Pregenerated sensors for DCAF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021222Ensembl transcript IDs: ENSMUST00000021645.9, ENSMUST00000222502.2, ENSMUST00000223291.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTaGATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCA | + |
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Preference number: 1 (lower is better) Translates to: CLTTEPSLQAPGQSL*ILPSEAEGLHLHTA Trigger: TGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| 3UTR TCA 90 bp | TCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTaGGATGGTTGTGAGGTGCCTATTGGTCGATGGGAATTGAACCTG | + |
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Preference number: 1 (lower is better) Translates to: SRRPEEGAGFSGTGV*DGCEVPIGRWELNL Trigger: CAGGTTCAATTCCCATCGACCAATAGGCACCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| 3UTR-3UTR TCA 90 bp | CACGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTCCAGTGCTTAACCACTaGGCCATCTCTCCAGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: HACLPSRRPEEGAGFSGTPVLNH*AISPGP Trigger: GGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGG...AGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGAAGAGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTAGTCGCTTTGCATTCTaGCCTCCGAGGCTGAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LWKSSQCLTTEPSLQAPGSRFAF*PPRLKD Trigger: GTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACT...ACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCTCTTCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| 3UTR TCA 72 bp | CTGGGTCCTCTGGAAGAGCAGCCAGTGCTTAACCACTaGGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LGPLEEQPVLNH*AISPGPRSVAL Trigger: CAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCTCTTCCAGAGGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| 3UTR GCA 72 bp | ACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTaGATTCTGCCCTCCGAGGCTGAAGGACTCCACTTG | + |
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Preference number: 3 (lower is better) Translates to: TEPSLQAPGQSL*ILPSEAEGLHL Trigger: CAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| 3UTR GCA 72 bp | GTGTTTTGCCTGCGTGTTCTATCCATATCCCACGCATaGCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: VFCLRVLSISHA*LPSRRPEEGAG Trigger: TCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTGGGATATGGATAGAACACGCAGGCAAAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTaGGATGGTTGTGAGGTGCCTATTGGTCGATGGGAA | + |
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Preference number: 3 (lower is better) Translates to: PEEGAGFSGTGV*DGCEVPIGRWE Trigger: TTCCCATCGACCAATAGGCACCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| 3UTR TCA 72 bp | GAGATGGTTGTGAGGTGCCTATTGGTCGATGGGAATTaGACCTGGGTCCTCTGGAAGAGCAGCCAGTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: EMVVRCLLVDGN*TWVLWKSSQCL Trigger: TAAGCACTGGCTGCTCTTCCAGAGGACCCAGGTTCAATTCCCATCGACCAATAGGCACCTCACAACCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGCCTGCTGGACGGCCATaGGCAGCCCTGGGGCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RMPAVKEARRGGWILWNWPAGRP*AALGRP Trigger: GGGGCGCCCCAGGGCTGCTCATGGCCGTCCAGCAGG...CCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCACCTGCTGGACGGCCATaGGCAGCCCTGGGGCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QSLCILPSEAEGLHLHTAPAGRP*AALGRP Trigger: GGGGCGCCCCAGGGCTGCTCATGGCCGTCCAGCAGG...TGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CACGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGGAGGGTATGGTTCTaGGCAGGCGGGCATCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: HACLPSRRPEEGAGFSGTGRVWF*AGGHRG Trigger: TCCACGATGCCCGCCTGCTCAGAACCATACCCTCCC...AGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | GAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTTCACTGGAATCACACTaGCCCAGGGCAGGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: EPSLQAPGQSLCILPSEASLESH*PRAGLW Trigger: CCAGAGCCCTGCCCTGGGGCAGTGTGATTCCAGTGA...AGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CCA 90 bp | CACGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTAAGCGGGGAGCAAGGTaGCACAGCCTGGCGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HACLPSRRPEEGAGFSGTKRGAR*HSLASL Trigger: CAGAGACGCCAGGCTGTGCCACCTTGCTCCCCGCTT...AGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGGGGTTGCAGTTGTTGTaGCCCGGGAGCAAACGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LSHLSRPQVSRFAFCPPRGLQLL*PGSKRK Trigger: CTTCCGTTTGCTCCCGGGTCACAACAACTGCAACCC...CCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | CGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGTGCATGTCCTCTTGCTaGAGCAGCTGCAGCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RMPAVKEARRGGWILWNWCMSSC*SSCSLL Trigger: CAGGAGGCTGCAGCTGCTGCAGCAAGAGGACATGCA...CCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | GAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGGGGCCTTGAGACCCTaGAGGTTGATGATGCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EPSLQAPGQSLCILPSEAGALRP*RLMMPY Trigger: GTACGGCATCATCAACCTGCAGGGTCTCAAGGCCCC...AGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | CAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACGGGGCCTTGAGACCCTaGAGGTTGATGATGCCGTAC | + |
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Preference number: 4 (lower is better) Translates to: QAPGQSLCILPSEAEGLHGALRP*RLMMPY Trigger: GTACGGCATCATCAACCTGCAGGGTCTCAAGGCCCC...GTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCAAGCGGGGAGCAAGGTaGCACAGCCTGGCGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SQCLTTEPSLQAPGQSLCKRGAR*HSLASL Trigger: CAGAGACGCCAGGCTGTGCCACCTTGCTCCCCGCTT...GCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CCA 90 bp | CGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGGTTGGCCTTGGAGGTTaGGCATGGGGAGGGTATGGT | + |
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Preference number: 4 (lower is better) Translates to: RMPAVKEARRGGWILWNWVGLGG*AWGGYG Trigger: ACCATACCCTCCCCATGCCCAACCTCCAAGGCCAAC...CCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CCA 90 bp | CGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGTGGGAATGTTGGCCTTaGAGGTTGGGCATGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RMPAVKEARRGGWILWNWWECWP*RLGMGR Trigger: CCTCCCCATGCCCAACCTCCAAGGCCAACATTCCCA...CCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | GAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGTTACTGACAAACAGTaGAGCGGGGAGCAAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EPSLQAPGQSLCILPSEAVTDKQ*SGEQGG Trigger: GCCACCTTGCTCCCCGCTTCACTGTTTGTCAGTAAC...AGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACGGTGTTGCTCCTCCTTaGAGACCTGCACAGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: QAPGQSLCILPSEAEGLHGVAPP*RPAQRS Trigger: TGACCTCTGTGCAGGTCTTCAAGGAGGAGCAACACC...GTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGGGTGTTGCTCCTCCTTaGAGACCTGCACAGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RMPAVKEARRGGWILWNWGVAPP*RPAQRS Trigger: TGACCTCTGTGCAGGTCTTCAAGGAGGAGCAACACC...CCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | GGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTGAGATGGTTGTGAGGGGGAGGGTATGGTTCTaGGCAGGCGGGCATCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GQKRGLDSLELESEMVVRGRVWF*AGGHRG Trigger: TCCACGATGCCCGCCTGCTCAGAACCATACCCTCCC...CCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | AGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTCACTGGAATCACACTaGCCCAGGGCAGGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSQCLTTEPSLQAPGQSLSLESH*PRAGLW Trigger: CCAGAGCCCTGCCCTGGGGCAGTGTGATTCCAGTGA...AAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | CTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGTTCTGCATGTCCTCTTaGTGCAGCAGCTGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LSHLSRPQVSRFAFCPPRFCMSS*CSSCSL Trigger: GAGGCTGCAGCTGCTGCAGCAAGAGGACATGCAGAA...CCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCACAGCCTGGCGTCTCTaGAAGGCCCATGAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SQCLTTEPSLQAPGQSLCTAWRL*KAHEAQ Trigger: CTGTGCCTCATGGGCCTTGCAGAGACGCCAGGCTGT...GCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | CTCTGGAAGAGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTACAGCCTGGCGTCTCTaGAAGGCCCATGAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: LWKSSQCLTTEPSLQAPGTAWRL*KAHEAQ Trigger: CTGTGCCTCATGGGCCTTGCAGAGACGCCAGGCTGT...ACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCTCTTCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | GGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTGAGATGGTTGTGAGGGCAGTCTTGGCCCACTaGCACCAGGATCCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GQKRGLDSLELESEMVVRAVLAH*HQDPFL Trigger: GAGGAAGGGATCCTGGTGGCAGTGGGCCAAGACTGC...CCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | CCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATAAGGGAGCTCCCACCTaGCCTCCTCCTGACTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PGQSLCILPSEAEGLHLHKGAPT*PPPDCL Trigger: CAGACAGTCAGGAGGAGGGCAGGTGGGAGCTCCCTT...ATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | AGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTTCCAGCCCTTGGCTTaGCTTGGAGAACGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSQCLTTEPSLQAPGQSLFQPLA*LGERRS Trigger: TGACCTGCGTTCTCCAAGTCAAGCCAAGGGCTGGAA...AAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGCACAGAGGTCACGGCTaGGTCATGGAAAATTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RMPAVKEARRGGWILWNWHRGHG*VMENLG Trigger: ACCCAAATTTTCCATGACTCAGCCGTGACCTCTGTG...CCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCACACCTGCCCTCCTCCTaGCTGTCTGGACAAGACGAG | + |
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Preference number: 4 (lower is better) Translates to: RFAFCPPRLKDSTCIQQAHLPSS*LSGQDE Trigger: CTCGTCTTGTCCAGACAGTCAGGAGGAGGGCAGGTG...TGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | AGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTTCTGCATGTCCTCTTaGTGCAGCAGCTGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SSQCLTTEPSLQAPGQSLFCMSS*CSSCSL Trigger: GAGGCTGCAGCTGCTGCAGCAAGAGGACATGCAGAA...AAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | CGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCAGCAGTCTTGGCCCACTaGCACCAGGATCCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RFAFCPPRLKDSTCIQQAAVLAH*HQDPFL Trigger: GAGGAAGGGATCCTGGTGGCAGTGGGCCAAGACTGC...TGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | CGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCAAAGGGAGCTCCCACCTaGCCTCCTCCTGACTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RFAFCPPRLKDSTCIQQAKGAPT*PPPDCL Trigger: CAGACAGTCAGGAGGAGGGCAGGTGGGAGCTCCCTT...TGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CCA 90 bp | GAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGACTCAGCATCATGGTaGCCAGAATCTTGTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: EPSLQAPGQSLCILPSEADSASW*PESCEL Trigger: GAGCTCACAAGATTCTGGCCACCATGATGCTGAGTC...AGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CCA 90 bp | CTCTGGAAGAGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTACTCTCCAGTTCTGCTaGACGAGGTTGACGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: LWKSSQCLTTEPSLQAPGTLQFC*TRLTGT Trigger: AGTCCCCGTCAACCTCGTCCAGCAGAACTGGAGAGT...ACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCTCTTCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CCA 90 bp | AGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTGAGAGAAGGCCACACTaGGAATGTTGGCCTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SSQCLTTEPSLQAPGQSLERRPH*ECWPWR Trigger: CCTCCAAGGCCAACATTCCCAGTGTGGCCTTCTCTC...AAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTGGGTTGCAGTTGTTGTaGCCCGGGAGCAAACGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QCLTTEPSLQAPGQSLCIGLQLL*PGSKRK Trigger: CTTCCGTTTGCTCCCGGGTCACAACAACTGCAACCC...AATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | CCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATTTCCAGCCCTTGGCTTaGCTTGGAGAACGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PGQSLCILPSEAEGLHLHFQPLA*LGERRS Trigger: TGACCTGCGTTCTCCAAGTCAAGCCAAGGGCTGGAA...ATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR TCA 90 bp | TTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCACCACACCTGCCCTCCTCCTaGCTGTCTGGACAAGACGAG | + |
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Preference number: 4 (lower is better) Translates to: FAFCPPRLKDSTCIQQAPHLPSS*LSGQDE Trigger: CTCGTCTTGTCCAGACAGTCAGGAGGAGGGCAGGTG...TGGTGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR GCA 90 bp | CACGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTCTCTCCATCTCCTTTTaGTGGATGCCCTCCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HACLPSRRPEEGAGFSGTLSISF*WMPSFV Trigger: CACAAAGGAGGGCATCCAGCAAAAGGAGATGGAGAG...AGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCGGGGACTCAGCATCATaGTGGCCAGAATCTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQCLTTEPSLQAPGQSLCGDSAS*WPESCE Trigger: CTCACAAGATTCTGGCCACCATGATGCTGAGTCCCC...GCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTGAGATGGTTGTGAGGGTCCTGTCACCACATTaGTCAAGAGGACCCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQKRGLDSLELESEMVVRVLSPH*SRGPSE Trigger: CTCGGAGGGTCCTCTTGACCAATGTGGTGACAGGAC...CCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CACGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTCTCGTGCATATGCAGTaGCAGGTAGGCGTACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HACLPSRRPEEGAGFSGTLVHMQ*QVGVLI Trigger: AATGAGTACGCCTACCTGCCACTGCATATGCACGAG...AGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAGTTGGCCTTGGAGGTTaGGCATGGGGAGGGTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSLCILPSEAEGLHLHTAVGLGG*AWGGYG Trigger: ACCATACCCTCCCCATGCCCAACCTCCAAGGCCAAC...TGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCATGGGAATGTTGGCCTTaGAGGTTGGGCATGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLCILPSEAEGLHLHTAWECWP*RLGMGR Trigger: CCTCCCCATGCCCAACCTCCAAGGCCAACATTCCCA...TGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTGTGGCCAGAATCTTGTaGGCTCTGAGATGCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCLTTEPSLQAPGQSLCIVARIL*ALRCPC Trigger: ACAGGGGCATCTCAGAGCTCACAAGATTCTGGCCAC...AATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATAGTGGCCAGAATCTTGTaGGCTCTGAGATGCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVSRFAFCPPRLKDSTCIVARIL*ALRCPC Trigger: ACAGGGGCATCTCAGAGCTCACAAGATTCTGGCCAC...TATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAGTTACTGACAAACAGTaGAGCGGGGAGCAAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLCILPSEAEGLHLHTAVTDKQ*SGEQGG Trigger: GCCACCTTGCTCCCCGCTTCACTGTTTGTCAGTAAC...TGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAGACAAACCTGTACTaGAGCAGTTATTTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EPSLQAPGQSLCILPSEAETNLY*SSYLPG Trigger: TCCAGGCAAATAACTGCTTCAGTACAGGTTTGTCTC...AGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGGCGTACTCATTCACATaGCCTTCATACTGTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLSRPQVSRFAFCPPRAYSFT*PSYCLT Trigger: TGTGAGACAGTATGAAGGTCATGTGAATGAGTACGC...CCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCCTCTCCATCTCCTTTTaGTGGATGCCCTCCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQCLTTEPSLQAPGQSLCLSISF*WMPSFV Trigger: CACAAAGGAGGGCATCCAGCAAAAGGAGATGGAGAG...GCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTGTCCTGTCACCACATTaGTCAAGAGGACCCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCLTTEPSLQAPGQSLCIVLSPH*SRGPSE Trigger: CTCGGAGGGTCCTCTTGACCAATGTGGTGACAGGAC...AATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTGAGAGAAGGCCACACTaGGAATGTTGGCCTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCLTTEPSLQAPGQSLCIERRPH*ECWPWR Trigger: CCTCCAAGGCCAACATTCCCAGTGTGGCCTTCTCTC...AATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATCACAGAGGTCACGGCTaGGTCATGGAAAATTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGQSLCILPSEAEGLHLHHRGHG*VMENLG Trigger: ACCCAAATTTTCCATGACTCAGCCGTGACCTCTGTG...ATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR GCA 90 bp | CACGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGTCACTGGTAGTGTCTaGCATGATGAAGTTAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: HACLPSRRPEEGAGFSGTVTGSV*HDEVKP Trigger: CGGTTTAACTTCATCATGGCAGACACTACCAGTGAC...AGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR GCA 90 bp | CACGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTACTGAAGCAGTTATTTaGCTGGACGTTCAAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: HACLPSRRPEEGAGFSGTTEAVI*LDVQGP Trigger: TGGTCCTTGAACGTCCAGGCAAATAACTGCTTCAGT...AGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTGAGATGGTTGTGAGGGACTCAGCATCATGGTaGCCAGAATCTTGTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQKRGLDSLELESEMVVRDSASW*PESCEL Trigger: GAGCTCACAAGATTCTGGCCACCATGATGCTGAGTC...CCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCAGGGGACTCAGCATCATaGTGGCCAGAATCTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RFAFCPPRLKDSTCIQQAGDSAS*WPESCE Trigger: CTCACAAGATTCTGGCCACCATGATGCTGAGTCCCC...TGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAAGAGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTAAGCAGTTATTTGCCTaGACGTTCAAGGACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWKSSQCLTTEPSLQAPGKQLFA*TFKDQA Trigger: TGCCTGGTCCTTGAACGTCCAGGCAAATAACTGCTT...ACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCTCTTCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTAAGCAGTTATTTGCCTaGACGTTCAAGGACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSQCLTTEPSLQAPGQSLKQLFA*TFKDQA Trigger: TGCCTGGTCCTTGAACGTCCAGGCAAATAACTGCTT...AAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGATAAAATGTCCTCATTaGAAACAGAAGGGAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSHLSRPQVSRFAFCPPRIKCPH*KQKGAP Trigger: GGGAGCTCCCTTCTGTTTCCAATGAGGACATTTTAT...CCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGATAAAATGTCCTCATTaGAAACAGAAGGGAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RMPAVKEARRGGWILWNWIKCPH*KQKGAP Trigger: GGGAGCTCCCTTCTGTTTCCAATGAGGACATTTTAT...CCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCACAGAGCAGAAGGGTCTaGGCTCTGAATCTCTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSLCILPSEAEGLHLHTAQSRRV*ALNLYL Trigger: AAGGTAGAGATTCAGAGCTCAGACCCTTCTGCTCTG...TGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTACTGAAGCAGTTATTTaGCTGGACGTTCAAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSQCLTTEPSLQAPGQSLTEAVI*LDVQGP Trigger: TGGTCCTTGAACGTCCAGGCAAATAACTGCTTCAGT...AAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATGAGTCATGGAAAATTTaGGTAGCCTTCCAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGQSLCILPSEAEGLHLHESWKI*VAFQPL Trigger: CAAGGGCTGGAAGGCTACCCAAATTTTCCATGACTC...ATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTGAGATGGTTGTGAGGGAGTCATGGAAAATTTaGGTAGCCTTCCAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQKRGLDSLELESEMVVRESWKI*VAFQPL Trigger: CAAGGGCTGGAAGGCTACCCAAATTTTCCATGACTC...CCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATGTCACGGCTGAGTCATaGAAAATTTGGGTAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGQSLCILPSEAEGLHLHVTAES*KIWVAF Trigger: GAAGGCTACCCAAATTTTCCATGACTCAGCCGTGAC...ATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTCGTGCATATGCAGTaGCAGGTAGGCGTACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: QCLTTEPSLQAPGQSLCILVHMQ*QVGVLI Trigger: AATGAGTACGCCTACCTGCCACTGCATATGCACGAG...AATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAGAAGGGTCTGAGCTCTaGATCTCTACCTTTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSLCILPSEAEGLHLHTAEGSEL*ISTFFL Trigger: GAGGAAAAAGGTAGAGATTCAGAGCTCAGACCCTTC...TGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATAGTCACGGCTGAGTCATaGAAAATTTGGGTAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVSRFAFCPPRLKDSTCIVTAES*KIWVAF Trigger: GAAGGCTACCCAAATTTTCCATGACTCAGCCGTGAC...TATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTGAGACAAACCTGTACTaGAGCAGTTATTTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QCLTTEPSLQAPGQSLCIETNLY*SSYLPG Trigger: TCCAGGCAAATAACTGCTTCAGTACAGGTTTGTCTC...AATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR TCA 90 bp | CGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCAGCGTACTCATTCACATaGCCTTCATACTGTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RFAFCPPRLKDSTCIQQAAYSFT*PSYCLT Trigger: TGTGAGACAGTATGAAGGTCATGTGAATGAGTACGC...TGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCATGGTCTGTACCTGCTTaGTGGTTACTGACAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RFAFCPPRLKDSTCIQQAWSVPA*WLLTNS Trigger: ACTGTTTGTCAGTAACCACCAAGCAGGTACAGACCA...TGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCATGGTCTGTACCTGCTTaGTGGTTACTGACAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSLCILPSEAEGLHLHTAWSVPA*WLLTNS Trigger: ACTGTTTGTCAGTAACCACCAAGCAGGTACAGACCA...TGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTGAGATGGTTGTGAGGGTAATTTTCTTTTTCTaGATGTCCTCTTGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQKRGLDSLELESEMVVRVIFFF*MSSCCS Trigger: GCTGCAGCAAGAGGACATGCAGAAAAAGAAAATTAC...CCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCACCAGTCACTGGTAGTGTCTaGCATGATGAAGTTAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: FAFCPPRLKDSTCIQQAPVTGSV*HDEVKP Trigger: CGGTTTAACTTCATCATGGCAGACACTACCAGTGAC...TGGTGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CAA 90 bp | CGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGTCGAACGTGGGGGCCTaGAGACCCTGCAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RMPAVKEARRGGWILWNWSNVGA*RPCRLM Trigger: CATCAACCTGCAGGGTCTCAAGGCCCCCACGTTCGA...CCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTTTTCTGCATGTCCTCTaGCTGCAGCAGCTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EPSLQAPGQSLCILPSEAFLHVL*LQQLQP Trigger: AGGCTGCAGCTGCTGCAGCAAGAGGACATGCAGAAA...AGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CAA 90 bp | CACGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTCTTCCAGCCCTTGGCTaGACTTGGAGAACGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HACLPSRRPEEGAGFSGTLPALG*TWRTQV Trigger: GACCTGCGTTCTCCAAGTCAAGCCAAGGGCTGGAAG...AGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCCCGTGTGTAGCAGTCTaGGCCCACTGCCACCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SQCLTTEPSLQAPGQSLCPCVAV*AHCHQD Trigger: ATCCTGGTGGCAGTGGGCCAAGACTGCTACACACGG...GCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGAAGAGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCTGGGAATGTTGGCCTaGGAGGTTGGGCATGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWKSSQCLTTEPSLQAPGLGMLA*EVGHGE Trigger: CTCCCCATGCCCAACCTCCAAGGCCAACATTCCCAG...ACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCTCTTCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCCTGGGAATGTTGGCCTaGGAGGTTGGGCATGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQCLTTEPSLQAPGQSLCLGMLA*EVGHGE Trigger: CTCCCCATGCCCAACCTCCAAGGCCAACATTCCCAG...GCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGGCTCTCCATCTCCTTTaGCTGGATGCCCTCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LSHLSRPQVSRFAFCPPRALHLL*LDALLC Trigger: ACAAAGGAGGGCATCCAGCAAAAGGAGATGGAGAGC...CCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CTCTGGAAGAGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCTTCCAGCCCTTGGCTaGACTTGGAGAACGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LWKSSQCLTTEPSLQAPGLPALG*TWRTQV Trigger: GACCTGCGTTCTCCAAGTCAAGCCAAGGGCTGGAAG...ACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCTCTTCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | AGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTTTCTGCATGTCCTCTaGCTGCAGCAGCTGCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SSQCLTTEPSLQAPGQSLFLHVL*LQQLQP Trigger: AGGCTGCAGCTGCTGCAGCAAGAGGACATGCAGAAA...AAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CACGCATGCCTGCCGTCAAGGAGGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGCCAAGACATCACTGTaGATCCTGTATGACTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: HACLPSRRPEEGAGFSGTAKTSL*ILYDCR Trigger: CCGGCAGTCATACAGGATCAACAGTGATGTCTTGGC...AGTTCCAGAGAATCCAGCCCCCTCTTCTGGCCTCCTTGACGGCAGGCATGCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACCGTGTGTAGCAGTCTaGGCCCACTGCCACCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: QVSRFAFCPPRLKDSTCIPCVAV*AHCHQD Trigger: ATCCTGGTGGCAGTGGGCCAAGACTGCTACACACGG...TATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS CCA 90 bp | ATTGGAAACAGAAGGGAGCTCCCACCTGCCCTCCTCCTGACTGTCTaGACAAGACGAGCTGTAGGCGAAACAGTACAGGTCCTGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: IGNRRELPPALLLTV*TRRAVGETVQVLLD Trigger: GTCCAGCAGGACCTGTACTGTTTCGCCTACAGCTCGTCTTGTCCAGACAGTCAGGAGGAGGGCAGGTGGGAGCTCCCTTCTGTTTCCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCGCTCTCCATCTCCTTTaGCTGGATGCCCTCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: SQCLTTEPSLQAPGQSLCALHLL*LDALLC Trigger: ACAAAGGAGGGCATCCAGCAAAAGGAGATGGAGAGC...GCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | GAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTTTGGAGCCTCCGATTTaGACGTCATTCACTGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: EPSLQAPGQSLCILPSEALEPPI*TSFTVK Trigger: CTTCACAGTGAATGACGTCAAAATCGGAGGCTCCAA...AGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CTCTGGAAGAGCAGCCAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTTTGATGATGCCGTACTaGGAGCCTCCGATTTTGACG | + |
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Preference number: 5 (lower is better) Translates to: LWKSSQCLTTEPSLQAPGLMMPY*EPPILT Trigger: CGTCAAAATCGGAGGCTCCAAGTACGGCATCATCAA...ACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTGGCTGCTCTTCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | GGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTGAGATGGTTGTGAGGTTGAGACCCTGCAGGTaGATGATGCCGTACTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GQKRGLDSLELESEMVVRLRPCR*MMPYLE Trigger: CTCCAAGTACGGCATCATCAACCTGCAGGGTCTCAA...CCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATTTGAGACCCTGCAGGTaGATGATGCCGTACTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PGQSLCILPSEAEGLHLHLRPCR*MMPYLE Trigger: CTCCAAGTACGGCATCATCAACCTGCAGGGTCTCAA...ATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTGACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGGAGTTCACCTTCCTGTaGGTAAAGTACAGGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: LSHLSRPQVSRFAFCPPREFTFL*VKYRFS Trigger: TGAAAACCTGTACTTTACCAACAGGAAGGTGAACTC...CCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | GGCCAGAAGAGGGGGCTGGATTCTCTGGAACTGGAGTCTGAGATGGTTGTGAGGCTGGTCTGTACCTGCTaGGTGGTTACTGACAAACAG | + |
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Preference number: 5 (lower is better) Translates to: GQKRGLDSLELESEMVVRLVCTC*VVTDKQ Trigger: CTGTTTGTCAGTAACCACCAAGCAGGTACAGACCAG...CCTCACAACCATCTCAGACTCCAGTTCCAGAGAATCCAGCCCCCTCTTCTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTGCCAAGACATCACTGTaGATCCTGTATGACTGCCGG | + |
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Preference number: 5 (lower is better) Translates to: QCLTTEPSLQAPGQSLCIAKTSL*ILYDCR Trigger: CCGGCAGTCATACAGGATCAACAGTGATGTCTTGGC...AATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTCTGCCCTCCGAGGTATAAAATGTCCTCATaGGAAACAGAAGGGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LSHLSRPQVSRFAFCPPRYKMSS*ETEGSS Trigger: GGAGCTCCCTTCTGTTTCCAATGAGGACATTTTATA...CCTCGGAGGGCAGAATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS TCA 90 bp | CTGTCACCACATTGGTCAAGAGGACCCTCCGAGACAAACCTGTACTaGAGCAGTTATTTGCCTGGACGTTCAAGGACCAGGCACAGGACC | + |
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Preference number: 5 (lower is better) Translates to: LSPHWSRGPSETNLY*SSYLPGRSRTRHRT Trigger: GGTCCTGTGCCTGGTCCTTGAACGTCCAGGCAAATAACTGCTTCAGTACAGGTTTGTCTCGGAGGGTCCTCTTGACCAATGTGGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS GCA 90 bp | CAGCACACAGAGTTCACCTTCCTGTTGGTAAAGTACAGGTTTTCATaGATCTGCACCTCGAACGTGGGGGCCTTGAGACCCTGCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: QHTEFTFLLVKYRFS*ICTSNVGALRPCRL Trigger: CAACCTGCAGGGTCTCAAGGCCCCCACGTTCGAGGTGCAGATGCATGAAAACCTGTACTTTACCAACAGGAAGGTGAACTCTGTGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CAGTCGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCATTGATGATGCCGTACTaGGAGCCTCCGATTTTGACG | + |
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Preference number: 5 (lower is better) Translates to: QSLCILPSEAEGLHLHTALMMPY*EPPILT Trigger: CGTCAAAATCGGAGGCTCCAAGTACGGCATCATCAA...TGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCACTGGTCTGTACCTGCTaGGTGGTTACTGACAAACAG | + |
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Preference number: 5 (lower is better) Translates to: RFAFCPPRLKDSTCIQQALVCTC*VVTDKQ Trigger: CTGTTTGTCAGTAACCACCAAGCAGGTACAGACCAG...TGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS GCA 90 bp | ACAGAGTTCACCTTCCTGTTGGTAAAGTACAGGTTTTCATGCATCTaGACCTCGAACGTGGGGGCCTTGAGACCCTGCAGGTTGATGATG | + |
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Preference number: 5 (lower is better) Translates to: TEFTFLLVKYRFSCI*TSNVGALRPCRLMM Trigger: CATCATCAACCTGCAGGGTCTCAAGGCCCCCACGTTCGAGGTGCAGATGCATGAAAACCTGTACTTTACCAACAGGAAGGTGAACTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CGCTTTGCATTCTGCCCTCCGAGGCTGAAGGACTCCACTTGCATACAGCAAGCAGAGTTCACCTTCCTGTaGGTAAAGTACAGGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: RFAFCPPRLKDSTCIQQAEFTFL*VKYRFS Trigger: TGAAAACCTGTACTTTACCAACAGGAAGGTGAACTC...TGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGAATGCAAAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS-3UTR CAA 90 bp | CAGTGCTTAACCACTGAGCCATCTCTCCAGGCCCCAGGTCAGTCGCTTTGCATTTATAAAATGTCCTCATaGGAAACAGAAGGGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: QCLTTEPSLQAPGQSLCIYKMSS*ETEGSS Trigger: GGAGCTCCCTTCTGTTTCCAATGAGGACATTTTATA...AATGCAAAGCGACTGACCTGGGGCCTGGAGAGATGGCTCAGTGGTTAAGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS GCA 72 bp | GATGCCCCTGTGGCGTACCTCTCACTGGAATCACACTaGCCCAGGGCAGGGCTCTGGTGTCGGCTTCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: DAPVAYLSLESH*PRAGLWCRLRP Trigger: CGGGCGAAGCCGACACCAGAGCCCTGCCCTGGGGCAGTGTGATTCCAGTGAGAGGTACGCCACAGGGGCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021645.9 ENSMUST00000222502.2 ENSMUST00000223291.2 |
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| CDS CCA 72 bp | GTGAGCTCTGAGATGCCCCTGTGGCGTACCTCTCACTaGAATCACACTGCCCCAGGGCAGGGCTCTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: VSSEMPLWRTSH*NHTAPGQGSGV Trigger: GACACCAGAGCCCTGCCCTGGGGCAGTGTGATTCCAGTGAGAGGTACGCCACAGGGGCATCTCAGAGCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021645.9 ENSMUST00000222502.2 ENSMUST00000223291.2 |
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| CDS TCA 72 bp | CTGGTCTGTACCTGCTTGGTGGTTACTGACAAACAGTaGAGCGGGGAGCAAGGTGGCACAGCCTGGCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LVCTCLVVTDKQ*SGEQGGTAWRL Trigger: GAGACGCCAGGCTGTGCCACCTTGCTCCCCGCTTCACTGTTTGTCAGTAACCACCAAGCAGGTACAGACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS CCA 72 bp | AGAAGGGAGCTCCCACCTGCCCTCCTCCTGACTGTCTaGACAAGACGAGCTGTAGGCGAAACAGTACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RRELPPALLLTV*TRRAVGETVQV Trigger: GACCTGTACTGTTTCGCCTACAGCTCGTCTTGTCCAGACAGTCAGGAGGAGGGCAGGTGGGAGCTCCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS CAA 90 bp | CTGGAAGTTCTGGCACTGAAGACTCTCCAGTTCTGCTGGACGAGGTaGACGGGGACTCAGCATCATGGTGGCCAGAATCTTGTGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LEVLALKTLQFCWTR*TGTQHHGGQNLVSS Trigger: AGAGCTCACAAGATTCTGGCCACCATGATGCTGAGTCCCCGTCAACCTCGTCCAGCAGAACTGGAGAGTCTTCAGTGCCAGAACTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021645.9 ENSMUST00000222502.2 ENSMUST00000223291.2 |
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| CDS GCA 72 bp | AACCTGGAAGTTCTGGCACTGAAGACTCTCCAGTTCTaGTGGACGAGGTTGACGGGGACTCAGCATCATGGT | + |
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Preference number: 6 (lower is better) Translates to: NLEVLALKTLQF*WTRLTGTQHHG Trigger: ACCATGATGCTGAGTCCCCGTCAACCTCGTCCAGCAGAACTGGAGAGTCTTCAGTGCCAGAACTTCCAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021645.9 ENSMUST00000222502.2 ENSMUST00000223291.2 |
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| CDS GCA 72 bp | AAATGTCCTCATTGGAAACAGAAGGGAGCTCCCACCTaGCCTCCTCCTGACTGTCTGGACAAGACGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KCPHWKQKGAPT*PPPDCLDKTSC Trigger: ACAGCTCGTCTTGTCCAGACAGTCAGGAGGAGGGCAGGTGGGAGCTCCCTTCTGTTTCCAATGAGGACATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS TCA 72 bp | TGGATGCCCTCCTTTGTGAGGGGGTTGCAGTTGTTGTaGCCCGGGAGCAAACGGAAGTATCGGTTCTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: WMPSFVRGLQLL*PGSKRKYRFFS Trigger: TGAAAAGAACCGATACTTCCGTTTGCTCCCGGGTCACAACAACTGCAACCCCCTCACAAAGGAGGGCATCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS GCA 72 bp | GAGTTCACCTTCCTGTTGGTAAAGTACAGGTTTTCATaGATCTGCACCTCGAACGTGGGGGCCTTGAGACCC | + |
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Preference number: 6 (lower is better) Translates to: EFTFLLVKYRFS*ICTSNVGALRP Trigger: GGGTCTCAAGGCCCCCACGTTCGAGGTGCAGATGCATGAAAACCTGTACTTTACCAACAGGAAGGTGAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS CAA 72 bp | TTGATCCTGTATGACTGCCGGTGTCCTGTCACCACATaGGTCAAGAGGACCCTCCGAGACAAACCTGTACTG | + |
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Preference number: 6 (lower is better) Translates to: LILYDCRCPVTT*VKRTLRDKPVL Trigger: CAGTACAGGTTTGTCTCGGAGGGTCCTCTTGACCAATGTGGTGACAGGACACCGGCAGTCATACAGGATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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| CDS TCA 72 bp | CATTGGTCAAGAGGACCCTCCGAGACAAACCTGTACTaGAGCAGTTATTTGCCTGGACGTTCAAGGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: HWSRGPSETNLY*SSYLPGRSRTR Trigger: CCTGGTCCTTGAACGTCCAGGCAAATAACTGCTTCAGTACAGGTTTGTCTCGGAGGGTCCTCTTGACCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021645.9 ENSMUST00000223291.2 |
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