Pregenerated sensors for DCAF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049354Ensembl transcript IDs: ENSMUST00000058438.9
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGCACCAGCGCAGTTGTCAACTCCCGGTCAGGGGTCAGGGCTGTaGCCCACAGGCAGTGACTCAGGAAAGCAAACTGCTCGTGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: RAPAQLSTPGQGSGL*PTGSDSGKQTARGV Trigger: GACCCCACGAGCAGTTTGCTTTCCTGAGTCACTGCCTGTGGGGCACAGCCCTGACCCCTGACCGGGAGTTGACAACTGCGCTGGTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR GCA 90 bp | GGTCACTGGCCTAGCCTGAGGCCTGCGCTAGGGAAGAAGCACGGATaGTGGGGCAGTGGCTCATCCTGTGCTCCCAGCACTCAGTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: GHWPSLRPALGKKHG*WGSGSSCAPSTQFK Trigger: CTTGAACTGAGTGCTGGGAGCACAGGATGAGCCACTGCCCCAGCATCCGTGCTTCTTCCCTAGCGCAGGCCTCAGGCTAGGCCAGTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR TCA 90 bp | TGGGCCTCCGAGGGCCTTCAGGAGACCCAGGCTGAGAACGGTTGGTaGGTCAGTAGACTTCAGAGCACCAGCGCAGTTGTCAACTCCCGG | + |
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Preference number: 1 (lower is better) Translates to: WASEGLQETQAENGW*VSRLQSTSAVVNSR Trigger: CCGGGAGTTGACAACTGCGCTGGTGCTCTGAAGTCTACTGACTCACCAACCGTTCTCAGCCTGGGTCTCCTGAAGGCCCTCGGAGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | AAAGAAACGGCAGGGGCTAGAGGGTGTGGTTCAGTGGCAGGTCACTaGCCTAGCCTGAGGCCTGCGCTAGGGAAGAAGCACGGATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: KETAGARGCGSVAGH*PSLRPALGKKHGCW Trigger: CCAGCATCCGTGCTTCTTCCCTAGCGCAGGCCTCAGGCTAGGCCAGTGACCTGCCACTGAACCACACCCTCTAGCCCCTGCCGTTTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR GCA 90 bp | AGCAATGGCAGCATGAGTGGCCAACCAGCCATCAGCCATCAGGCCTaGTGCTCTCCTTGTCCCAGAGCGTCTAAGAAACCTGCAAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SNGSMSGQPAISHQA*CSPCPRASKKPASS Trigger: GCTGCTTGCAGGTTTCTTAGACGCTCTGGGACAAGGAGAGCAGCAGGCCTGATGGCTGATGGCTGGTTGGCCACTCATGCTGCCATTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | GCAGTGGCGCCACACAGCACAGTCCAACACAGACAGCGGGGTAACTaGCCTGGACTTCTACAGCAGCTTCTGAACACAGTGGGTGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: AVAPHSTVQHRQRGN*PGLLQQLLNTVGVK Trigger: CTTTACACCCACTGTGTTCAGAAGCTGCTGTAGAAGTCCAGGCCAGTTACCCCGCTGTCTGTGTTGGACTGTGCTGTGTGGCGCCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR TCA 90 bp | ACTGAGGGCTCCTACAGCAGCAACCATCAGCAAGTCTGCTACCTTTaGGGAGTCTGTACCTGGCTGGCAAACGCCACTAAGAGCAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: TEGSYSSNHQQVCYL*GVCTWLANATKSRG Trigger: CCCTCTGCTCTTAGTGGCGTTTGCCAGCCAGGTACAGACTCCTCAAAGGTAGCAGACTTGCTGATGGTTGCTGCTGTAGGAGCCCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR TCA 90 bp | CGCCCTGACTCAGCCTACTACTGTAGACTCAGCCCAGGAAGAAACTaGGGGCTCCTACAGCAGCAACCATCAGCAAGTCTGCTACCTTTG | + |
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Preference number: 1 (lower is better) Translates to: RPDSAYYCRLSPGRN*GLLQQQPSASLLPL Trigger: CAAAGGTAGCAGACTTGCTGATGGTTGCTGCTGTAGGAGCCCTCAGTTTCTTCCTGGGCTGAGTCTACAGTAGTAGGCTGAGTCAGGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR TCA 90 bp | TCCCACTTAAGTGCTAGCACGACACAGATGGGGACACGAGATGGATaGCTGCCTCAGCAGCAGACAGACAGACATGGGCAAATGGACACA | + |
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Preference number: 1 (lower is better) Translates to: SHLSASTTQMGTRDG*LPQQQTDRHGQMDT Trigger: TGTGTCCATTTGCCCATGTCTGTCTGTCTGCTGCTGAGGCAGTCATCCATCTCGTGTCCCCATCTGTGTCGTGCTAGCACTTAAGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | TTAACTGAAGAGAGGGCAGGTGCCACAGGCGTGGAGAGTCTTAGCTaGCTGGCCCTGAGTCTACCTTGGCTGATTTGCTCATCATTTATG | + |
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Preference number: 1 (lower is better) Translates to: LTEERAGATGVESLS*LALSLPWLICSSFM Trigger: CATAAATGATGAGCAAATCAGCCAAGGTAGACTCAGGGCCAGCCAGCTAAGACTCTCCACGCCTGTGGCACCTGCCCTCTCTTCAGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | GCAGTGGCTCATCCTGTGCTCCCAGCACTCAGTTCAAGGATAGCCTaGTCTACAAAGAAAGAACCTGTCTCAAACAGTGTCATCATGCAC | + |
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Preference number: 1 (lower is better) Translates to: AVAHPVLPALSSRIA*STKKEPVSNSVIMH Trigger: GTGCATGATGACACTGTTTGAGACAGGTTCTTTCTTTGTAGACCAGGCTATCCTTGAACTGAGTGCTGGGAGCACAGGATGAGCCACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | TGTACATCACAGTCAGCCCAAGGTGAGAACGTTTCTTTCCAATGGTaGATAGCACAGTTCGGCTTCACTTGTACACTTCCCAGCTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: CTSQSAQGENVSFQW*IAQFGFTCTLPSCC Trigger: GCAACAGCTGGGAAGTGTACAAGTGAAGCCGAACTGTGCTATCCACCATTGGAAAGAAACGTTCTCACCTTGGGCTGACTGTGATGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | CACTGTACATCACAGTCAGCCCAAGGTGAGAACGTTTCTTTCCAATaGTGGATAGCACAGTTCGGCTTCACTTGTACACTTCCCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: HCTSQSAQGENVSFQ*WIAQFGFTCTLPSC Trigger: ACAGCTGGGAAGTGTACAAGTGAAGCCGAACTGTGCTATCCACCATTGGAAAGAAACGTTCTCACCTTGGGCTGACTGTGATGTACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR TCA 90 bp | CCCAACAATTCCCATAACACACTGTACATCACAGTCAGCCCAAGGTaGGAACGTTTCTTTCCAATGGTGGATAGCACAGTTCGGCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: PNNSHNTLYITVSPR*ERFFPMVDSTVRLH Trigger: GTGAAGCCGAACTGTGCTATCCACCATTGGAAAGAAACGTTCTCACCTTGGGCTGACTGTGATGTACAGTGTGTTATGGGAATTGTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | CTTGTACACTTCCCAGCTGTTGCACAGATGTCAGCATCGATCCTTTaGAGTCTAAGCTTCTTCTGGCTGACACATCAGTCTAAGCATCTC | + |
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Preference number: 1 (lower is better) Translates to: LVHFPAVAQMSASIL*SLSFFWLTHQSKHL Trigger: GAGATGCTTAGACTGATGTGTCAGCCAGAAGAAGCTTAGACTCCAAAGGATCGATGCTGACATCTGTGCAACAGCTGGGAAGTGTACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR TCA 90 bp | AGAGGGGTCATAACATACACGGGATCAAAGCAAGGGACTCAGATTTaGCGAAAGCTTCAGCCCAACAATTCCCATAACACACTGTACATC | + |
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Preference number: 1 (lower is better) Translates to: RGVITYTGSKQGTQI*RKLQPNNSHNTLYI Trigger: GATGTACAGTGTGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTTGCTTTGATCCCGTGTATGTTATGACCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR TCA 90 bp | AGGTTTATACAATCATGCTATAATTCACACTCAGGGGAAAGTCACTaGCAGAGGGGTCATAACATACACGGGATCAAAGCAAGGGACTCA | + |
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Preference number: 1 (lower is better) Translates to: RFIQSCYNSHSGESH*QRGHNIHGIKARDS Trigger: TGAGTCCCTTGCTTTGATCCCGTGTATGTTATGACCCCTCTGTCAGTGACTTTCCCCTGAGTGTGAATTATAGCATGATTGTATAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR TCA 90 bp | TTACCTAATCTAGTTGGAGAGCAGAAAAGGAAGACTGAAGAAAGTTaGCAAGTGTCCACAGAGCAAGGAAAAAGTCATCACGTGGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: LPNLVGEQKRKTEES*QVSTEQGKSHHVVG Trigger: ACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACTTGTCAACTTTCTTCAGTCTTCCTTTTCTGCTCTCCAACTAGATTAGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | AGTGAATCTAAATCTAAGACTTTTGGCATACAACTACATCAGTTGTaGAAGCAAGCAAAGACTCTGCCAGACAGTCCATGTTCCCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: SESKSKTFGIQLHQL*KQAKTLPDSPCSQK Trigger: CTTCTGGGAACATGGACTGTCTGGCAGAGTCTTTGCTTGCTTCCACAACTGATGTAGTTGTATGCCAAAAGTCTTAGATTTAGATTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | AAGAAAGTTGACAAGTGTCCACAGAGCAAGGAAAAAGTCATCACGTaGTTGGTTTCCAAAGCACATAGAGACCTCACACAAATGTATTCT | + |
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Preference number: 1 (lower is better) Translates to: KKVDKCPQSKEKVIT*LVSKAHRDLTQMYS Trigger: AGAATACATTTGTGTGAGGTCTCTATGTGCTTTGGAAACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACTTGTCAACTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CCA 90 bp | TCATTCAAGTTCGAAACTGGAAAAATAGATTCTGAAACCAGGTACTaGAAACACAATATAAGTTCAGCTTTCCTGAACATGATTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SFKFETGKIDSETRY*KHNISSAFLNMILL Trigger: AAGGAGAATCATGTTCAGGAAAGCTGAACTTATATTGTGTTTCCAGTACCTGGTTTCAGAATCTATTTTTCCAGTTTCGAACTTGAATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR GCA 90 bp | CCACCAGACATCACGCTGCTGCCAGAAGGGCTCTCCGCCCACAGTACCTCCTGGGCTCCCCAGCACAGGTaGTCCCCAGCACAGGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PPDITLLPEGLSAHSTSWAPQHR*SPAQVL Trigger: GAGCACCTGTGCTGGGGAGCACCTGTGCTGGGGAGC...CCAGGAGGTACTGTGGGCGGAGAGCCCTTCTGGCAGCAGCGTGATGTCTGGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGTCAGGAAAGGGATCAATCTCCAGTGGGGACAGCGCAAGCCCACAAAAGCCGCCTCCTGCATCTCCTaGGCCTCCGAGGGCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: EVRKGINLQWGQRKPTKAASCIS*ASEGLQ Trigger: CTGAAGGCCCTCGGAGGCCCAGGAGATGCAGGAGGC...GGCTTTTGTGGGCTTGCGCTGTCCCCACTGGAGATTGATCCCTTTCCTGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CAA 90 bp | CTGAGAACGGTTGGTGAGTCAGTAGACTTCAGAGCACCAGCGCAGTaGTCAACTCCCGGTCAGGGGTCAGGGCTGTGCCCCACAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LRTVGESVDFRAPAQ*STPGQGSGLCPTGS Trigger: ACTGCCTGTGGGGCACAGCCCTGACCCCTGACCGGGAGTTGACAACTGCGCTGGTGCTCTGAAGTCTACTGACTCACCAACCGTTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAAGTCCCCACCGACTTGTCTCATGTCACTCTCCTCCTCAAGCCCAGCCTGCTCCCCAGCACAGGTaGTCCCTACAGGCCCTGCGA | + |
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Preference number: 2 (lower is better) Translates to: IGSPHRLVSCHSPPQAQPAPQHR*SLQALR Trigger: TCGCAGGGCCTGTAGGGAGCACCTGTGCTGGGGAGC...AGGCTGGGCTTGAGGAGGAGAGTGACATGAGACAAGTCGGTGGGGACTTCCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CAA 90 bp | CTCAGCCCCACAGGGTACTCAACTAGTGAAGCCAGAGAAAGGGACTaGAGGGTGAACAGAAGCCTCCTGCATCTCCTGGGCCTCCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSPTGYSTSEARERD*RVNRSLLHLLGLRG Trigger: CCCTCGGAGGCCCAGGAGATGCAGGAGGCTTCTGTTCACCCTCAAGTCCCTTTCTCTGGCTTCACTAGTTGAGTACCCTGTGGGGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR GCA 90 bp | GATGGGCCAGTGTCCCACCAGGTAGAGGAGACTCAGCAAACAGAAACACAGAAGAACCCAGCCCTGGGCTaGAGTGGCGCCACACAGCAC | + |
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Preference number: 2 (lower is better) Translates to: DGPVSHQVEETQQTETQKNPALG*SGATQH Trigger: GTGCTGTGTGGCGCCACTGCAGCCCAGGGCTGGGTT...CTTCTGTGTTTCTGTTTGCTGAGTCTCCTCTACCTGGTGGGACACTGGCCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAAGTCCCCACCGACTTGTCTCATGTCACTCTCCTCCTCAAGCCCAGCCTCAGGGGTCAGGGCTGTaGCCCACAGGCAGTGACTCA | + |
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Preference number: 2 (lower is better) Translates to: IGSPHRLVSCHSPPQAQPQGSGL*PTGSDS Trigger: TGAGTCACTGCCTGTGGGGCACAGCCCTGACCCCTG...AGGCTGGGCTTGAGGAGGAGAGTGACATGAGACAAGTCGGTGGGGACTTCCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR TCA 90 bp | GGTCACTGGCCTAGCCTGAGGCCTGCGCTAGGGAAGAAGCACGGATGCTGGGGCGACCCAAAATCAGAATaGCAGATTAGGAAGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GHWPSLRPALGKKHGCWGDPKSE*QIRKAK Trigger: CTTGGCCTTCCTAATCTGTCATTCTGATTTTGGGTC...GCCCCAGCATCCGTGCTTCTTCCCTAGCGCAGGCCTCAGGCTAGGCCAGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR TCA 90 bp | CGGAGGTCAGGAAAGGGATCAATCTCCAGTGGGGACAGCGCAAGCCCACAAAAGGCTCATAACCTTAACTaGAGAGAGGGCAGGTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: RRSGKGSISSGDSASPQKAHNLN*REGRCH Trigger: GTGGCACCTGCCCTCTCTTCAGTTAAGGTTATGAGC...CTTTTGTGGGCTTGCGCTGTCCCCACTGGAGATTGATCCCTTTCCTGACCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAGCAAAGACTCTGCCAGACAGTCCATGTTCCCAGAAGAATGAGTCGACAAGCCCTGGGCTGCAGTaGCGCCACACAGCACAGTCC | + |
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Preference number: 2 (lower is better) Translates to: KQAKTLPDSPCSQKNESTSPGLQ*RHTAQS Trigger: GGACTGTGCTGTGTGGCGCCACTGCAGCCCAGGGCT...TGTCGACTCATTCTTCTGGGAACATGGACTGTCTGGCAGAGTCTTTGCTTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | GATAGGAAGTCCCCACCGACTTGTCTCATGTCACTCTCCTCCTCAAGCCCAGCCGCCTGTAAGTCAGCATaGCCAACTGCAGCCTACAAA | + |
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Preference number: 2 (lower is better) Translates to: DRKSPPTCLMSLSSSSPAACKSA*PTAAYK Trigger: TTTGTAGGCTGCAGTTGGCCATGCTGACTTACAGGC...GGCTGGGCTTGAGGAGGAGAGTGACATGAGACAAGTCGGTGGGGACTTCCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR CAA 90 bp | CTAGGAAGTAAGGTCACAGAAGGGACACTCCACCCTCAGGTGCTTTaGAAGTCACCTCCAGTGGAGAAACCGCAGCTCGTTGACAACACA | + |
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Preference number: 2 (lower is better) Translates to: LGSKVTEGTLHPQVL*KSPPVEKPQLVDNT Trigger: TGTGTTGTCAACGAGCTGCGGTTTCTCCACTGGAGGTGACTTCAAAAGCACCTGAGGGTGGAGTGTCCCTTCTGTGACCTTACTTCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAACTTTAACAGAGCTGTGCTTCAGGGAAGAGAGCAGACTTATGGACTTCGAAGGGGGCAGAGGCTaGAGCACACAAGCCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: FETLTELCFREESRLMDFEGGRG*STQAPA Trigger: GGCAGGGGCTTGTGTGCTTCAGCCTCTGCCCCCTTC...GAAGTCCATAAGTCTGCTCTCTTCCCTGAAGCACAGCTCTGTTAAAGTTTCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAAACCTGCAAGCAGCTCAGCAGATTATAAACAGCCACCCTCTCCTAGACCATTTAAAACCCAGCCCTaGGCTGCAGTGGCGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: KKPASSSADYKQPPSPRPFKTQP*AAVAPH Trigger: GTGTGGCGCCACTGCAGCCCAGGGCTGGGTTTTAAA...TGGTCTAGGAGAGGGTGGCTGTTTATAATCTGCTGAGCTGCTTGCAGGTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | GATGGGCCAGTGTCCCACCAGGTAGAGGAGACTCAGCAAACAGAAACACAGAAGACAGACATGGGCAAATaGACACAGACAGAGCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: DGPVSHQVEETQQTETQKTDMGK*TQTEPV Trigger: CACTGGCTCTGTCTGTGTCCATTTGCCCATGTCTGT...CTTCTGTGTTTCTGTTTGCTGAGTCTCCTCTACCTGGTGGGACACTGGCCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTGTCCACAGAGCAAGGAAAAAGTCATCACGTGGTTGGTTTCCAAAGCACTCAGGAGACCCAGGCTaGGAACGGTTGGTGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: TSVHRARKKSSRGWFPKHSGDPG*ERLVSQ Trigger: CTGACTCACCAACCGTTCTCAGCCTGGGTCTCCTGA...GTGCTTTGGAAACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCACTTGTACACTTCCCAGCTGTTGCACAGATGTCAGCATCGATCCTTTGGCATGTTCTTCTTACATaGGAGGGAAGGGGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ASLVHFPAVAQMSASILWHVLLT*EGRGQR Trigger: CCTCTGCCCCCTTCCCTCCCATGTAAGAAGAACATG...CCAAAGGATCGATGCTGACATCTGTGCAACAGCTGGGAAGTGTACAAGTGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACACACTGTGAGGGTGTGGTTCAGTaGCAGGTCACTGGCCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: KGLRFDESFSPTIPITHCEGVVQ*QVTGLA Trigger: GGCTAGGCCAGTGACCTGCCACTGAACCACACCCTC...ACAGTGTGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCAAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACAGTGCCCCACAGGCAGTaGCTCAGGAAAGCAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: QSKGLRFDESFSPTIPITVPHRQ*LRKANC Trigger: GCAGTTTGCTTTCCTGAGTCACTGCCTGTGGGGCAC...TGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTTGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCCGCCCACAGTACCTCCTGGCACCCAGCGACACAGAGGCTTCATTAATGGTTTAAGAGACTGGCTTTaGAACTTTAACAGAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SPPTVPPGTQRHRGFINGLRDWL*NFNRAV Trigger: CACAGCTCTGTTAAAGTTTCAAAGCCAGTCTCTTAA...ACCATTAATGAAGCCTCTGTGTCGCTGGGTGCCAGGAGGTACTGTGGGCGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCAAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACAGAGACACTCAGCTGCTaGCTCACAGGAGGAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QSKGLRFDESFSPTIPITETLSC*LTGGED Trigger: GTCCTCTCCTCCTGTGAGGCAGCAGCTGAGTGTCTC...TGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTTGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAAACCTGCAAGCAGCTCAGCAGATTATAAACAGCCACCCTCTCCTAGACCACTAGCACGACACAGATaGGGACACGAGATGGATGAC | + |
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Preference number: 2 (lower is better) Translates to: KKPASSSADYKQPPSPRPLARHR*GHEMDD Trigger: GTCATCCATCTCGTGTCCCCATCTGTGTCGTGCTAG...TGGTCTAGGAGAGGGTGGCTGTTTATAATCTGCTGAGCTGCTTGCAGGTTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAACTTTAACAGAGCTGTGCTTCAGGGAAGAGAGCAGACTTATGGACTTCCCAGCAATGGCAGCATaGGTGGCCAACCAGCCATCA | + |
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Preference number: 2 (lower is better) Translates to: FETLTELCFREESRLMDFPAMAA*VANQPS Trigger: TGATGGCTGGTTGGCCACTCATGCTGCCATTGCTGG...GAAGTCCATAAGTCTGCTCTCTTCCCTGAAGCACAGCTCTGTTAAAGTTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACACACTGTATCAGCCATCAGGCCTaGTGCTCTCCTTGTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: KGLRFDESFSPTIPITHCISHQA*CSPCPR Trigger: TCTGGGACAAGGAGAGCAGCAGGCCTGATGGCTGAT...ACAGTGTGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | GATGGGCCAGTGTCCCACCAGGTAGAGGAGACTCAGCAAACAGAAACACAGAAGAGACATACTGGCCACTaGGAACATGTTCTTCTTACA | + |
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Preference number: 2 (lower is better) Translates to: DGPVSHQVEETQQTETQKRHTGH*EHVLLT Trigger: TGTAAGAAGAACATGTTCCCAGTGGCCAGTATGTCT...CTTCTGTGTTTCTGTTTGCTGAGTCTCCTCTACCTGGTGGGACACTGGCCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAAGTCCCCACCGACTTGTCTCATGTCACTCTCCTCCTCAAGCCCAGCCTTTTGTTAAAAGACACTaGTGCCAGGAGGAAAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: IGSPHRLVSCHSPPQAQPFVKRH*CQEERQ Trigger: TTGTCTTTCCTCCTGGCACCAGTGTCTTTTAACAAA...AGGCTGGGCTTGAGGAGGAGAGTGACATGAGACAAGTCGGTGGGGACTTCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGATAGCCTGGTCTACAAAGAAAGAACCTGTCTCAAACAGTGTCATCATGCAAGCCCCACCAGAGCCTaGAGCCTAGAGGACAGATCT | + |
|
Preference number: 2 (lower is better) Translates to: KDSLVYKERTCLKQCHHASPTRA*SLEDRS Trigger: AGATCTGTCCTCTAGGCTCCAGGCTCTGGTGGGGCT...TGCATGATGACACTGTTTGAGACAGGTTCTTTCTTTGTAGACCAGGCTATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGAAAGAGAGAATGTAGATGGCTCGAGGTGAACAAGATTGGAGACGTGAGAAGGCCTCTATTGCAATaGTACTCTAGCCTGAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GRKRECRWLEVNKIGDVRRPLLQ*YSSLSQ Trigger: CTGGCTCAGGCTAGAGTACCATTGCAATAGAGGCCT...TCTCACGTCTCCAATCTTGTTCACCTCGAGCCATCTACATTCTCTCTTTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGATAGCCTGGTCTACAAAGAAAGAACCTGTCTCAAACAGTGTCATCATGCAGATGGGGACACGAGATaGATGACTGCCTCAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KDSLVYKERTCLKQCHHADGDTR*MTASAA Trigger: TGCTGCTGAGGCAGTCATCCATCTCGTGTCCCCATC...TGCATGATGACACTGTTTGAGACAGGTTCTTTCTTTGTAGACCAGGCTATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR TCA 90 bp | AACCAGGTACTGGAAACACAATATAAGTTCAGCTTTCCTGAACATGATTCTCCTACCCACTGCAGGCACTaGGGGAAGAGAGGAAGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: NQVLETQYKFSFPEHDSPTHCRH*GKRGRY Trigger: GTACCTTCCTCTCTTCCCTCAGTGCCTGCAGTGGGT...AGGAGAATCATGTTCAGGAAAGCTGAACTTATATTGTGTTTCCAGTACCTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGAAAGAGAGAATGTAGATGGCTCGAGGTGAACAAGATTGGAGACGTGAGACAAGGAGAAATACCCTaGCTGAAAAGGCCTTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GRKRECRWLEVNKIGDVRQGEIP*LKRPFL Trigger: AAGGAAAGGCCTTTTCAGTCAGGGTATTTCTCCTTG...TCTCACGTCTCCAATCTTGTTCACCTCGAGCCATCTACATTCTCTCTTTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGGATAGCCTGGTCTACAAAGAAAGAACCTGTCTCAAACAGTGTCATCATGCACACGAGATGGATGACTaGCTCAGCAGCAGACAGACA | + |
|
Preference number: 2 (lower is better) Translates to: KDSLVYKERTCLKQCHHAHEMDD*LSSRQT Trigger: TGTCTGTCTGCTGCTGAGGCAGTCATCCATCTCGTG...TGCATGATGACACTGTTTGAGACAGGTTCTTTCTTTGTAGACCAGGCTATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTTCACTTGTACACTTCCCAGCTGTTGCACAGATGTCAGCATCGATCCTTTGGTTCCGTAATGCCACATaGTTGACTCTGAACATTAGC | + |
|
Preference number: 2 (lower is better) Translates to: ASLVHFPAVAQMSASILWFRNAT*LTLNIS Trigger: GCTAATGTTCAGAGTCAAGCATGTGGCATTACGGAA...CCAAAGGATCGATGCTGACATCTGTGCAACAGCTGGGAAGTGTACAAGTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGGTACTCAACTAGTGAAGCCAGAGAAAGGGACTTGAGGGTGAACAGAAGCAAAGAGGGAAATCTGTaGAATCAAGAAACCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TGYSTSEARERDLRVNRSKEGNL*NQETRK Trigger: CTTTCTGGTTTCTTGATTTCACAGATTTCCCTCTTT...GCTTCTGTTCACCCTCAAGTCCCTTTCTCTGGCTTCACTAGTTGAGTACCCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGAAAGAGAGAATGTAGATGGCTCGAGGTGAACAAGATTGGAGACGTGAGAGAAAAAGTCATCACGTaGTTGGTTTCCAAAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: GRKRECRWLEVNKIGDVREKVIT*LVSKAH Trigger: ATGTGCTTTGGAAACCAACCACGTGATGACTTTTTC...TCTCACGTCTCCAATCTTGTTCACCTCGAGCCATCTACATTCTCTCTTTCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAAACTTTAACAGAGCTGTGCTTCAGGGAAGAGAGCAGACTTATGGACTTCTTTGCTCATCATTTATaGGAACTGCCTGTCTGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: FETLTELCFREESRLMDFFAHHL*ELPVCH Trigger: GTGACAGACAGGCAGTTCTCATAAATGATGAGCAAA...GAAGTCCATAAGTCTGCTCTCTTCCCTGAAGCACAGCTCTGTTAAAGTTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACACACTGTCTGTCTCCAGTTATCTaGCCTAATGCTGATTTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: KGLRFDESFSPTIPITHCLSPVI*PNADFD Trigger: ATCAAAATCAGCATTAGGTCAGATAACTGGAGACAG...ACAGTGTGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACACACTGTAAGACAATCTCAAGTTaGCCTTTGTTCCCACTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: KGLRFDESFSPTIPITHCKTISS*PLFPLK Trigger: CTTAAGTGGGAACAAAGGCCAACTTGAGATTGTCTT...ACAGTGTGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGCAAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACAAAGAGAGAATGTAGATaGCTCGAGGTGAACAAGATT | + |
|
Preference number: 2 (lower is better) Translates to: QSKGLRFDESFSPTIPITKRECR*LEVNKI Trigger: AATCTTGTTCACCTCGAGCCATCTACATTCTCTCTT...TGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTTGCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACACACTGTTGGAAAAATAGATTCTaGAACCAGGTACTGGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: KGLRFDESFSPTIPITHCWKNRF*NQVLET Trigger: TGTTTCCAGTACCTGGTTTCAGAATCTATTTTTCCA...ACAGTGTGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 90 bp | CCTTTGGGACAAGGTCCTAATATAGTGAATCTAAATCTAAGACTTTaGGCATACAACTACATCAGTTGTGGAAGCAAGCAAAGACTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PLGQGPNIVNLNLRL*AYNYISCGSKQRLC Trigger: GCAGAGTCTTTGCTTGCTTCCACAACTGATGTAGTTGTATGCCAAAAGTCTTAGATTTAGATTCACTATATTAGGACCTTGTCCCAAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 90 bp | TTAGGAAGGCCAAGGAGAAATACCCTGACTGAAAAGGCCTTTCCTTaGGGACAAGGTCCTAATATAGTGAATCTAAATCTAAGACTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LGRPRRNTLTEKAFP*GQGPNIVNLNLRLL Trigger: CAAAAGTCTTAGATTTAGATTCACTATATTAGGACCTTGTCCCAAAGGAAAGGCCTTTTCAGTCAGGGTATTTCTCCTTGGCCTTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | GCAGGGGCTAGAGGGTGTGGTTCAGTGGCAGGTCACTaGCCTAGCCTGAGGCCTGCGCTAGGGAAGAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AGARGCGSVAGH*PSLRPALGKKH Trigger: GTGCTTCTTCCCTAGCGCAGGCCTCAGGCTAGGCCAGTGACCTGCCACTGAACCACACCCTCTAGCCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR GCA 72 bp | CAGGTGCTCCCCAGCACAGGTGCTCCCTACAGGCCCTaGGACGCCCTGACTCAGCCTACTACTGTAGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: QVLPSTGAPYRP*DALTQPTTVDS Trigger: TGAGTCTACAGTAGTAGGCTGAGTCAGGGCGTCGCAGGGCCTGTAGGGAGCACCTGTGCTGGGGAGCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | GCTCAGACCAGCTCTCCTCTCAGAAAACCCACATGCTaGATAGGCCGGCCTTCCTCACCCTCAGGGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AQTSSPLRKPTC*IGRPSSPSGQA Trigger: AGCCTGCCCTGAGGGTGAGGAAGGCCGGCCTATTCAGCATGTGGGTTTTCTGAGAGGAGAGCTGGTCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | GAGAGGGCAGGTGCCACAGGCGTGGAGAGTCTTAGCTaGCTGGCCCTGAGTCTACCTTGGCTGATTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ERAGATGVESLS*LALSLPWLICS Trigger: TGAGCAAATCAGCCAAGGTAGACTCAGGGCCAGCCAGCTAAGACTCTCCACGCCTGTGGCACCTGCCCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | GAGGGCCTTCAGGAGACCCAGGCTGAGAACGGTTGGTaGGTCAGTAGACTTCAGAGCACCAGCGCAGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: EGLQETQAENGW*VSRLQSTSAVV Trigger: GACAACTGCGCTGGTGCTCTGAAGTCTACTGACTCACCAACCGTTCTCAGCCTGGGTCTCCTGAAGGCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | CTCAGACCCACTCACCAGCTCAGCTCTCTGCTAGTCTaGCCGATCATGCAGCCTCCCCTACAGCAGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LRPTHQLSSLLV*PIMQPPLQQTQ Trigger: CTGTGTCTGCTGTAGGGGAGGCTGCATGATCGGTCAGACTAGCAGAGAGCTGAGCTGGTGAGTGGGTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTCACTGGCCTAGCCTGAGGCCTGCGCTAGGGAAGAAGCACGGATGCTGGGGCGAAAAGGCCTTTCCTTaGGGACAAGGTCCTAATATA | + |
|
Preference number: 3 (lower is better) Translates to: GHWPSLRPALGKKHGCWGEKAFP*GQGPNI Trigger: TATATTAGGACCTTGTCCCAAAGGAAAGGCCTTTTC...GCCCCAGCATCCGTGCTTCTTCCCTAGCGCAGGCCTCAGGCTAGGCCAGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR GCA 72 bp | ATGAGTGGCCAACCAGCCATCAGCCATCAGGCCTGCTaGTCTCCTTGTCCCAGAGCGTCTAAGAAACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: MSGQPAISHQAC*SPCPRASKKPA Trigger: TGCAGGTTTCTTAGACGCTCTGGGACAAGGAGAGCAGCAGGCCTGATGGCTGATGGCTGGTTGGCCACTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | CCACACAGCACAGTCCAACACAGACAGCGGGGTAACTaGCCTGGACTTCTACAGCAGCTTCTGAACACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PHSTVQHRQRGN*PGLLQQLLNTV Trigger: CACTGTGTTCAGAAGCTGCTGTAGAAGTCCAGGCCAGTTACCCCGCTGTCTGTGTTGGACTGTGCTGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | TGGCAAACGCCACTAAGAGCAGAGGGAACCACAAACTaGTCCAGGACAAGCCACAGGTTAGTGCAGGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: WQTPLRAEGTTN*SRTSHRLVQEP Trigger: GGGTTCCTGCACTAACCTGTGGCTTGTCCTGGATCAGTTTGTGGTTCCCTCTGCTCTTAGTGGCGTTTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR GCA 72 bp | GGTGAACAAGATTGGAGACGTGAGACACTCAGCTGCTaGCTCACAGGAGGAGAGGACAACTCTGGGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: GEQDWRRETLSC*LTGGEDNSGKP Trigger: AGGTTTCCCAGAGTTGTCCTCTCCTCCTGTGAGGCAGCAGCTGAGTGTCTCACGTCTCCAATCTTGTTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | TCCTACAGCAGCAACCATCAGCAAGTCTGCTACCTTTaGGGAGTCTGTACCTGGCTGGCAAACGCCACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SYSSNHQQVCYL*GVCTWLANATK Trigger: CTTAGTGGCGTTTGCCAGCCAGGTACAGACTCCTCAAAGGTAGCAGACTTGCTGATGGTTGCTGCTGTAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | TCAGCCTACTACTGTAGACTCAGCCCAGGAAGAAACTaGGGGCTCCTACAGCAGCAACCATCAGCAAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SAYYCRLSPGRN*GLLQQQPSASL Trigger: CAGACTTGCTGATGGTTGCTGCTGTAGGAGCCCTCAGTTTCTTCCTGGGCTGAGTCTACAGTAGTAGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR GCA 72 bp | CAACTCTGGGAAACCTGGCTCAGGGTTCACAGTAACTaGTCAGACCAGCTCTCCTCTCAGAAAACCCACATG | + |
|
Preference number: 3 (lower is better) Translates to: QLWETWLRVHSN*SDQLSSQKTHM Trigger: CATGTGGGTTTTCTGAGAGGAGAGCTGGTCTGAGCAGTTACTGTGAACCCTGAGCCAGGTTTCCCAGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | AGCAAGTCTGCTACCTTTGAGGAGTCTGTACCTGGCTaGCAAACGCCACTAAGAGCAGAGGGAACCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SKSATFEESVPG*QTPLRAEGTTN Trigger: GTTTGTGGTTCCCTCTGCTCTTAGTGGCGTTTGCCAGCCAGGTACAGACTCCTCAAAGGTAGCAGACTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTCAGGAAAGGGATCAATCTCCAGTGGGGACAGCGCAAGCCCACAAAAGCCGCTGAGAGATCTCTCTaGCCTATCATTCAAGTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: EVRKGINLQWGQRKPTKAAERSL*PIIQVR Trigger: TCGAACTTGAATGATAGGCAAGAGAGATCTCTCAGC...GGCTTTTGTGGGCTTGCGCTGTCCCCACTGGAGATTGATCCCTTTCCTGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR GCA 72 bp | CTTAGCTGGCTGGCCCTGAGTCTACCTTGGCTGATTTaGTCATCATTTATGAGAACTGCCTGTCTGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSWLALSLPWLI*SSFMRTACLSQ Trigger: CTGTGACAGACAGGCAGTTCTCATAAATGATGAGCAAATCAGCCAAGGTAGACTCAGGGCCAGCCAGCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR GCA 72 bp | GCACAGTTCGGCTTCACTTGTACACTTCCCAGCTGTTaGACAGATGTCAGCATCGATCCTTTGGAGTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: AQFGFTCTLPSC*TDVSIDPLESK Trigger: CTTAGACTCCAAAGGATCGATGCTGACATCTGTGCAACAGCTGGGAAGTGTACAAGTGAAGCCGAACTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | AGAGAGAGACTTCAAATGCCAGCAACCCTGCAACTGTaGGTACACACGTACTTGGAGGCAGAGATAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RERLQMPATLQL*VHTYLEAEIAR Trigger: TCTTGCTATCTCTGCCTCCAAGTACGTGTGTACCCACAGTTGCAGGGTTGCTGGCATTTGAAGTCTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | CAGTCAGCCCAAGGTGAGAACGTTTCTTTCCAATGGTaGATAGCACAGTTCGGCTTCACTTGTACACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QSAQGENVSFQW*IAQFGFTCTLP Trigger: GGGAAGTGTACAAGTGAAGCCGAACTGTGCTATCCACCATTGGAAAGAAACGTTCTCACCTTGGGCTGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACACACTGTGCCAGAGAAAGGGACTaGAGGGTGAACAGAAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KGLRFDESFSPTIPITHCARERD*RVNRSL Trigger: GAGGCTTCTGTTCACCCTCAAGTCCCTTTCTCTGGC...ACAGTGTGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | AAAGACTCTGCCAGACAGTCCATGTTCCCAGAAGAATaGGTCGACATTGACTTCTCCAGCAATGGCAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: KDSARQSMFPEE*VDIDFSSNGSM Trigger: CATGCTGCCATTGCTGGAGAAGTCAATGTCGACTCATTCTTCTGGGAACATGGACTGTCTGGCAGAGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR GCA 72 bp | AAGGACCTGCCCTATTTCACAATGGGGAAAGTAGGGTaGACTTATGAACTGCCGACCATGTTTGGTAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: KDLPYFTMGKVG*TYELPTMFGKP Trigger: GGGTTTACCAAACATGGTCGGCAGTTCATAAGTGCACCCTACTTTCCCCATTGTGAAATAGGGCAGGTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | CATCCTGTGCTCCCAGCACTCAGTTCAAGGATAGCCTaGTCTACAAAGAAAGAACCTGTCTCAAACAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HPVLPALSSRIA*STKKEPVSNSV Trigger: GACACTGTTTGAGACAGGTTCTTTCTTTGTAGACCAGGCTATCCTTGAACTGAGTGCTGGGAGCACAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | TTCCCAGCTGTTGCACAGATGTCAGCATCGATCCTTTaGAGTCTAAGCTTCTTCTGGCTGACACATCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FPAVAQMSASIL*SLSFFWLTHQS Trigger: AGACTGATGTGTCAGCCAGAAGAAGCTTAGACTCCAAAGGATCGATGCTGACATCTGTGCAACAGCTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGATAGCCTGGTCTACAAAGAAAGAACCTGTCTCAAACAGTGTCATCATGCAGCAAGTCTGCTACCTTaGAGGAGTCTGTACCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KDSLVYKERTCLKQCHHAASLLP*RSLYLA Trigger: AGCCAGGTACAGACTCCTCAAAGGTAGCAGACTTGC...TGCATGATGACACTGTTTGAGACAGGTTCTTTCTTTGTAGACCAGGCTATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | AGTACAGGTCTGCAAAGGGACAGCTTCCTCTCCACCTaGACAAGGAATGCCACAAAAGCTTTAGAACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: STGLQRDSFLST*TRNATKALEQK Trigger: CTTCTGTTCTAAAGCTTTTGTGGCATTCCTTGTTCAGGTGGAGAGGAAGCTGTCCCTTTGCAGACCTGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | ATGTCAGCATCGATCCTTTGGAGTCTAAGCTTCTTCTaGCTGACACATCAGTCTAAGCATCTCGGAGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: MSASILWSLSFF*LTHQSKHLGES Trigger: GCTTTCTCCGAGATGCTTAGACTGATGTGTCAGCCAGAAGAAGCTTAGACTCCAAAGGATCGATGCTGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | TCACAGTCAGCCCAAGGTGAGAACGTTTCTTTCCAATaGTGGATAGCACAGTTCGGCTTCACTTGTACACTT | + |
|
Preference number: 3 (lower is better) Translates to: SQSAQGENVSFQ*WIAQFGFTCTL Trigger: AAGTGTACAAGTGAAGCCGAACTGTGCTATCCACCATTGGAAAGAAACGTTCTCACCTTGGGCTGACTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | TCCCATAACACACTGTACATCACAGTCAGCCCAAGGTaGGAACGTTTCTTTCCAATGGTGGATAGCACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SHNTLYITVSPR*ERFFPMVDSTV Trigger: AACTGTGCTATCCACCATTGGAAAGAAACGTTCTCACCTTGGGCTGACTGTGATGTACAGTGTGTTATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | CAATCATGCTATAATTCACACTCAGGGGAAAGTCACTaGCAGAGGGGTCATAACATACACGGGATCAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QSCYNSHSGESH*QRGHNIHGIKA Trigger: TGCTTTGATCCCGTGTATGTTATGACCCCTCTGTCAGTGACTTTCCCCTGAGTGTGAATTATAGCATGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | AGTGTCCACAGAGCAAGGAAAAAGTCATCACGTGGTTaGTTTCCAAAGCACATAGAGACCTCACACAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: SVHRARKKSSRG*FPKHIETSHKC Trigger: ACATTTGTGTGAGGTCTCTATGTGCTTTGGAAACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | ATAACATACACGGGATCAAAGCAAGGGACTCAGATTTaGCGAAAGCTTCAGCCCAACAATTCCCATAACACA | + |
|
Preference number: 3 (lower is better) Translates to: ITYTGSKQGTQI*RKLQPNNSHNT Trigger: TGTGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTTGCTTTGATCCCGTGTATGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | AAATCTAAGACTTTTGGCATACAACTACATCAGTTGTaGAAGCAAGCAAAGACTCTGCCAGACAGTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: KSKTFGIQLHQL*KQAKTLPDSPC Trigger: ACATGGACTGTCTGGCAGAGTCTTTGCTTGCTTCCACAACTGATGTAGTTGTATGCCAAAAGTCTTAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | AATGGACACAGACAGAGCCAGTGCTTGTACTGTTTATaGACACAACAGCTGACAAACAAATATACAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: NGHRQSQCLYCL*TQQLTNKYTET Trigger: CGTTTCTGTATATTTGTTTGTCAGCTGTTGTGTTCATAAACAGTACAAGCACTGGCTCTGTCTGTGTCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR GCA 72 bp | CTTAGTTGTAACAATCATCAAAATACTATAGGATTCTaGCTTTTTCCCGTTCTTCCTGGGCTGTCTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LSCNNHQNTIGF*LFPVLPGLSPV Trigger: AACTGGAGACAGCCCAGGAAGAACGGGAAAAAGGCAGAATCCTATAGTATTTTGATGATTGTTACAACTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR TCA 72 bp | ATGGGCAGAAAATATGATACTTCTTATACAGGAGGCTaGAACAGGACAAAACTGAGATTAGACTTCACGTAC | + |
|
Preference number: 3 (lower is better) Translates to: MGRKYDTSYTGG*NRTKLRLDFTY Trigger: GTACGTGAAGTCTAATCTCAGTTTTGTCCTGTTTCAGCCTCCTGTATAAGAAGTATCATATTTTCTGCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CCA 72 bp | TTCGAAACTGGAAAAATAGATTCTGAAACCAGGTACTaGAAACACAATATAAGTTCAGCTTTCCTGAACATG | + |
|
Preference number: 3 (lower is better) Translates to: FETGKIDSETRY*KHNISSAFLNM Trigger: CATGTTCAGGAAAGCTGAACTTATATTGTGTTTCCAGTACCTGGTTTCAGAATCTATTTTTCCAGTTTCGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTGCCAGAAGGGCTCTCCGCCCACAGTACCTCCTGGCACCCAGCGACACAGCCCCTCCAGCGCGGCTaGAGGCGATGTCATAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPEGLSAHSTSWHPATQPLQRG*RRCHRP Trigger: AGGTCTATGACATCGCCTTCAGCCGCGCTGGAGGGG...CTGTGTCGCTGGGTGCCAGGAGGTACTGTGGGCGGAGAGCCCTTCTGGCAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | CCACCAGACATCACGCTGCTGCCAGAAGGGCTCTCCGCCCACAGTACCTCCTGGGCAAGCACTCCAGCCTaGTCTCTGTTTCACCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: PPDITLLPEGLSAHSTSWASTPA*SLFHQP Trigger: GGGTTGGTGAAACAGAGACCAGGCTGGAGTGCTTGC...CCAGGAGGTACTGTGGGCGGAGAGCCCTTCTGGCAGCAGCGTGATGTCTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 72 bp | GTTGGTGAGTCAGTAGACTTCAGAGCACCAGCGCAGTaGTCAACTCCCGGTCAGGGGTCAGGGCTGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGESVDFRAPAQ*STPGQGSGLCP Trigger: GGGGCACAGCCCTGACCCCTGACCGGGAGTTGACAACTGCGCTGGTGCTCTGAAGTCTACTGACTCACCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCCAGAAGGGCTCTCCGCCCACAGTACCTCCTGGCACCCAGCGACACAGATAGTCACCACTTGTTaGCAGGAGGTCTGGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPEGLSAHSTSWHPATQIVTTC*QEVWID Trigger: GTCTATCCAGACCTCCTGGCAACAAGTGGTGACTAT...CTGTGTCGCTGGGTGCCAGGAGGTACTGTGGGCGGAGAGCCCTTCTGGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | ATAGGAAGTCCCCACCGACTTGTCTCATGTCACTCTCCTCCTCAAGCCCAGCCTGTGGCAGGACGAGTGTaGGGCCCAGGCAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IGSPHRLVSCHSPPQAQPVAGRV*GPGNAI Trigger: AATGGCATTGCCTGGGCCCCACACTCGTCCTGCCAC...AGGCTGGGCTTGAGGAGGAGAGTGACATGAGACAAGTCGGTGGGGACTTCCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR TCA 90 bp | GGGAGAAAGAGAGAATGTAGATGGCTCGAGGTGAACAAGATTGGAGACGTGAGAGCGATCCAGTCAGGCTaGGTGGAGGCCCACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GRKRECRWLEVNKIGDVRAIQSG*VEAHCT Trigger: TGTGCAGTGGGCCTCCACTCAGCCTGACTGGATCGC...TCTCACGTCTCCAATCTTGTTCACCTCGAGCCATCTACATTCTCTCTTTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | CGGAGGTCAGGAAAGGGATCAATCTCCAGTGGGGACAGCGCAAGCCCACAAAAGAGCTGGGTCTTCACATaGCCAGACACGAGATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RRSGKGSISSGDSASPQKSWVFT*PDTRFT Trigger: AGTGAATCTCGTGTCTGGCCATGTGAAGACCCAGCT...CTTTTGTGGGCTTGCGCTGTCCCCACTGGAGATTGATCCCTTTCCTGACCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 72 bp | ACAGGGTACTCAACTAGTGAAGCCAGAGAAAGGGACTaGAGGGTGAACAGAAGCCTCCTGCATCTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGYSTSEARERD*RVNRSLLHLLG Trigger: GCCCAGGAGATGCAGGAGGCTTCTGTTCACCCTCAAGTCCCTTTCTCTGGCTTCACTAGTTGAGTACCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCACTTGTACACTTCCCAGCTGTTGCACAGATGTCAGCATCGATCCTTTGGATGGCCCGAGGCATCTaGTGGATGTCCCAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVHFPAVAQMSASILWMARGI*WMSQMR Trigger: CCTCATCTGGGACATCCAGCAGATGCCTCGGGCCAT...CCAAAGGATCGATGCTGACATCTGTGCAACAGCTGGGAAGTGTACAAGTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCACAGGGTACTCAACTAGTGAAGCCAGAGAAAGGGACTTGAGGGTGAACGTGGTAGGGTACGGGTaGTCAAAGGTGTTTCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPTGYSTSEARERDLRVNVVGYG*SKVFRQ Trigger: TTGCCGAAACACCTTTGACCACCCGTACCCTACCAC...GTTCACCCTCAAGTCCCTTTCTCTGGCTTCACTAGTTGAGTACCCTGTGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAACCTGCAAGCAGCTCAGCAGATTATAAACAGCCACCCTCTCCTAGACCATCCCAGATGAGGGCCTaGTGGTCATCCGCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KKPASSSADYKQPPSPRPSQMRA*WSSAAV Trigger: TACTGCAGCGGATGACCATCAGGCCCTCATCTGGGA...TGGTCTAGGAGAGGGTGGCTGTTTATAATCTGCTGAGCTGCTTGCAGGTTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTGACAAGTGTCCACAGAGCAAGGAAAAAGTCATCACGTGGTTGGTTTCCAGCACGCTCCAGTTCATaGCGTACACAGTCCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLTSVHRARKKSSRGWFPARSSS*RTQSRA Trigger: CGCCCTGGACTGTGTACGCCATGAACTGGAGCGTGC...TGGAAACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACTTGTCAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTTTAACAGAGCTGTGCTTCAGGGAAGAGAGCAGACTTATGGACTTCGCCCGAGGCATCTGCTaGATGTCCCAGATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FETLTELCFREESRLMDFARGIC*MSQMRA Trigger: GGCCCTCATCTGGGACATCCAGCAGATGCCTCGGGC...GAAGTCCATAAGTCTGCTCTCTTCCCTGAAGCACAGCTCTGTTAAAGTTTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCACTTGTACACTTCCCAGCTGTTGCACAGATGTCAGCATCGATCCTTTGGCTAGTCCCCAGATGGTaGACGTTGTGTCAATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVHFPAVAQMSASILWLVPRW*TLCQCL Trigger: CAAGCATTGACACAACGTGCACCATCTGGGGACTAG...CCAAAGGATCGATGCTGACATCTGTGCAACAGCTGGGAAGTGTACAAGTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGGTACTCAACTAGTGAAGCCAGAGAAAGGGACTTGAGGGTGAACAGAAGCCAGGGGGTGGTGCTGTaGGTCTTCATAAATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGYSTSEARERDLRVNRSQGVVL*VFINDG Trigger: ACCATCATTTATGAAGACCCACAGCACCACCCCCTG...GCTTCTGTTCACCCTCAAGTCCCTTTCTCTGGCTTCACTAGTTGAGTACCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTTTAACAGAGCTGTGCTTCAGGGAAGAGAGCAGACTTATGGACTTCCCTCCATCCCGTCCATaGCCATGGTGGCCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FETLTELCFREESRLMDFPPSRP*PWWPGS Trigger: ACTACCTGGCCACCATGGCCATGGACGGGATGGAGG...GAAGTCCATAAGTCTGCTCTCTTCCCTGAAGCACAGCTCTGTTAAAGTTTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGTGTCCACAGAGCAAGGAAAAAGTCATCACGTGGTTGGTTTCCAAAGCACTCCAGTCAGGCTGAGTaGAGGCCCACTGCACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSVHRARKKSSRGWFPKHSSQAE*RPTAHC Trigger: ACAATGTGCAGTGGGCCTCCACTCAGCCTGACTGGA...GTGCTTTGGAAACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 72 bp | CTTCCCAGCTGTTGCACAGATGTCAGCATCGATCCTTaGGAGTCTAAGCTTCTTCTGGCTGACACATCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSCCTDVSIDP*ESKLLLADTSV Trigger: GACTGATGTGTCAGCCAGAAGAAGCTTAGACTCCAAAGGATCGATGCTGACATCTGTGCAACAGCTGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTGACAAGTGTCCACAGAGCAAGGAAAAAGTCATCACGTGGTTGGTTTCCACCCACTGCACATTGTTaGTCTCTCCCTCAGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLTSVHRARKKSSRGWFPPTAHC*SLPQLC Trigger: ACACAGCTGAGGGAGAGATCAACAATGTGCAGTGGG...TGGAAACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACTTGTCAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 72 bp | TTCTTTCCAATGGTGGATAGCACAGTTCGGCTTCACTaGTACACTTCCCAGCTGTTGCACAGATGTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFPMVDSTVRLH*YTSQLLHRCQH Trigger: ATGCTGACATCTGTGCAACAGCTGGGAAGTGTACAAGTGAAGCCGAACTGTGCTATCCACCATTGGAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACAGTGCTATGTTCCAGATaGCGGAGGTCAAACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSKGLRFDESFSPTIPITVLCSR*RRSNIL Trigger: GAGAATGTTTGACCTCCGCCATCTGGAACATAGCAC...TGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTTGCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CCA 90 bp | AAGGATAGCCTGGTCTACAAAGAAAGAACCTGTCTCAAACAGTGTCATCATGCATTGACACATGCTCGGTaGTTGTTTAGCCTAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: KDSLVYKERTCLKQCHHALTHAR*LFSLAT Trigger: GGTTGCTAGGCTAAACAACCACCGAGCATGTGTCAA...TGCATGATGACACTGTTTGAGACAGGTTCTTTCTTTGTAGACCAGGCTATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 72 bp | AAGTGTCCACAGAGCAAGGAAAAAGTCATCACGTGGTaGGTTTCCAAAGCACATAGAGACCTCACACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KCPQSKEKVITW*VSKAHRDLTQM Trigger: CATTTGTGTGAGGTCTCTATGTGCTTTGGAAACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 72 bp | CCAAGGAGAAATACCCTGACTGAAAAGGCCTTTCCTTaGGGACAAGGTCCTAATATAGTGAATCTAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: PRRNTLTEKAFP*GQGPNIVNLNL Trigger: TAGATTTAGATTCACTATATTAGGACCTTGTCCCAAAGGAAAGGCCTTTTCAGTCAGGGTATTTCTCCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 72 bp | AAACAGAAACACAGAAGCTTAGCTGAGAGATCTCTCTaGCCTATCATTCAAGTTCGAAACTGGAAAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQKHRSLAERSL*PIIQVRNWKNR Trigger: TCTATTTTTCCAGTTTCGAACTTGAATGATAGGCAAGAGAGATCTCTCAGCTAAGCTTCTGTGTTTCTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| 3UTR CAA 72 bp | CAAGGTCCTAATATAGTGAATCTAAATCTAAGACTTTaGGCATACAACTACATCAGTTGTGGAAGCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGPNIVNLNLRL*AYNYISCGSKQ Trigger: TTGCTTGCTTCCACAACTGATGTAGTTGTATGCCAAAAGTCTTAGATTTAGATTCACTATATTAGGACCTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS CCA 90 bp | CCAGCGCCAGGCGAAAGCGCTTGTCCGGCCGCACGCTCCAGTTCATaGCGTACACAGTCCAGGGCGCTTCATATTTGTAGATCTCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPGESACPAARSSS*RTQSRALHICRSPS Trigger: GGAAGGAGATCTACAAATATGAAGCGCCCTGGACTGTGTACGCCATGAACTGGAGCGTGCGGCCGGACAAGCGCTTTCGCCTGGCGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS GCA 90 bp | CTAAACCAACAAGCTGAACCTTGTTGTTGTACTCTTCCACGAAGCTaGCCAGCGCCAGGCGAAAGCGCTTGTCCGGCCGCACGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LNQQAEPCCCTLPRS*PAPGESACPAARSS Trigger: ACTGGAGCGTGCGGCCGGACAAGCGCTTTCGCCTGGCGCTGGGCAGCTTCGTGGAAGAGTACAACAACAAGGTTCAGCTTGTTGGTTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS CCA 90 bp | CAGGACGAGTGTGGGGCCCAGGCAATGCCATTGACACATGCTCGGTaGTTGTTTAGCCTAGCAACCGGTGTGCAGGGAACTCGAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: QDECGAQAMPLTHAR*LFSLATGVQGTRTS Trigger: GGATGTTCGAGTTCCCTGCACACCGGTTGCTAGGCTAAACAACCACCGAGCATGTGTCAATGGCATTGCCTGGGCCCCACACTCGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CAA 90 bp | GAGGTCAGGAAAGGGATCAATCTCCAGTGGGGACAGCGCAAGCCCACAAAAGCCGCCCAGGCAATGCCATaGACACATGCTCGGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVRKGINLQWGQRKPTKAAQAMP*THARWL Trigger: CAACCACCGAGCATGTGTCAATGGCATTGCCTGGGC...GGCTTTTGTGGGCTTGCGCTGTCCCCACTGGAGATTGATCCCTTTCCTGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS GCA 90 bp | TGGGTCTTCACATGGCCAGACACGAGATTCACTCGTCCCAGCACTTaGCCGGTCTCTAGTCCCCAGATGGTGCACGTTGTGTCAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WVFTWPDTRFTRPST*PVSSPQMVHVVSML Trigger: AAGCATTGACACAACGTGCACCATCTGGGGACTAGAGACCGGGCAAGTGCTGGGACGAGTGAATCTCGTGTCTGGCCATGTGAAGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CAA 90 bp | CAATCATCAAAATACTATAGGATTCTGCCTTTTTCCCGTTCTTCCTGGGCTGTCGCCAGGCGAAAGCGCTaGTCCGGCCGCACGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QSSKYYRILPFSRSSWAVARRKR*SGRTLQ Trigger: CTGGAGCGTGCGGCCGGACAAGCGCTTTCGCCTGGC...GACAGCCCAGGAAGAACGGGAAAAAGGCAGAATCCTATAGTATTTTGATGATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CAA 90 bp | GATGGGCCAGTGTCCCACCAGGTAGAGGAGACTCAGCAAACAGAAACACAGAAGGAGGCCCACTGCACATaGTTGATCTCTCCCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DGPVSHQVEETQQTETQKEAHCT*LISPSA Trigger: AGCTGAGGGAGAGATCAACAATGTGCAGTGGGCCTC...CTTCTGTGTTTCTGTTTGCTGAGTCTCCTCTACCTGGTGGGACACTGGCCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS GCA 90 bp | CTCTGTTTCACCAACCCTCCACACACGGAGATAGTCACCACTTGTTaGCAGGAGGTCTGGATAGACGCCCTTTGTGTCAGGAATCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LCFTNPPHTEIVTTC*QEVWIDALCVRNPH Trigger: ATGTGGATTCCTGACACAAAGGGCGTCTATCCAGACCTCCTGGCAACAAGTGGTGACTATCTCCGTGTGTGGAGGGTTGGTGAAACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS GCA 90 bp | GATTCACTCGTCCCAGCACTTGCCCGGTCTCTAGTCCCCAGATGGTaGACGTTGTGTCAATGCTTGAGGTACCTAGAAGATAAGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSLVPALARSLVPRW*TLCQCLRYLEDKDP Trigger: TGGATCCTTATCTTCTAGGTACCTCAAGCATTGACACAACGTGCACCATCTGGGGACTAGAGACCGGGCAAGTGCTGGGACGAGTGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS CCA 90 bp | AACCCTCCACACACGGAGATAGTCACCACTTGTTGCCAGGAGGTCTaGATAGACGCCCTTTGTGTCAGGAATCCACATGAGCTTTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NPPHTEIVTTCCQEV*IDALCVRNPHELCG Trigger: ACCACAAAGCTCATGTGGATTCCTGACACAAAGGGCGTCTATCCAGACCTCCTGGCAACAAGTGGTGACTATCTCCGTGTGTGGAGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS CCA 90 bp | CGAGATTCACTCGTCCCAGCACTTGCCCGGTCTCTAGTCCCCAGATaGTGCACGTTGTGTCAATGCTTGAGGTACCTAGAAGATAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RDSLVPALARSLVPR*CTLCQCLRYLEDKD Trigger: ATCCTTATCTTCTAGGTACCTCAAGCATTGACACAACGTGCACCATCTGGGGACTAGAGACCGGGCAAGTGCTGGGACGAGTGAATCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTACTCAACTAGTGAAGCCAGAGAAAGGGACTTGAGGGTGAACAGAAGCGATAGTCACCACTTGTaGCCAGGAGGTCTGGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGYSTSEARERDLRVNRSDSHHL*PGGLDR Trigger: TCTATCCAGACCTCCTGGCAACAAGTGGTGACTATC...GCTTCTGTTCACCCTCAAGTCCCTTTCTCTGGCTTCACTAGTTGAGTACCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CAA 90 bp | ATAGGAAGTCCCCACCGACTTGTCTCATGTCACTCTCCTCCTCAAGCCCAGCCTAAGTCTGAGTTCTTGTaGTTGTTTAGCAAGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: IGSPHRLVSCHSPPQAQPKSEFL*LFSKHS Trigger: GGAGTGCTTGCTAAACAACAACAAGAACTCAGACTT...AGGCTGGGCTTGAGGAGGAGAGTGACATGAGACAAGTCGGTGGGGACTTCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CAA 90 bp | ACAAGTGTCCACAGAGCAAGGAAAAAGTCATCACGTGGTTGGTTTCCAAAGCACACACATGCTCGGTGGTaGTTTAGCCTAGCAACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSVHRARKKSSRGWFPKHTHARW*FSLATG Trigger: ACCGGTTGCTAGGCTAAACAACCACCGAGCATGTGT...GTGCTTTGGAAACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
||
| CDS-3UTR CAA 90 bp | AAGTTGACAAGTGTCCACAGAGCAAGGAAAAAGTCATCACGTGGTTGGTTTCCAGGAGATAGTCACCACTaGTTGCCAGGAGGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLTSVHRARKKSSRGWFPGDSHH*LPGGLD Trigger: ATCCAGACCTCCTGGCAACAAGTGGTGACTATCTCC...TGGAAACCAACCACGTGATGACTTTTTCCTTGCTCTGTGGACACTTGTCAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS-3UTR CAA 90 bp | GCTTCACTTGTACACTTCCCAGCTGTTGCACAGATGTCAGCATCGATCCTTTGGTCTGAGTTCTTGTTGTaGTTTAGCAAGCACTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ASLVHFPAVAQMSASILWSEFLL*FSKHSS Trigger: GCTGGAGTGCTTGCTAAACAACAACAAGAACTCAGA...CCAAAGGATCGATGCTGACATCTGTGCAACAGCTGGGAAGTGTACAAGTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS-3UTR CAA 90 bp | AAGGGACTCAGATTTGACGAAAGCTTCAGCCCAACAATTCCCATAACACACTGTCCCAGATGGTGCACGTaGTGTCAATGCTTGAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: KGLRFDESFSPTIPITHCPRWCT*CQCLRY Trigger: GTACCTCAAGCATTGACACAACGTGCACCATCTGGG...ACAGTGTGTTATGGGAATTGTTGGGCTGAAGCTTTCGTCAAATCTGAGTCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 72 bp | TCTTCCACGAAGCTGCCCAGCGCCAGGCGAAAGCGCTaGTCCGGCCGCACGCTCCAGTTCATGGCGTACACA | + |
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Preference number: 6 (lower is better) Translates to: SSTKLPSARRKR*SGRTLQFMAYT Trigger: TGTGTACGCCATGAACTGGAGCGTGCGGCCGGACAAGCGCTTTCGCCTGGCGCTGGGCAGCTTCGTGGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 90 bp | TTGTTGTACTCTTCCACGAAGCTGCCCAGCGCCAGGCGAAAGCGCTaGTCCGGCCGCACGCTCCAGTTCATGGCGTACACAGTCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LLYSSTKLPSARRKR*SGRTLQFMAYTVQG Trigger: GCCCTGGACTGTGTACGCCATGAACTGGAGCGTGCGGCCGGACAAGCGCTTTCGCCTGGCGCTGGGCAGCTTCGTGGAAGAGTACAACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS TCA 72 bp | GCCCGAGGCATCTGCTGGATGTCCCAGATGAGGGCCTaGTGGTCATCCGCTGCAGTACAGATGTGGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: ARGICWMSQMRA*WSSAAVQMWQD Trigger: GTCCTGCCACATCTGTACTGCAGCGGATGACCATCAGGCCCTCATCTGGGACATCCAGCAGATGCCTCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS GCA 72 bp | CAAGCTGAACCTTGTTGTTGTACTCTTCCACGAAGCTaGCCAGCGCCAGGCGAAAGCGCTTGTCCGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: QAEPCCCTLPRS*PAPGESACPAA Trigger: TGCGGCCGGACAAGCGCTTTCGCCTGGCGCTGGGCAGCTTCGTGGAAGAGTACAACAACAAGGTTCAGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CCA 72 bp | GTCATCCGCTGCAGTACAGATGTGGCAGGACGAGTGTaGGGCCCAGGCAATGCCATTGACACATGCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: VIRCSTDVAGRV*GPGNAIDTCSV Trigger: CACCGAGCATGTGTCAATGGCATTGCCTGGGCCCCACACTCGTCCTGCCACATCTGTACTGCAGCGGATGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 90 bp | GCAGTACAGATGTGGCAGGACGAGTGTGGGGCCCAGGCAATGCCATaGACACATGCTCGGTGGTTGTTTAGCCTAGCAACCGGTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: AVQMWQDECGAQAMP*THARWLFSLATGVQ Trigger: CTGCACACCGGTTGCTAGGCTAAACAACCACCGAGCATGTGTCAATGGCATTGCCTGGGCCCCACACTCGTCCTGCCACATCTGTACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS TCA 72 bp | CAGAGGCAAACATGTCCCTGCCCCCTCCAGCGCGGCTaGAGGCGATGTCATAGACCTCTTTGTCATGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: QRQTCPCPLQRG*RRCHRPLCHGQ Trigger: TTGCCCATGACAAAGAGGTCTATGACATCGCCTTCAGCCGCGCTGGAGGGGGCAGGGACATGTTTGCCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS GCA 72 bp | ACATGGCCAGACACGAGATTCACTCGTCCCAGCACTTaGCCGGTCTCTAGTCCCCAGATGGTGCACGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TWPDTRFTRPST*PVSSPQMVHVV Trigger: CACAACGTGCACCATCTGGGGACTAGAGACCGGGCAAGTGCTGGGACGAGTGAATCTCGTGTCTGGCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CCA 72 bp | GGCGAAAGCGCTTGTCCGGCCGCACGCTCCAGTTCATaGCGTACACAGTCCAGGGCGCTTCATATTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GESACPAARSSS*RTQSRALHICR Trigger: TCTACAAATATGAAGCGCCCTGGACTGTGTACGCCATGAACTGGAGCGTGCGGCCGGACAAGCGCTTTCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 72 bp | GGGGCCCAGGCAATGCCATTGACACATGCTCGGTGGTaGTTTAGCCTAGCAACCGGTGTGCAGGGAACTCGA | + |
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Preference number: 6 (lower is better) Translates to: GAQAMPLTHARW*FSLATGVQGTR Trigger: TCGAGTTCCCTGCACACCGGTTGCTAGGCTAAACAACCACCGAGCATGTGTCAATGGCATTGCCTGGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 90 bp | GACGAGTGTGGGGCCCAGGCAATGCCATTGACACATGCTCGGTGGTaGTTTAGCCTAGCAACCGGTGTGCAGGGAACTCGAACATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: DECGAQAMPLTHARW*FSLATGVQGTRTSR Trigger: TCTGGATGTTCGAGTTCCCTGCACACCGGTTGCTAGGCTAAACAACCACCGAGCATGTGTCAATGGCATTGCCTGGGCCCCACACTCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CCA 72 bp | TGTGGGGCCCAGGCAATGCCATTGACACATGCTCGGTaGTTGTTTAGCCTAGCAACCGGTGTGCAGGGAACT | + |
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Preference number: 6 (lower is better) Translates to: CGAQAMPLTHAR*LFSLATGVQGT Trigger: AGTTCCCTGCACACCGGTTGCTAGGCTAAACAACCACCGAGCATGTGTCAATGGCATTGCCTGGGCCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 72 bp | ATGTGGCAGGACGAGTGTGGGGCCCAGGCAATGCCATaGACACATGCTCGGTGGTTGTTTAGCCTAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: MWQDECGAQAMP*THARWLFSLAT Trigger: GGTTGCTAGGCTAAACAACCACCGAGCATGTGTCAATGGCATTGCCTGGGCCCCACACTCGTCCTGCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS GCA 72 bp | ACCAACCCTCCACACACGGAGATAGTCACCACTTGTTaGCAGGAGGTCTGGATAGACGCCCTTTGTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TNPPHTEIVTTC*QEVWIDALCVR Trigger: CCTGACACAAAGGGCGTCTATCCAGACCTCCTGGCAACAAGTGGTGACTATCTCCGTGTGTGGAGGGTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CCA 72 bp | CTCGTCCCAGCACTTGCCCGGTCTCTAGTCCCCAGATaGTGCACGTTGTGTCAATGCTTGAGGTACCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: LVPALARSLVPR*CTLCQCLRYLE Trigger: TTCTAGGTACCTCAAGCATTGACACAACGTGCACCATCTGGGGACTAGAGACCGGGCAAGTGCTGGGACGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 72 bp | CACCAACCCTCCACACACGGAGATAGTCACCACTTGTaGCCAGGAGGTCTGGATAGACGCCCTTTGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: HQPSTHGDSHHL*PGGLDRRPLCQ Trigger: CTGACACAAAGGGCGTCTATCCAGACCTCCTGGCAACAAGTGGTGACTATCTCCGTGTGTGGAGGGTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 90 bp | CTCGTCCCAGCACTTGCCCGGTCTCTAGTCCCCAGATGGTGCACGTaGTGTCAATGCTTGAGGTACCTAGAAGATAAGGATCCACCTCGT | + |
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Preference number: 6 (lower is better) Translates to: LVPALARSLVPRWCT*CQCLRYLEDKDPPR Trigger: ACGAGGTGGATCCTTATCTTCTAGGTACCTCAAGCATTGACACAACGTGCACCATCTGGGGACTAGAGACCGGGCAAGTGCTGGGACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS GCA 72 bp | GTCCCAGCACTTGCCCGGTCTCTAGTCCCCAGATGGTaGACGTTGTGTCAATGCTTGAGGTACCTAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: VPALARSLVPRW*TLCQCLRYLED Trigger: ATCTTCTAGGTACCTCAAGCATTGACACAACGTGCACCATCTGGGGACTAGAGACCGGGCAAGTGCTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 90 bp | TGGTCTCTGTTTCACCAACCCTCCACACACGGAGATAGTCACCACTaGTTGCCAGGAGGTCTGGATAGACGCCCTTTGTGTCAGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: WSLFHQPSTHGDSHH*LPGGLDRRPLCQES Trigger: GGATTCCTGACACAAAGGGCGTCTATCCAGACCTCCTGGCAACAAGTGGTGACTATCTCCGTGTGTGGAGGGTTGGTGAAACAGAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CCA 72 bp | CACACGGAGATAGTCACCACTTGTTGCCAGGAGGTCTaGATAGACGCCCTTTGTGTCAGGAATCCACATGAG | + |
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Preference number: 6 (lower is better) Translates to: HTEIVTTCCQEV*IDALCVRNPHE Trigger: CTCATGTGGATTCCTGACACAAAGGGCGTCTATCCAGACCTCCTGGCAACAAGTGGTGACTATCTCCGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CCA 72 bp | ACCTCTTTGTCATGGGCAATTAGCTGGGTCTTCACATaGCCAGACACGAGATTCACTCGTCCCAGCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: TSLSWAISWVFT*PDTRFTRPSTC Trigger: GCAAGTGCTGGGACGAGTGAATCTCGTGTCTGGCCATGTGAAGACCCAGCTAATTGCCCATGACAAAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 90 bp | TCTCTGTTTCACCAACCCTCCACACACGGAGATAGTCACCACTTGTaGCCAGGAGGTCTGGATAGACGCCCTTTGTGTCAGGAATCCACA | + |
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Preference number: 6 (lower is better) Translates to: SLFHQPSTHGDSHHL*PGGLDRRPLCQEST Trigger: TGTGGATTCCTGACACAAAGGGCGTCTATCCAGACCTCCTGGCAACAAGTGGTGACTATCTCCGTGTGTGGAGGGTTGGTGAAACAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS GCA 72 bp | CGGTCTCTAGTCCCCAGATGGTGCACGTTGTGTCAATaGTTGAGGTACCTAGAAGATAAGGATCCACCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RSLVPRWCTLCQ*LRYLEDKDPPR Trigger: ACGAGGTGGATCCTTATCTTCTAGGTACCTCAAGCATTGACACAACGTGCACCATCTGGGGACTAGAGACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CAA 72 bp | GCACTTGCCCGGTCTCTAGTCCCCAGATGGTGCACGTaGTGTCAATGCTTGAGGTACCTAGAAGATAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: ALARSLVPRWCT*CQCLRYLEDKD Trigger: ATCCTTATCTTCTAGGTACCTCAAGCATTGACACAACGTGCACCATCTGGGGACTAGAGACCGGGCAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CCA 72 bp | CTGAGTTCTTGTTGTTGTTTAGCAAGCACTCCAGCCTaGTCTCTGTTTCACCAACCCTCCACACACGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: LSSCCCLASTPA*SLFHQPSTHGD Trigger: ATCTCCGTGTGTGGAGGGTTGGTGAAACAGAGACCAGGCTGGAGTGCTTGCTAAACAACAACAAGAACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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| CDS CCA 72 bp | TCAGGAATCCACATGAGCTTTGTGGTAGGGTACGGGTaGTCAAAGGTGTTTCGGCAAATAAACTCTGAACTC | + |
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Preference number: 6 (lower is better) Translates to: SGIHMSFVVGYG*SKVFRQINSEL Trigger: GAGTTCAGAGTTTATTTGCCGAAACACCTTTGACCACCCGTACCCTACCACAAAGCTCATGTGGATTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058438.9 |
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