Pregenerated sensors for DCK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029366Ensembl transcript IDs: ENSMUST00000031311.10
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACTCACTGCCCTGATGCTAAGAAAAATCTACCTCCAGACTCCCTaGTGTAAGAGATTCACACCTGGTTTATTTAAAACTGTGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: PLTALMLRKIYLQTP*CKRFTPGLFKTVEG Trigger: TCCTTCCACAGTTTTAAATAAACCAGGTGTGAATCTCTTACAGCAGGGAGTCTGGAGGTAGATTTTTCTTAGCATCAGGGCAGTGAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR CCA 90 bp | ATTAAAGATGAAAAGATTTATGAAGTAATTATACCATTACCAAACTaGGAAGAGTTTAGCCTCCTCCTCTACAAACACAGCACGGACACA | + |
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Preference number: 1 (lower is better) Translates to: IKDEKIYEVIIPLPN*EEFSLLLYKHSTDT Trigger: TGTGTCCGTGCTGTGTTTGTAGAGGAGGAGGCTAAACTCTTCCCAGTTTGGTAATGGTATAATTACTTCATAAATCTTTTCATCTTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGGGCTGGGCGGGGCTGAACAGCCCGCCTAGGCTTCTCAGTGTCTCACCTGAAGGCAGAGAAGGCTaGCCTGTTAGAACAGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: RRGWAGLNSPPRLLSVSPEGREG*PVRTVY Trigger: ATAAACTGTTCTAACAGGCCAGCCTTCTCTGCCTTC...AGGTGAGACACTGAGAAGCCTAGGCGGGCTGTTCAGCCCCGCCCAGCCCCGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGGGCTGGGCGGGGCTGAACAGCCCGCCTAGGCTTCTCAGTGTCTCACCTTTAGAACAAAAGGGCTaGGGACAGTTCTGTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: RRGWAGLNSPPRLLSVSPLEQKG*GQFCRG Trigger: ACCTCTACAGAACTGTCCCCAGCCCTTTTGTTCTAA...AGGTGAGACACTGAGAAGCCTAGGCGGGCTGTTCAGCCCCGCCCAGCCCCGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR-3UTR TCA 90 bp | CCACAGCACTCTCAGCAGAAATGTGACTTAAATCCCAAGTCAGCAGACTGCCTTGAATGGCCTACATGGTaGGTTCCAGGACAGCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: PQHSQQKCDLNPKSADCLEWPTW*VPGQLG Trigger: CCCTAGCTGTCCTGGAACTCACCATGTAGGCCATTC...AAGGCAGTCTGCTGACTTGGGATTTAAGTCACATTTCTGCTGAGAGTGCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR-3UTR TCA 90 bp | CCAAACTGGGAAGAGTTTAGCCTCCTCCTCTACAAACACAGCACGGACACAGTATTAACCCACTCAGGATaGCAAGTGAGAAGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PNWEEFSLLLYKHSTDTVLTHSG*QVRRQR Trigger: TCTCTGCCTTCTCACTTGTCATCCTGAGTGGGTTAA...TACTGTGTCCGTGCTGTGTTTGTAGAGGAGGAGGCTAAACTCTTCCCAGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCCTGATGCTAAGAAAAATCTACCTCCAGACTCCCTGCTGTAAGAGATTCGGCAGTACACAAAACTaGAGGAAGTATCCGGAAACG | + |
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Preference number: 2 (lower is better) Translates to: TALMLRKIYLQTPCCKRFGSTQN*RKYPET Trigger: CGTTTCCGGATACTTCCTGCAGTTTTGTGTACTGCC...GAATCTCTTACAGCAGGGAGTCTGGAGGTAGATTTTTCTTAGCATCAGGGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACGAAGCAAAGACACAATaGAAACATGTTAACCCACTC | + |
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Preference number: 2 (lower is better) Translates to: WLQSPTLPKGPGRKPSKHEAKTQ*KHVNPL Trigger: GAGTGGGTTAACATGTTTTCATTGTGTCTTTGCTTC...GTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACAGTTTATCCACTCACTaGCCTGATGCTAAGAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: WLQSPTLPKGPGRKPSKHSLSTH*PDAKKN Trigger: ATTTTTCTTAGCATCAGGGCAGTGAGTGGATAAACT...GTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGCCCTGATGCTAAGAAAAATCTACCTCCAGACTCCCTGCTGTAAGAGATTCATGAATATCAAGCAATaGCAGTACACAAAACTGCAG | + |
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Preference number: 2 (lower is better) Translates to: TALMLRKIYLQTPCCKRFMNIKQ*QYTKLQ Trigger: CTGCAGTTTTGTGTACTGCCATTGCTTGATATTCAT...GAATCTCTTACAGCAGGGAGTCTGGAGGTAGATTTTTCTTAGCATCAGGGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR TCA 72 bp | TGTCTGCCAGGTGATGGAGGCGGGGCTGGGCGGGGCTaGACAGCCCGCCTAGGCTTCTCAGTGTCTCACCTC | + |
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Preference number: 3 (lower is better) Translates to: CLPGDGGGAGRG*TARLGFSVSHL Trigger: GAGGTGAGACACTGAGAAGCCTAGGCGGGCTGTTCAGCCCCGCCCAGCCCCGCCTCCATCACCTGGCAGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR TCA 72 bp | AAGCACAGTGTGACCACAGCACTCTCAGCAGAAATGTaGCTTAAATCCCAAGTCAGCAGACTGCCTTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: KHSVTTALSAEM*LKSQVSRLPSN Trigger: GTTAGAAGGCAGTCTGCTGACTTGGGATTTAAGTCACATTTCTGCTGAGAGTGCTGTGGTCACACTGTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR CCA 72 bp | CTAAAGAGAGACCACTCATTATCAACTCAGGGCCCATaGGGAAAAATGGAAAACCTTGGCATGTTCTATCCT | + |
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Preference number: 3 (lower is better) Translates to: LKRDHSLSTQGP*GKMENLGMFYP Trigger: AGGATAGAACATGCCAAGGTTTTCCATTTTTCCCCATGGGCCCTGAGTTGATAATGAGTGGTCTCTCTTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR GCA 72 bp | GCCCTGATGCTAAGAAAAATCTACCTCCAGACTCCCTaGTGTAAGAGATTCACACCTGGTTTATTTAAAACT | + |
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Preference number: 3 (lower is better) Translates to: ALMLRKIYLQTP*CKRFTPGLFKT Trigger: AGTTTTAAATAAACCAGGTGTGAATCTCTTACAGCAGGGAGTCTGGAGGTAGATTTTTCTTAGCATCAGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR CCA 72 bp | GCTGTAAGAGATTCACACCTGGTTTATTTAAAACTGTaGAAGGAAGACCGGGAGGGACACAAGTTTTACATA | + |
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Preference number: 3 (lower is better) Translates to: AVRDSHLVYLKL*KEDREGHKFYI Trigger: TATGTAAAACTTGTGTCCCTCCCGGTCTTCCTTCCACAGTTTTAAATAAACCAGGTGTGAATCTCTTACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| 3UTR CCA 72 bp | GAAAAGATTTATGAAGTAATTATACCATTACCAAACTaGGAAGAGTTTAGCCTCCTCCTCTACAAACACAGC | + |
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Preference number: 3 (lower is better) Translates to: EKIYEVIIPLPN*EEFSLLLYKHS Trigger: GCTGTGTTTGTAGAGGAGGAGGCTAAACTCTTCCCAGTTTGGTAATGGTATAATTACTTCATAAATCTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR GCA 90 bp | AGGCGGGGCTGGGCGGGGCTGAACAGCCCGCCTAGGCTTCTCAGTGTCTCACCTGAGTGCTCTGCACGTTaGACCACCTGGCCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RRGWAGLNSPPRLLSVSPECSAR*TTWPQA Trigger: AGCCTGTGGCCAGGTGGTGCAACGTGCAGAGCACTC...AGGTGAGACACTGAGAAGCCTAGGCGGGCTGTTCAGCCCCGCCCAGCCCCGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR TCA 90 bp | AGGCGGGGCTGGGCGGGGCTGAACAGCCCGCCTAGGCTTCTCAGTGTCTCACCTTACTCAGAAATTCTTTaGCCTTTTCAACCAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RRGWAGLNSPPRLLSVSPYSEIL*PFQPGF Trigger: AAAGCCTGGTTGAAAAGGTCAAAGAATTTCTGAGTA...AGGTGAGACACTGAGAAGCCTAGGCGGGCTGTTCAGCCCCGCCCAGCCCCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CCA 90 bp | GCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACTTGGGTCCCCTCGGAGCTaGTCGAGGGAGAAGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ASISNTTKGTRKETKQTLGSPRS*SREKGR Trigger: TCTGCCCTTCTCCCTCGACCAGCTCCGAGGGGACCC...AAGTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR TCA 90 bp | GCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACTTCGATGGAGATCTTCTTaGTGCGGGTCCCCTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ASISNTTKGTRKETKQTLRWRSS*CGSPRS Trigger: GCTCCGAGGGGACCCGCATCAAGAAGATCTCCATCG...AAGTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR TCA 90 bp | CCAAACTGGGAAGAGTTTAGCCTCCTCCTCTACAAACACAGCACGGACACAGTAGTTTTCAGAGTCCGATaGAGGAGCCAGCTTTCATGT | + |
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Preference number: 4 (lower is better) Translates to: PNWEEFSLLLYKHSTDTVVFRVR*RSQLSC Trigger: ACATGAAAGCTGGCTCCTTCATCGGACTCTGAAAAC...TACTGTGTCCGTGCTGTGTTTGTAGAGGAGGAGGCTAAACTCTTCCCAGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CCA 90 bp | ACTGCCCTGATGCTAAGAAAAATCTACCTCCAGACTCCCTGCTGTAAGAGATTCAGGCTTTGGCCAAACTaGCTGTTCATCCAGTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: TALMLRKIYLQTPCCKRFRLWPN*LFIQSC Trigger: GCACGACTGGATGAACAGCCAGTTTGGCCAAAGCCT...GAATCTCTTACAGCAGGGAGTCTGGAGGTAGATTTTTCTTAGCATCAGGGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR TCA 90 bp | ACTGCCCTGATGCTAAGAAAAATCTACCTCCAGACTCCCTGCTGTAAGAGATTCGCTGAGACAGGCATATaGCTGGAAGGTGAAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: TALMLRKIYLQTPCCKRFAETGI*LEGERP Trigger: TGGTCTTTCACCTTCCAGTCATATGCCTGTCTCAGC...GAATCTCTTACAGCAGGGAGTCTGGAGGTAGATTTTTCTTAGCATCAGGGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR TCA 90 bp | TGGCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACCAGTCGTGCCAGTCTTaGTATATGGTCCACTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: WLQSPTLPKGPGRKPSKHQSCQS*YMVHSV Trigger: AACAGAGTGGACCATATATCAAGACTGGCACGACTG...GTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR TCA 90 bp | TCACACCTGGTTTATTTAAAACTGTGGAAGGAAGACCGGGAGGGACACAAGTTTTCCTCAAATTCCTCTTaGGTGCTCTGCACGTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SHLVYLKLWKEDREGHKFSSNSS*VLCTLH Trigger: GTGCAACGTGCAGAGCACTCAAGAGGAATTTGAGGA...AAACTTGTGTCCCTCCCGGTCTTCCTTCCACAGTTTTAAATAAACCAGGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CCA 90 bp | TGGCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACTCCAATTCAAGGCTTTaGCCAAACTGGCTGTTCATC | + |
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Preference number: 4 (lower is better) Translates to: WLQSPTLPKGPGRKPSKHSNSRL*PNWLFI Trigger: GATGAACAGCCAGTTTGGCCAAAGCCTTGAATTGGA...GTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR TCA 90 bp | CCCTGCTGTAAGAGATTCACACCTGGTTTATTTAAAACTGTGGAAGGAAGACCGCATATGACTGGAAGGTaGAAGACCACCGTTCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: PCCKRFTPGLFKTVEGRPHMTGR*KTTVQV Trigger: AACCTGAACGGTGGTCTTTCACCTTCCAGTCATATG...CGGTCTTCCTTCCACAGTTTTAAATAAACCAGGTGTGAATCTCTTACAGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR TCA 90 bp | TCACACCTGGTTTATTTAAAACTGTGGAAGGAAGACCGGGAGGGACACAAGTTTGATATTCACAAACGTTaGCTTCCCAGCAGCGATGTT | + |
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Preference number: 4 (lower is better) Translates to: SHLVYLKLWKEDREGHKFDIHKR*LPSSDV Trigger: AACATCGCTGCTGGGAAGTCAACGTTTGTGAATATC...AAACTTGTGTCCCTCCCGGTCTTCCTTCCACAGTTTTAAATAAACCAGGTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR GCA 90 bp | ACTGCCCTGATGCTAAGAAAAATCTACCTCCAGACTCCCTGCTGTAAGAGATTCCAATCCTCAGAGGCTTaGTTTAGGATATTCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: TALMLRKIYLQTPCCKRFQSSEA*FRIFTN Trigger: GTTTGTGAATATCCTAAAGCAAGCCTCTGAGGATTG...GAATCTCTTACAGCAGGGAGTCTGGAGGTAGATTTTTCTTAGCATCAGGGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CCA 90 bp | CCCTGCTGTAAGAGATTCACACCTGGTTTATTTAAAACTGTGGAAGGAAGACCGGCAGATAATCAAAGCTaGTTTTCAGAGTCCGATGAA | + |
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Preference number: 4 (lower is better) Translates to: PCCKRFTPGLFKTVEGRPADNQS*FSESDE Trigger: TTCATCGGACTCTGAAAACCAGCTTTGATTATCTGC...CGGTCTTCCTTCCACAGTTTTAAATAAACCAGGTGTGAATCTCTTACAGCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR GCA 90 bp | GCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACTTACTCTGTTTCATTCATaGAGTCAGATTCGTACAAAT | + |
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Preference number: 4 (lower is better) Translates to: ASISNTTKGTRKETKQTLTLFHS*SQIRTN Trigger: ATTTGTACGAATCTGACTGCATGAATGAAACAGAGT...AAGTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR TCA 90 bp | AGACTTTTGTATGAATATCAAGCAATGGCAGTACACAAAACTGCAGGAAGTATCTTCTCATACATCATTTaGAGAACATTTCCACCGCTC | + |
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Preference number: 4 (lower is better) Translates to: RLLYEYQAMAVHKTAGSIFSYII*RTFPPL Trigger: GAGCGGTGGAAATGTTCTTCAAATGATGTATGAGAA...GATACTTCCTGCAGTTTTGTGTACTGCCATTGCTTGATATTCATACAAAAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS TCA 90 bp | ACGTTGACTTCCCAGCAGCGATGTTCCCCTCGATGGAGATCTTCTTaGTGCGGGTCCCCTCGGAGCTGGTCGAGGGAGAAGGGCAGAACC | + |
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Preference number: 5 (lower is better) Translates to: TLTSQQRCSPRWRSS*CGSPRSWSREKGRT Trigger: GGTTCTGCCCTTCTCCCTCGACCAGCTCCGAGGGGACCCGCATCAAGAAGATCTCCATCGAGGGGAACATCGCTGCTGGGAAGTCAACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS GCA 90 bp | GAGACGTTGTCAATTCCTCAAATTCCTCTTGAGTGCTCTGCACGTTaGACCACCTGGCCACAGGCTCGGGAACCACTTCCCAATCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: ETLSIPQIPLECSAR*TTWPQAREPLPNPQ Trigger: CTGAGGATTGGGAAGTGGTTCCCGAGCCTGTGGCCAGGTGGTGCAACGTGCAGAGCACTCAAGAGGAATTTGAGGAATTGACAACGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CCA 90 bp | TCAATTCCTCAAATTCCTCTTGAGTGCTCTGCACGTTGCACCACCTaGCCACAGGCTCGGGAACCACTTCCCAATCCTCAGAGGCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: SIPQIPLECSARCTT*PQAREPLPNPQRLA Trigger: AGCAAGCCTCTGAGGATTGGGAAGTGGTTCCCGAGCCTGTGGCCAGGTGGTGCAACGTGCAGAGCACTCAAGAGGAATTTGAGGAATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS GCA 90 bp | CACCTGGCCACAGGCTCGGGAACCACTTCCCAATCCTCAGAGGCTTaGTTTAGGATATTCACAAACGTTGACTTCCCAGCAGCGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: HLATGSGTTSQSSEA*FRIFTNVDFPAAMF Trigger: GAACATCGCTGCTGGGAAGTCAACGTTTGTGAATATCCTAAAGCAAGCCTCTGAGGATTGGGAAGTGGTTCCCGAGCCTGTGGCCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CCA 90 bp | ACAGGTTTCTCTGCATCTTTGAGCTTGCCATTGAGAGAGGCTAGCTaGGCTCGGATCCGGCTGAGACAGGCATATGACTGGAAGGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: TGFSASLSLPLREAS*ARIRLRQAYDWKVK Trigger: TTTCACCTTCCAGTCATATGCCTGTCTCAGCCGGATCCGAGCCCAGCTAGCCTCTCTCAATGGCAAGCTCAAAGATGCAGAGAAACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | ACTGCCCTGATGCTAAGAAAAATCTACCTCCAGACTCCCTGCTGTAAGAGATTCTCGATGGAGATCTTCTaGATGCGGGTCCCCTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: TALMLRKIYLQTPCCKRFSMEIF*MRVPSE Trigger: CTCCGAGGGGACCCGCATCAAGAAGATCTCCATCGA...GAATCTCTTACAGCAGGGAGTCTGGAGGTAGATTTTTCTTAGCATCAGGGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | TGGCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACTCTTTGAGCTTGCCATaGAGAGAGGCTAGCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: WLQSPTLPKGPGRKPSKHSLSLP*REASWA Trigger: AGCCCAGCTAGCCTCTCTCAATGGCAAGCTCAAAGA...GTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | CCAAACTGGGAAGAGTTTAGCCTCCTCCTCTACAAACACAGCACGGACACAGTACCAGTCGTGCCAGTCTaGATATATGGTCCACTCTGT | + |
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Preference number: 5 (lower is better) Translates to: PNWEEFSLLLYKHSTDTVPVVPV*IYGPLC Trigger: ACAGAGTGGACCATATATCAAGACTGGCACGACTGG...TACTGTGTCCGTGCTGTGTTTGTAGAGGAGGAGGCTAAACTCTTCCCAGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | TGGCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACGGATATTCACAAACGTaGACTTCCCAGCAGCGATGT | + |
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Preference number: 5 (lower is better) Translates to: WLQSPTLPKGPGRKPSKHGYSQT*TSQQRC Trigger: ACATCGCTGCTGGGAAGTCAACGTTTGTGAATATCC...GTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | TGGCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACTTCCTCAAATTCCTCTaGAGTGCTCTGCACGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: WLQSPTLPKGPGRKPSKHFLKFL*SALHVA Trigger: TGCAACGTGCAGAGCACTCAAGAGGAATTTGAGGAA...GTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS TCA 90 bp | TCAAGGCTTTGGCCAAACTGGCTGTTCATCCAGTCGTGCCAGTCTTaGTATATGGTCCACTCTGTTTCATTCATGCAGTCAGATTCGTAC | + |
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Preference number: 5 (lower is better) Translates to: SRLWPNWLFIQSCQS*YMVHSVSFMQSDSY Trigger: GTACGAATCTGACTGCATGAATGAAACAGAGTGGACCATATATCAAGACTGGCACGACTGGATGAACAGCCAGTTTGGCCAAAGCCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | GCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACTTGGTTTCTCTGCATCTTaGAGCTTGCCATTGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: ASISNTTKGTRKETKQTLGFSAS*SLPLRE Trigger: CTCTCTCAATGGCAAGCTCAAAGATGCAGAGAAACC...AAGTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | TGGCTTCAATCTCCAACACTACCAAAGGGACCAGGAAGGAAACCAAGCAAACACGTACTCAGAAATTCTTaGACCTTTTCAACCAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: WLQSPTLPKGPGRKPSKHVLRNS*TFSTRL Trigger: AAGCCTGGTTGAAAAGGTCAAAGAATTTCTGAGTAC...GTGTTTGCTTGGTTTCCTTCCTGGTCCCTTTGGTAGTGTTGGAGATTGAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | AGACTTTTGTATGAATATCAAGCAATGGCAGTACACAAAACTGCAGGAAGTATCTCTGCATCTTTGAGCTaGCCATTGAGAGAGGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: RLLYEYQAMAVHKTAGSISASLS*PLREAS Trigger: GCTAGCCTCTCTCAATGGCAAGCTCAAAGATGCAGA...GATACTTCCTGCAGTTTTGTGTACTGCCATTGCTTGATATTCATACAAAAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | AGACTTTTGTATGAATATCAAGCAATGGCAGTACACAAAACTGCAGGAAGTATCTTTCTCATACATCATTaGAAGAACATTTCCACCGCT | + |
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Preference number: 5 (lower is better) Translates to: RLLYEYQAMAVHKTAGSIFLIHH*KNISTA Trigger: AGCGGTGGAAATGTTCTTCAAATGATGTATGAGAAA...GATACTTCCTGCAGTTTTGTGTACTGCCATTGCTTGATATTCATACAAAAGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS-3UTR CAA 90 bp | AGACTTTTGTATGAATATCAAGCAATGGCAGTACACAAAACTGCAGGAAGTATCACCAGGCTTTCGTGTTaGTCTTTAAAGTCTTCATTA | + |
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Preference number: 5 (lower is better) Translates to: RLLYEYQAMAVHKTAGSITRLSC*SLKSSL Trigger: TAATGAAGACTTTAAAGACAAACACGAAAGCCTGGT...GATACTTCCTGCAGTTTTGTGTACTGCCATTGCTTGATATTCATACAAAAGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS TCA 72 bp | TCCCAGCAGCGATGTTCCCCTCGATGGAGATCTTCTTaGTGCGGGTCCCCTCGGAGCTGGTCGAGGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SQQRCSPRWRSS*CGSPRSWSREK Trigger: CTTCTCCCTCGACCAGCTCCGAGGGGACCCGCATCAAGAAGATCTCCATCGAGGGGAACATCGCTGCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 72 bp | TTCCCAGCAGCGATGTTCCCCTCGATGGAGATCTTCTaGATGCGGGTCCCCTCGGAGCTGGTCGAGGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: FPAAMFPSMEIF*MRVPSELVEGE Trigger: TTCTCCCTCGACCAGCTCCGAGGGGACCCGCATCAAGAAGATCTCCATCGAGGGGAACATCGCTGCTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 90 bp | AACGTTGACTTCCCAGCAGCGATGTTCCCCTCGATGGAGATCTTCTaGATGCGGGTCCCCTCGGAGCTGGTCGAGGGAGAAGGGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: NVDFPAAMFPSMEIF*MRVPSELVEGEGQN Trigger: GTTCTGCCCTTCTCCCTCGACCAGCTCCGAGGGGACCCGCATCAAGAAGATCTCCATCGAGGGGAACATCGCTGCTGGGAAGTCAACGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CCA 72 bp | CAAATTCCTCTTGAGTGCTCTGCACGTTGCACCACCTaGCCACAGGCTCGGGAACCACTTCCCAATCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QIPLECSARCTT*PQAREPLPNPQ Trigger: CTGAGGATTGGGAAGTGGTTCCCGAGCCTGTGGCCAGGTGGTGCAACGTGCAGAGCACTCAAGAGGAATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CCA 72 bp | TCTGCATCTTTGAGCTTGCCATTGAGAGAGGCTAGCTaGGCTCGGATCCGGCTGAGACAGGCATATGACTGG | + |
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Preference number: 6 (lower is better) Translates to: SASLSLPLREAS*ARIRLRQAYDW Trigger: CCAGTCATATGCCTGTCTCAGCCGGATCCGAGCCCAGCTAGCCTCTCTCAATGGCAAGCTCAAAGATGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS GCA 72 bp | TCTGAGACGTTGTCAATTCCTCAAATTCCTCTTGAGTaGTCTGCACGTTGCACCACCTGGCCACAGGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SETLSIPQIPLE*SARCTTWPQAR Trigger: CCGAGCCTGTGGCCAGGTGGTGCAACGTGCAGAGCACTCAAGAGGAATTTGAGGAATTGACAACGTCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 90 bp | ATTTCCACCGCTCTTCTGAGACGTTGTCAATTCCTCAAATTCCTCTaGAGTGCTCTGCACGTTGCACCACCTGGCCACAGGCTCGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ISTALLRRCQFLKFL*SALHVAPPGHRLGN Trigger: GTTCCCGAGCCTGTGGCCAGGTGGTGCAACGTGCAGAGCACTCAAGAGGAATTTGAGGAATTGACAACGTCTCAGAAGAGCGGTGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS GCA 72 bp | ACAGGCTCGGGAACCACTTCCCAATCCTCAGAGGCTTaGTTTAGGATATTCACAAACGTTGACTTCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TGSGTTSQSSEA*FRIFTNVDFPA Trigger: TGCTGGGAAGTCAACGTTTGTGAATATCCTAAAGCAAGCCTCTGAGGATTGGGAAGTGGTTCCCGAGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 72 bp | AATAATACAGGTTTCTCTGCATCTTTGAGCTTGCCATaGAGAGAGGCTAGCTGGGCTCGGATCCGGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: NNTGFSASLSLP*REASWARIRLR Trigger: TCTCAGCCGGATCCGAGCCCAGCTAGCCTCTCTCAATGGCAAGCTCAAAGATGCAGAGAAACCTGTATTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 72 bp | AATCCTCAGAGGCTTGCTTTAGGATATTCACAAACGTaGACTTCCCAGCAGCGATGTTCCCCTCGATGGAGA | + |
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Preference number: 6 (lower is better) Translates to: NPQRLALGYSQT*TSQQRCSPRWR Trigger: TCTCCATCGAGGGGAACATCGCTGCTGGGAAGTCAACGTTTGTGAATATCCTAAAGCAAGCCTCTGAGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS TCA 72 bp | TGGCCAAACTGGCTGTTCATCCAGTCGTGCCAGTCTTaGTATATGGTCCACTCTGTTTCATTCATGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: WPNWLFIQSCQS*YMVHSVSFMQS Trigger: TGACTGCATGAATGAAACAGAGTGGACCATATATCAAGACTGGCACGACTGGATGAACAGCCAGTTTGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 72 bp | TTGGCCAAACTGGCTGTTCATCCAGTCGTGCCAGTCTaGATATATGGTCCACTCTGTTTCATTCATGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LAKLAVHPVVPV*IYGPLCFIHAV Trigger: GACTGCATGAATGAAACAGAGTGGACCATATATCAAGACTGGCACGACTGGATGAACAGCCAGTTTGGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 72 bp | GTCTTCATTAACATCCAGTGTGAGGACGGGCACCTCTaGCAGATAATCAAAGCTGGTTTTCAGAGTCCGATG | + |
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Preference number: 6 (lower is better) Translates to: VFINIQCEDGHL*QIIKAGFQSPM Trigger: CATCGGACTCTGAAAACCAGCTTTGATTATCTGCAAGAGGTGCCCGTCCTCACACTGGATGTTAATGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 90 bp | TTCAAGGCTTTGGCCAAACTGGCTGTTCATCCAGTCGTGCCAGTCTaGATATATGGTCCACTCTGTTTCATTCATGCAGTCAGATTCGTA | + |
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Preference number: 6 (lower is better) Translates to: FKALAKLAVHPVVPV*IYGPLCFIHAVRFV Trigger: TACGAATCTGACTGCATGAATGAAACAGAGTGGACCATATATCAAGACTGGCACGACTGGATGAACAGCCAGTTTGGCCAAAGCCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 90 bp | CTCGGGAGTAGCTCGAAGATAGATTATTCCATCCAATTCAAGGCTTaGGCCAAACTGGCTGTTCATCCAGTCGTGCCAGTCTTGATATAT | + |
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Preference number: 6 (lower is better) Translates to: LGSSSKIDYSIQFKA*AKLAVHPVVPVLIY Trigger: ATATATCAAGACTGGCACGACTGGATGAACAGCCAGTTTGGCCAAAGCCTTGAATTGGATGGAATAATCTATCTTCGAGCTACTCCCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 90 bp | GTCTTTAAAGTCTTCATTAACATCCAGTGTGAGGACGGGCACCTCTaGCAGATAATCAAAGCTGGTTTTCAGAGTCCGATGAAGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VFKVFINIQCEDGHL*QIIKAGFQSPMKEP Trigger: TGGCTCCTTCATCGGACTCTGAAAACCAGCTTTGATTATCTGCAAGAGGTGCCCGTCCTCACACTGGATGTTAATGAAGACTTTAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 90 bp | TCTCATACATCATTTGAAGAACATTTCCACCGCTCTTCTGAGACGTaGTCAATTCCTCAAATTCCTCTTGAGTGCTCTGCACGTTGCACC | + |
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Preference number: 6 (lower is better) Translates to: SHTSFEEHFHRSSET*SIPQIPLECSARCT Trigger: GGTGCAACGTGCAGAGCACTCAAGAGGAATTTGAGGAATTGACAACGTCTCAGAAGAGCGGTGGAAATGTTCTTCAAATGATGTATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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| CDS CAA 72 bp | TCATTTGAAGAACATTTCCACCGCTCTTCTGAGACGTaGTCAATTCCTCAAATTCCTCTTGAGTGCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SFEEHFHRSSET*SIPQIPLECSA Trigger: TGCAGAGCACTCAAGAGGAATTTGAGGAATTGACAACGTCTCAGAAGAGCGGTGGAAATGTTCTTCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031311.10 |
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