Pregenerated sensors for DCLK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032500Ensembl transcript IDs: ENSMUST00000111879.5
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCTTGAGCGATGTGAAGCACACTCCTGTAGCCTACCATGGATGTaGATACAAGGAGAAAACAGAATCTGTCATTATTATCAAAATTCC | + |
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Preference number: 1 (lower is better) Translates to: ELERCEAHSCSLPWM*IQGENRICHYYQNS Trigger: GGAATTTTGATAATAATGACAGATTCTGTTTTCTCCTTGTATTCACATCCATGGTAGGCTACAGGAGTGTGCTTCACATCGCTCAAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| 3UTR CCA 72 bp | AATATGCCAGGTGGCTCTTCTCCTTCCCTAATTCTGTaGAGAAGGGTCTTGCACAGCCTTGCTTGTAGACTA | + |
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Preference number: 3 (lower is better) Translates to: NMPGGSSPSLIL*RRVLHSLACRL Trigger: TAGTCTACAAGCAAGGCTGTGCAAGACCCTTCTCCACAGAATTAGGGAAGGAGAAGAGCCACCTGGCATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| 3UTR TCA 72 bp | CGATGTGAAGCACACTCCTGTAGCCTACCATGGATGTaGATACAAGGAGAAAACAGAATCTGTCATTATTAT | + |
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Preference number: 3 (lower is better) Translates to: RCEAHSCSLPWM*IQGENRICHYY Trigger: ATAATAATGACAGATTCTGTTTTCTCCTTGTATTCACATCCATGGTAGGCTACAGGAGTGTGCTTCACATCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGGGGGTTCGGCCTGCTaGTCTCTCCGGAGCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: QAGQMSQAGLWHLLCNLLGGSAC*SLRSQA Trigger: CGCCTGGCTCCGGAGAGAGCAGCAGGCCGAACCCCC...AAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | AGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGGGGGGTCCCTGGGACTaGCCCGATGGCTGTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: RLDRCPRQDYGICSATFLGGPWD*PDGCHP Trigger: AGGGTGACAGCCATCGGGGCAGTCCCAGGGACCCCC...CAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | AGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGGTGCTCTGCGCGGACTaGGTGGAGGCTGCTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RLDRCPRQDYGICSATFLVLCAD*VEAALR Trigger: CCTCAGAGCAGCCTCCACTCAGTCCGCGCAGAGCAC...CAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTCACCCTGGGCTTCAGTaGGCTGTGCTCTGCGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: QAGQMSQAGLWHLLCNLLHPGLQ*AVLCAD Trigger: GTCCGCGCAGAGCACAGCCCACTGAAGCCCAGGGTG...AAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTGTGGGGGTTCGGCCTaGTGCTCTCTCCGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADCGGSA*CSLRSQ Trigger: CTGGCTCCGGAGAGAGCAGCAGGCCGAACCCCCACA...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | AGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGCCACCGTCACCACCCTaGGCTTCAGTGGGCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RLDRCPRQDYGICSATFLPPSPP*ASVGCA Trigger: AGCACAGCCCACTGAAGCCCAGGGTGGTGACGGTGG...CAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACCCAGGTCCAGCTCACTaGTTCCCAGCGGGCACGGCT | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADPGPAH*FPAGTA Trigger: AGCCGTGCCCGCTGGGAACCAGTGAGCTGGACCTGG...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACGAGTGGAGGCTGCTCTaGGGGCTGAACAGCGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GRIMASALQPSCADSGSDEWRLL*GLNSGM Trigger: CATGCCGCTGTTCAGCCCTCAGAGCAGCCTCCACTC...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACGGCTTCAGTGGGCTGTaGTCTGCGCGGACTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADGFSGL*SARTEW Trigger: CCACTCAGTCCGCGCAGAGCACAGCCCACTGAAGCC...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACCTGGGACTGCCCCGATaGCTGTCACCCTTCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADLGLPR*LSPFHP Trigger: AGGGTGGAAGGGTGACAGCCATCGGGGCAGTCCCAG...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACCTCAAAGGTCTGCACTaGGCGCCGGTTGAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADLKGLH*APVEEQ Trigger: CTGCTCCTCAACCGGCGCTCAGTGCAGACCTTTGAG...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGCTTGCTGGGAAGTCTaGTTCTCAGCCTTGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QAGQMSQAGLWHLLCNLLACWEV*FSALGR Trigger: CCTCCCCAAGGCTGAGAAGCAGACTTCCCAGCAAGC...AAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACCTTCTGGGCCTTGGGTaGCCCCTGAGGATGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADLLGLG*PLRMTV Trigger: GACAGTCATCCTCAGGGGGCACCCAAGGCCCAGAAG...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACCGGCATGCTTGCTCCTaGATGTGTGCCGGTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GRIMASALQPSCADSGSDRHACS*MCAGPL Trigger: GAGAGGACCGGCACACATGCAGGAGCAAGCATGCCG...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTCCTCTTACCCACTTCTaGGCCCTCGCCTTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGQMSQAGLWHLLCNLLPLTHF*ALALSS Trigger: AGAAGACAAGGCGAGGGCCCAGAAGTGGGTAAGAGG...AAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACCCTGGCTTCTTCTCGTaGTCTGCTTGCTTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADPGFFS*SACFSS Trigger: GGAGGAGAAGCAAGCAGAGCACGAGAAGAAGCCAGG...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| 3UTR CAA 72 bp | GGCTCTTCTCCTTCCCTAATTCTGTGGAGAAGGGTCTaGCACAGCCTTGCTTGTAGACTAGACGTCCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GSSPSLILWRRV*HSLACRLDVPS Trigger: AGAGGGGACGTCTAGTCTACAAGCAAGGCTGTGCAAGACCCTTCTCCACAGAATTAGGGAAGGAGAAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACAACCAGGAGGTTTTCTaGTTTCACGTCCCGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GRIMASALQPSCADSGSDNQEVF*FHVPVD Trigger: GTCCACCGGGACGTGAAACCAGAAAACCTCCTGGTT...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | AACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCTCCTTCCCTGAGGGGACTCTACTGTaGGGGGCCAGGGCAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NIAFKHSLKYARWLFSFPEGTLL*GARARA Trigger: GGCTCTTGCCCTGGCCCCTCACAGTAGAGTCCCCTC...AGGGAAGGAGAAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACCTCTGCAGGCCCAACTaGAGCTCTCTTTCTCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADLCRPN*SSLSLL Trigger: TAAGAGAGAAAGAGAGCTGCAGTTGGGCCTGCAGAG...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACAAGCATTTCAGAGAATaGTCACATGGGCCTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRIMASALQPSCADSGSDKHFRE*SHGPRW Trigger: CCACCGAGGCCCATGTGACCATTCTCTGAAATGCTT...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | AGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGGATACAGCTCCTCCATaGCCAACTGGATACTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RLDRCPRQDYGICSATFLDTAPP*PTGYSS Trigger: TGAAGAGTATCCAGTTGGCCATGGAGGAGCTGTATC...CAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACCTTTCAGAAGCTTGCTaGGAAGTCTGCTTCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GRIMASALQPSCADSGSDLSEAC*EVCFSA Trigger: GGCTGAGAAGCAGACTTCCCAGCAAGCTTCTGAAAG...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGCCTCACCACATATTTaGCCAAGCCAAAATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QAGQMSQAGLWHLLCNLLASPHI*PSQNQP Trigger: TGGCTGATTTTGGCTTGGCCAAATATGTGGTGAGGC...AAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGAGTTCCCTGTGTTaGTATGCCCAACCATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: QAGQMSQAGLWHLLCNLLVSSLC*YAQPSQ Trigger: TTGAGATGGTTGGGCATACCAACACAGGGAACTCAC...AAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | AAGCACACTCCTGTAGCCTACCATGGATGTGAATACAAGGAGAAAACAGAATCTCGCGCTATAGCTTCCTaGCTCCCCACAGCGGTGACT | + |
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Preference number: 4 (lower is better) Translates to: KHTPVAYHGCEYKEKTESRAIAS*LPTAVT Trigger: AGTCACCGCTGTGGGGAGGCAGGAAGCTATAGCGCG...AGATTCTGTTTTCTCCTTGTATTCACATCCATGGTAGGCTACAGGAGTGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACACGATATTCTTGTCGTaGATGTGGACGAGGGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: GRIMASALQPSCADSGSDTIFLS*MWTRAL Trigger: TAAGGCCCTCGTCCACATGCACGACAAGAATATCGT...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCCTCCATGGCCAACTaGATACTCTTCAATGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADSSMAN*ILFNVS Trigger: GCTGACATTGAAGAGTATCCAGTTGGCCATGGAGGA...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | AAGCACACTCCTGTAGCCTACCATGGATGTGAATACAAGGAGAAAACAGAATCTCTGGGGCCAGCACTGTaGAAGTCTTGCCCTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: KHTPVAYHGCEYKEKTESLGPAL*KSCPDA Trigger: GGCATCAGGGCAAGACTTCCACAGTGCTGGCCCCAG...AGATTCTGTTTTCTCCTTGTATTCACATCCATGGTAGGCTACAGGAGTGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | AACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCTCCTTCCCTGGTCCTTCTGGGCCTTaGGTGCCCCCTGAGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: NIAFKHSLKYARWLFSFPGPSGP*VPPEDD Trigger: GTCATCCTCAGGGGGCACCCAAGGCCCAGAAGGACC...AGGGAAGGAGAAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | AACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCTCCTTCCCTCCCCTCCTCTACAGCTaGTGGCCCTTCCACGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: NIAFKHSLKYARWLFSFPPLLYS*WPFHEV Trigger: GACCTCGTGGAAGGGCCACCAGCTGTAGAGGAGGGG...AGGGAAGGAGAAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACTCAAACTGGCCCACTTaGATGATGTTGAAGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: GRIMASALQPSCADSGSDSNWPT*MMLKSS Trigger: CGAGCTCTTCAACATCATCCAAGTGGGCCAGTTTGA...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACGAGAGGAACTCAAACTaGCCCACTTGGATGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADERNSN*PTWMML Trigger: CAACATCATCCAAGTGGGCCAGTTTGAGTTCCTCTC...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | AAGCACACTCCTGTAGCCTACCATGGATGTGAATACAAGGAGAAAACAGAATCTGCCTCCCCACAGCGGTaGCTTCCTTTCAGAAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: KHTPVAYHGCEYKEKTESASPQR*LPFRSL Trigger: CAAGCTTCTGAAAGGAAGTCACCGCTGTGGGGAGGC...AGATTCTGTTTTCTCCTTGTATTCACATCCATGGTAGGCTACAGGAGTGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | AACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCTCCTTCCCTTCGGAATCCCTCTTCTaGGCTCTCCCCAGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NIAFKHSLKYARWLFSFPSESLF*ALPRSS Trigger: GCTGGACCTGGGGAGAGCTCAGAAGAGGGATTCCGA...AGGGAAGGAGAAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACGACTTTCTGAGCCTCTaGTCTCTTTCTTGTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: GRIMASALQPSCADSGSDDFLSL*SLSCLS Trigger: ACTCAGACAAGAAAGAGATCAGAGGCTCAGAAAGTC...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACGCAGTTTCACAATGTTaGGATGAGAGAGACTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADAVSQC*DERDSG Trigger: TCCAGAGTCTCTCTCATCCCAACATTGTGAAACTGC...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACGAGAGAGACTCTGGATaGTTAAAATCTCACTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: TDVPGRIMASALQPSCADERDSG*LKSHCR Trigger: TCGACAGTGAGATTTTAATCATCCAGAGTCTCTCTC...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | AACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCTCCTTCCCTCCTCAGAAGGCCTCCTaGAGCTCTTGGTCCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: NIAFKHSLKYARWLFSFPPQKAS*SSWSSP Trigger: TGGTGAGGACCAAGAGCTGCAGGAGGCCTTCTGAGG...AGGGAAGGAGAAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | AAGCACACTCCTGTAGCCTACCATGGATGTGAATACAAGGAGAAAACAGAATCTCTTCTTCTCGTGCTCTaGTTGCTTCTCCTCCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: KHTPVAYHGCEYKEKTESLLLVL*LLLLPS Trigger: CGAGGGGAGGAGAAGCAAGCAGAGCACGAGAAGAAG...AGATTCTGTTTTCTCCTTGTATTCACATCCATGGTAGGCTACAGGAGTGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | AACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCTCCTTCCCTCCTCGCCTTGTCTTCTaGGGCCAGCACTGTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: NIAFKHSLKYARWLFSFPPRLVF*GQHCGS Trigger: ACTTCCACAGTGCTGGCCCCAGAAGACAAGGCGAGG...AGGGAAGGAGAAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | AAGCACACTCCTGTAGCCTACCATGGATGTGAATACAAGGAGAAAACAGAATCTTGGCGTAAGCCTGCTTaGTCTCTCGGTGCCTGCATT | + |
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Preference number: 4 (lower is better) Translates to: KHTPVAYHGCEYKEKTESWRKPA*SLGACI Trigger: AATGCAGGCACCGAGAGACCAAGCAGGCTTACGCCA...AGATTCTGTTTTCTCCTTGTATTCACATCCATGGTAGGCTACAGGAGTGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | AAGCACACTCCTGTAGCCTACCATGGATGTGAATACAAGGAGAAAACAGAATCTTGTCTGAGTTGCTGTTaGGCCTCCTCAGTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KHTPVAYHGCEYKEKTESCLSCC*ASSVPE Trigger: CTCAGGAACTGAGGAGGCCCAACAGCAACTCAGACA...AGATTCTGTTTTCTCCTTGTATTCACATCCATGGTAGGCTACAGGAGTGTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCATGACGGCACCACGTaGCCCCAGAACTGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALHDGTT*PQNWLL Trigger: GAGAAGCCAGTTCTGGGGCCACGTGGTGCCGTCATG...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCGGGCCACCAGGTTCTaGCTCCTGTTTCCCTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALRATRF*LLFPSY Trigger: GTAAGAGGGAAACAGGAGTCAGAACCTGGTGGCCCG...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCAGAGAATGGTCACATaGGCCTCGGTGGCCCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALQRMVT*ASVARN Trigger: ATTCCGGGCCACCGAGGCCCATGTGACCATTCTCTG...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTGGACTCCTCCTTCTGTaGGTTCCCTGTGTTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALGLLLL*VPCVGM Trigger: CATACCAACACAGGGAACTCACAGAAGGAGGAGTCC...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR GCA 90 bp | AACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTCTCCTTCCCTTTCCTTTCAGAAGCTTaGTGGGAAGTCTGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NIAFKHSLKYARWLFSFPFLSEA*WEVCFS Trigger: TGAGAAGCAGACTTCCCAGCAAGCTTCTGAAAGGAA...AGGGAAGGAGAAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTTTGAAGAGCTCGTCTTaGTCCCTCTCAGGACTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALLKSSS*SLSGLR Trigger: CCGAAGTCCTGAGAGGGACCAAGACGAGCTCTTCAA...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTTACACTTCTCACATCTaGCAATCTCCCCGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALYTSHI*QSPRRS Trigger: AGACCTCCGGGGAGATTGTCAGATGTGAGAAGTGTA...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTTTCTTGTCGTGCATGTaGACGAGGGCCTTACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALFLSCM*TRALHK Trigger: CTTGTGTAAGGCCCTCGTCCACATGCACGACAAGAA...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTTGCAGCCTCGGGCTCTaGAAACTTCACATTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALCSLGL*KLHIFN Trigger: GTTGAAAATGTGAAGTTTCCAGAGCCCGAGGCTGCA...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTAGGAGCTACATATGTTaGCGTCCCACACACAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALRSYIC*RPTHSK Trigger: TTTACTGTGTGTGGGACGCCAACATATGTAGCTCCT...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR TCA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTTTCACAATGTTGGGATaGGAGAGACTCTGGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: STLEHCFQTLFKICQVALFTMLG*ERLWMI Trigger: AATCATCCAGAGTCTCTCTCATCCCAACATTGTGAA...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 90 bp | TGCACTGAGCGCCGGTTGAGGAGCAGGGTGGCCTTACGGAGGGGCTaGCCACCCAGCTTCACCACCGTCACCACCCTGGGCTTCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTERRLRSRVALRRG*PPSFTTVTTLGFSG Trigger: CCCACTGAAGCCCAGGGTGGTGACGGTGGTGAAGCTGGGTGGGCAGCCCCTCCGTAAGGCCACCCTGCTCCTCAACCGGCGCTCAGTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | CCTTACGGAGGGGCTGCCCACCCAGCTTCACCACCGTCACCACCCTaGGCTTCAGTGGGCTGTGCTCTGCGCGGACTGAGTGGAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PYGGAAHPASPPSPP*ASVGCALRGLSGGC Trigger: GCAGCCTCCACTCAGTCCGCGCAGAGCACAGCCCACTGAAGCCCAGGGTGGTGACGGTGGTGAAGCTGGGTGGGCAGCCCCTCCGTAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 90 bp | CACCGTCACCACCCTGGGCTTCAGTGGGCTGTGCTCTGCGCGGACTaGGTGGAGGCTGCTCTGAGGGCTGAACAGCGGCATGACGGCACC | + |
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Preference number: 5 (lower is better) Translates to: HRHHPGLQWAVLCAD*VEAALRAEQRHDGT Trigger: GGTGCCGTCATGCCGCTGTTCAGCCCTCAGAGCAGCCTCCACTCAGTCCGCGCAGAGCACAGCCCACTGAAGCCCAGGGTGGTGACGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 90 bp | GTGGGGGTTCGGCCTGCTGCTCTCTCCGGAGCCAGGCGGCATGCTTaGTCCTGCATGTGTGCCGGTCCTCTCTCCTCATGTCTATCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGVRPAALSGARRHA*SCMCAGPLSSCLSA Trigger: GGCCGATAGACATGAGGAGAGAGGACCGGCACACATGCAGGAGCAAGCATGCCGCCTGGCTCCGGAGAGAGCAGCAGGCCGAACCCCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | GTGCCGGTCCTCTCTCCTCATGTCTATCGGCCCCTCCTCTACAGCTaGTGGCCCTTCCACGAGGTCCTTCTGGGCCTTGGGTGCCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPVLSPHVYRPLLYS*WPFHEVLLGLGCPL Trigger: CAGGGGGCACCCAAGGCCCAGAAGGACCTCGTGGAAGGGCCACCAGCTGTAGAGGAGGGGCCGATAGACATGAGGAGAGAGGACCGGCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | ATCTTCGAGCTTAAGCATTTCAGAGAATGGTCACATGGGCCTCGGTaGCCCGGAATGGGAGGCGCAGGGCGACTGGGTGCCGGCGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: IFELKHFREWSHGPR*PGMGGAGRLGAGGA Trigger: CGCCCCGCCGGCACCCAGTCGCCCTGCGCCTCCCATTCCGGGCCACCGAGGCCCATGTGACCATTCTCTGAAATGCTTAAGCTCGAAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 90 bp | CTCCTGCAGCTCTTGGTCCTCACCAACTTCTCGGAATCCCTCTTCTaGGCTCTCCCCAGGTCCAGCTCACTGGTTCCCAGCGGGCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLQLLVLTNFSESLF*ALPRSSSLVPSGHG Trigger: GCCGTGCCCGCTGGGAACCAGTGAGCTGGACCTGGGGAGAGCTCAGAAGAGGGATTCCGAGAAGTTGGTGAGGACCAAGAGCTGCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 90 bp | AGATGTCTGATAGGAGCTGCTCAAAGGTCTGCACTGAGCGCCGGTTaGGGAGCAGGGTGGCCTTACGGAGGGGCTGCCCACCCAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RCLIGAAQRSALSAG*GAGWPYGGAAHPAS Trigger: TGAAGCTGGGTGGGCAGCCCCTCCGTAAGGCCACCCTGCTCCTCAACCGGCGCTCAGTGCAGACCTTTGAGCAGCTCCTATCAGACATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 90 bp | AAGCCCAAGGCTTCGGAGATGTCTGATAGGAGCTGCTCAAAGGTCTaGACTGAGCGCCGGTTGAGGAGCAGGGTGGCCTTACGGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPKASEMSDRSCSKV*TERRLRSRVALRRG Trigger: GCCCCTCCGTAAGGCCACCCTGCTCCTCAACCGGCGCTCAGTGCAGACCTTTGAGCAGCTCCTATCAGACATCTCCGAAGCCTTGGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 90 bp | TTCCAGCGTGGGAAGCCCAAGGCTTCGGAGATGTCTGATAGGAGCTaGTCAAAGGTCTGCACTGAGCGCCGGTTGAGGAGCAGGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQRGKPKASEMSDRS*SKVCTERRLRSRVA Trigger: GGCCACCCTGCTCCTCAACCGGCGCTCAGTGCAGACCTTTGAGCAGCTCCTATCAGACATCTCCGAAGCCTTGGGCTTCCCACGCTGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | GGCGGGCCACCAGGTTCTGACTCCTGTTTCCCTCTTACCCACTTCTaGGCCCTCGCCTTGTCTTCTGGGGCCAGCACTGTGGAAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGPPGSDSCFPLTHF*ALALSSGASTVEVL Trigger: CAAGACTTCCACAGTGCTGGCCCCAGAAGACAAGGCGAGGGCCCAGAAGTGGGTAAGAGGGAAACAGGAGTCAGAACCTGGTGGCCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 90 bp | CTCCCCAGGTCCAGCTCACTGGTTCCCAGCGGGCACGGCTCCCTCTaGAGGCCCAACTGCAGCTCTCTTTCTCTCTTACACTTCTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LPRSSSLVPSGHGSL*RPNCSSLSLLHFSH Trigger: ATGTGAGAAGTGTAAGAGAGAAAGAGAGCTGCAGTTGGGCCTGCAGAGGGAGCCGTGCCCGCTGGGAACCAGTGAGCTGGACCTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 90 bp | ATCCCCAATGACCCCACCTATGTCATAGTGCTTCTCCACATCCGCTaGGATGATGCCCTTGGGCCTCGGCTTCCGGCCACTGGGTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPNDPTYVIVLLHIR*DDALGPRLPATGSF Trigger: GAACGACCCAGTGGCCGGAAGCCGAGGCCCAAGGGCATCATCTCAGCGGATGTGGAGAAGCACTATGACATAGGTGGGGTCATTGGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | GTGACTTCCTTTCAGAAGCTTGCTGGGAAGTCTGCTTCTCAGCCTTaGGGAGGGGACTCTACTGTGAGGGGCCAGGGCAAGAGCCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VTSFQKLAGKSASQP*GGDSTVRGQGKSPV Trigger: AACCGGGCTCTTGCCCTGGCCCCTCACAGTAGAGTCCCCTCCCCAAGGCTGAGAAGCAGACTTCCCAGCAAGCTTCTGAAAGGAAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | CTCCTGTTTCCCTCTTACCCACTTCTGGGCCCTCGCCTTGTCTTCTaGGGCCAGCACTGTGGAAGTCTTGCCCTGATGCCTAGAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFPSYPLLGPRLVF*GQHCGSLALMPRDC Trigger: GCAGTCTCTAGGCATCAGGGCAAGACTTCCACAGTGCTGGCCCCAGAAGACAAGGCGAGGGCCCAGAAGTGGGTAAGAGGGAAACAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | CAGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGCTGAGATGATGCCCTaGGGCCTCGGCTTCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QAGQMSQAGLWHLLCNLLAEMMP*GLGFRP Trigger: TGGCCGGAAGCCGAGGCCCAAGGGCATCATCTCAGC...AAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | GGCAGCTTTCTCTCAGAGATCTTCGAGCTTAAGCATTTCAGAGAATaGTCACATGGGCCTCGGTGGCCCGGAATGGGAGGCGCAGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GSFLSEIFELKHFRE*SHGPRWPGMGGAGR Trigger: TCGCCCTGCGCCTCCCATTCCGGGCCACCGAGGCCCATGTGACCATTCTCTGAAATGCTTAAGCTCGAAGATCTCTGAGAGAAAGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTGCACTGAGCGCCGGTaGAGGAGCAGGGTGGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TDVPGRIMASALQPSCADCTERR*RSRVAL Trigger: TAAGGCCACCCTGCTCCTCAACCGGCGCTCAGTGCA...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | AGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTTCACCTCCCTGCCCTaGAGGGTGAACAGCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RLDRCPRQDYGICSATFLFTSLP*RVNSFR Trigger: GCGGAAGCTGTTCACCCTCAAGGGCAGGGAGGTGAA...CAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACGGCCTCCTGCAGCTCTaGGTCCTCACCAACTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GRIMASALQPSCADSGSDGLLQL*VLTNFS Trigger: CGAGAAGTTGGTGAGGACCAAGAGCTGCAGGAGGCC...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACCTTCTCGTGCTCTGCTaGCTTCTCCTCCCCTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRIMASALQPSCADSGSDLLVLC*LLLPSG Trigger: ACCCGAGGGGAGGAGAAGCAAGCAGAGCACGAGAAG...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACGTCTGCTTCTCAGCCTaGGGGAGGGGACTCTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRIMASALQPSCADSGSDVCFSA*GRGLYC Trigger: ACAGTAGAGTCCCCTCCCCAAGGCTGAGAAGCAGAC...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | CCTTCAGCTGGGACTTGTCAATCATCTTCATGGCGTAAGCCTGCTTaGTCTCTCGGTGCCTGCATTCCTTCACGGTGGCAAAGTTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSAGTCQSSSWRKPA*SLGACIPSRWQSCH Trigger: ATGGCAACTTTGCCACCGTGAAGGAATGCAGGCACCGAGAGACCAAGCAGGCTTACGCCATGAAGATGATTGACAAGTCCCAGCTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | CAATGTCCTCCTTACCCTTCAGCTGGGACTTGTCAATCATCTTCATaGCGTAAGCCTGCTTGGTCTCTCGGTGCCTGCATTCCTTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: QCPPYPSAGTCQSSS*RKPAWSLGACIPSR Trigger: CCGTGAAGGAATGCAGGCACCGAGAGACCAAGCAGGCTTACGCCATGAAGATGATTGACAAGTCCCAGCTGAAGGGTAAGGAGGACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | ACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACCGGTGGACGATATTCTaGTCGTGCATGTGGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TDVPGRIMASALQPSCADRWTIF*SCMWTR Trigger: CCTCGTCCACATGCACGACAAGAATATCGTCCACCG...GTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 90 bp | TTTCAACGATGGCATCAAAAAGGTCCCCTCCCTGCACATACTCCATaGTCAGGTAGATCTCCGCCTCCGTCTCGTAGACCTCGTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FQRWHQKGPLPAHTP*SGRSPPPSRRPRAV Trigger: AACTGCACGAGGTCTACGAGACGGAGGCGGAGATCTACCTGATCATGGAGTATGTGCAGGGAGGGGACCTTTTTGATGCCATCGTTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | AGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTCTTTCTTGTCTGAGTaGCTGTTGGGCCTCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLDRCPRQDYGICSATFLSFLSE*LLGLLS Trigger: ACTGAGGAGGCCCAACAGCAACTCAGACAAGAAAGA...CAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | CAGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTCCTCTGATCTCTTTCTaGTCTGAGTTGCTGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QAGQMSQAGLWHLLCNLLPLISF*SELLLG Trigger: GCCCAACAGCAACTCAGACAAGAAAGAGATCAGAGG...AAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACCCCACTTGGATGATGTaGAAGAGCTCGTCTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRIMASALQPSCADSGSDPTWMM*KSSSWS Trigger: GGACCAAGACGAGCTCTTCAACATCATCCAAGTGGG...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 90 bp | GTCGTGCATGTGGACGAGGGCCTTACACAAGTCTGTGATCATAACTaGAGCCTCGGGCTCTGGAAACTTCACATTTTCAACGATGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: VVHVDEGLTQVCDHN*SLGLWKLHIFNDGI Trigger: GATGCCATCGTTGAAAATGTGAAGTTTCCAGAGCCCGAGGCTGCAGTTATGATCACAGACTTGTGTAAGGCCCTCGTCCACATGCACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | AGGGCAAGAGCCCGGTTCTTAGGATACAGCTCCTCCATGGCCAACTaGATACTCTTCAATGTCAGCGGCTCTTTGCCCATAGCTATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RARARFLGYSSSMAN*ILFNVSGSLPIAMK Trigger: TTTCATAGCTATGGGCAAAGAGCCGCTGACATTGAAGAGTATCCAGTTGGCCATGGAGGAGCTGTATCCTAAGAACCGGGCTCTTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACCTTCCTTTCAGAAGCTaGCTGGGAAGTCTGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRIMASALQPSCADSGSDLPFRS*LGSLLL Trigger: GAGAAGCAGACTTCCCAGCAAGCTTCTGAAAGGAAG...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACGATGTTTCTCTCCACTaGCATGAGTCTCCTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRIMASALQPSCADSGSDDVSLH*HESPPE Trigger: CTCAGGAGGAGACTCATGCAAGTGGAGAGAAACATC...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTGCTGACTCTGGAAGTGACAATGTCAGCGGCTCTTaGCCCATAGCTATGAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRIMASALQPSCADSGSDNVSGS*PIAMKA Trigger: TGCTTTCATAGCTATGGGCAAAGAGCCGCTGACATT...GTCACTTCCAGAGTCAGCACAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | AGGCTGGACAGATGTCCCAGGCAGGATTATGGCATCTGCTCTGCAACCTTCTTGTTTCTCACCAGATCTTaGGCAGCATCAGAAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLDRCPRQDYGICSATFLFLTRS*AASEML Trigger: CAACATTTCTGATGCTGCCAAAGATCTGGTGAGAAA...CAAGAAGGTTGCAGAGCAGATGCCATAATCCTGCCTGGGACATCTGTCCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | AAGCACACTCCTGTAGCCTACCATGGATGTGAATACAAGGAGAAAACAGAATCTTTCACGGTGGCAAAGTaGCCATCCCCAATGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KHTPVAYHGCEYKEKTESFTVAK*PSPMTP Trigger: TGGGGTCATTGGGGATGGCAACTTTGCCACCGTGAA...AGATTCTGTTTTCTCCTTGTATTCACATCCATGGTAGGCTACAGGAGTGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 90 bp | AGACCTCGTGCAGTTTCACAATGTTGGGATGAGAGAGACTCTGGATaGTTAAAATCTCACTGTCGACAATGTCCTCCTTACCCTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RPRAVSQCWDERDSG*LKSHCRQCPPYPSA Trigger: AGCTGAAGGGTAAGGAGGACATTGTCGACAGTGAGATTTTAATCATCCAGAGTCTCTCTCATCCCAACATTGTGAAACTGCACGAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 90 bp | CAGGCCGTAACCTTTCTCAGAAAGAATTTCAGGAGCTACATATGTTaGCGTCCCACACACAGTAAATATAGGCCTCACCACATATTTGGC | + |
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Preference number: 5 (lower is better) Translates to: QAVTFLRKNFRSYIC*RPTHSKYRPHHIFG Trigger: GCCAAATATGTGGTGAGGCCTATATTTACTGTGTGTGGGACGCCAACATATGTAGCTCCTGAAATTCTTTCTGAGAAAGGTTACGGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS-3UTR CAA 90 bp | TCAACATTAGAACATTGCTTTCAAACACTCTTTAAAATATGCCAGGTGGCTCTTGTTGAAGAGCTCGTCTaGGTCCCTCTCAGGACTTCG | + |
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Preference number: 5 (lower is better) Translates to: STLEHCFQTLFKICQVALVEELV*VPLRTS Trigger: CGAAGTCCTGAGAGGGACCAAGACGAGCTCTTCAAC...AAGAGCCACCTGGCATATTTTAAAGAGTGTTTGAAAGCAATGTTCTAATGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 72 bp | GGGCTGTGCTCTGCGCGGACTGAGTGGAGGCTGCTCTaGGGGCTGAACAGCGGCATGACGGCACCACGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GLCSARTEWRLL*GLNSGMTAPRG Trigger: GCCACGTGGTGCCGTCATGCCGCTGTTCAGCCCTCAGAGCAGCCTCCACTCAGTCCGCGCAGAGCACAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | GGGGCTGCCCACCCAGCTTCACCACCGTCACCACCCTaGGCTTCAGTGGGCTGTGCTCTGCGCGGACTGAGT | + |
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Preference number: 6 (lower is better) Translates to: GAAHPASPPSPP*ASVGCALRGLS Trigger: ACTCAGTCCGCGCAGAGCACAGCCCACTGAAGCCCAGGGTGGTGACGGTGGTGAAGCTGGGTGGGCAGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 72 bp | CACCCTGGGCTTCAGTGGGCTGTGCTCTGCGCGGACTaGGTGGAGGCTGCTCTGAGGGCTGAACAGCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: HPGLQWAVLCAD*VEAALRAEQRH Trigger: ATGCCGCTGTTCAGCCCTCAGAGCAGCCTCCACTCAGTCCGCGCAGAGCACAGCCCACTGAAGCCCAGGGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | CTCCGGAGCCAGGCGGCATGCTTGCTCCTGCATGTGTaGCGGTCCTCTCTCCTCATGTCTATCGGCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRSQAACLLLHV*RSSLLMSIGPS Trigger: GGAGGGGCCGATAGACATGAGGAGAGAGGACCGGCACACATGCAGGAGCAAGCATGCCGCCTGGCTCCGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | GCTCTGAGGGCTGAACAGCGGCATGACGGCACCACGTaGCCCCAGAACTGGCTTCTCCAGAGGTCCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: ALRAEQRHDGTT*PQNWLLQRSSS Trigger: GGACGAGGACCTCTGGAGAAGCCAGTTCTGGGGCCACGTGGTGCCGTCATGCCGCTGTTCAGCCCTCAGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | AATCCCTCTTCTGAGCTCTCCCCAGGTCCAGCTCACTaGTTCCCAGCGGGCACGGCTCCCTCTGCAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: NPSSELSPGPAH*FPAGTAPSAGP Trigger: TGGGCCTGCAGAGGGAGCCGTGCCCGCTGGGAACCAGTGAGCTGGACCTGGGGAGAGCTCAGAAGAGGGATT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 72 bp | TCGGCCTGCTGCTCTCTCCGGAGCCAGGCGGCATGCTaGCTCCTGCATGTGTGCCGGTCCTCTCTCCTCATG | + |
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Preference number: 6 (lower is better) Translates to: SACCSLRSQAAC*LLHVCRSSLLM Trigger: CATGAGGAGAGAGGACCGGCACACATGCAGGAGCAAGCATGCCGCCTGGCTCCGGAGAGAGCAGCAGGCCGA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 90 bp | TGTGGGGGTTCGGCCTGCTGCTCTCTCCGGAGCCAGGCGGCATGCTaGCTCCTGCATGTGTGCCGGTCCTCTCTCCTCATGTCTATCGGC | + |
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Preference number: 6 (lower is better) Translates to: CGGSACCSLRSQAAC*LLHVCRSSLLMSIG Trigger: GCCGATAGACATGAGGAGAGAGGACCGGCACACATGCAGGAGCAAGCATGCCGCCTGGCTCCGGAGAGAGCAGCAGGCCGAACCCCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 72 bp | ATAGGAGCTGCTCAAAGGTCTGCACTGAGCGCCGGTTaGGGAGCAGGGTGGCCTTACGGAGGGGCTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: IGAAQRSALSAG*GAGWPYGGAAH Trigger: GTGGGCAGCCCCTCCGTAAGGCCACCCTGCTCCTCAACCGGCGCTCAGTGCAGACCTTTGAGCAGCTCCTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | GCCCTCCTCTCTCCTAAGCCGCCTGGCTTCTTCTCGTaGTCTGCTTGCTTCTCCTCCCCTCGGGTTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALLSPKPPGFFS*SACFSSPRVLG Trigger: CCCCAGAACCCGAGGGGAGGAGAAGCAAGCAGAGCACGAGAAGAAGCCAGGCGGCTTAGGAGAGAGGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 72 bp | GATAGGAGCTGCTCAAAGGTCTGCACTGAGCGCCGGTaGAGGAGCAGGGTGGCCTTACGGAGGGGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: DRSCSKVCTERR*RSRVALRRGCP Trigger: TGGGCAGCCCCTCCGTAAGGCCACCCTGCTCCTCAACCGGCGCTCAGTGCAGACCTTTGAGCAGCTCCTATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 90 bp | GAGATGTCTGATAGGAGCTGCTCAAAGGTCTGCACTGAGCGCCGGTaGAGGAGCAGGGTGGCCTTACGGAGGGGCTGCCCACCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: EMSDRSCSKVCTERR*RSRVALRRGCPPSF Trigger: GAAGCTGGGTGGGCAGCCCCTCCGTAAGGCCACCCTGCTCCTCAACCGGCGCTCAGTGCAGACCTTTGAGCAGCTCCTATCAGACATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | GCTGCTCTCTCCGGAGCCAGGCGGCATGCTTGCTCCTaGATGTGTGCCGGTCCTCTCTCCTCATGTCTATCG | + |
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Preference number: 6 (lower is better) Translates to: AALSGARRHACS*MCAGPLSSCLS Trigger: CGATAGACATGAGGAGAGAGGACCGGCACACATGCAGGAGCAAGCATGCCGCCTGGCTCCGGAGAGAGCAGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | TCTCCTAAGCCGCCTGGCTTCTTCTCGTGCTCTGCTTaGTTCTCCTCCCCTCGGGTTCTGGGGAGCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SPKPPGFFSCSA*FSSPRVLGSCG Trigger: CCCACAGCTCCCCAGAACCCGAGGGGAGGAGAAGCAAGCAGAGCACGAGAAGAAGCCAGGCGGCTTAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | CTTAAGCATTTCAGAGAATGGTCACATGGGCCTCGGTaGCCCGGAATGGGAGGCGCAGGGCGACTGGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LKHFREWSHGPR*PGMGGAGRLGA Trigger: GGCACCCAGTCGCCCTGCGCCTCCCATTCCGGGCCACCGAGGCCCATGTGACCATTCTCTGAAATGCTTAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | TCTCCTCATGTCTATCGGCCCCTCCTCTACAGCTGGTaGCCCTTCCACGAGGTCCTTCTGGGCCTTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SPHVYRPLLYSW*PFHEVLLGLGC Trigger: GCACCCAAGGCCCAGAAGGACCTCGTGGAAGGGCCACCAGCTGTAGAGGAGGGGCCGATAGACATGAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | TCCAGCTCACTGGTTCCCAGCGGGCACGGCTCCCTCTaGAGGCCCAACTGCAGCTCTCTTTCTCTCTTACAC | + |
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Preference number: 6 (lower is better) Translates to: SSSLVPSGHGSL*RPNCSSLSLLH Trigger: GTGTAAGAGAGAAAGAGAGCTGCAGTTGGGCCTGCAGAGGGAGCCGTGCCCGCTGGGAACCAGTGAGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 72 bp | GACCCCACCTATGTCATAGTGCTTCTCCACATCCGCTaGGATGATGCCCTTGGGCCTCGGCTTCCGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: DPTYVIVLLHIR*DDALGPRLPAT Trigger: AGTGGCCGGAAGCCGAGGCCCAAGGGCATCATCTCAGCGGATGTGGAGAAGCACTATGACATAGGTGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | GGGAAGCCCAAGGCTTCGGAGATGTCTGATAGGAGCTaGTCAAAGGTCTGCACTGAGCGCCGGTTGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GKPKASEMSDRS*SKVCTERRLRS Trigger: GCTCCTCAACCGGCGCTCAGTGCAGACCTTTGAGCAGCTCCTATCAGACATCTCCGAAGCCTTGGGCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 72 bp | TCCTGTTTCCCTCTTACCCACTTCTGGGCCCTCGCCTaGTCTTCTGGGGCCAGCACTGTGGAAGTCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SCFPLTHFWALA*SSGASTVEVLP Trigger: GGGCAAGACTTCCACAGTGCTGGCCCCAGAAGACAAGGCGAGGGCCCAGAAGTGGGTAAGAGGGAAACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 72 bp | CTCTTGGTCCTCACCAACTTCTCGGAATCCCTCTTCTaGGCTCTCCCCAGGTCCAGCTCACTGGTTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLVLTNFSESLF*ALPRSSSLVPS Trigger: GCTGGGAACCAGTGAGCTGGACCTGGGGAGAGCTCAGAAGAGGGATTCCGAGAAGTTGGTGAGGACCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | GCTTCGGAGATGTCTGATAGGAGCTGCTCAAAGGTCTaGACTGAGCGCCGGTTGAGGAGCAGGGTGGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: ASEMSDRSCSKV*TERRLRSRVAL Trigger: TAAGGCCACCCTGCTCCTCAACCGGCGCTCAGTGCAGACCTTTGAGCAGCTCCTATCAGACATCTCCGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 72 bp | CGGAAGAAGTCAGACACACTCTTCACCTCCCTGCCCTaGAGGGTGAACAGCTTCCGCACACGGTCGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RKKSDTLFTSLP*RVNSFRTRSFF Trigger: GAAGAACGACCGTGTGCGGAAGCTGTTCACCCTCAAGGGCAGGGAGGTGAAGAGTGTGTCTGACTTCTTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 72 bp | TTGTCTTCTGGGGCCAGCACTGTGGAAGTCTTGCCCTaGTGCCTAGAGACTGCCTTACTCTCCATTTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: LSSGASTVEVLP*CLETALLSISA Trigger: CGCGGAAATGGAGAGTAAGGCAGTCTCTAGGCATCAGGGCAAGACTTCCACAGTGCTGGCCCCAGAAGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | GGGGACTCCTCCTTCTGTGAGTTCCCTGTGTTGGTATaGCCAACCATCTCAATCCAGGGATGCTGTAGGACC | + |
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Preference number: 6 (lower is better) Translates to: GDSSFCEFPVLV*PTISIQGCCRT Trigger: GGTCCTACAGCATCCCTGGATTGAGATGGTTGGGCATACCAACACAGGGAACTCACAGAAGGAGGAGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | GACTGCCTTACTCTCCATTTCCGCGCTATAGCTTCCTaGCTCCCCACAGCGGTGACTTCCTTTCAGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: DCLTLHFRAIAS*LPTAVTSFQKL Trigger: AAGCTTCTGAAAGGAAGTCACCGCTGTGGGGAGGCAGGAAGCTATAGCGCGGAAATGGAGAGTAAGGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | CAGCACTGTGGAAGTCTTGCCCTGATGCCTAGAGACTaGCTTACTCTCCATTTCCGCGCTATAGCTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QHCGSLALMPRD*LTLHFRAIASC Trigger: GCAGGAAGCTATAGCGCGGAAATGGAGAGTAAGGCAGTCTCTAGGCATCAGGGCAAGACTTCCACAGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | GGGACTTGTCAATCATCTTCATGGCGTAAGCCTGCTTaGTCTCTCGGTGCCTGCATTCCTTCACGGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: GTCQSSSWRKPA*SLGACIPSRWQ Trigger: TTGCCACCGTGAAGGAATGCAGGCACCGAGAGACCAAGCAGGCTTACGCCATGAAGATGATTGACAAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 72 bp | GGAGAGAGGAACTCAAACTGGCCCACTTGGATGATGTaGAAGAGCTCGTCTTGGTCCCTCTCAGGACTTCGG | + |
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Preference number: 6 (lower is better) Translates to: GERNSNWPTWMM*KSSSWSLSGLR Trigger: CCGAAGTCCTGAGAGGGACCAAGACGAGCTCTTCAACATCATCCAAGTGGGCCAGTTTGAGTTCCTCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 72 bp | CTGTTGGGGGACTCCTCCTTCTGTGAGTTCCCTGTGTaGGTATGCCCAACCATCTCAATCCAGGGATGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LLGDSSFCEFPV*VCPTISIQGCC Trigger: ACAGCATCCCTGGATTGAGATGGTTGGGCATACCAACACAGGGAACTCACAGAAGGAGGAGTCCCCCAACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 72 bp | TGCATTCCTTCACGGTGGCAAAGTTGCCATCCCCAATaGCCCCACCTATGTCATAGTGCTTCTCCACATCCG | + |
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Preference number: 6 (lower is better) Translates to: CIPSRWQSCHPQ*PHLCHSASPHP Trigger: CGGATGTGGAGAAGCACTATGACATAGGTGGGGTCATTGGGGATGGCAACTTTGCCACCGTGAAGGAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | TCTGGTTTCACGTCCCGGTGGACGATATTCTTGTCGTaGATGTGGACGAGGGCCTTACACAAGTCTGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: SGFTSRWTIFLS*MWTRALHKSVI Trigger: GATCACAGACTTGTGTAAGGCCCTCGTCCACATGCACGACAAGAATATCGTCCACCGGGACGTGAAACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | GCCCGGTTCTTAGGATACAGCTCCTCCATGGCCAACTaGATACTCTTCAATGTCAGCGGCTCTTTGCCCATA | + |
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Preference number: 6 (lower is better) Translates to: ARFLGYSSSMAN*ILFNVSGSLPI Trigger: TATGGGCAAAGAGCCGCTGACATTGAAGAGTATCCAGTTGGCCATGGAGGAGCTGTATCCTAAGAACCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | CCTTACCCTTCAGCTGGGACTTGTCAATCATCTTCATaGCGTAAGCCTGCTTGGTCTCTCGGTGCCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: PYPSAGTCQSSS*RKPAWSLGACI Trigger: AATGCAGGCACCGAGAGACCAAGCAGGCTTACGCCATGAAGATGATTGACAAGTCCCAGCTGAAGGGTAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | TGTTGGGGGACTCCTCCTTCTGTGAGTTCCCTGTGTTaGTATGCCCAACCATCTCAATCCAGGGATGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: CWGTPPSVSSLC*YAQPSQSRDAV Trigger: TACAGCATCCCTGGATTGAGATGGTTGGGCATACCAACACAGGGAACTCACAGAAGGAGGAGTCCCCCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 90 bp | AGCTCCTCCATGGCCAACTGGATACTCTTCAATGTCAGCGGCTCTTaGCCCATAGCTATGAAAGCATCACCCTCCCGGAAGAAGTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSMANWILFNVSGS*PIAMKASPSRKKSD Trigger: GTCTGACTTCTTCCGGGAGGGTGATGCTTTCATAGCTATGGGCAAAGAGCCGCTGACATTGAAGAGTATCCAGTTGGCCATGGAGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 72 bp | ATGGCCAACTGGATACTCTTCAATGTCAGCGGCTCTTaGCCCATAGCTATGAAAGCATCACCCTCCCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: MANWILFNVSGS*PIAMKASPSRK Trigger: CTTCCGGGAGGGTGATGCTTTCATAGCTATGGGCAAAGAGCCGCTGACATTGAAGAGTATCCAGTTGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS GCA 72 bp | GTGGACGAGGGCCTTACACAAGTCTGTGATCATAACTaGAGCCTCGGGCTCTGGAAACTTCACATTTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: VDEGLTQVCDHN*SLGLWKLHIFN Trigger: GTTGAAAATGTGAAGTTTCCAGAGCCCGAGGCTGCAGTTATGATCACAGACTTGTGTAAGGCCCTCGTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | TTCACGTCCCGGTGGACGATATTCTTGTCGTGCATGTaGACGAGGGCCTTACACAAGTCTGTGATCATAACT | + |
|
Preference number: 6 (lower is better) Translates to: FTSRWTIFLSCM*TRALHKSVIIT Trigger: AGTTATGATCACAGACTTGTGTAAGGCCCTCGTCCACATGCACGACAAGAATATCGTCCACCGGGACGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 90 bp | TATGTTGGCGTCCCACACACAGTAAATATAGGCCTCACCACATATTaGGCCAAGCCAAAATCAGCCAGCTTCAAGGTGATAGACTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: YVGVPHTVNIGLTTY*AKPKSASFKVIDLS Trigger: AGACAAGTCTATCACCTTGAAGCTGGCTGATTTTGGCTTGGCCAAATATGTGGTGAGGCCTATATTTACTGTGTGTGGGACGCCAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CAA 72 bp | GTCCCACACACAGTAAATATAGGCCTCACCACATATTaGGCCAAGCCAAAATCAGCCAGCTTCAAGGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: VPHTVNIGLTTY*AKPKSASFKVI Trigger: TATCACCTTGAAGCTGGCTGATTTTGGCTTGGCCAAATATGTGGTGAGGCCTATATTTACTGTGTGTGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS CCA 72 bp | ACACAAGTCTGTGATCATAACTGCAGCCTCGGGCTCTaGAAACTTCACATTTTCAACGATGGCATCAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TQVCDHNCSLGL*KLHIFNDGIKK Trigger: CTTTTTGATGCCATCGTTGAAAATGTGAAGTTTCCAGAGCCCGAGGCTGCAGTTATGATCACAGACTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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| CDS TCA 72 bp | GCAGTTTCACAATGTTGGGATGAGAGAGACTCTGGATaGTTAAAATCTCACTGTCGACAATGTCCTCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: AVSQCWDERDSG*LKSHCRQCPPY Trigger: GTAAGGAGGACATTGTCGACAGTGAGATTTTAATCATCCAGAGTCTCTCTCATCCCAACATTGTGAAACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111879.5 |
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