTGGCACTTACTGCATCGGAAAGGAGAAAGTCTTCCTAGCCATTGCCGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | AGGGAACATGATGCAGGTAGGGAGGCATGGCGCTGGAGAAGTGGTTaGGAGTTCTGCAACCTTAAAATTAATTTGCATCATTGGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: REHDAGREAWRWRSG*EFCNLKINLHHWEE Trigger: CTCCTCCCAATGATGCAAATTAATTTTAAGGTTGCAGAACTCTCAACCACTTCTCCAGCGCCATGCCTCCCTACCTGCATCATGTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | ATGTTGTTAGAGTGTGTCCATCCTGTGGGTCGGAACGCCAAAATCTaGTCGTATTTCCCACCACACTTCTTCAAATGGCTCTGCAAACCC | + |
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Preference number: 1 (lower is better) Translates to: MLLECVHPVGRNAKI*SYFPPHFFKWLCKP Trigger: GGGTTTGCAGAGCCATTTGAAGAAGTGTGGTGGGAAATACGATCAGATTTTGGCGTTCCGACCCACAGGATGGACACACTCTAACAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR GCA 90 bp | AACCTAAAACATCGGCAATGGCTAGGAAGACTTTCTCCTTTCCGATaGAGTAAGTGCCACAGACAACAAGGGCACGTGGGTTTAGAGTTA | + |
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Preference number: 1 (lower is better) Translates to: NLKHRQWLGRLSPFR*SKCHRQQGHVGLEL Trigger: TAACTCTAAACCCACGTGCCCTTGTTGTCTGTGGCACTTACTGCATCGGAAAGGAGAAAGTCTTCCTAGCCATTGCCGATGTTTTAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CCA 90 bp | AAGCTTCTTCTTCAACAGATTGCCTGTTATCTCGCTGCAATAGACTaGCCTTGTGAAGTCCTTGGACAACCCGGCGTAATGATCAGAATG | + |
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Preference number: 1 (lower is better) Translates to: KLLLQQIACYLAAID*PCEVLGQPGVMIRM Trigger: CATTCTGATCATTACGCCGGGTTGTCCAAGGACTTCACAAGGCCAGTCTATTGCAGCGAGATAACAGGCAATCTGTTGAAGAAGAAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CCA 90 bp | CCACCACACTTCTTCAAATGGCTCTGCAAACCCTCAAACATGAACTaGACTCATCTCCATCTTCAGGACACTGTAAGCAGAAGTGATGTG | + |
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Preference number: 1 (lower is better) Translates to: PPHFFKWLCKPSNMN*THLHLQDTVSRSDV Trigger: CACATCACTTCTGCTTACAGTGTCCTGAAGATGGAGATGAGTCCAGTTCATGTTTGAGGGTTTGCAGAGCCATTTGAAGAAGTGTGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | TTTCTTCGATGTTGCCGCTTCTCTCCAGACAGTCCCACAGAGTGCTaGCTCTCATTTAAATTCTTTGCATCAAACTCTAAGTCACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: FLRCCRFSPDSPTEC*LSFKFFASNSKSLR Trigger: TCTGAGTGACTTAGAGTTTGATGCAAAGAATTTAAATGAGAGTCAGCACTCTGTGGGACTGTCTGGAGAGAAGCGGCAACATCGAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR TCA 90 bp | GAGAGTTCTGCAACCTTAAAATTAATTTGCATCATTGGGAGGAGGTaGACCAAAGAGTCGCACATGTCTGTGGTTATGAGGGAACTGACT | + |
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Preference number: 1 (lower is better) Translates to: ESSATLKLICIIGRR*TKESHMSVVMRELT Trigger: AGTCAGTTCCCTCATAACCACAGACATGTGCGACTCTTTGGTTCACCTCCTCCCAATGATGCAAATTAATTTTAAGGTTGCAGAACTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR GCA 90 bp | TCTGTGGCTTCAGCCACTGGACAAAACGCTTCATTTCTAAGTAGCTaGTGTGTTCACTGTAGGGAATCCCATATATCGATATATTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SVASATGQNASFLSS*CVHCRESHISIYFL Trigger: GAGGAAATATATCGATATATGGGATTCCCTACAGTGAACACAGCAGCTACTTAGAAATGAAGCGTTTTGTCCAGTGGCTGAAGCCACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR GCA 90 bp | ATGTCTGTGGTTATGAGGGAACTGACTTCTGGTATATTGAGGCACTaGAAAGTTTTATACTTTTCTTGGGACATGCCCACCTTTGAACCT | + |
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Preference number: 1 (lower is better) Translates to: MSVVMRELTSGILRH*KVLYFSWDMPTFEP Trigger: AGGTTCAAAGGTGGGCATGTCCCAAGAAAAGTATAAAACTTTGCAGTGCCTCAATATACCAGAAGTCAGTTCCCTCATAACCACAGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGCCAGGCGAGAGCGTTCCATGCTGGGGTCCGCTCGGAAGTCTCCGGTGTGCTTCATGTTCCCTCTCTaGGTCCTGCCACGAGTCCGT | + |
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Preference number: 2 (lower is better) Translates to: PARRERSMLGSARKSPVCFMFPL*VLPRVR Trigger: ACGGACTCGTGGCAGGACGCAGAGAGGGAACATGAA...GCACACCGGAGACTTCCGAGCGGACCCCAGCATGGAACGCTCTCGCCTGGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCGAGAGCGTTCCATGCTGGGGTCCGCTCGGAAGTCTCCGGTGTGCAGTATGGGAGGAGCGCAGTCCTaGGGCTGTTCTTCTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: RRERSMLGSARKSPVCSMGGAQS*GCSSHG Trigger: GCCATGAGAAGAACAGCCTCAGGACTGCGCTCCTCC...CATACTGCACACCGGAGACTTCCGAGCGGACCCCAGCATGGAACGCTCTCGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CAA 90 bp | TATTCTGGGCTGCAGTATGTGGTATCCAGGAACAGTGTGTGGACTTaGCGGCCCGCCAGGCGAGAGCGTTCCATGCTGGGGTCCGCTCGG | + |
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Preference number: 2 (lower is better) Translates to: YSGLQYVVSRNSVWT*RPARRERSMLGSAR Trigger: CCGAGCGGACCCCAGCATGGAACGCTCTCGCCTGGCGGGCCGCAAAGTCCACACACTGTTCCTGGATACCACATACTGCAGCCCAGAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CAA 90 bp | AGAGAGCTCTGGGCTTTCCTCTTGCACAACCGGGGCCTCTTTTGGTaGGGACTCACAACTGGACTGACATTGGGCCCTTCTGATGCGCTT | + |
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Preference number: 2 (lower is better) Translates to: RELWAFLLHNRGLFW*GLTTGLTLGPSDAL Trigger: AAGCGCATCAGAAGGGCCCAATGTCAGTCCAGTTGTGAGTCCCAACCAAAAGAGGCCCCGGTTGTGCAAGAGGAAAGCCCAGAGCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAACATGATGCAGGTAGGGAGGCATGGCGCTGGAGAAGTGGTTGAGAGTTCTGAAAAGCATCCACAGTaGAGCCAGTCCCGGGGATTC | + |
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Preference number: 2 (lower is better) Translates to: GNMMQVGRHGAGEVVESSEKHPQ*SQSRGF Trigger: GAATCCCCGGGACTGGCTTCACTGTGGATGCTTTTC...AGAACTCTCAACCACTTCTCCAGCGCCATGCCTCCCTACCTGCATCATGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR TCA 90 bp | GAACAGTGTGTGGACTTTGCGGCCCGCCAGGCGAGAGCGTTCCATGCTGGGGTCAGTCCCACAGAGTGCTaGCTCTCATTTAAATTCTTT | + |
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Preference number: 2 (lower is better) Translates to: EQCVDFAARQARAFHAGVSPTEC*LSFKFF Trigger: AAAGAATTTAAATGAGAGTCAGCACTCTGTGGGACT...GACCCCAGCATGGAACGCTCTCGCCTGGCGGGCCGCAAAGTCCACACACTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCATGGGGACGAGATTCAGAGTGAAAGGGACTGGGAAGAGCTCCTCTCAGTGTCACTCAGAGAGCTCTaGGCTTTCCTCTTGCACAAC | + |
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Preference number: 2 (lower is better) Translates to: THGDEIQSERDWEELLSVSLREL*AFLLHN Trigger: GTTGTGCAAGAGGAAAGCCCAGAGCTCTCTGAGTGA...CACTGAGAGGAGCTCTTCCCAGTCCCTTTCACTCTGAATCTCGTCCCCATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAACATGATGCAGGTAGGGAGGCATGGCGCTGGAGAAGTGGTTGAGAGTTCTCTCGCTGCAATAGACTaGCCTTGTGAAGTCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GNMMQVGRHGAGEVVESSLAAID*PCEVLG Trigger: TCCAAGGACTTCACAAGGCCAGTCTATTGCAGCGAG...AGAACTCTCAACCACTTCTCCAGCGCCATGCCTCCCTACCTGCATCATGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGTCCATTATCATCATGGCAGGGAACATGATGCAGGTAGGGAGGCATGGCGCGTGTTGATGGCAAACTaGATAACCTCCTGCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LVHYHHGREHDAGREAWRVLMAN*ITSCCD Trigger: GTCACAGCAGGAGGTTATCCAGTTTGCCATCAACAC...GCGCCATGCCTCCCTACCTGCATCATGTTCCCTGCCATGATGATAATGGACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CAA 90 bp | ACAACAAGGGCACGTGGGTTTAGAGTTACAGCCTCAAAGGCAGTGTaGATGGCAAACTGGATAACCTCCTGCTGTGACGGGAAGGTATAT | + |
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Preference number: 2 (lower is better) Translates to: TTRARGFRVTASKAV*MANWITSCCDGKVY Trigger: ATATACCTTCCCGTCACAGCAGGAGGTTATCCAGTTTGCCATCAACACTGCCTTTGAGGCTGTAACTCTAAACCCACGTGCCCTTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR CCA 90 bp | GCTACCATTTCAGAGCTTAGTCATGGTTCTATTGCTGTGAAGACACACCATGACAACCGGGGCCTCTTTTaGTTGGGACTCACAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: ATISELSHGSIAVKTHHDNRGLF*LGLTTG Trigger: TCCAGTTGTGAGTCCCAACCAAAAGAGGCCCCGGTT...GTCATGGTGTGTCTTCACAGCAATAGAACCATGACTAAGCTCTGAAATGGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTCGGAACGCCAAAATCTGATCGTATTTCCCACCACACTTCTTCAAATGGCTCTTTCTCCTTTCCGATaGAGTAAGTGCCACAGACAA | + |
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Preference number: 2 (lower is better) Translates to: GSERQNLIVFPTTLLQMALSPFR*SKCHRQ Trigger: TTGTCTGTGGCACTTACTGCATCGGAAAGGAGAAAG...AGCCATTTGAAGAAGTGTGGTGGGAAATACGATCAGATTTTGGCGTTCCGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATTTCAGAGCTTAGTCATGGTTCTATTGCTGTGAAGACACACCATGACCAACAGAGTGAAAGGGACTaGGAAGAGCTCCTCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: TISELSHGSIAVKTHHDQQSERD*EELLSV Trigger: CACTGAGAGGAGCTCTTCCCAGTCCCTTTCACTCTG...TTGGTCATGGTGTGTCTTCACAGCAATAGAACCATGACTAAGCTCTGAAATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CAA 90 bp | GAGTCGCACATGTCTGTGGTTATGAGGGAACTGACTTCTGGTATATaGAGGCACTGCAAAGTTTTATACTTTTCTTGGGACATGCCCACC | + |
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Preference number: 2 (lower is better) Translates to: ESHMSVVMRELTSGI*RHCKVLYFSWDMPT Trigger: GGTGGGCATGTCCCAAGAAAAGTATAAAACTTTGCAGTGCCTCAATATACCAGAAGTCAGTTCCCTCATAACCACAGACATGTGCGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR CAA 90 bp | TTAAAGTATTTCTCCATCGTGTTCCTAGACCGAAAGCTGCCGACATaGACAGTGGGGATGATTTTCTGTGGCTTCAGCCACTGGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: LKYFSIVFLDRKLPT*TVGMIFCGFSHWTK Trigger: TTTTGTCCAGTGGCTGAAGCCACAGAAAATCATCCCCACTGTCAATGTCGGCAGCTTTCGGTCTAGGAACACGATGGAGAAATACTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR CCA 90 bp | GCTACCATTTCAGAGCTTAGTCATGGTTCTATTGCTGTGAAGACACACCATGACTTTGCTGAGGATGACTaGTCCCAACTCTGGGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: ATISELSHGSIAVKTHHDFAEDD*SQLWVV Trigger: AACAACCCAGAGTTGGGACCAGTCATCCTCAGCAAA...GTCATGGTGTGTCTTCACAGCAATAGAACCATGACTAAGCTCTGAAATGGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR TCA 90 bp | ATATTGAGGCACTGCAAAGTTTTATACTTTTCTTGGGACATGCCCACCTTTGAAAATAGACTGGCCTTGTaGAGTCCTTGGACAACCCGG | + |
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Preference number: 2 (lower is better) Translates to: ILRHCKVLYFSWDMPTFENRLAL*SPWTTR Trigger: CCGGGTTGTCCAAGGACTTCACAAGGCCAGTCTATT...TTCAAAGGTGGGCATGTCCCAAGAAAAGTATAAAACTTTGCAGTGCCTCAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATCTTCAGGACACTGTAAGCAGAAGTGATGTGCTGTCTTACATTGTTTTTAGGCACCCAGCACCTTaGGTGTATCACTGTTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LHLQDTVSRSDVLSYIVFRHPAP*VYHCSK Trigger: CTTTGAACAGTGATACACCCAAGGTGCTGGGTGCCT...AAAAACAATGTAAGACAGCACATCACTTCTGCTTACAGTGTCCTGAAGATGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATCTTCAGGACACTGTAAGCAGAAGTGATGTGCTGTCTTACATTGTTTTTCTGGGCTGCAGTATGTaGTATCCAGGAACAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LHLQDTVSRSDVLSYIVFLGCSM*YPGTVC Trigger: ACACACTGTTCCTGGATACCACATACTGCAGCCCAG...AAAAACAATGTAAGACAGCACATCACTTCTGCTTACAGTGTCCTGAAGATGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCTTCAGGACACTGTAAGCAGAAGTGATGTGCTGTCTTACATTGTTTTTTGCACCAGAGGACTCTaGAATGTTCATGTTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LHLQDTVSRSDVLSYIVFCTRGL*NVHVPS Trigger: AGAGGGAACATGAACATTTCAGAGTCCTCTGGTGCA...AAAAACAATGTAAGACAGCACATCACTTCTGCTTACAGTGTCCTGAAGATGGAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
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| 3UTR GCA 72 bp | TGTGGACTTTGCGGCCCGCCAGGCGAGAGCGTTCCATaGTGGGGTCCGCTCGGAAGTCTCCGGTGTGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CGLCGPPGESVP*WGPLGSLRCAV Trigger: TACTGCACACCGGAGACTTCCGAGCGGACCCCAGCATGGAACGCTCTCGCCTGGCGGGCCGCAAAGTCCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR GCA 72 bp | CGTTCCATGCTGGGGTCCGCTCGGAAGTCTCCGGTGTaGAGTATGACAGCACCGTTGGGAAGCTGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RSMLGSARKSPV*SMTAPLGSWKR Trigger: CCTTTTCCAGCTTCCCAACGGTGCTGTCATACTGCACACCGGAGACTTCCGAGCGGACCCCAGCATGGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR GCA 72 bp | TGCAGTATGTGGTATCCAGGAACAGTGTGTGGACTTTaGGGCCCGCCAGGCGAGAGCGTTCCATGCTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CSMWYPGTVCGL*GPPGESVPCWG Trigger: ACCCCAGCATGGAACGCTCTCGCCTGGCGGGCCGCAAAGTCCACACACTGTTCCTGGATACCACATACTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGAGATTCAGAGTGAAAGGGACTGGGAAGAGCTCCTCTCAGTGGTCACTGGGGCTCTGGGCTTTCCTCTaGCACAACCGGGGCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TRFRVKGTGKSSSQWSLGLWAFL*HNRGLF Trigger: AAAGAGGCCCCGGTTGTGCAAGAGGAAAGCCCAGAG...CCCCAGTGACCACTGAGAGGAGCTCTTCCCAGTCCCTTTCACTCTGAATCTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | CACCTGGACAGTGATTGGCATCCAGCAAAACCACCTTaGCGCTGTCCACGACACACTCGGTGTCCATCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HLDSDWHPAKPP*RCPRHTRCPSA Trigger: TGCCGATGGACACCGAGTGTGTCGTGGACAGCGTCAAGGTGGTTTTGCTGGATGCCAATCACTGTCCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CCA 72 bp | CTCTGGGCTTTCCTCTTGCACAACCGGGGCCTCTTTTaGTTGGGACTCACAACTGGACTGACATTGGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWAFLLHNRGLF*LGLTTGLTLGP Trigger: AGGGCCCAATGTCAGTCCAGTTGTGAGTCCCAACCAAAAGAGGCCCCGGTTGTGCAAGAGGAAAGCCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | AGGATGACTGGTCCCAACTCTGGGTTGTTCATGAGGTaGCCTGACCTTCTCTGGCATGGTCCTTCCCGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RMTGPNSGLFMR*PDLLWHGPSRG Trigger: ACCACGGGAAGGACCATGCCAGAGAAGGTCAGGTCACCTCATGAACAACCCAGAGTTGGGACCAGTCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR GCA 72 bp | GCACCAGAGGACTCTGAAATGTTCATGTTCCCTCTCTaGGTCCTGCCACGAGTCCGTCTCACGAAGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: APEDSEMFMFPL*VLPRVRLTKAL Trigger: CAAAGCCTTCGTGAGACGGACTCGTGGCAGGACGCAGAGAGGGAACATGAACATTTCAGAGTCCTCTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | TGTATCACTGTTCAAAGCGAGGGAGGAGCGCAGTCCTaGGGCTGTTCTTCTCATGGCCCGTACCTCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: CITVQSEGGAQS*GCSSHGPYLTS Trigger: TGATGTGAGGTACGGGCCATGAGAAGAACAGCCTCAGGACTGCGCTCCTCCCTCGCTTTGAACAGTGATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182276.2 ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | CAGATGACCGTTAACCCATGGGGACGAGATTCAGAGTaGAAGGGACTGGGAAGAGCTCCTCTCAGTGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QMTVNPWGRDSE*KGLGRAPLSGH Trigger: GTGACCACTGAGAGGAGCTCTTCCCAGTCCCTTTCACTCTGAATCTCGTCCCCATGGGTTAACGGTCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182276.2 ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | ACGCTGTCCACGACACACTCGGTGTCCATCGGCAACTaGCGGATGTATTGCTCTTGCACTCGAAGCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TLSTTHSVSIGN*RMYCSCTRSFF Trigger: GAAGAAGCTTCGAGTGCAAGAGCAATACATCCGTCAGTTGCCGATGGACACCGAGTGTGTCGTGGACAGCGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCATGGGGACGAGATTCAGAGTGAAAGGGACTGGGAAGAGCTCCTCTCAGTGAAGGCACCCAGCACCTaGGGTGTATCACTGTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: THGDEIQSERDWEELLSVKAPST*GVSLFK Trigger: TTTGAACAGTGATACACCCAAGGTGCTGGGTGCCTT...CACTGAGAGGAGCTCTTCCCAGTCCCTTTCACTCTGAATCTCGTCCCCATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182276.2 ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | ACATGTTCTTCTCACTTCCCCTGCACCAGAGGACTCTaGAATGTTCATGTTCCCTCTCTGCGTCCTGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: TCSSHFPCTRGL*NVHVPSLRPAT Trigger: CGTGGCAGGACGCAGAGAGGGAACATGAACATTTCAGAGTCCTCTGGTGCAGGGGAAGTGAGAAGAACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | TGGACAACCCGGCGTAATGATCAGAATGGAAATGTGTaGGGAAGTAGGCGGTGCAGCCTTCGATCTCACCGT | + |
|
Preference number: 3 (lower is better) Translates to: WTTRRNDQNGNV*GSRRCSLRSHR Trigger: ACGGTGAGATCGAAGGCTGCACCGCCTACTTCCTCACACATTTCCATTCTGATCATTACGCCGGGTTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | GGAAGCTGGAAAAGGATCATGGTAGCACCTGGACAGTaGTTGGCATCCAGCAAAACCACCTTGACGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSWKRIMVAPGQ*LASSKTTLTLS Trigger: GGACAGCGTCAAGGTGGTTTTGCTGGATGCCAATCACTGTCCAGGTGCTACCATGATCCTTTTCCAGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR GCA 72 bp | ACTCTAAGTCACTCAGAGAGCTCTGGGCTTTCCTCTTaGACAACCGGGGCCTCTTTTGGTTGGGACTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: TLSHSESSGLSS*TTGASFGWDSQ Trigger: TTGTGAGTCCCAACCAAAAGAGGCCCCGGTTGTGCAAGAGGAAAGCCCAGAGCTCTCTGAGTGACTTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR GCA 72 bp | CATCGGCAATGGCTAGGAAGACTTTCTCCTTTCCGATaGAGTAAGTGCCACAGACAACAAGGGCACGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HRQWLGRLSPFR*SKCHRQQGHVG Trigger: ACCCACGTGCCCTTGTTGTCTGTGGCACTTACTGCATCGGAAAGGAGAAAGTCTTCCTAGCCATTGCCGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGGAGGTGAACCAAAGAGTCGCACATGTCTGTGGTTATGAGGGAACTGACCGTCTCACGAAGGCTTaGCCTTTGCTGAGGATGACT | + |
|
Preference number: 3 (lower is better) Translates to: WEEVNQRVAHVCGYEGTDRLTKA*PLLRMT Trigger: AGTCATCCTCAGCAAAGGCAAAGCCTTCGTGAGACG...GTCAGTTCCCTCATAACCACAGACATGTGCGACTCTTTGGTTCACCTCCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | GGCAGTGTTGATGGCAAACTGGATAACCTCCTGCTGTaGCGGGAAGGTATATTCTGGGCTGCAGTATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GSVDGKLDNLLL*REGIFWAAVCG Trigger: ACCACATACTGCAGCCCAGAATATACCTTCCCGTCACAGCAGGAGGTTATCCAGTTTGCCATCAACACTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CCA 72 bp | ACCGTTGGGAAGCTGGAAAAGGATCATGGTAGCACCTaGACAGTGATTGGCATCCAGCAAAACCACCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TVGKLEKDHGST*TVIGIQQNHLD Trigger: GTCAAGGTGGTTTTGCTGGATGCCAATCACTGTCCAGGTGCTACCATGATCCTTTTCCAGCTTCCCAACGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTCCATTATCATCATGGCAGGGAACATGATGCAGGTAGGGAGGCATGGCGCACGGATGTATTGCTCTaGCACTCGAAGCTTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVHYHHGREHDAGREAWRTDVLL*HSKLLL Trigger: AAGAAGAAGCTTCGAGTGCAAGAGCAATACATCCGT...GCGCCATGCCTCCCTACCTGCATCATGTTCCCTGCCATGATGATAATGGACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | GAGTGTGTCCATCCTGTGGGTCGGAACGCCAAAATCTaGTCGTATTTCCCACCACACTTCTTCAAATGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ECVHPVGRNAKI*SYFPPHFFKWL Trigger: GAGCCATTTGAAGAAGTGTGGTGGGAAATACGATCAGATTTTGGCGTTCCGACCCACAGGATGGACACACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CCA 72 bp | CGAGGGAGGAGCGCAGTCCTGAGGCTGTTCTTCTCATaGCCCGTACCTCACATCAATTTAGATTTCATTATC | + |
|
Preference number: 3 (lower is better) Translates to: RGRSAVLRLFFS*PVPHINLDFII Trigger: GATAATGAAATCTAAATTGATGTGAGGTACGGGCCATGAGAAGAACAGCCTCAGGACTGCGCTCCTCCCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182276.2 ENSMUST00000183143.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCGGAACGCCAAAATCTGATCGTATTTCCCACCACACTTCTTCAAATGGCTGCCTCAAAGGCAGTGTaGATGGCAAACTGGATAACC | + |
|
Preference number: 3 (lower is better) Translates to: GSERQNLIVFPTTLLQMAASKAV*MANWIT Trigger: GGTTATCCAGTTTGCCATCAACACTGCCTTTGAGGC...AGCCATTTGAAGAAGTGTGGTGGGAAATACGATCAGATTTTGGCGTTCCGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR GCA 72 bp | TCAAAGGCAGTGTTGATGGCAAACTGGATAACCTCCTaGTGTGACGGGAAGGTATATTCTGGGCTGCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SKAVLMANWITS*CDGKVYSGLQY Trigger: ATACTGCAGCCCAGAATATACCTTCCCGTCACAGCAGGAGGTTATCCAGTTTGCCATCAACACTGCCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR GCA 72 bp | TGGCTAGGAAGACTTTCTCCTTTCCGATGCAGTAAGTaGCACAGACAACAAGGGCACGTGGGTTTAGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: WLGRLSPFRCSK*HRQQGHVGLEL Trigger: TAACTCTAAACCCACGTGCCCTTGTTGTCTGTGGCACTTACTGCATCGGAAAGGAGAAAGTCTTCCTAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGAACCTAAAACATCGGCAATGGCTAGGAAGACTTTCTCCTTTCCGATGCAAGGCACCCAGCACCTaGGGTGTATCACTGTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PLNLKHRQWLGRLSPFRCKAPST*GVSLFK Trigger: TTTGAACAGTGATACACCCAAGGTGCTGGGTGCCTT...GCATCGGAAAGGAGAAAGTCTTCCTAGCCATTGCCGATGTTTTAGGTTCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CCA 72 bp | AGAGTTACAGCCTCAAAGGCAGTGTTGATGGCAAACTaGATAACCTCCTGCTGTGACGGGAAGGTATATTCT | + |
|
Preference number: 3 (lower is better) Translates to: RVTASKAVLMAN*ITSCCDGKVYS Trigger: AGAATATACCTTCCCGTCACAGCAGGAGGTTATCCAGTTTGCCATCAACACTGCCTTTGAGGCTGTAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | GATGCAGGTAGGGAGGCATGGCGCTGGAGAAGTGGTTaGGAGTTCTGCAACCTTAAAATTAATTTGCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: DAGREAWRWRSG*EFCNLKINLHH Trigger: ATGATGCAAATTAATTTTAAGGTTGCAGAACTCTCAACCACTTCTCCAGCGCCATGCCTCCCTACCTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | GCAACCTTAAAATTAATTTGCATCATTGGGAGGAGGTaGACCAAAGAGTCGCACATGTCTGTGGTTATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ATLKLICIIGRR*TKESHMSVVMR Trigger: CCTCATAACCACAGACATGTGCGACTCTTTGGTTCACCTCCTCCCAATGATGCAAATTAATTTTAAGGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR TCA 72 bp | CTACCATTTCAGAGCTTAGTCATGGTTCTATTGCTGTaGAGACACACCATGACCAAGGCAACTCTTATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPFQSLVMVLLL*RHTMTKATLIK Trigger: CTTTATAAGAGTTGCCTTGGTCATGGTGTGTCTTCACAGCAATAGAACCATGACTAAGCTCTGAAATGGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CCA 72 bp | ATAAAAGGTTTGTTTCATTACTACATAGATAATGCTTaGTGTCTGGTCTCCATGGTTGCCGCAGATGACCGT | + |
|
Preference number: 3 (lower is better) Translates to: IKGLFHYYIDNA*CLVSMVAADDR Trigger: ACGGTCATCTGCGGCAACCATGGAGACCAGACACCAAGCATTATCTATGTAGTAATGAAACAAACCTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182276.2 ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | CTGCAGTATGTGGTATCCAGGAACAGTGTGTGGACTTaGCGGCCCGCCAGGCGAGAGCGTTCCATGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQYVVSRNSVWT*RPARRERSMLG Trigger: CCCCAGCATGGAACGCTCTCGCCTGGCGGGCCGCAAAGTCCACACACTGTTCCTGGATACCACATACTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | CTCTGCGTCCTGCCACGAGTCCGTCTCACGAAGGCTTaGCCTTTGCTGAGGATGACTGGTCCCAACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCVLPRVRLTKA*PLLRMTGPNSG Trigger: CCCAGAGTTGGGACCAGTCATCCTCAGCAAAGGCAAAGCCTTCGTGAGACGGACTCGTGGCAGGACGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | GCTCTGGGCTTTCCTCTTGCACAACCGGGGCCTCTTTaGGTTGGGACTCACAACTGGACTGACATTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALGFPLAQPGPL*VGTHNWTDIGP Trigger: GGGCCCAATGTCAGTCCAGTTGTGAGTCCCAACCAAAAGAGGCCCCGGTTGTGCAAGAGGAAAGCCCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | GCTCGGAAGTCTCCGGTGTGCAGTATGACAGCACCGTaGGGAAGCTGGAAAAGGATCATGGTAGCACCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARKSPVCSMTAP*GSWKRIMVAPG Trigger: TCCAGGTGCTACCATGATCCTTTTCCAGCTTCCCAACGGTGCTGTCATACTGCACACCGGAGACTTCCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | AACTCTAAGTCACTCAGAGAGCTCTGGGCTTTCCTCTaGCACAACCGGGGCCTCTTTTGGTTGGGACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NSKSLRELWAFL*HNRGLFWLGLT Trigger: TGTGAGTCCCAACCAAAAGAGGCCCCGGTTGTGCAAGAGGAAAGCCCAGAGCTCTCTGAGTGACTTAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | GCACGTGGGTTTAGAGTTACAGCCTCAAAGGCAGTGTaGATGGCAAACTGGATAACCTCCTGCTGTGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARGFRVTASKAV*MANWITSCCDG Trigger: CCCGTCACAGCAGGAGGTTATCCAGTTTGCCATCAACACTGCCTTTGAGGCTGTAACTCTAAACCCACGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | CTCGGTGTCCATCGGCAACTGACGGATGTATTGCTCTaGCACTCGAAGCTTCTTCTTCAACAGATTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGVHRQLTDVLL*HSKLLLQQIAC Trigger: ACAGGCAATCTGTTGAAGAAGAAGCTTCGAGTGCAAGAGCAATACATCCGTCAGTTGCCGATGGACACCGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | CTTGTCTGGGGAATAATATCCGCTGTGCTAGTTATGTaGTTAGAGTGTGTCCATCCTGTGGGTCGGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVWGIISAVLVM*LECVHPVGRNA Trigger: GGCGTTCCGACCCACAGGATGGACACACTCTAACAACATAACTAGCACAGCGGATATTATTCCCCAGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | GACACACTCGGTGTCCATCGGCAACTGACGGATGTATaGCTCTTGCACTCGAAGCTTCTTCTTCAACAGATT | + |
|
Preference number: 4 (lower is better) Translates to: DTLGVHRQLTDV*LLHSKLLLQQI Trigger: AATCTGTTGAAGAAGAAGCTTCGAGTGCAAGAGCAATACATCCGTCAGTTGCCGATGGACACCGAGTGTGTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| 3UTR CAA 72 bp | ATGTCTGTGGTTATGAGGGAACTGACTTCTGGTATATaGAGGCACTGCAAAGTTTTATACTTTTCTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MSVVMRELTSGI*RHCKVLYFSWD Trigger: GTCCCAAGAAAAGTATAAAACTTTGCAGTGCCTCAATATACCAGAAGTCAGTTCCCTCATAACCACAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183143.8 |
||
| CDS GCA 90 bp | GTTACAAGGAGAACCTGGCGCTGCTGCAGCAAACAGCCCAGCCAATaGATCCGAGGGGCTGCCCAGAGGCTCCTTGCTATCTCGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTRRTWRCCSKQPSQ*IRGAAQRLLAISTL Trigger: CAAAGTCGAGATAGCAAGGAGCCTCTGGGCAGCCCCTCGGATGCATTGGCTGGGCTGTTTGCTGCAGCAGCGCCAGGTTCTCCTTGTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
||
| CDS GCA 90 bp | CATAGAGCGTCTTTCCTCAAGGTTACAAGGAGAACCTGGCGCTGCTaGAGCAAACAGCCCAGCCAATGCATCCGAGGGGCTGCCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HRASFLKVTRRTWRC*SKQPSQCIRGAAQR Trigger: CCTCTGGGCAGCCCCTCGGATGCATTGGCTGGGCTGTTTGCTGCAGCAGCGCCAGGTTCTCCTTGTAACCTTGAGGAAAGACGCTCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
||
| CDS TCA 90 bp | TTAGCCCCTGGAGCACCCAAGCCCTTGCGCGGTGATCCTCTGGTCTaGCTTTGGGTTGGATGCAAAGGCAGACACTTGCCTCCCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAPGAPKPLRGDPLV*LWVGCKGRHLPPSF Trigger: AAAGGAGGGAGGCAAGTGTCTGCCTTTGCATCCAACCCAAAGTCAGACCAGAGGATCACCGCGCAAGGGCTTGGGTGCTCCAGGGGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
||
| CDS TCA 90 bp | CAACCTCAGCAAGAGGCGATCCACCTCCCACCAGCTGGTCTCTCTTaGCGAACTCTGCACACTGTGGAACTGGCGATGTTTGAGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: QPQQEAIHLPPAGLS*RTLHTVELAMFENM Trigger: CATGTTCTCAAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTGGGAGGTGGATCGCCTCTTGCTGAGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
||
| CDS GCA 90 bp | AAGAGGCGATCCACCTCCCACCAGCTGGTCTCTCTTGACGAACTCTaGACACTGTGGAACTGGCGATGTTTGAGAACATGGGGAAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KRRSTSHQLVSLDEL*TLWNWRCLRTWGRD Trigger: GTCTCTTCCCCATGTTCTCAAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTGGGAGGTGGATCGCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
||
| CDS CCA 90 bp | TTTCAGAGTCATAGAGCGTCTTTCCTCAAGGTTACAAGGAGAACCTaGCGCTGCTGCAGCAAACAGCCCAGCCAATGCATCCGAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FQSHRASFLKVTRRT*RCCSKQPSQCIRGA Trigger: AGCCCCTCGGATGCATTGGCTGGGCTGTTTGCTGCAGCAGCGCCAGGTTCTCCTTGTAACCTTGAGGAAAGACGCTCTATGACTCTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
||
| CDS TCA 90 bp | ATAGGTGGAGAATCCAAACACTCAAACACATGCCACTGGGGCGTCTaGCCCAGCAATGAGGAGAAGGGCATCTGGCAGCTTGGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: IGGESKHSNTCHWGV*PSNEEKGIWQLGQY Trigger: ATACTGCCCAAGCTGCCAGATGCCCTTCTCCTCATTGCTGGGTCAGACGCCCCAGTGGCATGTGTTTGAGTGTTTGGATTCTCCACCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
||
| CDS GCA 90 bp | CAAACAGCCCAGCCAATGCATCCGAGGGGCTGCCCAGAGGCTCCTTaGTATCTCGACTTTGAGCGAGCAGGATGTGAGTGTATTTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: QTAQPMHPRGCPEAP*YLDFERAGCECISY Trigger: ATAAGAAATACACTCACATCCTGCTCGCTCAAAGTCGAGATAGCAAGGAGCCTCTGGGCAGCCCCTCGGATGCATTGGCTGGGCTGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS TCA 90 bp | ATCCAAACACTCAAACACATGCCACTGGGGCGTCTGACCCAGCAATaGGGAGAAGGGCATCTGGCAGCTTGGGCAGTATCCATCATAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IQTLKHMPLGRLTQQ*GEGHLAAWAVSIIN Trigger: GTTTATGATGGATACTGCCCAAGCTGCCAGATGCCCTTCTCCTCATTGCTGGGTCAGACGCCCCAGTGGCATGTGTTTGAGTGTTTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS CCA 90 bp | CTGTGTGTGGTAGGTCTTCTTGGGAAAGCCTGTGTCAGAGATAGGTaGAGAATCCAAACACTCAAACACATGCCACTGGGGCGTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LCVVGLLGKACVRDR*RIQTLKHMPLGRLT Trigger: GGTCAGACGCCCCAGTGGCATGTGTTTGAGTGTTTGGATTCTCCACCTATCTCTGACACAGGCTTTCCCAAGAAGACCTACCACACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183143.9 |
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| CDS CCA 90 bp | TCCACCTCCCACCAGCTGGTCTCTCTTGACGAACTCTGCACACTGTaGAACTGGCGATGTTTGAGAACATGGGGAAGAGACATTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STSHQLVSLDELCTL*NWRCLRTWGRDILP Trigger: AGGAAGAATGTCTCTTCCCCATGTTCTCAAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTGGGAGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CCA 90 bp | GTGTCATTTTCTGGCAATGGCAAACCCATACTCCCTGACTTGCTTTaGCTGTTTAATGCAACCTCAGCAAGAGGCGATCCACCTCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VSFSGNGKPILPDLL*LFNATSARGDPPPT Trigger: GGTGGGAGGTGGATCGCCTCTTGCTGAGGTTGCATTAAACAGCCAAAGCAAGTCAGGGAGTATGGGTTTGCCATTGCCAGAAAATGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CCA 90 bp | AAAAACACGCCTATATCCATTTGCTTCATTACTTTCTTAGACGGTTaGCTCGGGCTGCACTTGGGACTGGAAGGCGATGTGCCCAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KNTPISICFITFLDG*LGLHLGLEGDVPKG Trigger: GCCCTTGGGCACATCGCCTTCCAGTCCCAAGTGCAGCCCGAGCCAACCGTCTAAGAAAGTAATGAAGCAAATGGATATAGGCGTGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CCA 90 bp | TCCCACCAGCTGGTCTCTCTTGACGAACTCTGCACACTGTGGAACTaGCGATGTTTGAGAACATGGGGAAGAGACATTCTTCCTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SHQLVSLDELCTLWN*RCLRTWGRDILPVD Trigger: ATCAACAGGAAGAATGTCTCTTCCCCATGTTCTCAAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS GCA 90 bp | AGACTGCTGACTCTCATCTCTACAGCTCGAACTCTGACTGGAACCTaGAGAAATCTGACTGTCTGTTTCTGCAAGGCACACTTTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RLLTLISTARTLTGT*RNLTVCFCKAHFVV Trigger: GACCACAAAGTGTGCCTTGCAGAAACAGACAGTCAGATTTCTGCAGGTTCCAGTCAGAGTTCGAGCTGTAGAGATGAGAGTCAGCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS GCA 90 bp | TGTCAGTGTCATTTTCTGGCAATGGCAAACCCATACTCCCTGACTTaGTTTGGCTGTTTAATGCAACCTCAGCAAGAGGCGATCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: CQCHFLAMANPYSLT*FGCLMQPQQEAIHL Trigger: GAGGTGGATCGCCTCTTGCTGAGGTTGCATTAAACAGCCAAAGCAAGTCAGGGAGTATGGGTTTGCCATTGCCAGAAAATGACACTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS TCA 90 bp | TGGTCTCTCTTGACGAACTCTGCACACTGTGGAACTGGCGATGTTTaGGAACATGGGGAAGAGACATTCTTCCTGTTGATTTCAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WSLLTNSAHCGTGDV*EHGEETFFLLISAE Trigger: TTCAGCTGAAATCAACAGGAAGAATGTCTCTTCCCCATGTTCTCAAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS TCA 90 bp | TGGCTCTGCAAACCCTTAAAATTAATTTGCATCATTGGGAGGAGGTaGACCAAAGAGTCGCACATGTCTGTGGTTATGAGGGAACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: WLCKPLKLICIIGRR*TKESHMSVVMRELT Trigger: AGTCAGTTCCCTCATAACCACAGACATGTGCGACTCTTTGGTTCACCTCCTCCCAATGATGCAAATTAATTTTAAGGGTTTGCAGAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS TCA 90 bp | GAACTGGCGATGTTTGAGAACATGGGGAAGAGACATTCTTCCTGTTaGTTTCAGCTGAAGGCTGAGATGTTTCTAGATACTGCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ELAMFENMGKRHSSC*FQLKAEMFLDTASS Trigger: TGATGATGCAGTATCTAGAAACATCTCAGCCTTCAGCTGAAATCAACAGGAAGAATGTCTCTTCCCCATGTTCTCAAACATCGCCAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS GCA 72 bp | AGAACCTGGCGCTGCTGCAGCAAACAGCCCAGCCAATaGATCCGAGGGGCTGCCCAGAGGCTCCTTGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: RTWRCCSKQPSQ*IRGAAQRLLAI Trigger: GATAGCAAGGAGCCTCTGGGCAGCCCCTCGGATGCATTGGCTGGGCTGTTTGCTGCAGCAGCGCCAGGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS GCA 72 bp | CTGCAGCAAACAGCCCAGCCAATGCATCCGAGGGGCTaGCCAGAGGCTCCTTGCTATCTCGACTTTGAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LQQTAQPMHPRG*PEAPCYLDFER Trigger: TCGCTCAAAGTCGAGATAGCAAGGAGCCTCTGGGCAGCCCCTCGGATGCATTGGCTGGGCTGTTTGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CCA 72 bp | CCCCTGGAGCACCCAAGCCCTTGCGCGGTGATCCTCTaGTCTGACTTTGGGTTGGATGCAAAGGCAGACACT | + |
|
Preference number: 6 (lower is better) Translates to: PLEHPSPCAVIL*SDFGLDAKADT Trigger: AGTGTCTGCCTTTGCATCCAACCCAAAGTCAGACCAGAGGATCACCGCGCAAGGGCTTGGGTGCTCCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS CAA 90 bp | ACTGGGGCGTCTGACCCAGCAATGAGGAGAAGGGCATCTGGCAGCTaGGGCAGTATCCATCATAAACAGGGCGCACCTTCGGGGTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: TGASDPAMRRRASGS*GSIHHKQGAPSGSL Trigger: AAGTGACCCCGAAGGTGCGCCCTGTTTATGATGGATACTGCCCAAGCTGCCAGATGCCCTTCTCCTCATTGCTGGGTCAGACGCCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS TCA 72 bp | GGAGCACCCAAGCCCTTGCGCGGTGATCCTCTGGTCTaGCTTTGGGTTGGATGCAAAGGCAGACACTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GAPKPLRGDPLV*LWVGCKGRHLP Trigger: AGGCAAGTGTCTGCCTTTGCATCCAACCCAAAGTCAGACCAGAGGATCACCGCGCAAGGGCTTGGGTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS TCA 72 bp | ACAGTTAGCCCCTGGAGCACCCAAGCCCTTGCGCGGTaGTCCTCTGGTCTGACTTTGGGTTGGATGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVSPWSTQALAR*SSGLTLGWMQR Trigger: CCTTTGCATCCAACCCAAAGTCAGACCAGAGGATCACCGCGCAAGGGCTTGGGTGCTCCAGGGGCTAACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS GCA 72 bp | CAGCCAATGCATCCGAGGGGCTGCCCAGAGGCTCCTTaGTATCTCGACTTTGAGCGAGCAGGATGTGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QPMHPRGCPEAP*YLDFERAGCEC Trigger: ACACTCACATCCTGCTCGCTCAAAGTCGAGATAGCAAGGAGCCTCTGGGCAGCCCCTCGGATGCATTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CCA 72 bp | GCAGCACCTCCCACTGCCAAGGCAGGTGAAAGCAAGTaGAAGGCCGCATCTGTGTGTGGTAGGTCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAPPTAKAGESK*KAASVCGRSSW Trigger: CCAAGAAGACCTACCACACACAGATGCGGCCTTCCACTTGCTTTCACCTGCCTTGGCAGTGGGAGGTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS CAA 90 bp | GAGCACCCAAGCCCTTGCGCGGTGATCCTCTGGTCTGACTTTGGGTaGGATGCAAAGGCAGACACTTGCCTCCCTCCTTTTCAAGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EHPSPCAVILWSDFG*DAKADTCLPPFQVA Trigger: AGCCACTTGAAAAGGAGGGAGGCAAGTGTCTGCCTTTGCATCCAACCCAAAGTCAGACCAGAGGATCACCGCGCAAGGGCTTGGGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS CCA 72 bp | GCAACCTCAGCAAGAGGCGATCCACCTCCCACCAGCTaGTCTCTCTTGACGAACTCTGCACACTGTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: ATSARGDPPPTS*SLLTNSAHCGT Trigger: AGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTGGGAGGTGGATCGCCTCTTGCTGAGGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CAA 72 bp | GCAAGAGGCGATCCACCTCCCACCAGCTGGTCTCTCTaGACGAACTCTGCACACTGTGGAACTGGCGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: ARGDPPPTSWSL*TNSAHCGTGDV Trigger: AACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTGGGAGGTGGATCGCCTCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS TCA 72 bp | CAAGAGGCGATCCACCTCCCACCAGCTGGTCTCTCTTaGCGAACTCTGCACACTGTGGAACTGGCGATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QEAIHLPPAGLS*RTLHTVELAMF Trigger: AAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTGGGAGGTGGATCGCCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS TCA 72 bp | GAATCCAAACACTCAAACACATGCCACTGGGGCGTCTaGCCCAGCAATGAGGAGAAGGGCATCTGGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESKHSNTCHWGV*PSNEEKGIWQL Trigger: AAGCTGCCAGATGCCCTTCTCCTCATTGCTGGGTCAGACGCCCCAGTGGCATGTGTTTGAGTGTTTGGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS GCA 72 bp | TCCACCTCCCACCAGCTGGTCTCTCTTGACGAACTCTaGACACTGTGGAACTGGCGATGTTTGAGAACATGG | + |
|
Preference number: 6 (lower is better) Translates to: STSHQLVSLDEL*TLWNWRCLRTW Trigger: CCATGTTCTCAAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTGGGAGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CCA 72 bp | CATAGAGCGTCTTTCCTCAAGGTTACAAGGAGAACCTaGCGCTGCTGCAGCAAACAGCCCAGCCAATGCATC | + |
|
Preference number: 6 (lower is better) Translates to: HRASFLKVTRRT*RCCSKQPSQCI Trigger: GATGCATTGGCTGGGCTGTTTGCTGCAGCAGCGCCAGGTTCTCCTTGTAACCTTGAGGAAAGACGCTCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS GCA 72 bp | TGGTCTGACTTTGGGTTGGATGCAAAGGCAGACACTTaGCTCCCTCCTTTTCAAGTGGCTTTGACCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WSDFGLDAKADT*LPPFQVALTWL Trigger: GAGCCAGGTCAAAGCCACTTGAAAAGGAGGGAGGCAAGTGTCTGCCTTTGCATCCAACCCAAAGTCAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS CCA 72 bp | CACCAGCTGGTCTCTCTTGACGAACTCTGCACACTGTaGAACTGGCGATGTTTGAGAACATGGGGAAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HQLVSLDELCTL*NWRCLRTWGRD Trigger: GTCTCTTCCCCATGTTCTCAAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CAA 90 bp | GCTTGGGCAGTATCCATCATAAACAGGGCGCACCTTCGGGGTCACTaGCTTCCCTCTGCGAGTTCTATGTTGCTTTTTCGGTGTTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: AWAVSIINRAHLRGH*LPSASSMLLFRCCL Trigger: GAGACAACACCGAAAAAGCAACATAGAACTCGCAGAGGGAAGCAAGTGACCCCGAAGGTGCGCCCTGTTTATGATGGATACTGCCCAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS GCA 72 bp | AAACAGGGCGCACCTTCGGGGTCACTTGCTTCCCTCTaGGAGTTCTATGTTGCTTTTTCGGTGTTGTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KQGAPSGSLASL*EFYVAFSVLSL Trigger: AAGAGACAACACCGAAAAAGCAACATAGAACTCGCAGAGGGAAGCAAGTGACCCCGAAGGTGCGCCCTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS CAA 72 bp | CGAGGGGCTGCCCAGAGGCTCCTTGCTATCTCGACTTaGAGCGAGCAGGATGTGAGTGTATTTCTTATAATG | + |
|
Preference number: 6 (lower is better) Translates to: RGAAQRLLAIST*SEQDVSVFLIM Trigger: CATTATAAGAAATACACTCACATCCTGCTCGCTCAAAGTCGAGATAGCAAGGAGCCTCTGGGCAGCCCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CAA 90 bp | CAATGCATCCGAGGGGCTGCCCAGAGGCTCCTTGCTATCTCGACTTaGAGCGAGCAGGATGTGAGTGTATTTCTTATAATGGGAAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QCIRGAAQRLLAIST*SEQDVSVFLIMGRN Trigger: ATTCCTTCCCATTATAAGAAATACACTCACATCCTGCTCGCTCAAAGTCGAGATAGCAAGGAGCCTCTGGGCAGCCCCTCGGATGCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CCA 72 bp | GTAGGTCTTCTTGGGAAAGCCTGTGTCAGAGATAGGTaGAGAATCCAAACACTCAAACACATGCCACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGLLGKACVRDR*RIQTLKHMPLG Trigger: CCCCAGTGGCATGTGTTTGAGTGTTTGGATTCTCCACCTATCTCTGACACAGGCTTTCCCAAGAAGACCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183143.9 |
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| CDS CCA 72 bp | TCTGGCAATGGCAAACCCATACTCCCTGACTTGCTTTaGCTGTTTAATGCAACCTCAGCAAGAGGCGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGNGKPILPDLL*LFNATSARGDP Trigger: TGGATCGCCTCTTGCTGAGGTTGCATTAAACAGCCAAAGCAAGTCAGGGAGTATGGGTTTGCCATTGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CCA 72 bp | CCTATATCCATTTGCTTCATTACTTTCTTAGACGGTTaGCTCGGGCTGCACTTGGGACTGGAAGGCGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: PISICFITFLDG*LGLHLGLEGDV Trigger: CACATCGCCTTCCAGTCCCAAGTGCAGCCCGAGCCAACCGTCTAAGAAAGTAATGAAGCAAATGGATATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CAA 72 bp | GCCTATATCCATTTGCTTCATTACTTTCTTAGACGGTaGGCTCGGGCTGCACTTGGGACTGGAAGGCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: AYIHLLHYFLRR*ARAALGTGRRC Trigger: ACATCGCCTTCCAGTCCCAAGTGCAGCCCGAGCCAACCGTCTAAGAAAGTAATGAAGCAAATGGATATAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CAA 90 bp | CTGTCAGTGTCATTTTCTGGCAATGGCAAACCCATACTCCCTGACTaGCTTTGGCTGTTTAATGCAACCTCAGCAAGAGGCGATCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LSVSFSGNGKPILPD*LWLFNATSARGDPP Trigger: AGGTGGATCGCCTCTTGCTGAGGTTGCATTAAACAGCCAAAGCAAGTCAGGGAGTATGGGTTTGCCATTGCCAGAAAATGACACTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS GCA 72 bp | CATTTTCTGGCAATGGCAAACCCATACTCCCTGACTTaGTTTGGCTGTTTAATGCAACCTCAGCAAGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: HFLAMANPYSLT*FGCLMQPQQEA Trigger: CGCCTCTTGCTGAGGTTGCATTAAACAGCCAAAGCAAGTCAGGGAGTATGGGTTTGCCATTGCCAGAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CCA 72 bp | CTGGTCTCTCTTGACGAACTCTGCACACTGTGGAACTaGCGATGTTTGAGAACATGGGGAAGAGACATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LVSLDELCTLWN*RCLRTWGRDIL Trigger: AAGAATGTCTCTTCCCCATGTTCTCAAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CAA 90 bp | CCCTCTGCGAGTTCTATGTTGCTTTTTCGGTGTTGTCTCTTTGTTTaGAGACTGCTGACTCTCATCTCTACAGCTCGAACTCTGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSASSMLLFRCCLFV*RLLTLISTARTLTG Trigger: TCCAGTCAGAGTTCGAGCTGTAGAGATGAGAGTCAGCAGTCTCAAAACAAAGAGACAACACCGAAAAAGCAACATAGAACTCGCAGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS CAA 72 bp | TCATTTTCTGGCAATGGCAAACCCATACTCCCTGACTaGCTTTGGCTGTTTAATGCAACCTCAGCAAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SFSGNGKPILPD*LWLFNATSARG Trigger: GCCTCTTGCTGAGGTTGCATTAAACAGCCAAAGCAAGTCAGGGAGTATGGGTTTGCCATTGCCAGAAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS TCA 72 bp | TTGACGAACTCTGCACACTGTGGAACTGGCGATGTTTaGGAACATGGGGAAGAGACATTCTTCCTGTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: LTNSAHCGTGDV*EHGEETFFLLI Trigger: AATCAACAGGAAGAATGTCTCTTCCCCATGTTCTCAAACATCGCCAGTTCCACAGTGTGCAGAGTTCGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CAA 72 bp | GCTTCCCTCTGCGAGTTCTATGTTGCTTTTTCGGTGTaGTCTCTTTGTTTTGAGACTGCTGACTCTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASLCEFYVAFSV*SLCFETADSHL Trigger: GAGATGAGAGTCAGCAGTCTCAAAACAAAGAGACAACACCGAAAAAGCAACATAGAACTCGCAGAGGGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS CAA 90 bp | TCTGATTGCCAACAGCTGATGTTTCAATTTTCTGTTGCTGATGACTaGATGCAAGTGAGAGGAATTTTTCTGGCTCGTCGAGCTTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SDCQQLMFQFSVADD*MQVRGIFLARRAWP Trigger: AGGCCAAGCTCGACGAGCCAGAAAAATTCCTCTCACTTGCATCAAGTCATCAGCAACAGAAAATTGAAACATCAGCTGTTGGCAATCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS CAA 90 bp | TTTGAGCGAGCAGGATGTGAGTGTATTTCTTATAATGGGAAGGAATaGTGGAAGTACATAGCAAACCCTCGGGACATTCTGTGTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FERAGCECISYNGKE*WKYIANPRDILCQR Trigger: TCTCTGACACAGAATGTCCCGAGGGTTTGCTATGTACTTCCACAATTCCTTCCCATTATAAGAAATACACTCACATCCTGCTCGCTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CAA 72 bp | GCAGGATGTGAGTGTATTTCTTATAATGGGAAGGAATaGTGGAAGTACATAGCAAACCCTCGGGACATTCTG | + |
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Preference number: 6 (lower is better) Translates to: AGCECISYNGKE*WKYIANPRDIL Trigger: CAGAATGTCCCGAGGGTTTGCTATGTACTTCCACAATTCCTTCCCATTATAAGAAATACACTCACATCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS TCA 72 bp | AAACCCTTAAAATTAATTTGCATCATTGGGAGGAGGTaGACCAAAGAGTCGCACATGTCTGTGGTTATGAGG | + |
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Preference number: 6 (lower is better) Translates to: KPLKLICIIGRR*TKESHMSVVMR Trigger: CCTCATAACCACAGACATGTGCGACTCTTTGGTTCACCTCCTCCCAATGATGCAAATTAATTTTAAGGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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| CDS CAA 72 bp | AGTTCTATGTTGCTTTTTCGGTGTTGTCTCTTTGTTTaGAGACTGCTGACTCTCATCTCTACAGCTCGAACT | + |
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Preference number: 6 (lower is better) Translates to: SSMLLFRCCLFV*RLLTLISTART Trigger: AGTTCGAGCTGTAGAGATGAGAGTCAGCAGTCTCAAAACAAAGAGACAACACCGAAAAAGCAACATAGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 ENSMUST00000183143.9 |
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| CDS TCA 72 bp | ATGTTTGAGAACATGGGGAAGAGACATTCTTCCTGTTaGTTTCAGCTGAAGGCTGAGATGTTTCTAGATACT | + |
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Preference number: 6 (lower is better) Translates to: MFENMGKRHSSC*FQLKAEMFLDT Trigger: AGTATCTAGAAACATCTCAGCCTTCAGCTGAAATCAACAGGAAGAATGTCTCTTCCCCATGTTCTCAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182059.3 ENSMUST00000182276.3 |
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