Pregenerated sensors for DCDC2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020633Ensembl transcript IDs: ENSMUST00000020963.8, ENSMUST00000185916.3, ENSMUST00000189735.7, ENSMUST00000221349.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCGGCAGCCCAATTCCTTACAATTGTTCAGTCGCAGCTGTGAATaGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCACACGGCAAGC | + |
|
Preference number: 1 (lower is better) Translates to: SRQPNSLQLFSRSCE*KSKDLAVTQSHTAS Trigger: GCTTGCCGTGTGAGACTGAGTAACTGCTAGATCCTTGGACTTCCATTCACAGCTGCGACTGAACAATTGTAAGGAATTGGGCTGCCGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| 3UTR TCA 90 bp | TTACAGTCGGCAGCCCAATTCCTTACAATTGTTCAGTCGCAGCTGTaGATGGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCACACGGC | + |
|
Preference number: 1 (lower is better) Translates to: LQSAAQFLTIVQSQL*MEVQGSSSYSVSHG Trigger: GCCGTGTGAGACTGAGTAACTGCTAGATCCTTGGACTTCCATTCACAGCTGCGACTGAACAATTGTAAGGAATTGGGCTGCCGACTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| 3UTR GCA 90 bp | GGAGATGATGGTTTGAAAGATGAGTATACAGGTATCTCTTGCCATTaGTGCTCTGGGGATGGTGGTCCCAAGAATAACTGTCCAGGAGAC | + |
|
Preference number: 1 (lower is better) Translates to: GDDGLKDEYTGISCH*CSGDGGPKNNCPGD Trigger: GTCTCCTGGACAGTTATTCTTGGGACCACCATCCCCAGAGCAGCAATGGCAAGAGATACCTGTATACTCATCTTTCAAACCATCATCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR CCA 90 bp | TGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATaGCTGATGTTTTGTCACCATAGTATTTGTTTCATGTGCTGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: CLRSCPVPDLFLFTA*LMFCHHSICFMCCP Trigger: GGGACAGCACATGAAACAAATACTATGGTGACAAAACATCAGCCATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| 3UTR TCA 90 bp | TACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATGGCTaGTGTTTTGTCACCATAGTATTTGTTTCATGTGCTGTCCCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: YGPVQFLTCFSSQHG*CFVTIVFVSCAVPE Trigger: CTCTGGGACAGCACATGAAACAAATACTATGGTGACAAAACATCAGCCATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| 3UTR GCA 90 bp | AGTCCCAGGAATGACTGTATATGTACCTCTTGTTGTTCAGGTTGTTaGTCTAGAGATGGTGGTCCCAAGGAGGACTGTACAGGTATCTTT | + |
|
Preference number: 1 (lower is better) Translates to: SPRNDCICTSCCSGC*SRDGGPKEDCTGIF Trigger: AAAGATACCTGTACAGTCCTCCTTGGGACCACCATCTCTAGAGCAACAACCTGAACAACAAGAGGTACATATACAGTCATTCCTGGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR GCA 90 bp | GGTCCCAAGGACAACTGTACAGGTACCGTTTGTTGTTCAAGTTTCTaGTCTAGGAATGGTAGTCCCAGGAATGACTGTATATGTACCTCT | + |
|
Preference number: 1 (lower is better) Translates to: GPKDNCTGTVCCSSF*SRNGSPRNDCICTS Trigger: AGAGGTACATATACAGTCATTCCTGGGACTACCATTCCTAGAGCAGAAACTTGAACAACAAACGGTACCTGTACAGTTGTCCTTGGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR GCA 90 bp | TCTTGGAATGGTGGTCCCAAAGATGACTATTTAAGAGATTCTCATTaGTCAGGTGGTTGTTCTAAGAACTGTCCCAAGGATGACTCTTTA | + |
|
Preference number: 1 (lower is better) Translates to: SWNGGPKDDYLRDSH*SGGCSKNCPKDDSL Trigger: TAAAGAGTCATCCTTGGGACAGTTCTTAGAACAACCACCTGAGCAATGAGAATCTCTTAAATAGTCATCTTTGGGACCACCATTCCAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR GCA 90 bp | TCTGGGGATGGTGCTCCCAAAAATGACTTTACAAAGGATTCTTGTTaGTCATGTCTTTGGTCTTCAGTTAATGATGACTCTTCTAGTGAT | + |
|
Preference number: 1 (lower is better) Translates to: SGDGAPKNDFTKDSC*SCLWSSVNDDSSSD Trigger: ATCACTAGAAGAGTCATCATTAACTGAAGACCAAAGACATGAGCAACAAGAATCCTTTGTAAAGTCATTTTTGGGAGCACCATCCCCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR CCA 90 bp | GCTCCCAAAAATGACTTTACAAAGGATTCTTGTTGCTCATGTCTTTaGTCTTCAGTTAATGATGACTCTTCTAGTGATTCTTGTCCTATT | + |
|
Preference number: 1 (lower is better) Translates to: APKNDFTKDSCCSCL*SSVNDDSSSDSCPI Trigger: AATAGGACAAGAATCACTAGAAGAGTCATCATTAACTGAAGACCAAAGACATGAGCAACAAGAATCCTTTGTAAAGTCATTTTTGGGAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTTGTTCAGGTTGTTGCTCTAGAGATGGTGGTCCCAAGGAGGACTGTACAGATTGATGGATCTCTCTaGACTTCTGCTTCTACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LVVQVVALEMVVPRRTVQIDGSL*TSASTW Trigger: CCAAGTAGAAGCAGAAGTTCAGAGAGATCCATCAAT...CTGTACAGTCCTCCTTGGGACCACCATCTCTAGAGCAACAACCTGAACAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR CAA 90 bp | GGAGCAAGAGCAAGAGCTAGACTCCCTTTTTCCAATGTCCTTATATaGTCTCCAGCAGAAGGTGTAGCTCAGATTAAAGGTGTGTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GARARARLPFSNVLI*SPAEGVAQIKGVFH Trigger: GTGGAACACACCTTTAATCTGAGCTACACCTTCTGCTGGAGACAATATAAGGACATTGGAAAAAGGGAGTCTAGCTCTTGCTCTTGCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATACAAAGGATTCTTGTTaGTCATGTCTTTGGTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: FSFAYGPVQFLTCFSSQHTKDSC*SCLWSS Trigger: TGAAGACCAAAGACATGAGCAACAAGAATCCTTTGT...ATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTCTTTGTTCTGGGGATGGTGCTCCCAAAAATGACTTTACAAAGGATTCTTGTATCTCTCTGAACTTCTaGTTCTACTTGGGTTTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: GLCSGDGAPKNDFTKDSCISLNF*FYLGFY Trigger: ATAGAAACCCAAGTAGAAGCAGAAGTTCAGAGAGAT...ACAAGAATCCTTTGTAAAGTCATTTTTGGGAGCACCATCCCCAGAACAAAGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTCCCAAAAATGACTTTACAAAGGATTCTTGTTGCTCATGTCTTTGGTCTTACTTCTGCTTCTACTTaGGTTTCTATCAGTACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VLPKMTLQRILVAHVFGLTSAST*VSISTG Trigger: ACCTGTACTGATAGAAACCCAAGTAGAAGCAGAAGT...AAGACCAAAGACATGAGCAACAAGAATCCTTTGTAAAGTCATTTTTGGGAGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTTTGTTATCTCAAGGATaGCTGTCATTGGGATCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSNFIFICLRSCPVPDLFLLSQG*LSLGSS Trigger: ACTAGATCCCAATGACAGTCATCCTTGAGATAACAA...AAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| 3UTR CCA 72 bp | AGAAACCTCATGTTGTTCAAGTTGTTGCTCTGGGGATaGTGGTCCCAAGGACAACTGTACAGGTACCGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RNLMLFKLLLWG*WSQGQLYRYRL Trigger: CAAACGGTACCTGTACAGTTGTCCTTGGGACCACCATCCCCAGAGCAACAACTTGAACAACATGAGGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGAGTATACAGGTATCTCTTGCCATTGCTGCTCTGGGGATGGTGGTCCCACTGTATATGTACCTCTaGTTGTTCAGGTTGTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KMSIQVSLAIAALGMVVPLYMYL*LFRLLL Trigger: GAGCAACAACCTGAACAACAAGAGGTACATATACAG...TGGGACCACCATCCCCAGAGCAGCAATGGCAAGAGATACCTGTATACTCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR TCA 72 bp | GCAGCCCAATTCCTTACAATTGTTCAGTCGCAGCTGTaGATGGAAGTCCAAGGATCTAGCAGTTACTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: AAQFLTIVQSQL*MEVQGSSSYSV Trigger: GACTGAGTAACTGCTAGATCCTTGGACTTCCATTCACAGCTGCGACTGAACAATTGTAAGGAATTGGGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCAGGTATCTCTTGCCATaGCTGCTCTGGGGATGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLILFSFAYGPVQFLTCFRYLLP*LLWGWW Trigger: CCACCATCCCCAGAGCAGCAATGGCAAGAGATACCT...GAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR GCA 72 bp | TTGAAAGATGAGTATACAGGTATCTCTTGCCATTGCTaGTCTGGGGATGGTGGTCCCAAGAATAACTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LKDEYTGISCHC*SGDGGPKNNCP Trigger: TGGACAGTTATTCTTGGGACCACCATCCCCAGAGCAGCAATGGCAAGAGATACCTGTATACTCATCTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR CCA 72 bp | CCCAATTCCTTACAATTGTTCAGTCGCAGCTGTGAATaGAAGTCCAAGGATCTAGCAGTTACTCAGTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PNSLQLFSRSCE*KSKDLAVTQSH Trigger: GTGAGACTGAGTAACTGCTAGATCCTTGGACTTCCATTCACAGCTGCGACTGAACAATTGTAAGGAATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| 3UTR GCA 72 bp | AATGACTGTATATGTACCTCTTGTTGTTCAGGTTGTTaGTCTAGAGATGGTGGTCCCAAGGAGGACTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: NDCICTSCCSGC*SRDGGPKEDCT Trigger: TGTACAGTCCTCCTTGGGACCACCATCTCTAGAGCAACAACCTGAACAACAAGAGGTACATATACAGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR TCA 72 bp | CTCAGGTCTTTGTTCTGGGGATGGTGCTCCCAAAAATaGCTTTACAAAGGATTCTTGTTGCTCATGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LRSLFWGWCSQK*LYKGFLLLMSL Trigger: CAAAGACATGAGCAACAAGAATCCTTTGTAAAGTCATTTTTGGGAGCACCATCCCCAGAACAAAGACCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR TCA 72 bp | TTCAAGTTGTTGCTCTGGGGATGGTGGTTCCAAGGATaGCTTTACAGAAACCTCATGTTGTTCAAGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FKLLLWGWWFQG*LYRNLMLFKLL Trigger: CAACAACTTGAACAACATGAGGTTTCTGTAAAGTCATCCTTGGAACCACCATCCCCAGAGCAACAACTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR GCA 72 bp | GGTGGTCCCAAAGATGACTATTTAAGAGATTCTCATTaGTCAGGTGGTTGTTCTAAGAACTGTCCCAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GGPKDDYLRDSH*SGGCSKNCPKD Trigger: ATCCTTGGGACAGTTCTTAGAACAACCACCTGAGCAATGAGAATCTCTTAAATAGTCATCTTTGGGACCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR TCA 72 bp | CAGAGTCACCTGTTTCTAAGATTGTTATCTCAAGGATaGCTGTCATTGGGATCTAGTTGCTTGGGTAGATAT | + |
|
Preference number: 3 (lower is better) Translates to: QSHLFLRLLSQG*LSLGSSCLGRY Trigger: ATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATCTTAGAAACAGGTGACTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| 3UTR CCA 72 bp | AATGACTTTACAAAGGATTCTTGTTGCTCATGTCTTTaGTCTTCAGTTAATGATGACTCTTCTAGTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: NDFTKDSCCSCL*SSVNDDSSSDS Trigger: AGAATCACTAGAAGAGTCATCATTAACTGAAGACCAAAGACATGAGCAACAAGAATCCTTTGTAAAGTCATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | TACTCAGTCTCACACGGCAAGCAGGCGAAGGAGCAAGAGCAAGAGCTAGACTCCACTTCCAGGGCTTCTTaGGCCTCCTTAGCCGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YSVSHGKQAKEQEQELDSTSRAS*ASLAGV Trigger: GACTCCGGCTAAGGAGGCCCAAGAAGCCCTGGAAGT...GGAGTCTAGCTCTTGCTCTTGCTCCTTCGCCTGCTTGCCGTGTGAGACTGAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR GCA 90 bp | CATGTTGTTCAAGTTGTTGCTCTGGGGATGGTGGTCCCAAGGACAACTGTACAGAAGGGCACCTCCACCTaGTCGGTCAGCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVVQVVALGMVVPRTTVQKGTST*SVSCSS Trigger: GCTGGAGCAGCTGACCGAGCAGGTGGAGGTGCCCTT...CTGTACAGTTGTCCTTGGGACCACCATCCCCAGAGCAACAACTTGAACAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR GCA 90 bp | ATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATGGCTGCTGCAGCCACGTACTTaGCACCGGTCTGCAGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ICLRSCPVPDLFLFTAWLLQPRT*HRSAAR Trigger: ACGCGCTGCAGACCGGTGGCAAGTACGTGGCTGCAG...CAGCCATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | TACTCAGTCTCACACGGCAAGCAGGCGAAGGAGCAAGAGCAAGAGCTAGACTCCCTCCACCTTCACCTCTaGGTCCTCCTTGACTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSVSHGKQAKEQEQELDSLHLHL*VLLDFQ Trigger: CTGGAAGTCAAGGAGGACCCAGAGGTGAAGGTGGAG...GGAGTCTAGCTCTTGCTCTTGCTCCTTCGCCTGCTTGCCGTGTGAGACTGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGTTGTTGCTCTGGGGATGGTGGTCCCAAGGACAACTGTACAGGTACCGCCACTTCCTTTTCCATaGCACTCTTCAGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQVVALGMVVPRTTVQVPPLPFP*HSSGQG Trigger: GCCCTGGCCTGAAGAGTGGCATGGAAAAGGAAGTGG...CGGTACCTGTACAGTTGTCCTTGGGACCACCATCCCCAGAGCAACAACTTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATGGCTGACTTCCAGGGCTTCTTaGGCCTCCTTAGCCGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ICLRSCPVPDLFLFTAWLTSRAS*ASLAGV Trigger: GACTCCGGCTAAGGAGGCCCAAGAAGCCCTGGAAGT...CAGCCATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATGGCTGTGGTGCCTGATCGACTaGCACCTCCACCTTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ICLRSCPVPDLFLFTAWLWCLID*HLHLHL Trigger: GAGGTGAAGGTGGAGGTGCCAGTCGATCAGGCACCA...CAGCCATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATCTGCAGCCACGTACTTaGCACCGGTCTGCAGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FSFAYGPVQFLTCFSSQHLQPRT*HRSAAR Trigger: ACGCGCTGCAGACCGGTGGCAAGTACGTGGCTGCAG...ATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATGGCTGCTCACTGGGGACCCATaGGGACTTCCAGTAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ICLRSCPVPDLFLFTAWLLTGDP*GLPVRN Trigger: ATTCCTTACTGGAAGTCCTCATGGGTCCCCAGTGAG...CAGCCATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGAAGCGCTCCCGGCCTaGAGCCACGTACTTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FIFICLRSCPVPDLFLFTEALPA*SHVLAT Trigger: GGTGGCAAGTACGTGGCTGCAGGCCGGGAGCGCTTC...TGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTGTTCAAGTTTCTGCTCTAGGAATGGTAGTCCCAGGAATGACTGTATAGAAGCGCTCCCGGCCTaGAGCCACGTACTTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VCCSSFCSRNGSPRNDCIEALPA*SHVLAT Trigger: GGTGGCAAGTACGTGGCTGCAGGCCGGGAGCGCTTC...TATACAGTCATTCCTGGGACTACCATTCCTAGAGCAGAAACTTGAACAACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | GAGTGCTACCCTCCAGCATCTCACTTGTGTGTAGATATGAATTGTATTAGTCAGCCTCTGGGTCCTCCTTaGCTTCCAGGGCTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ECYPPASHLCVDMNCISQPLGPP*LPGLLG Trigger: CCCAAGAAGCCCTGGAAGTCAAGGAGGACCCAGAGG...CTGACTAATACAATTCATATCTACACACAAGTGAGATGCTGGAGGGTAGCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR TCA 90 bp | GCAGAAGGTGTAGCTCAGATTAAAGGTGTGTTCCACCACACCTTTAATCCCAGACTCACTGGGGACCCATaGGGACTTCCAGTAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AEGVAQIKGVFHHTFNPRLTGDP*GLPVRN Trigger: ATTCCTTACTGGAAGTCCTCATGGGTCCCCAGTGAG...TCTGGGATTAAAGGTGTGGTGGAACACACCTTTAATCTGAGCTACACCTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGACACATGGGCTCAGTaGTGGAGACCAGGCGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIFICLRSCPVPDLFLFTDTWAQ*WRPGGG Trigger: ACCACCGCCTGGTCTCCAGCACTGAGCCCATGTGTC...TGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR GCA 90 bp | ATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATGGCTGTCTTGTTCAAGTTGTTaGTCTGGGGATGGTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICLRSCPVPDLFLFTAWLSCSSC*SGDGGS Trigger: GGAACCACCATCCCCAGAGCAACAACTTGAACAAGA...CAGCCATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CCA 90 bp | TTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATCTCCACCTTCACCTCTaGGTCCTCCTTGACTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSFAYGPVQFLTCFSSQHLHLHL*VLLDFQ Trigger: CTGGAAGTCAAGGAGGACCCAGAGGTGAAGGTGGAG...ATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGATGACTTACAGTCGGCAGCCCAATTCCTTACAATTGTTCAGTCGCAGTGGTGCCTGATCGACTaGCACCTCCACCTTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FIDDLQSAAQFLTIVQSQWCLID*HLHLHL Trigger: GAGGTGAAGGTGGAGGTGCCAGTCGATCAGGCACCA...CTGCGACTGAACAATTGTAAGGAATTGGGCTGCCGACTGTAAGTCATCAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR GCA 90 bp | CATGTTGTTCAAGTTGTTGCTCTGGGGATGGTGGTCCCAAGGACAACTGTACAGGTCCTGCTCTGTATTTaGCATCTAGAAGGCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HVVQVVALGMVVPRTTVQVLLCI*HLEGTL Trigger: CAAAGTGCCTTCTAGATGGCAAATACAGAGCAGGAC...CTGTACAGTTGTCCTTGGGACCACCATCCCCAGAGCAACAACTTGAACAACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR GCA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTAAGACCTGGGGCCCCTaGAACTGGCCTGTGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: DCYLKDDCHWDLVAWVDIKTWGP*NWPVST Trigger: TGTCGACACAGGCCAGTTGCAGGGGCCCCAGGTCTT...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACATCTGCTGGACCTCACTaGGGACCCATGAGGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIFICLRSCPVPDLFLFTSAGPH*GPMRTS Trigger: GGAAGTCCTCATGGGTCCCCAGTGAGGTCCAGCAGA...TGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTTTGTTCTGGGGATGGTGCTCCCAAAAATGACTTTACAAAGGATTCTTGTCTCCACCTTCACCTCTaGGTCCTCCTTGACTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLCSGDGAPKNDFTKDSCLHLHL*VLLDFQ Trigger: CTGGAAGTCAAGGAGGACCCAGAGGTGAAGGTGGAG...ACAAGAATCCTTTGTAAAGTCATTTTTGGGAGCACCATCCCCAGAACAAAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCGCTGCAATGAAGACCTaGGGCCCCTGCAACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLILFSFAYGPVQFLTCFAAMKT*GPCNWP Trigger: AGGCCAGTTGCAGGGGCCCCAGGTCTTCATTGCAGC...GAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR TCA 90 bp | TTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCCTCTGGGTCCTCCTTaGCTTCCAGGGCTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSNFIFICLRSCPVPDLFPLGPP*LPGLLG Trigger: CCCAAGAAGCCCTGGAAGTCAAGGAGGACCCAGAGG...AAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | TATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTATCTCAACCTCTGGGTCCTCCTTaGCTTCCAGGGCTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLFHVLSQSHLFLRLLSQPLGPP*LPGLLG Trigger: CCCAAGAAGCCCTGGAAGTCAAGGAGGACCCAGAGG...TTGAGATAACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTGTTCAAGTTTCTGCTCTAGGAATGGTAGTCCCAGGAATGACTGTATAACACCAAGATGGTCTTaGCCGGTGTGGTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VCCSSFCSRNGSPRNDCITPRWS*PVWCPP Trigger: TGGTGGACACCACACCGGCCAAGACCATCTTGGTGT...TATACAGTCATTCCTGGGACTACCATTCCTAGAGCAGAAACTTGAACAACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGTTGTTCAAGTTTCTGCTCTAGGAATGGTAGTCCCAGGAATGACTGTATATGCGGTACACCAAGATaGTCTTGGCCGGTGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCCSSFCSRNGSPRNDCICGTPR*SWPVWC Trigger: ACACCACACCGGCCAAGACCATCTTGGTGTACCGCA...TATACAGTCATTCCTGGGACTACCATTCCTAGAGCAGAAACTTGAACAACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTGTTCAGGTTGTTGCTCTAGAGATGGTGGTCCCAAGGAGGACTGTACAGACTTTGATATCACAATaGACCACCGGCTTGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVVQVVALEMVVPRRTVQTLISQ*TTGLIS Trigger: GGAAATCAAGCCGGTGGTCCATTGTGATATCAAAGT...CTGTACAGTCCTCCTTGGGACCACCATCTCTAGAGCAACAACCTGAACAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTGTGTTCCTTAAACTCGGAGATTCAATCTTCTGGAATCCATAGCCACTATCCTCCAAATCTCTGCTaGACCTCACTGGGGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KVCSLNSEIQSSGIHSHYPPNLC*TSLGTH Trigger: ATGGGTCCCCAGTGAGGTCCAGCAGAGATTTGGAGG...ATAGTGGCTATGGATTCCAGAAGATTGAATCTCCGAGTTTAAGGAACACACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR CCA 90 bp | ACCATAGTATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTACTTCCAGGGCTTCTTaGGCCTCCTTAGCCGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TIVFVSCAVPESPVSKIVTSRAS*ASLAGV Trigger: GACTCCGGCTAAGGAGGCCCAAGAAGCCCTGGAAGT...AACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATACTATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | GGATCCAAGGATGATTGCGTAGGGGATTCCTTTTTCTCAGGTCTTTGTTCTGGGTCTCGTCAATTTCTTTaGCAATTTCAGCTGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSKDDCVGDSFFSGLCSGSRQFL*QFQLVP Trigger: AGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGA...CCCAGAACAAAGACCTGAGAAAAAGGAATCCCCTACGCAATCATCCTTGGATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | GGATCCAAGGATGATTGCGTAGGGGATTCCTTTTTCTCAGGTCTTTGTTCTGGGTCTTGCAGAAGTTCTTaGGAGCTGCTTTCTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSKDDCVGDSFFSGLCSGSCRSS*ELLSVN Trigger: ATTGACAGAAAGCAGCTCTCAAGAACTTCTGCAAGA...CCCAGAACAAAGACCTGAGAAAAAGGAATCCCCTACGCAATCATCCTTGGATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGGTATCTCTTGCCATTaGTGCTCTGGGGATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIFICLRSCPVPDLFLFTGISCH*CSGDGG Trigger: ACCACCATCCCCAGAGCAGCAATGGCAAGAGATACC...TGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CCA 90 bp | TATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTATCTCAATGGTGCCTGATCGACTaGCACCTCCACCTTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLFHVLSQSHLFLRLLSQWCLID*HLHLHL Trigger: GAGGTGAAGGTGGAGGTGCCAGTCGATCAGGCACCA...TTGAGATAACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | AATTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTACATGGGCTCAGTGCTaGAGACCAGGCGGTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NCLILFSFAYGPVQFLTCTWAQC*RPGGGS Trigger: ACTACCACCGCCTGGTCTCCAGCACTGAGCCCATGT...ACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAATCAGTTCTTTGGGTTaGAGGCTCAGGACTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIFICLRSCPVPDLFLFTISSLG*RLRTRS Trigger: AGAGCGAGTCCTGAGCCTGCAACCCAAAGAACTGAT...TGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CCA 90 bp | TTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCCTCCAAATCTCTGCTaGACCTCACTGGGGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSNFIFICLRSCPVPDLFPPNLC*TSLGTH Trigger: ATGGGTCCCCAGTGAGGTCCAGCAGAGATTTGGAGG...AAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | AATTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTCCTCCAAATCTCTGCTaGACCTCACTGGGGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NCLILFSFAYGPVQFLTCPPNLC*TSLGTH Trigger: ATGGGTCCCCAGTGAGGTCCAGCAGAGATTTGGAGG...ACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGAGTATACAGGTATCTCTTGCCATTGCTGCTCTGGGGATGGTGGTCCCAGAGGTTCTTTTACTTTaGACTCCACTCTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KMSIQVSLAIAALGMVVPEVLLL*TPLFSL Trigger: CAAAGAAAAGAGTGGAGTCCAAAGTAAAAGAACCTC...TGGGACCACCATCCCCAGAGCAGCAATGGCAAGAGATACCTGTATACTCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR CAA 72 bp | CGCATTAGGAAGGAGTGCTACCCTCCAGCATCTCACTaGTGTGTAGATATGAATTGTATTAGTCAGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIRKECYPPASH*CVDMNCISQGS Trigger: AGAACCCTGACTAATACAATTCATATCTACACACAAGTGAGATGCTGGAGGGTAGCACTCCTTCCTAATGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR TCA 90 bp | TATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTATCTCAACTCACTGGGGACCCATaGGGACTTCCAGTAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLFHVLSQSHLFLRLLSQLTGDP*GLPVRN Trigger: ATTCCTTACTGGAAGTCCTCATGGGTCCCCAGTGAG...TTGAGATAACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTGATGACTTACAGTCGGCAGCCCAATTCCTTACAATTGTTCAGTCGCAGAATGAAGCAGGAATATaGATGCCACTCTTCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIDDLQSAAQFLTIVQSQNEAGI*MPLFRP Trigger: TGGCCTGAAGAGTGGCATGCATATTCCTGCTTCATT...CTGCGACTGAACAATTGTAAGGAATTGGGCTGCCGACTGTAAGTCATCAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR CCA 90 bp | AATTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTGTTGCTCTGGGGATaGTGGTCCCAAGGACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NCLILFSFAYGPVQFLTCLLLWG*WSQGQL Trigger: CAGTTGTCCTTGGGACCACCATCCCCAGAGCAACAA...ACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| 3UTR CAA 72 bp | GCAAGAGCTAGACTCCCTTTTTCCAATGTCCTTATATaGTCTCCAGCAGAAGGTGTAGCTCAGATTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARARLPFSNVLI*SPAEGVAQIKG Trigger: ACCTTTAATCTGAGCTACACCTTCTGCTGGAGACAATATAAGGACATTGGAAAAAGGGAGTCTAGCTCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR TCA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTTCATCGTTTTACACTTaGCGTGACACATGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DCYLKDDCHWDLVAWVDISSFYT*RDTWAQ Trigger: CTGAGCCCATGTGTCACGTCAAGTGTAAAACGATGA...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR GCA 90 bp | TATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTATCTCAATGTTGTTCAAGTTGTTaGTCTGGGGATGGTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YLFHVLSQSHLFLRLLSQCCSSC*SGDGGP Trigger: GGGACCACCATCCCCAGAGCAACAACTTGAACAACA...TTGAGATAACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGGTGTAGCTCAGATTAAAGGTGTGTTCCACCACACCTTTAATCCCAGAGAGGTTCTTTTACTTTaGACTCCACTCTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEGVAQIKGVFHHTFNPREVLLL*TPLFSL Trigger: CAAAGAAAAGAGTGGAGTCCAAAGTAAAAGAACCTC...TCTGGGATTAAAGGTGTGGTGGAACACACCTTTAATCTGAGCTACACCTTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR TCA 90 bp | TTTATTGATGACTTACAGTCGGCAGCCCAATTCCTTACAATTGTTCAGTCGCAGGTCTTGCAAATTCTTTaGGTCATCCAAAAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIDDLQSAAQFLTIVQSQVLQIL*VIQKMS Trigger: GGACATCTTTTGGATGACTCAAAGAATTTGCAAGAC...CTGCGACTGAACAATTGTAAGGAATTGGGCTGCCGACTGTAAGTCATCAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR TCA 90 bp | AAGGTGTGTTCCTTAAACTCGGAGATTCAATCTTCTGGAATCCATAGCCACTATTCTCGTCAATTTCTTTaGCAATTTCAGCTGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVCSLNSEIQSSGIHSHYSRQFL*QFQLVP Trigger: AGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGA...ATAGTGGCTATGGATTCCAGAAGATTGAATCTCCGAGTTTAAGGAACACACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR TCA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTCTTAAAAGACATTCGTaGATGGTCTCCCATGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DCYLKDDCHWDLVAWVDILKRHS*MVSHAT Trigger: AGTGGCATGGGAGACCATTCACGAATGTCTTTTAAG...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR TCA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTTGGTGGTTCCAAGGATaGCTTTACAGAAACCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DCYLKDDCHWDLVAWVDIWWFQG*LYRNLM Trigger: CATGAGGTTTCTGTAAAGTCATCCTTGGAACCACCA...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTGTTCAAGTTTCTGCTCTAGGAATGGTAGTCCCAGGAATGACTGTATATCACCTGCACCACTTTaGACTAAAAGTTCTGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: VCCSSFCSRNGSPRNDCISPAPL*TKSSVS Trigger: GGATACAGAACTTTTAGTTCAAAGTGGTGCAGGTGA...TATACAGTCATTCCTGGGACTACCATTCCTAGAGCAGAAACTTGAACAACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | GTTTGTTGTTCAAGTTTCTGCTCTAGGAATGGTAGTCCCAGGAATGACTGTATAGTCTTGCAAATTCTTTaGGTCATCCAAAAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCCSSFCSRNGSPRNDCIVLQIL*VIQKMS Trigger: GGACATCTTTTGGATGACTCAAAGAATTTGCAAGAC...TATACAGTCATTCCTGGGACTACCATTCCTAGAGCAGAAACTTGAACAACAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTTCTCGTCAATTTCTTTaGCAATTTCAGCTGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DCYLKDDCHWDLVAWVDISRQFL*QFQLVP Trigger: AGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGA...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTATTGATGGATCTCTCTaGACTTCTGCTTCTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCYLKDDCHWDLVAWVDIIDGSL*TSASTW Trigger: CCAAGTAGAAGCAGAAGTTCAGAGAGATCCATCAAT...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR GCA 90 bp | AATTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTGTCCTGCTCTGTATTTaGCATCTAGAAGGCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NCLILFSFAYGPVQFLTCVLLCI*HLEGTL Trigger: CAAAGTGCCTTCTAGATGGCAAATACAGAGCAGGAC...ACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTGTTGTTCAAGTTTCTaGTCTAGGAATGGTAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLILFSFAYGPVQFLTCFCCSSF*SRNGSP Trigger: GGGACTACCATTCCTAGAGCAGAAACTTGAACAACA...GAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CCA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTACTTTGATATCACAATaGACCACCGGCTTGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DCYLKDDCHWDLVAWVDITLISQ*TTGLIS Trigger: GGAAATCAAGCCGGTGGTCCATTGTGATATCAAAGT...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAACTTCTGCTTCTACTTaGGTTTCTATCAGTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIFICLRSCPVPDLFLFTTSAST*VSISTG Trigger: ACCTGTACTGATAGAAACCCAAGTAGAAGCAGAAGT...TGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR TCA 90 bp | GATGGTGCTCCCAAAAATGACTTTACAAAGGATTCTTGTTGCTCATGTCTTTGGCAACTTTCTCATCTTTaGAGGTTTTCTGGGAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: DGAPKNDFTKDSCCSCLWQLSHL*RFSGNY Trigger: ATAGTTCCCAGAAAACCTTCAAAGATGAGAAAGTTG...CCAAAGACATGAGCAACAAGAATCCTTTGTAAAGTCATTTTTGGGAGCACCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTGTCTTGCAAATTCTTTaGGTCATCCAAAAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DCYLKDDCHWDLVAWVDIVLQIL*VIQKMS Trigger: GGACATCTTTTGGATGACTCAAAGAATTTGCAAGAC...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTGGTGCTCCCAAAAATaGCTTTACAAAGGATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLILFSFAYGPVQFLTCFWCSQK*LYKGFL Trigger: CAAGAATCCTTTGTAAAGTCATTTTTGGGAGCACCA...GAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR GCA 90 bp | GTTTGTTGTTCAAGTTTCTGCTCTAGGAATGGTAGTCCCAGGAATGACTGTATAGAAGTTCTTGAGAGCTaGTTTCTGTCAATATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCCSSFCSRNGSPRNDCIEVLES*FLSISS Trigger: TGAAGATATTGACAGAAAGCAGCTCTCAAGAACTTC...TATACAGTCATTCCTGGGACTACCATTCCTAGAGCAGAAACTTGAACAACAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| 3UTR CAA 72 bp | CTTTTAAACTTTAAGTCCGGCCATCAAAATATGAGGTaGACAATTGTAATACCCTACTGGCATACCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNFKSGHQNMR*TIVIPYWHTSA Trigger: TGCTGAGGTATGCCAGTAGGGTATTACAATTGTCAACCTCATATTTTGATGGCCGGACTTAAAGTTTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCCAACTTTCTCATCTTTaGAGGTTTTCTGGGAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLILFSFAYGPVQFLTCFQLSHL*RFSGNY Trigger: ATAGTTCCCAGAAAACCTTCAAAGATGAGAAAGTTG...GAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR GCA 90 bp | ACCATAGTATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTATCTCTCTGAACTTCTaGTTCTACTTGGGTTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TIVFVSCAVPESPVSKIVISLNF*FYLGFY Trigger: ATAGAAACCCAAGTAGAAGCAGAAGTTCAGAGAGAT...AACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATACTATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR GCA 90 bp | ACCATAGTATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTACAAAGGATTCTTGTTaGTCATGTCTTTGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TIVFVSCAVPESPVSKIVTKDSC*SCLWSS Trigger: TGAAGACCAAAGACATGAGCAACAAGAATCCTTTGT...AACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATACTATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CCA 90 bp | TTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTGAGGTTCTTTTACTTTaGACTCCACTCTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSNFIFICLRSCPVPDLFEVLLL*TPLFSL Trigger: CAAAGAAAAGAGTGGAGTCCAAAGTAAAAGAACCTC...AAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS CCA 90 bp | CACCGGTCTGCAGCGCGTCCAGTCCGAGCACCGGGTGGCCGCGCGTaGGCGTGTAGAGCCTCCGCACACCGAAGGGCACCTCCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HRSAARPVRAPGGRA*ACRASAHRRAPPPA Trigger: AGCAGGTGGAGGTGCCCTTCGGTGTGCGGAGGCTCTACACGCCCACGCGCGGCCACCCGGTGCTCGGACTGGACGCGCTGCAGACCGGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS GCA 90 bp | TTCTTGAAGCGCTCCCGGCCTGCAGCCACGTACTTGCCACCGGTCTaGAGCGCGTCCAGTCCGAGCACCGGGTGGCCGCGCGTGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLKRSRPAATYLPPV*SASSPSTGWPRVGV Trigger: CACGCCCACGCGCGGCCACCCGGTGCTCGGACTGGACGCGCTGCAGACCGGTGGCAAGTACGTGGCTGCAGGCCGGGAGCGCTTCAAGAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS GCA 90 bp | GCCGGGAGAACACGAACTTGCGGCCCACATAGAACTGGTCCCCGTTaGGGTACACCAAGATGGTCTTGGCCGGTGTGGTGTCCACCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGRTRTCGPHRTGPR*GTPRWSWPVWCPPA Trigger: CGCTGGTGGACACCACACCGGCCAAGACCATCTTGGTGTACCGCAACGGGGACCAGTTCTATGTGGGCCGCAAGTTCGTGTTCTCCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS GCA 90 bp | GGGAACTATATGAATATAGTCCAGCTTCTTGAAGCGCTCCCGGCCTaGAGCCACGTACTTGCCACCGGTCTGCAGCGCGTCCAGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GNYMNIVQLLEALPA*SHVLATGLQRVQSE Trigger: CTCGGACTGGACGCGCTGCAGACCGGTGGCAAGTACGTGGCTGCAGGCCGGGAGCGCTTCAAGAAGCTGGACTATATTCATATAGTTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS CCA 90 bp | CGACATAGGCCCTCGACAGCAGGTCCAGGGCTACTATCAGTTCTTTaGGTTGCAGGCTCAGGACTCGCTCTCCTTTGCACCATGTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RHRPSTAGPGLLSVL*VAGSGLALLCTMLH Trigger: GTGCAACATGGTGCAAAGGAGAGCGAGTCCTGAGCCTGCAACCCAAAGAACTGATAGTAGCCCTGGACCTGCTGTCGAGGGCCTATGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS CCA 90 bp | AGGGCTGCTATCGCCTATCTCGTCAATTTCTTTGACAATTTCAGCTaGTGCCTGATCGACTGGCACCTCCACCTTCACCTCTGGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RAAIAYLVNFFDNFS*CLIDWHLHLHLWVL Trigger: GAGGACCCAGAGGTGAAGGTGGAGGTGCCAGTCGATCAGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGATAGGCGATAGCAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | CATGTTGTTCAAGTTGTTGCTCTGGGGATGGTGGTCCCAAGGACAACTGTACAGTACACCAAGATGGTCTaGGCCGGTGTGGTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HVVQVVALGMVVPRTTVQYTKMV*AGVVST Trigger: GGTGGACACCACACCGGCCAAGACCATCTTGGTGTA...CTGTACAGTTGTCCTTGGGACCACCATCCCCAGAGCAACAACTTGAACAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS TCA 90 bp | CACTCTTCAGGCCAGGGCTGCTATCGCCTATCTCGTCAATTTCTTTaGCAATTTCAGCTGGTGCCTGATCGACTGGCACCTCCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HSSGQGCYRLSRQFL*QFQLVPDRLAPPPS Trigger: TGAAGGTGGAGGTGCCAGTCGATCAGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGATAGGCGATAGCAGCCCTGGCCTGAAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS GCA 90 bp | GCTGCTATCGCCTATCTCGTCAATTTCTTTGACAATTTCAGCTGGTaGCTGATCGACTGGCACCTCCACCTTCACCTCTGGGTCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AAIAYLVNFFDNFSW*LIDWHLHLHLWVLL Trigger: AAGGAGGACCCAGAGGTGAAGGTGGAGGTGCCAGTCGATCAGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGATAGGCGATAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS GCA 90 bp | AGGCGTTGGAACCACCTCTTTATTCTTGCAGAAGTTCTTGAGAGCTaGAATGAAGACCTGGGGCCCCTGCAACTGGCCTGTGTCGACATA | + |
|
Preference number: 5 (lower is better) Translates to: RRWNHLFILAEVLES*NEDLGPLQLACVDI Trigger: TATGTCGACACAGGCCAGTTGCAGGGGCCCCAGGTCTTCATTGCAGCTCTCAAGAACTTCTGCAAGAATAAAGAGGTGGTTCCAACGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CAA 90 bp | CTTGTTGTTCAGGTTGTTGCTCTAGAGATGGTGGTCCCAAGGAGGACTGTACAGATCTCGTCAATTTCTTaGACAATTTCAGCTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVVQVVALEMVVPRRTVQISSIS*TISAGA Trigger: GGCACCAGCTGAAATTGTCAAAGAAATTGACGAGAT...CTGTACAGTCCTCCTTGGGACCACCATCTCTAGAGCAACAACCTGAACAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS GCA 90 bp | TTACTTTGGACTCCACTCTTTTCTTTGTTTGCGTGTATTTATCATTaGCTCCAAATCTCTGCTGGACCTCACTGGGGACCCATGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LLWTPLFSLFACIYH*LQISAGPHWGPMRT Trigger: AGTCCTCATGGGTCCCCAGTGAGGTCCAGCAGAGATTTGGAGGCAATGATAAATACACGCAAACAAAGAAAAGAGTGGAGTCCAAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS GCA 90 bp | CCATTTGTGAAAACGTTTATGTATCGGGATGTCCTGCTCTGTATTTaGCATCTAGAAGGCACTTTGATATCACAATGGACCACCGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PFVKTFMYRDVLLCI*HLEGTLISQWTTGL Trigger: CAAGCCGGTGGTCCATTGTGATATCAAAGTGCCTTCTAGATGGCAAATACAGAGCAGGACATCCCGATACATAAACGTTTTCACAAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATTGTCCTGCTCTGTATTaGCCATCTAGAAGGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSFAYGPVQFLTCFSSQHCPALY*PSRRHF Trigger: AAAGTGCCTTCTAGATGGCAAATACAGAGCAGGACA...ATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | GTTTGTTGTTCAAGTTTCTGCTCTAGGAATGGTAGTCCCAGGAATGACTGTATACAATGGACCACCGGCTaGATTTCCTTCAACTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCCSSFCSRNGSPRNDCIQWTTG*ISFNFL Trigger: GAGAAAGTTGAAGGAAATCAAGCCGGTGGTCCATTG...TATACAGTCATTCCTGGGACTACCATTCCTAGAGCAGAAACTTGAACAACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTTTGTTCTGGGGATGGTGCTCCCAAAAATGACTTTACAAAGGATTCTTGTCATCTAGAAGGCACTTaGATATCACAATGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: GLCSGDGAPKNDFTKDSCHLEGT*ISQWTT Trigger: GGTGGTCCATTGTGATATCAAAGTGCCTTCTAGATG...ACAAGAATCCTTTGTAAAGTCATTTTTGGGAGCACCATCCCCAGAACAAAGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGAGCTAGACTCCCTTTTTCCAATGTCCTTATATTGTCTCCAGCAGAAGATCTCGTCAATTTCTTaGACAATTTCAGCTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EQELDSLFPMSLYCLQQKISSIS*TISAGA Trigger: GGCACCAGCTGAAATTGTCAAAGAAATTGACGAGAT...CTTCTGCTGGAGACAATATAAGGACATTGGAAAAAGGGAGTCTAGCTCTTGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGATGAGTATACAGGTATCTCTTGCCATTGCTGCTCTGGGGATGGTGGTTCAACTTTCTCATCTTaGAAGGTTTTCTGGGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: LKDEYTGISCHCCSGDGGSTFSS*KVFWEL Trigger: TAGTTCCCAGAAAACCTTCAAAGATGAGAAAGTTGA...ACCACCATCCCCAGAGCAGCAATGGCAAGAGATACCTGTATACTCATCTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTCAATGGACCACCGGCTaGATTTCCTTCAACTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DCYLKDDCHWDLVAWVDIQWTTG*ISFNFL Trigger: GAGAAAGTTGAAGGAAATCAAGCCGGTGGTCCATTG...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | GCAGAAGGTGTAGCTCAGATTAAAGGTGTGTTCCACCACACCTTTAATCCCAGATGTCTTGCAAATTCTTaGAGTCATCCAAAAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: AEGVAQIKGVFHHTFNPRCLANS*SHPKDV Trigger: GACATCTTTTGGATGACTCAAAGAATTTGCAAGACA...TCTGGGATTAAAGGTGTGGTGGAACACACCTTTAATCTGAGCTACACCTTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR CAA 90 bp | GCAGAAGGTGTAGCTCAGATTAAAGGTGTGTTCCACCACACCTTTAATCCCAGAAGAGGTTCTTTTACTTaGGACTCCACTCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AEGVAQIKGVFHHTFNPRRGSFT*DSTLFF Trigger: AAAGAAAAGAGTGGAGTCCAAAGTAAAAGAACCTCT...TCTGGGATTAAAGGTGTGGTGGAACACACCTTTAATCTGAGCTACACCTTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189735.7 |
||
| CDS-3UTR CAA 90 bp | TATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTATCTCAAGCTACTATCAGTTCTTaGGGTTGCAGGCTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: YLFHVLSQSHLFLRLLSQATISS*GCRLRT Trigger: AGTCCTGAGCCTGCAACCCAAAGAACTGATAGTAGC...TTGAGATAACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACAGCATTCTGGAGATGATGGTTaGAAAGATGAGTATACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSFAYGPVQFLTCFSSQHSGDDG*KDEYTG Trigger: ACCTGTATACTCATCTTTCAAACCATCATCTCCAGA...ATGCTGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CAA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTTGTCCTGCTCTGTATTaGCCATCTAGAAGGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: DCYLKDDCHWDLVAWVDICPALY*PSRRHF Trigger: AAAGTGCCTTCTAGATGGCAAATACAGAGCAGGACA...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS TCA 90 bp | AGGGAAGACTTTTTCTCCAATCATGGCCAGCACGCTATTCCAATCTaGCAGGCTGAATTTGGGTATAATAACTTTTATAGGAGGGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: REDFFSNHGQHAIPI*QAEFGYNNFYRRDK Trigger: TTTATCCCTCCTATAAAAGTTATTATACCCAAATTCAGCCTGTCAGATTGGAATAGCGTGCTGGCCATGATTGGAGAAAAAGTCTTCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | AATTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTCATCTAGAAGGCACTTaGATATCACAATGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: NCLILFSFAYGPVQFLTCHLEGT*ISQWTT Trigger: GGTGGTCCATTGTGATATCAAAGTGCCTTCTAGATG...ACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | AATTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTTGCAGAAGTTCTaGAGAGCTGCAATGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: NCLILFSFAYGPVQFLTCFLQKF*RAAMKT Trigger: GGTCTTCATTGCAGCTCTCAAGAACTTCTGCAAGAA...ACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CAA 90 bp | GATTGTTATCTCAAGGATGACTGTCATTGGGATCTAGTTGCTTGGGTAGATATTACCACCTCTTTATTCTaGCAGAAGTTCTTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DCYLKDDCHWDLVAWVDITTSLF*QKFLRA Trigger: AGCTCTCAAGAACTTCTGCAAGAATAAAGAGGTGGT...AATATCTACCCAAGCAACTAGATCCCAATGACAGTCATCCTTGAGATAACAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAAAATGACTTTACAAAGGATTCTTGTTGCTCATGTCTTTGGTCTTCAGACCACCTCTTTATTCTaGCAGAAGTTCTTGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPKMTLQRILVAHVFGLQTTSLF*QKFLRA Trigger: AGCTCTCAAGAACTTCTGCAAGAATAAAGAGGTGGT...CTGAAGACCAAAGACATGAGCAACAAGAATCCTTTGTAAAGTCATTTTTGGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCAACTTCTGCTTCTACTaGGGTTTCTATCAGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLILFSFAYGPVQFLTCFNFCFY*GFYQYR Trigger: CCTGTACTGATAGAAACCCAAGTAGAAGCAGAAGTT...GAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAAAATGACTTTACAAAGGATTCTTGTTGCTCATGTCTTTGGTCTTCAGTTCTTGCAGAAGTTCTaGAGAGCTGCTTTCTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPKMTLQRILVAHVFGLQFLQKF*RAAFCQ Trigger: TTGACAGAAAGCAGCTCTCAAGAACTTCTGCAAGAA...CTGAAGACCAAAGACATGAGCAACAAGAATCCTTTGTAAAGTCATTTTTGGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTCTTCACATGTCTTGCAAATTCTTaGAGTCATCCAAAAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: FIFICLRSCPVPDLFLFTCLANS*SHPKDV Trigger: GACATCTTTTGGATGACTCAAAGAATTTGCAAGACA...TGTGAAGAGAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | GATGGTGCTCCCAAAAATGACTTTACAAAGGATTCTTGTTGCTCATGTCTTTGGAGAGGTTCTTTTACTTaGGACTCCACTCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DGAPKNDFTKDSCCSCLWRGSFT*DSTLFF Trigger: AAAGAAAAGAGTGGAGTCCAAAGTAAAAGAACCTCT...CCAAAGACATGAGCAACAAGAATCCTTTGTAAAGTCATTTTTGGGAGCACCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | AATTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTATCTCGTCAATTTCTTaGACAATTTCAGCTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NCLILFSFAYGPVQFLTCISSIS*TISAGA Trigger: GGCACCAGCTGAAATTGTCAAAGAAATTGACGAGAT...ACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTGTATATGTACCTCTaGTTGTTCAGGTTGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSNFIFICLRSCPVPDLFLYMYL*LFRLLL Trigger: GAGCAACAACCTGAACAACAAGAGGTACATATACAG...AAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CAA 90 bp | TATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTATCTCAATACAGAAACCTCATGTaGTTCAAGTTGTTGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YLFHVLSQSHLFLRLLSQYRNLM*FKLLLW Trigger: CCAGAGCAACAACTTGAACAACATGAGGTTTCTGTA...TTGAGATAACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCTGTCTTGCAAATTCTTaGAGTCATCCAAAAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: CLILFSFAYGPVQFLTCFCLANS*SHPKDV Trigger: GACATCTTTTGGATGACTCAAAGAATTTGCAAGACA...GAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTAATTTTATTTTCATTTGCCTACGGTCCTGTCCAGTTCCTGACTTGTTTCAGAGGTTCTTTTACTTaGGACTCCACTCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLILFSFAYGPVQFLTCFRGSFT*DSTLFF Trigger: AAAGAAAAGAGTGGAGTCCAAAGTAAAAGAACCTCT...GAAACAAGTCAGGAACTGGACAGGACCGTAGGCAAATGAAAATAAAATTAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS-3UTR CAA 90 bp | TATTTGTTTCATGTGCTGTCCCAGAGTCACCTGTTTCTAAGATTGTTATCTCAATCAACTTTCTCATCTTaGAAGGTTTTCTGGGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: YLFHVLSQSHLFLRLLSQSTFSS*KVFWEL Trigger: TAGTTCCCAGAAAACCTTCAAAGATGAGAAAGTTGA...TTGAGATAACAATCTTAGAAACAGGTGACTCTGGGACAGCACATGAAACAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS GCA 72 bp | CGCTCCCGGCCTGCAGCCACGTACTTGCCACCGGTCTaGAGCGCGTCCAGTCCGAGCACCGGGTGGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSRPAATYLPPV*SASSPSTGWPR Trigger: GCGCGGCCACCCGGTGCTCGGACTGGACGCGCTGCAGACCGGTGGCAAGTACGTGGCTGCAGGCCGGGAGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS CCA 72 bp | GCAGCGCGTCCAGTCCGAGCACCGGGTGGCCGCGCGTaGGCGTGTAGAGCCTCCGCACACCGAAGGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: AARPVRAPGGRA*ACRASAHRRAP Trigger: AGGTGCCCTTCGGTGTGCGGAGGCTCTACACGCCCACGCGCGGCCACCCGGTGCTCGGACTGGACGCGCTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS GCA 72 bp | CGCACACCGAAGGGCACCTCCACCTGCTCGGTCAGCTaGTCCAGCAGAGCCTCGAAGTTGGCTACGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RTPKGTSTCSVS*SSRASKLATRR Trigger: GCGCCGCGTAGCCAACTTCGAGGCTCTGCTGGAGCAGCTGACCGAGCAGGTGGAGGTGCCCTTCGGTGTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS CCA 72 bp | CCCCGTTGCGGTACACCAAGATGGTCTTGGCCGGTGTaGTGTCCACCAGCGCATAGGGCCCGCGCGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRCGTPRWSWPV*CPPAHRARACP Trigger: TGGGCACGCGCGGGCCCTATGCGCTGGTGGACACCACACCGGCCAAGACCATCTTGGTGTACCGCAACGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS CCA 72 bp | CCTGCTCGGTCAGCTGCTCCAGCAGAGCCTCGAAGTTaGCTACGCGGCGCCGGGAGAACACGAACTTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PARSAAPAEPRS*LRGAGRTRTCG Trigger: GCCGCAAGTTCGTGTTCTCCCGGCGCCGCGTAGCCAACTTCGAGGCTCTGCTGGAGCAGCTGACCGAGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS CAA 72 bp | AGCTTCTTGAAGCGCTCCCGGCCTGCAGCCACGTACTaGCCACCGGTCTGCAGCGCGTCCAGTCCGAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SFLKRSRPAATY*PPVCSASSPST Trigger: GGTGCTCGGACTGGACGCGCTGCAGACCGGTGGCAAGTACGTGGCTGCAGGCCGGGAGCGCTTCAAGAAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS CAA 72 bp | ACCTGCTCGGTCAGCTGCTCCAGCAGAGCCTCGAAGTaGGCTACGCGGCGCCGGGAGAACACGAACTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TCSVSCSSRASK*ATRRRENTNLR Trigger: CCGCAAGTTCGTGTTCTCCCGGCGCCGCGTAGCCAACTTCGAGGCTCTGCTGGAGCAGCTGACCGAGCAGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS CCA 72 bp | AGAACTGGTCCCCGTTGCGGTACACCAAGATGGTCTTaGCCGGTGTGGTGTCCACCAGCGCATAGGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RTGPRCGTPRWS*PVWCPPAHRAR Trigger: GCGGGCCCTATGCGCTGGTGGACACCACACCGGCCAAGACCATCTTGGTGTACCGCAACGGGGACCAGTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS GCA 72 bp | ATGAATATAGTCCAGCTTCTTGAAGCGCTCCCGGCCTaGAGCCACGTACTTGCCACCGGTCTGCAGCGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: MNIVQLLEALPA*SHVLATGLQRV Trigger: GACGCGCTGCAGACCGGTGGCAAGTACGTGGCTGCAGGCCGGGAGCGCTTCAAGAAGCTGGACTATATTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS CCA 72 bp | CCACATAGAACTGGTCCCCGTTGCGGTACACCAAGATaGTCTTGGCCGGTGTGGTGTCCACCAGCGCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHRTGPRCGTPR*SWPVWCPPAHR Trigger: CCTATGCGCTGGTGGACACCACACCGGCCAAGACCATCTTGGTGTACCGCAACGGGGACCAGTTCTATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS GCA 72 bp | ACACGAACTTGCGGCCCACATAGAACTGGTCCCCGTTaGGGTACACCAAGATGGTCTTGGCCGGTGTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TRTCGPHRTGPR*GTPRWSWPVWC Trigger: ACACCACACCGGCCAAGACCATCTTGGTGTACCGCAACGGGGACCAGTTCTATGTGGGCCGCAAGTTCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020963.8 ENSMUST00000221349.2 |
||
| CDS CCA 72 bp | CCCTCGACAGCAGGTCCAGGGCTACTATCAGTTCTTTaGGTTGCAGGCTCAGGACTCGCTCTCCTTTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PSTAGPGLLSVL*VAGSGLALLCT Trigger: GGTGCAAAGGAGAGCGAGTCCTGAGCCTGCAACCCAAAGAACTGATAGTAGCCCTGGACCTGCTGTCGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS CAA 72 bp | GCCCTCGACAGCAGGTCCAGGGCTACTATCAGTTCTTaGGGTTGCAGGCTCAGGACTCGCTCTCCTTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALDSRSRATISS*GCRLRTRSPLH Trigger: GTGCAAAGGAGAGCGAGTCCTGAGCCTGCAACCCAAAGAACTGATAGTAGCCCTGGACCTGCTGTCGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS CAA 90 bp | ATAGGCCCTCGACAGCAGGTCCAGGGCTACTATCAGTTCTTTGGGTaGCAGGCTCAGGACTCGCTCTCCTTTGCACCATGTTGCACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IGPRQQVQGYYQFFG*QAQDSLSFAPCCTP Trigger: AGGAGTGCAACATGGTGCAAAGGAGAGCGAGTCCTGAGCCTGCAACCCAAAGAACTGATAGTAGCCCTGGACCTGCTGTCGAGGGCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS CAA 72 bp | CGACAGCAGGTCCAGGGCTACTATCAGTTCTTTGGGTaGCAGGCTCAGGACTCGCTCTCCTTTGCACCATGT | + |
|
Preference number: 6 (lower is better) Translates to: RQQVQGYYQFFG*QAQDSLSFAPC Trigger: ACATGGTGCAAAGGAGAGCGAGTCCTGAGCCTGCAACCCAAAGAACTGATAGTAGCCCTGGACCTGCTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS GCA 72 bp | GACAGCAGGTCCAGGGCTACTATCAGTTCTTTGGGTTaGAGGCTCAGGACTCGCTCTCCTTTGCACCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: DSRSRATISSLG*RLRTRSPLHHV Trigger: AACATGGTGCAAAGGAGAGCGAGTCCTGAGCCTGCAACCCAAAGAACTGATAGTAGCCCTGGACCTGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS TCA 72 bp | GGCCAGGGCTGCTATCGCCTATCTCGTCAATTTCTTTaGCAATTTCAGCTGGTGCCTGATCGACTGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GQGCYRLSRQFL*QFQLVPDRLAP Trigger: AGGTGCCAGTCGATCAGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGATAGGCGATAGCAGCCCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS TCA 72 bp | CATGTTGCACTCCTAATCATCGTTTTACACTTGACGTaGCACATGGGCTCAGTGCTGGAGACCAGGCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HVALLIIVLHLT*HMGSVLETRRW Trigger: CCACCGCCTGGTCTCCAGCACTGAGCCCATGTGTCACGTCAAGTGTAAAACGATGATTAGGAGTGCAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS TCA 72 bp | GTTTTCTGGGAACTATATGAATATAGTCCAGCTTCTTaGAGCGCTCCCGGCCTGCAGCCACGTACTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VFWELYEYSPAS*SAPGLQPRTCH Trigger: GTGGCAAGTACGTGGCTGCAGGCCGGGAGCGCTTCAAGAAGCTGGACTATATTCATATAGTTCCCAGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS TCA 72 bp | ATCTCGTCAATTTCTTTGACAATTTCAGCTGGTGCCTaGTCGACTGGCACCTCCACCTTCACCTCTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISSISLTISAGA*STGTSTFTSGS Trigger: GGACCCAGAGGTGAAGGTGGAGGTGCCAGTCGATCAGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS GCA 72 bp | GCCTATCTCGTCAATTTCTTTGACAATTTCAGCTGGTaGCTGATCGACTGGCACCTCCACCTTCACCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AYLVNFFDNFSW*LIDWHLHLHLW Trigger: CCAGAGGTGAAGGTGGAGGTGCCAGTCGATCAGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGATAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS GCA 72 bp | AACCACCTCTTTATTCTTGCAGAAGTTCTTGAGAGCTaGAATGAAGACCTGGGGCCCCTGCAACTGGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NHLFILAEVLES*NEDLGPLQLAC Trigger: ACAGGCCAGTTGCAGGGGCCCCAGGTCTTCATTGCAGCTCTCAAGAACTTCTGCAAGAATAAAGAGGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS CCA 72 bp | ATCGCCTATCTCGTCAATTTCTTTGACAATTTCAGCTaGTGCCTGATCGACTGGCACCTCCACCTTCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: IAYLVNFFDNFS*CLIDWHLHLHL Trigger: GAGGTGAAGGTGGAGGTGCCAGTCGATCAGGCACCAGCTGAAATTGTCAAAGAAATTGACGAGATAGGCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS GCA 72 bp | TTTGTTTGCGTGTATTTATCATTGCCTCCAAATCTCTaGTGGACCTCACTGGGGACCCATGAGGACTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FVCVYLSLPPNL*WTSLGTHEDFQ Trigger: CTGGAAGTCCTCATGGGTCCCCAGTGAGGTCCAGCAGAGATTTGGAGGCAATGATAAATACACGCAAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS CAA 72 bp | AGTTCTTTGGGTTGCAGGCTCAGGACTCGCTCTCCTTaGCACCATGTTGCACTCCTAATCATCGTTTTACAC | + |
|
Preference number: 6 (lower is better) Translates to: SSLGCRLRTRSP*HHVALLIIVLH Trigger: GTGTAAAACGATGATTAGGAGTGCAACATGGTGCAAAGGAGAGCGAGTCCTGAGCCTGCAACCCAAAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185916.3 |
||
| CDS GCA 72 bp | ACTCCACTCTTTTCTTTGTTTGCGTGTATTTATCATTaGCTCCAAATCTCTGCTGGACCTCACTGGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: TPLFSLFACIYH*LQISAGPHWGP Trigger: GGGTCCCCAGTGAGGTCCAGCAGAGATTTGGAGGCAATGATAAATACACGCAAACAAAGAAAAGAGTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS CAA 90 bp | ATGTATCGGGATGTCCTGCTCTGTATTTGCCATCTAGAAGGCACTTaGATATCACAATGGACCACCGGCTTGATTTCCTTCAACTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: MYRDVLLCICHLEGT*ISQWTTGLISFNFL Trigger: GAGAAAGTTGAAGGAAATCAAGCCGGTGGTCCATTGTGATATCAAAGTGCCTTCTAGATGGCAAATACAGAGCAGGACATCCCGATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS CAA 90 bp | TCCATTTGTGAAAACGTTTATGTATCGGGATGTCCTGCTCTGTATTaGCCATCTAGAAGGCACTTTGATATCACAATGGACCACCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SICENVYVSGCPALY*PSRRHFDITMDHRL Trigger: AAGCCGGTGGTCCATTGTGATATCAAAGTGCCTTCTAGATGGCAAATACAGAGCAGGACATCCCGATACATAAACGTTTTCACAAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS CAA 72 bp | GGCGTTGGAACCACCTCTTTATTCTTGCAGAAGTTCTaGAGAGCTGCTTTCTGTCAATATCTTCATAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GVGTTSLFLQKF*RAAFCQYLHKA Trigger: GGCTTTATGAAGATATTGACAGAAAGCAGCTCTCAAGAACTTCTGCAAGAATAAAGAGGTGGTTCCAACGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221349.2 |
||
| CDS CCA 72 bp | TGTATTTGCCATCTAGAAGGCACTTTGATATCACAATaGACCACCGGCTTGATTTCCTTCAACTTTCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: CICHLEGTLISQ*TTGLISFNFLI Trigger: GATGAGAAAGTTGAAGGAAATCAAGCCGGTGGTCCATTGTGATATCAAAGTGCCTTCTAGATGGCAAATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS CAA 72 bp | GAAAACGTTTATGTATCGGGATGTCCTGCTCTGTATTaGCCATCTAGAAGGCACTTTGATATCACAATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ENVYVSGCPALY*PSRRHFDITMD Trigger: GTCCATTGTGATATCAAAGTGCCTTCTAGATGGCAAATACAGAGCAGGACATCCCGATACATAAACGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000221349.2 |
||
| CDS CCA 72 bp | CTCTTTGGCATAATAAACAGAATCCTGACTTCTAGGTaGTACACTGTCATTTTGAAGAGGTTCTTTTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LFGIINRILTSR*YTVILKRFFYF Trigger: AAAGTAAAAGAACCTCTTCAAAATGACAGTGTACCACCTAGAAGTCAGGATTCTGTTTATTATGCCAAAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||
| CDS GCA 72 bp | CTTCCAGTAAGGAATGGATTTAAAAGTCTCCAGTCCTaGAGCAACATAAAAATAATTGTCTTGCAAATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPVRNGFKSLQS*SNIKIIVLQIL Trigger: AAGAATTTGCAAGACAATTATTTTTATGTTGCTGCAGGACTGGAGACTTTTAAATCCATTCCTTACTGGAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020963.8 ENSMUST00000185916.3 ENSMUST00000189735.7 ENSMUST00000221349.2 |
||