Pregenerated sensors for DCAF17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041966Ensembl transcript IDs: ENSMUST00000064141.12, ENSMUST00000102701.5, ENSMUST00000112159.9, ENSMUST00000112167.9, ENSMUST00000130292.8, ENSMUST00000135357.8, ENSMUST00000136299.2, ENSMUST00000154704.8
Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGAACCCGGAACACTGCGAGGTACAACAAAACGGGTGGTGAAGTaGCTGCCTGGCGAGCCGCTGCGGAGCCTTTGTTCTGAGCCGACT | + |
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Preference number: 1 (lower is better) Translates to: AEPGTLRGTTKRVVK*LPGEPLRSLCSEPT Trigger: AGTCGGCTCAGAACAAAGGCTCCGCAGCGGCTCGCCAGGCAGGCACTTCACCACCCGTTTTGTTGTACCTCGCAGTGTTCCGGGTTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
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| 3UTR TCA 90 bp | AAAGGGCAGAACCCGGAACACTGCGAGGTACAACAAAACGGGTGGTaGAGTGCCTGCCTGGCGAGCCGCTGCGGAGCCTTTGTTCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: KGQNPEHCEVQQNGW*SACLASRCGAFVLS Trigger: GCTCAGAACAAAGGCTCCGCAGCGGCTCGCCAGGCAGGCACTTCACCACCCGTTTTGTTGTACCTCGCAGTGTTCCGGGTTCTGCCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
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| 3UTR TCA 90 bp | AGCATGGTATGGTGGTGTGTGCCTGAAACTCAGTACTTGAGACGCTaGGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAG | + |
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Preference number: 1 (lower is better) Translates to: SMVWWCVPETQYLRR*GRPTLSWRPAWAIE Trigger: CTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAGCGTCTCAAGTACTGAGTTTCAGGCACACACCACCATACCATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
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| 3UTR TCA 90 bp | AGTATGCCTTTAGTCCCAGTGCTGGGAAAGAGACAGCAGCATCCCTaGCCAGCCAACCAGGCTAGCAGTATCAGTAAGCTGCAGGCCCTA | + |
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Preference number: 1 (lower is better) Translates to: SMPLVPVLGKRQQHP*PANQASSISKLQAL Trigger: TAGGGCCTGCAGCTTACTGATACTGCTAGCCTGGTTGGCTGGTCAGGGATGCTGCTGTCTCTTTCCCAGCACTGGGACTAAAGGCATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR CCA 90 bp | AAACCCTTCACCATGTATGTGACACACAGCTATGGTCTCAGCACTTaGGAGGCCAAGAGGGGAGCATCAGGTGTGCAAGGCCAGTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: KPFTMYVTHSYGLST*EAKRGASGVQGQSC Trigger: GCAAGACTGGCCTTGCACACCTGATGCTCCCCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATACATGGTGAAGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR GCA 90 bp | ACTTGGGAGGCCAAGAGGGGAGCATCAGGTGTGCAAGGCCAGTCTTaGCTATGTACTGAGTTTGAAGTGAGCCCGGGTTACATAGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: TWEAKRGASGVQGQS*LCTEFEVSPGYIVV Trigger: AACCACTATGTAACCCGGGCTCACTTCAAACTCAGTACATAGGCAAGACTGGCCTTGCACACCTGATGCTCCCCTCTTGGCCTCCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR TCA 90 bp | GGAATGCCAAAAGGAGCCTCTCCTACAGTCCCAGTAGTCCCGCCCTaGCTGCATGCACACCCTAAGTCAAGTTTCTGTTGCATGAACTGT | + |
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Preference number: 1 (lower is better) Translates to: GMPKGASPTVPVVPP*LHAHPKSSFCCMNC Trigger: ACAGTTCATGCAACAGAAACTTGACTTAGGGTGTGCATGCAGTCAGGGCGGGACTACTGGGACTGTAGGAGAGGCTCCTTTTGGCATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR TCA 90 bp | CCTCCTCTTCTCCAGGGTCACAGACCATCTGGTAAACATAGCAGCTaGAGACCCTGTTGGGCTTCTGTTCGATGTGCAGCACCAAATCTC | + |
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Preference number: 1 (lower is better) Translates to: PPLLQGHRPSGKHSS*RPCWASVRCAAPNL Trigger: GAGATTTGGTGCTGCACATCGAACAGAAGCCCAACAGGGTCTTCAGCTGCTATGTTTACCAGATGGTCTGTGACCCTGGAGAAGAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR TCA 90 bp | ATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTAACTGCT | + |
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Preference number: 1 (lower is better) Translates to: ILLRMVVSHHVVAGI*TPDLRKSSRVLLTA Trigger: AGCAGTTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR CCA 90 bp | AGCAGCTGCAGACAGGAGACAGCCGGACCTTTGGGAAGCACACGTTaGCTTTGTTGTTGCTACTGCTATTATTCCAGCACTGGGAACAGA | + |
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Preference number: 1 (lower is better) Translates to: SSCRQETAGPLGSTR*LCCCYCYYSSTGNR Trigger: TCTGTTCCCAGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTTCCCAAAGGTCCGGCTGTCTCCTGTCTGCAGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR TCA 90 bp | AAAGGGCAGAACCCGGAACACTGCGAGGTACAACAAAACGGGTGGTaGAGTGCCTGCCTACAAGGTAAGAATACATTATGGGCAGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: KGQNPEHCEVQQNGW*SACLQGKNTLWAAL Trigger: GAGAGCTGCCCATAATGTATTCTTACCTTGTAGGCAGGCACTTCACCACCCGTTTTGTTGTACCTCGCAGTGTTCCGGGTTCTGCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR TCA 90 bp | CTGTTTTGCCATGAACCATTTCTTCCTGTGGCGCCAGAAGCAACTTaGGGAACCCTGACAATGAGCCATCTCAGCGCCAACACTGTGAAC | + |
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Preference number: 1 (lower is better) Translates to: LFCHEPFLPVAPEAT*GTLTMSHLSANTVN Trigger: GTTCACAGTGTTGGCGCTGAGATGGCTCATTGTCAGGGTTCCTCAAGTTGCTTCTGGCGCCACAGGAAGAAATGGTTCATGGCAAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR CCA 90 bp | ATGTATCAAGGTCAGCAGCAGACACAAGCCATTCAGACTCACAGCTaGGCATGGAGGCTCATCATAGCCTGGACGGCACAGAAGATTTCA | + |
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Preference number: 1 (lower is better) Translates to: MYQGQQQTQAIQTHS*AWRLIIAWTAQKIS Trigger: TGAAATCTTCTGTGCCGTCCAGGCTATGATGAGCCTCCATGCCCAGCTGTGAGTCTGAATGGCTTGTGTCTGCTGCTGACCTTGATACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR TCA 90 bp | TTGACTGAATGCAAAATTAGGTGGAAGGAGAGAAAGAGGCATTGGTaGCTGCAGAAAGCCCTGGAGGTGAACAGTCAAACCAGGGCCGGA | + |
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Preference number: 1 (lower is better) Translates to: LTECKIRWKERKRHW*LQKALEVNSQTRAG Trigger: TCCGGCCCTGGTTTGACTGTTCACCTCCAGGGCTTTCTGCAGTCACCAATGCCTCTTTCTCTCCTTCCACCTAATTTTGCATTCAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR GCA 90 bp | AAGCAGAGTCTCAATGCAGTCCAGGCTGGCTCTGAACTCATTACATaGCAAGCTGACACGGAATTCTTCATTGTCCTGCCTCTGCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: KQSLNAVQAGSELIT*QADTEFFIVLPLPL Trigger: CAAAGGCAGAGGCAGGACAATGAAGAATTCCGTGTCAGCTTGGCATGTAATGAGTTCAGAGCCAGCCTGGACTGCATTGAGACTCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR GCA 90 bp | ACAGTTCCCACGGTGGCATCTGAGAGACGTTTTCCATGGGAATCCTaGAACAAAACCGTTAGCAACGAAACCCTTCACCATGTATGTGAC | + |
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Preference number: 1 (lower is better) Translates to: TVPTVASERRFPWES*NKTVSNETLHHVCD Trigger: GTCACATACATGGTGAAGGGTTTCGTTGCTAACGGTTTTGTTGCAGGATTCCCATGGAAAACGTCTCTCAGATGCCACCGTGGGAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR CCA 90 bp | AGGACGACTTGGAAGAATGAGATGACCGGGGAGATTCTGAGCAGCTaGGTTTCTCAGAAAGGGACTGTAAGAAACAGTTTCTCCCTACAC | + |
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Preference number: 1 (lower is better) Translates to: RTTWKNEMTGEILSS*VSQKGTVRNSFSLH Trigger: GTGTAGGGAGAAACTGTTTCTTACAGTCCCTTTCTGAGAAACCCAGCTGCTCAGAATCTCCCCGGTCATCTCATTCTTCCAAGTCGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR CCA 90 bp | AAGCACACGTTGGCTTTGTTGTTGCTACTGCTATTATTCCAGCACTaGGAACAGAACCTAGGGCCTCATGCACAACAGCCAAGTGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: KHTLALLLLLLLFQH*EQNLGPHAQQPSAL Trigger: TAGAGCACTTGGCTGTTGTGCATGAGGCCCTAGGTTCTGTTCCCAGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR TCA 90 bp | CACTGGCTTGGAACTCCTGATCTTTCTGCTCTACCCGCCATGCACTaGTATTACAAGTGTGTTCCACCATACCTGGCTCCTATATTTAGT | + |
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Preference number: 1 (lower is better) Translates to: HWLGTPDLSALPAMH*YYKCVPPYLAPIFS Trigger: ACTAAATATAGGAGCCAGGTATGGTGGAACACACTTGTAATATCAGTGCATGGCGGGTAGAGCAGAAAGATCAGGAGTTCCAAGCCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR GCA 90 bp | TATAGCACTGGCTTGGAACTCCTGATCTTTCTGCTCTACCCGCCATaGACTGATATTACAAGTGTGTTCCACCATACCTGGCTCCTATAT | + |
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Preference number: 1 (lower is better) Translates to: YSTGLELLIFLLYPP*TDITSVFHHTWLLY Trigger: ATATAGGAGCCAGGTATGGTGGAACACACTTGTAATATCAGTGCATGGCGGGTAGAGCAGAAAGATCAGGAGTTCCAAGCCAGTGCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR TCA 90 bp | ACCAAGTCTCAAGTTACAATGACTCACTGTCTTAACCACTTCTGTTaGCAGCTTCCTCCTCTTCTCCAGGGTCACAGACCATCTGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: TKSQVTMTHCLNHFC*QLPPLLQGHRPSGK Trigger: TTTACCAGATGGTCTGTGACCCTGGAGAAGAGGAGGAAGCTGTCAACAGAAGTGGTTAAGACAGTGAGTCATTGTAACTTGAGACTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR GCA 90 bp | CAAATGAACTTCCAAGCTAAACAGCATCACCCTTCTTCTCTCTGCTaGTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: QMNFQAKQHHPSSLC*CSWICFSLMLCKPV Trigger: AACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAGAGAAGAAGGGTGATGCTGTTTAGCTTGGAAGTTCATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR CCA 90 bp | ACCCTGACAATGAGCCATCTCAGCGCCAACACTGTGAACTCCATCTaGTTCTGTTCTCTTCAAAATCAACAACACATTCCACAGCAATTT | + |
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Preference number: 1 (lower is better) Translates to: TLTMSHLSANTVNSI*FCSLQNQQHIPQQF Trigger: AAATTGCTGTGGAATGTGTTGTTGATTTTGAAGAGAACAGAACCAGATGGAGTTCACAGTGTTGGCGCTGAGATGGCTCATTGTCAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR TCA 90 bp | CATGGCTATATGTCACATCCCATGACTCCACTAGTGGGATGCTTTTaGGTAAGGTTCCATATTCATTACAGTGGAAATCCAGGTGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: HGYMSHPMTPLVGCF*VRFHIHYSGNPGEL Trigger: AAGCTCACCTGGATTTCCACTGTAATGAATATGGAACCTTACTCAAAAGCATCCCACTAGTGGAGTCATGGGATGTGACATATAGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR TCA 90 bp | TACAGTGGAAATCCAGGTGAGCTTTTCCTTCAGCATCTATTTGAGTaGCAGCTACTACGGAAAGTAAGTCCAACTCATCTTCATAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: YSGNPGELFLQHLFE*QLLRKVSPTHLHSP Trigger: TGGACTATGAAGATGAGTTGGACTTACTTTCCGTAGTAGCTGTCACTCAAATAGATGCTGAAGGAAAAGCTCACCTGGATTTCCACTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR TCA 90 bp | AAAATGAAGATGAATTTAATGGATAGAACGTTTGCTGTTTTGCCATaGACCATTTCTTCCTGTGGCGCCAGAAGCAACTTGAGGAACCCT | + |
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Preference number: 1 (lower is better) Translates to: KMKMNLMDRTFAVLP*TISSCGARSNLRNP Trigger: AGGGTTCCTCAAGTTGCTTCTGGCGCCACAGGAAGAAATGGTTCATGGCAAAACAGCAAACGTTCTATCCATTAAATTCATCTTCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR CCA 90 bp | CACATAAACATGCAAATATGTCCTCAGAAACAAAGTCAAGTGCACTaGTATTTATACACACACAAACGGACTACAGTCAATAAGACCGCA | + |
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Preference number: 1 (lower is better) Translates to: HINMQICPQKQSQVH*YLYTHKRTTVNKTA Trigger: TGCGGTCTTATTGACTGTAGTCCGTTTGTGTGTGTATAAATACCAGTGCACTTGACTTTGTTTCTGAGGACATATTTGCATGTTTATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR GCA 90 bp | AAAAATCTTCACTATCATCATTGTTATCTTTTGTTGATAGACTCTTaGTTTATAGTCCTTACTGGTCTGGGTGATACTAAGCTGCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: KNLHYHHCYLLLIDS*FIVLTGLGDTKLPR Trigger: CCTGGGCAGCTTAGTATCACCCAGACCAGTAAGGACTATAAAGCAAGAGTCTATCAACAAAAGATAACAATGATGATAGTGAAGATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR TCA 90 bp | ATAGAATCATTTCTTAGATACATAGGATATACAGTGTGCAAGGTTTaGCTGAATGCAAAATTAGGTGGAAGGAGAGAAAGAGGCATTGGT | + |
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Preference number: 1 (lower is better) Translates to: IESFLRYIGYTVCKV*LNAKLGGRRERGIG Trigger: ACCAATGCCTCTTTCTCTCCTTCCACCTAATTTTGCATTCAGTCAAACCTTGCACACTGTATATCCTATGTATCTAAGAAATGATTCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR-3UTR TCA 90 bp | TATCAAGGTCAGCAGCAGACACAAGCCATTCAGACTCACAGCTGGGCATGGAGGAGACAGCAGCATCCCTaGCCAGCCAACCAGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: YQGQQQTQAIQTHSWAWRRQQHP*PANQAS Trigger: GCTAGCCTGGTTGGCTGGTCAGGGATGCTGCTGTCT...CCTCCATGCCCAGCTGTGAGTCTGAATGGCTTGTGTCTGCTGCTGACCTTGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTTCCGGAGTGAGCAGCTaGAGACAGGAGACAGCCGGA | + |
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Preference number: 2 (lower is better) Translates to: QRSHPQNHREQKLAPGFSSGVSS*RQETAG Trigger: TCCGGCTGTCTCCTGTCTGCAGCTGCTCACTCCGGA...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR CAA 90 bp | GAAACCCTTCACCATGTATGTGACACACAGCTATGGTCTCAGCACTaGGGAGGCCAAGAGGGGAGCATCAGGTGTGCAAGGCCAGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: ETLHHVCDTQLWSQH*GGQEGSIRCARPVL Trigger: CAAGACTGGCCTTGCACACCTGATGCTCCCCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATACATGGTGAAGGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAGAATCCCTACAAGTGAAAAGGGCAGAACCCGGAACACTGCGAGGTACACCGACTTCACTGCGATaGCCTCCTGAGGTGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLESLQVKRAEPGTLRGTPTSLR*PPEVCP Trigger: GGGACACACCTCAGGAGGTCATCGCAGTGAAGTCGG...TGTACCTCGCAGTGTTCCGGGTTCTGCCCTTTTCACTTGTAGGGATTCTAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACTAGTCCCGAGCTGTACATCACAATCAGGATTCCATGTGACAAGGTAGCATGCCTGGCGAGCCGCTaGGGAGCCTTTGTTCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LTSPELYITIRIPCDKVACLASR*GAFVLS Trigger: GCTCAGAACAAAGGCTCCGCAGCGGCTCGCCAGGCA...TGCTACCTTGTCACATGGAATCCTGATTGTGATGTACAGCTCGGGACTAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
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| 3UTR CAA 90 bp | CAACTCTCCGGAGTGAGCAGCTGCAGACAGGAGACAGCCGGACCTTaGGGAAGCACACGTTGGCTTTGTTGTTGCTACTGCTATTATTCC | + |
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Preference number: 2 (lower is better) Translates to: QLSGVSSCRQETAGP*GSTRWLCCCYCYYS Trigger: GGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTTCCCAAAGGTCCGGCTGTCTCCTGTCTGCAGCTGCTCACTCCGGAGAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR CAA 90 bp | GATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTAACTGC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSEEQSGALNC Trigger: GCAGTTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR TCA 90 bp | TATCAAGGTCAGCAGCAGACACAAGCCATTCAGACTCACAGCTGGGCATGGAGGAGTGTCTGTCCTTGCTaGGAAGCAACTCTCCGGAGT | + |
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Preference number: 2 (lower is better) Translates to: YQGQQQTQAIQTHSWAWRSVCPC*EATLRS Trigger: ACTCCGGAGAGTTGCTTCTCAGCAAGGACAGACACT...CCTCCATGCCCAGCTGTGAGTCTGAATGGCTTGTGTCTGCTGCTGACCTTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | AAGACGGGAACAGGACCCCAGAAAATGCTGACCTTAAGCAAGGTGAAGGGTGCTGGGGAGCATCAGGTGTaGAAGGCCAGTCTTGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: KTGTGPQKMLTLSKVKGAGEHQV*KASLAY Trigger: ATAGGCAAGACTGGCCTTGCACACCTGATGCTCCCC...AGCACCCTTCACCTTGCTTAAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR CAA 90 bp | TTCCTCTGGCTAATGAGGTTACTCCCAGGCAGGAAAGAACTCCTCTaGGTTTCAATTGTGCTACAAGGAAGAGGCCACCAGGGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLWLMRLLPGRKELL*VSIVLQGRGHQGPA Trigger: TGCTGGCCCCTGGTGGCCTCTTCCTTGTAGCACAATTGAAACCAAGAGGAGTTCTTTCCTGCCTGGGAGTAACCTCATTAGCCAGAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTTGTCCTGAAACTCACACTGAAGACCAGGCTGGCCTTGAAGTCAGAGATAGTCCAGGCTGGCTCTaGACTCATTACATGCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: PGCPETHTEDQAGLEVRDSPGWL*THYMPS Trigger: GCTTGGCATGTAATGAGTTCAGAGCCAGCCTGGACT...ATCTCTGACTTCAAGGCCAGCCTGGTCTTCAGTGTGAGTTTCAGGACAACCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTCACCGAGGGGAATGGACCGTGGGAACTGTTGGATGTGACCAAAGAGTGAACCATTTCTTCCTGTaGCGCCAGAAGCAACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: GFHRGEWTVGTVGCDQRVNHFFL*RQKQLE Trigger: CTCAAGTTGCTTCTGGCGCCACAGGAAGAAATGGTT...CACTCTTTGGTCACATCCAACAGTTCCCACGGTCCATTCCCCTCGGTGAAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR CAA 90 bp | GTAGCCCTGGTTGTCCTGAAACTCACACTGAAGACCAGGCTGGCCTaGAAGTCAGAGATCCACCTGTCTTTGTCTACTAAATGCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: VALVVLKLTLKTRLA*KSEIHLSLSTKCWD Trigger: GTCCCAGCATTTAGTAGACAAAGACAGGTGGATCTCTGACTTCAAGGCCAGCCTGGTCTTCAGTGTGAGTTTCAGGACAACCAGGGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTCTCACTGTTCTGCTATaGCAGTGTGCAGAAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: QRSHPQNHREQKLAPGFSLTVLL*QCAEAS Trigger: TGAGGCTTCTGCACACTGCCATAGCAGAACAGTGAG...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTACATCACAATCAGGATTCCATGTGACAAGGTAGCATCTGTGACATTCTCAACTGCGATGACCTCCTaGGGTGTGTCCCAGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LYITIRIPCDKVASVTFSTAMTS*GVSQLR Trigger: CCTGAGCTGGGACACACCTCAGGAGGTCATCGCAGT...TGAGAATGTCACAGATGCTACCTTGTCACATGGAATCCTGATTGTGATGTACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTACATGCAGGCACATCTaGAAATATGTGCACACCCAC | + |
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Preference number: 2 (lower is better) Translates to: QRSHPQNHREQKLAPGFSTCRHI*KYVHTH Trigger: GTGGGTGTGCACATATTTGCAGATGTGCCTGCATGT...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTTGTGCCACCACTTACTaGCCTGGAATTCACACCATT | + |
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Preference number: 2 (lower is better) Translates to: QRSHPQNHREQKLAPGFSCATTY*PGIHTI Trigger: AATGGTGTGAATTCCAGGCCAGTAAGTGGTGGCACA...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 90 bp | CCTTCTTCTCTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTaGTGCAAGCCTGTTGGTCAATGGGTCAGGTATGGTAGACATCCC | + |
|
Preference number: 2 (lower is better) Translates to: PSSLCCCSWICFSLM*CKPVGQWVRYGRHP Trigger: GGGATGTCTACCATACCTGACCCATTGACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAGAGAAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTCTGACATCAGTAGAAGACGGGAACAGGACCCCAGAAAATGCTGACCTTTTTGCTGTTTTGCCATaGACCATTTCTTCCTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: WPLTSVEDGNRTPENADLFAVLP*TISSCG Trigger: GCCACAGGAAGAAATGGTTCATGGCAAAACAGCAAA...AAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTTCTACTGATGTCAGAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR-3UTR TCA 90 bp | AAGACGGGAACAGGACCCCAGAAAATGCTGACCTTAAGCAAGGTGAAGGGTGCTGGAATAGAGGCAACCTaGAGGAAGAAAATGTATGCC | + |
|
Preference number: 2 (lower is better) Translates to: KTGTGPQKMLTLSKVKGAGIEAT*RKKMYA Trigger: GGCATACATTTTCTTCCTTCAGGTTGCCTCTATTCC...AGCACCCTTCACCTTGCTTAAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTCAATGGGTCAGGTATGGTACTGGCTTGGAACTCCTaGTCTTTCTGCTCTACCCGC | + |
|
Preference number: 2 (lower is better) Translates to: FVSHSCCASLLVNGSGMVLAWNS*SFCSTR Trigger: GCGGGTAGAGCAGAAAGATCAGGAGTTCCAAGCCAG...TACCATACCTGACCCATTGACCAACAGGCTTGCACAACATGAGTGAGAAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTTCTTGGTTTCAATTGTaGTACAAGGAAGAGGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: QRSHPQNHREQKLAPGFSSWFQL*YKEEAT Trigger: GGTGGCCTCTTCCTTGTAGCACAATTGAAACCAAGA...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTTCTTCTCTCTGCTGCTaGTCTTGGATTTGTTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QRSHPQNHREQKLAPGFSSSLCC*SWICFS Trigger: TGAGAAACAAATCCAAGAGCAGCAGCAGAGAGAAGA...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | ATCAACCATGTGGTTCACATTCCCATAAACTGCCACAACTGGCCAAAACTAAACTTGTGGCAACCCTCCTaGTTCAGCCTCCCAGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: INHVVHIPINCHNWPKLNLWQPS*FSLPVA Trigger: AGCAACTGGGAGGCTGAAGCAGGAGGGTTGCCACAA...GTTTAGTTTTGGCCAGTTGTGGCAGTTTATGGGAATGTGAACCACATGGTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTGAAACTCACACTGAAGACCAGGCTGGCCTTGAAGTCAGAGATCCACCTATGTTTCAAAATGCTTaGTCTCTTGGGACAGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: CPETHTEDQAGLEVRDPPMFQNA*SLGTAS Trigger: GGATGCTGTCCCAAGAGACCAAGCATTTTGAAACAT...AGGTGGATCTCTGACTTCAAGGCCAGCCTGGTCTTCAGTGTGAGTTTCAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCCTGAAACTCACACTGAAGACCAGGCTGGCCTTGAAGTCAGAGATCCACCTTCAATGATGTCTCTTTaGCTCCTAGATAACTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CPETHTEDQAGLEVRDPPSMMSL*LLDNCP Trigger: AGGACAGTTATCTAGGAGTCAAAGAGACATCATTGA...AGGTGGATCTCTGACTTCAAGGCCAGCCTGGTCTTCAGTGTGAGTTTCAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCATCTCAGCGCCAACACTGTGAACTCCATCTGGTTCTGTTCTCTTCAAAATGCCAGAAGAAGGATCTaGGTTTCATTCCTGGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: SHLSANTVNSIWFCSLQNARRRI*VSFLDL Trigger: TAGGTCCAGGAATGAAACTCAGATCCTTCTTCTGGC...ATTTTGAAGAGAACAGAACCAGATGGAGTTCACAGTGTTGGCGCTGAGATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR-3UTR TCA 90 bp | GCATCTGTGACATTCTCAAAAACCTTTTTGTTGATCTCTAGAATCCCTACAAGTCAACAAAACGGGTGGTaGAGTGCCTGCCTGGCGAGC | + |
|
Preference number: 2 (lower is better) Translates to: ASVTFSKTFLLISRIPTSQQNGW*SACLAS Trigger: GCTCGCCAGGCAGGCACTTCACCACCCGTTTTGTTG...ACTTGTAGGGATTCTAGAGATCAACAAAAAGGTTTTTGAGAATGTCACAGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTCTGACATCAGTAGAAGACGGGAACAGGACCCCAGAAAATGCTGACCTTGAACGTTTGCTGTTTTaGCATGAACCATTTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WPLTSVEDGNRTPENADLERLLF*HEPFLP Trigger: AGGAAGAAATGGTTCATGGCAAAACAGCAAACGTTC...AAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTTCTACTGATGTCAGAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR-3UTR GCA 90 bp | TATCAAGGTCAGCAGCAGACACAAGCCATTCAGACTCACAGCTGGGCATGGAGGGCCCCTTTATGTTCTTaGTTACATATGAAAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YQGQQQTQAIQTHSWAWRAPLCS*LHMKTA Trigger: TGCTGTTTTCATATGTAAGCAAGAACATAAAGGGGC...CCTCCATGCCCAGCTGTGAGTCTGAATGGCTTGTGTCTGCTGCTGACCTTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTGGAAAGAACTCCTCTTaGTTTCAATTGTGCTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: QRSHPQNHREQKLAPGFSGKNSS*FQLCYK Trigger: CTTGTAGCACAATTGAAACCAAGAGGAGTTCTTTCC...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACTAGGCGGAATACAGACCATGCAAAACAAACAAAGACCACCTCACACTCAGAGATTCTGAGCAGCTaGGTTTCTCAGAAAGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: STRRNTDHAKQTKTTSHSEILSS*VSQKGT Trigger: AGTCCCTTTCTGAGAAACCCAGCTGCTCAGAATCTC...TGAGTGTGAGGTGGTCTTTGTTTGTTTTGCATGGTCTGTATTCCGCCTAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTTTTAAAGCAAGGCTTTaGTACATAGTACAAGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QRSHPQNHREQKLAPGFSFKARL*YIVQVG Trigger: GCCAACTTGTACTATGTAGCAAAGCCTTGCTTTAAA...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTCCTGATCTAATGTGCTaGGACACAGTTAAAACATGG | + |
|
Preference number: 2 (lower is better) Translates to: LCCCSWICFSLMLCKPVGPDLMC*DTVKTW Trigger: CCATGTTTTAACTGTGTCCCAGCACATTAGATCAGG...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR CAA 90 bp | CAGCTGTATCTCATCCTGTTAGCTGGGCACAGCTGGCTCTCTCTTTaGCTCTGTGTGTGTGTTGTGTATATTTGTATGTATGTGTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: QLYLILLAGHSWLSL*LCVCVVYICMYVCE Trigger: TTCACACACATACATACAAATATACACAACACACACACAGAGCAAAAGAGAGAGCCAGCTGTGCCCAGCTAACAGGATGAGATACAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTTTGGGCCAACATGTATTATTCTTCCAGAAGCATCAGGGTGGAAATAGATGCGTTCTCCAGAGATaGAACTTCAAAGAGTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LGLGQHVLFFQKHQGGNRCVLQR*NFKEWR Trigger: CCTCCACTCTTTGAAGTTTCATCTCTGGAGAACGCA...TCTATTTCCACCCTGATGCTTCTGGAAGAATAATACATGTTGGCCCAAACCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTGAAACTCACACTGAAGACCAGGCTGGCCTTGAAGTCAGAGATCCACCTAGAATTAGTTATCCCTaGATCAATGATGTCTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: CPETHTEDQAGLEVRDPPRISYP*INDVSL Trigger: CAAAGAGACATCATTGATGCAGGGATAACTAATTCT...AGGTGGATCTCTGACTTCAAGGCCAGCCTGGTCTTCAGTGTGAGTTTCAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGTAAGTATGCCTTTAGTCCCAGTGCTGGGAAAGAGACAGCAGCATCCCTGAGAAACAAAGTCAAGTaGACTGGTATTTATACACAC | + |
|
Preference number: 2 (lower is better) Translates to: DGKYAFSPSAGKETAASLRNKVK*TGIYTH Trigger: GTGTGTATAAATACCAGTGCACTTGACTTTGTTTCT...CAGGGATGCTGCTGTCTCTTTCCCAGCACTGGGACTAAAGGCATACTTACCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTCCATATTCATTACAGTGGAAATCCAGGTGAGCTTTTCCTTCAGCATCTAGGATGGCCTCCAATCTaGAATGCGTTCTCCAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RFHIHYSGNPGELFLQHLGWPPI*NAFSRD Trigger: ATCTCTGGAGAACGCATTCCAGATTGGAGGCCATCC...TAGATGCTGAAGGAAAAGCTCACCTGGATTTCCACTGTAATGAATATGGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTAACTTGAATCAAGTATaGCCTGTTGCTCTTCTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LCCCSWICFSLMLCKPVGNLNQV*PVALLL Trigger: TAGGAGAAGAGCAACAGGCCATACTTGATTCAAGTT...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTGTTTTCAAGTCTGACTaGAGAATTCATGGCATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LCCCSWICFSLMLCKPVGVFKSD*RIHGIL Trigger: GAGAATGCCATGAATTCTCCAGTCAGACTTGAAAAC...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGTCCACGATTTTGAAAGTCTCTTGTTCTGGGTCATCATCCAGAAGGCTGACTCTCCAAAGCACTTCTaGAAACACTACCTTCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: IVHDFESLLFWVIIQKADSPKHF*KHYLHE Trigger: CTCATGAAGGTAGTGTTTTCAGAAGTGCTTTGGAGA...GTCAGCCTTCTGGATGATGACCCAGAACAAGAGACTTTCAAAATCGTGGACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR-3UTR GCA 90 bp | CCTAATGGAAATGTTTCAAAATGCTTGGTCTCTTGGGACAGCATCCTAGGGAGCTGTTCTGGAAAATGCTaGAGAATGTTCCATGCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PNGNVSKCLVSWDSILGSCSGKC*RMFHAD Trigger: ATCTGCATGGAACATTCTGCAGCATTTTCCAGAACA...GCTCCCTAGGATGCTGTCCCAAGAGACCAAGCATTTTGAAACATTTCCATTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112167.9 ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | CCTAATGGAAATGTTTCAAAATGCTTGGTCTCTTGGGACAGCATCCTAGGGAGCACTTGTTCTGGAAAATaGTGCAGAATGTTCCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: PNGNVSKCLVSWDSILGSTCSGK*CRMFHA Trigger: TGCATGGAACATTCTGCAGCATTTTCCAGAACAAGT...GCTCCCTAGGATGCTGTCCCAAGAGACCAAGCATTTTGAAACATTTCCATTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112167.9 ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTCAGCGCCAACACTGTGAACTCCATCTGGTTCTGTTCTCTTCAAAATCAATTTCCATGGGAATCCTaGAACAAAACCGTTAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: HLSANTVNSIWFCSLQNQFPWES*NKTVSN Trigger: GTTGCTAACGGTTTTGTTGCAGGATTCCCATGGAAA...TTGATTTTGAAGAGAACAGAACCAGATGGAGTTCACAGTGTTGGCGCTGAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTGTACAGTTAAGATACTaGATAAAAGCACCTTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LCCCSWICFSLMLCKPVGVQLRY*IKAPSG Trigger: ACCTGAAGGTGCTTTTATGCAGTATCTTAACTGTAC...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCTCAGAAAGGGACTGTAAGAAACAGTTTCTCCCTACACGCAGGTTGCTTATCAAAATCTTCCTCTaGCTAATGAGGTTACTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GFSERDCKKQFLPTRRLLIKIFL*LMRLLP Trigger: TGGGAGTAACCTCATTAGCCAGAGGAAGATTTTGAT...AAGCAACCTGCGTGTAGGGAGAAACTGTTTCTTACAGTCCCTTTCTGAGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR CAA 90 bp | GTGCTGGATTACAGGTGTGAACTACCTGCTCTGACTGCTCTTTTCTaGTTTTATATTTCTCTTTGGAGGACGACTTGGAAGAATGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: VLDYRCELPALTALF*FYISLWRTTWKNEM Trigger: CATCTCATTCTTCCAAGTCGTCCTCCAAAGAGAAATATAAAACAAGAAAAGAGCAGTCAGAGCAGGTAGTTCACACCTGTAATCCAGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTATTAAGCAGAGTCTCAATGCAGTCCAGGCTGGCTCTGAACTCATTACAGCACAAGACTTGTTCTaGAAAATGCTGCAGAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: CFIKQSLNAVQAGSELITAQDLF*KMLQNV Trigger: AACATTCTGCAGCATTTTCCAGAACAAGTCTTGTGC...TGTAATGAGTTCAGAGCCAGCCTGGACTGCATTGAGACTCTGCTTAATAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACTAGGCGGAATACAGACCATGCAAAACAAACAAAGACCACCTCACACTCAACTACCTGCTCTGACTaGTCTTTTCTTGTTTTATAT | + |
|
Preference number: 2 (lower is better) Translates to: STRRNTDHAKQTKTTSHSTTCSD*SFLVLY Trigger: ATATAAAACAAGAAAAGAGCAGTCAGAGCAGGTAGT...TGAGTGTGAGGTGGTCTTTGTTTGTTTTGCATGGTCTGTATTCCGCCTAGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGTCCACGATTTTGAAAGTCTCTTGTTCTGGGTCATCATCCAGAAGGCTGACGACTTTGACTTGGTTTaGGCCAACATGTATTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: IVHDFESLLFWVIIQKADDFDLV*ANMYYS Trigger: AGAATAATACATGTTGGCCCAAACCAAGTCAAAGTC...GTCAGCCTTCTGGATGATGACCCAGAACAAGAGACTTTCAAAATCGTGGACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGGAAGCACACGTTGGCTTTGTTGTTGCTACTGCTATTATTCCAGCACTCAAAGTCAAGTGCACTaGTATTTATACACACACAAA | + |
|
Preference number: 2 (lower is better) Translates to: PLGSTRWLCCCYCYYSSTQSQVH*YLYTHK Trigger: TTTGTGTGTGTATAAATACCAGTGCACTTGACTTTG...AGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTTCCCAAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | GTATTAGACTTTAACACGTTACTATCTTGTTCACGAGGTAATTACGTCTGTGTTCTTTGGAGGACGACTTaGAAGAATGAGATGACCGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLDFNTLLSCSRGNYVCVLWRTT*KNEMTG Trigger: CCCGGTCATCTCATTCTTCCAAGTCGTCCTCCAAAG...AACACAGACGTAATTACCTCGTGAACAAGATAGTAACGTGTTAAAGTCTAATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGGAAGCACACGTTGGCTTTGTTGTTGCTACTGCTATTATTCCAGCACTGACACAGTTAAAACATaGACAGGTACAGTTAAGATA | + |
|
Preference number: 2 (lower is better) Translates to: PLGSTRWLCCCYCYYSSTDTVKT*TGTVKI Trigger: TATCTTAACTGTACCTGTCCATGTTTTAACTGTGTC...AGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTTCCCAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR TCA 90 bp | GTATTAGACTTTAACACGTTACTATCTTGTTCACGAGGTAATTACGTCTGTGTTCTACCCGCCATGCACTaGTATTACAAGTGTGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VLDFNTLLSCSRGNYVCVLPAMH*YYKCVP Trigger: TGGAACACACTTGTAATATCAGTGCATGGCGGGTAG...AACACAGACGTAATTACCTCGTGAACAAGATAGTAACGTGTTAAAGTCTAATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 90 bp | TTCTCAGAAAGGGACTGTAAGAAACAGTTTCTCCCTACACGCAGGTaGCTTTTAACTAACATTCTGAAAGTGATTACTGGAATTCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: FSERDCKKQFLPTRR*LLTNILKVITGIQV Trigger: CACTTGAATTCCAGTAATCACTTTCAGAATGTTAGTTAAAAGCAACCTGCGTGTAGGGAGAAACTGTTTCTTACAGTCCCTTTCTGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR TCA 90 bp | GTATTAGACTTTAACACGTTACTATCTTGTTCACGAGGTAATTACGTCTGTGTTGCAGGTTTTCAAGTCTaGCTGGAGAATTCATGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VLDFNTLLSCSRGNYVCVAGFQV*LENSWH Trigger: ATGCCATGAATTCTCCAGTCAGACTTGAAAACCTGC...AACACAGACGTAATTACCTCGTGAACAAGATAGTAACGTGTTAAAGTCTAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR GCA 90 bp | GTATTAGACTTTAACACGTTACTATCTTGTTCACGAGGTAATTACGTCTGTGTTGGAAATGTTTCAAAATaGTTGGTCTCTTGGGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: VLDFNTLLSCSRGNYVCVGNVSK*LVSWDS Trigger: GCTGTCCCAAGAGACCAAGCATTTTGAAACATTTCC...AACACAGACGTAATTACCTCGTGAACAAGATAGTAACGTGTTAAAGTCTAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 90 bp | AGATGCCTGCATACGCTGGTAATGCATGACCCAATGCTTTCAATTTaGAGAAGGATTTGGATTACACAATCATTAAAAACTCAGCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RCLHTLVMHDPMLSI*RRIWITQSLKTQQN Trigger: ATTTTGCTGAGTTTTTAATGATTGTGTAATCCAAATCCTTCTCAAAATTGAAAGCATTGGGTCATGCATTACCAGCGTATGCAGGCATCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | TGGTGGTGTGTGCCTGAAACTCAGTACTTGAGACGCTaGGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WWCVPETQYLRR*GRPTLSWRPAW Trigger: CCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAGCGTCTCAAGTACTGAGTTTCAGGCACACACCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| 3UTR GCA 72 bp | AGCCGCTGCGGAGCCTTTGTTCTGAGCCGACTTCACTaGGATGACCTCCTGAGGTGTGTCCCAGCTCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SRCGAFVLSRLH*DDLLRCVPAQV Trigger: TACCTGAGCTGGGACACACCTCAGGAGGTCATCGCAGTGAAGTCGGCTCAGAACAAAGGCTCCGCAGCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
||
| 3UTR TCA 72 bp | CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TPDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CCA 72 bp | CTTATAGGCATGCAACCCAGGCTAGCCTCCAACTTGTaGCAACCCTCCTGCTTCAGCCTCCCAGTTGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LIGMQPRLASNL*QPSCFSLPVAR Trigger: CCTAGCAACTGGGAGGCTGAAGCAGGAGGGTTGCCACAAGTTGGAGGCTAGCCTGGGTTGCATGCCTATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGACGGGAACAGGACCCCAGAAAATGCTGACCTTAAGCAAGGTGAAGGGTGCTCTATGGTCTCAGCACTaGGGAGGCCAAGAGGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KTGTGPQKMLTLSKVKGALWSQH*GGQEGS Trigger: GCTCCCCTCTTGGCCTCCCAAGTGCTGAGACCATAG...AGCACCCTTCACCTTGCTTAAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCTCTGACATCAGTAGAAGACGGGAACAGGACCCCAGAAAATGCTGACCTTGACTGTGCAAGGGCCTaGGAAGGCATGGGTGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WPLTSVEDGNRTPENADLDCARA*EGMGEG Trigger: TCCCTCACCCATGCCTTCCAAGGCCCTTGCACAGTC...AAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTTCTACTGATGTCAGAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR TCA 72 bp | GAAAGAGGCATTGGTGACTGCAGAAAGCCCTGGAGGTaGACAGTCAAACCAGGGCCGGAGTCAGCTCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ERGIGDCRKPWR*TVKPGPESAPR Trigger: TCTAGGAGCTGACTCCGGCCCTGGTTTGACTGTTCACCTCCAGGGCTTTCTGCAGTCACCAATGCCTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR GCA 72 bp | GCCAAGAGGGGAGCATCAGGTGTGCAAGGCCAGTCTTaGCTATGTACTGAGTTTGAAGTGAGCCCGGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: AKRGASGVQGQS*LCTEFEVSPGY Trigger: GTAACCCGGGCTCACTTCAAACTCAGTACATAGGCAAGACTGGCCTTGCACACCTGATGCTCCCCTCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR CCA 72 bp | ACCATGTATGTGACACACAGCTATGGTCTCAGCACTTaGGAGGCCAAGAGGGGAGCATCAGGTGTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TMYVTHSYGLST*EAKRGASGVQG Trigger: GCCTTGCACACCTGATGCTCCCCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATACATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAGGTCAGCAGCAGACACAAGCCATTCAGACTCACAGCTGGGCATGGAGGCACGGTAGGTGGCTCTaGAGAACACCATTGGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: YQGQQQTQAIQTHSWAWRHGRWL*RTPLAD Trigger: GTCAGCCAATGGTGTTCTCAAGAGCCACCTACCGTG...CCTCCATGCCCAGCTGTGAGTCTGAATGGCTTGTGTCTGCTGCTGACCTTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | AAAGGAGCCTCTCCTACAGTCCCAGTAGTCCCGCCCTaGCTGCATGCACACCCTAAGTCAAGTTTCTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: KGASPTVPVVPP*LHAHPKSSFCC Trigger: GCAACAGAAACTTGACTTAGGGTGTGCATGCAGTCAGGGCGGGACTACTGGGACTGTAGGAGAGGCTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| 3UTR TCA 72 bp | TTAGTCCCAGTGCTGGGAAAGAGACAGCAGCATCCCTaGCCAGCCAACCAGGCTAGCAGTATCAGTAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVPVLGKRQQHP*PANQASSISKL Trigger: CAGCTTACTGATACTGCTAGCCTGGTTGGCTGGTCAGGGATGCTGCTGTCTCTTTCCCAGCACTGGGACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR GCA 72 bp | TCAGCACTTGGGAGGCCAAGAGGGGAGCATCAGGTGTaGAAGGCCAGTCTTGCCTATGTACTGAGTTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SALGRPRGEHQV*KASLAYVLSLK Trigger: CTTCAAACTCAGTACATAGGCAAGACTGGCCTTGCACACCTGATGCTCCCCTCTTGGCCTCCCAAGTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR GCA 72 bp | CAACCCAGGCTAGCCTCCAACTTGTGGCAACCCTCCTaGTTCAGCCTCCCAGTTGCTAGGATTTTAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: QPRLASNLWQPS*FSLPVARILDV Trigger: CACATCTAAAATCCTAGCAACTGGGAGGCTGAAGCAGGAGGGTTGCCACAAGTTGGAGGCTAGCCTGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CCA 72 bp | CTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCGGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCAAGGTCAGCAGCAGACACAAGCCATTCAGACTCACAGCTGGGCATGGAGGCTCTTGAGAACACCATaGGCTGACATCTGGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: YQGQQQTQAIQTHSWAWRLLRTP*ADIWPP Trigger: TGGAGGCCAGATGTCAGCCAATGGTGTTCTCAAGAG...CCTCCATGCCCAGCTGTGAGTCTGAATGGCTTGTGTCTGCTGCTGACCTTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | CTCCAGGGTCACAGACCATCTGGTAAACATAGCAGCTaGAGACCCTGTTGGGCTTCTGTTCGATGTGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LQGHRPSGKHSS*RPCWASVRCAA Trigger: TGCTGCACATCGAACAGAAGCCCAACAGGGTCTTCAGCTGCTATGTTTACCAGATGGTCTGTGACCCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| 3UTR TCA 72 bp | CATGAACCATTTCTTCCTGTGGCGCCAGAAGCAACTTaGGGAACCCTGACAATGAGCCATCTCAGCGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: HEPFLPVAPEAT*GTLTMSHLSAN Trigger: GTTGGCGCTGAGATGGCTCATTGTCAGGGTTCCTCAAGTTGCTTCTGGCGCCACAGGAAGAAATGGTTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR GCA 72 bp | GATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CCA 72 bp | AACGAAACCCTTCACCATGTATGTGACACACAGCTATaGTCTCAGCACTTGGGAGGCCAAGAGGGGAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: NETLHHVCDTQL*SQHLGGQEGSI Trigger: GATGCTCCCCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATACATGGTGAAGGGTTTCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR GCA 72 bp | GCCGGACCTTTGGGAAGCACACGTTGGCTTTGTTGTTaGTACTGCTATTATTCCAGCACTGGGAACAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: AGPLGSTRWLCC*YCYYSSTGNRT Trigger: GGTTCTGTTCCCAGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTTCCCAAAGGTCCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTTGTCCTGAAACTCACACTGAAGACCAGGCTGGCCTTGAAGTCAGAGATTCCTCTTGGTTTCAATaGTGCTACAAGGAAGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PGCPETHTEDQAGLEVRDSSWFQ*CYKEEA Trigger: GGCCTCTTCCTTGTAGCACAATTGAAACCAAGAGGA...ATCTCTGACTTCAAGGCCAGCCTGGTCTTCAGTGTGAGTTTCAGGACAACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | CGTTTATTAAGTAAGCATGGTATGGTGGTGTGTGCCTaGAACTCAGTACTTGAGACGCTGAGGCAGGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RLLSKHGMVVCA*NSVLETLRQAH Trigger: GTGGGCCTGCCTCAGCGTCTCAAGTACTGAGTTTCAGGCACACACCACCATACCATGCTTACTTAATAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| 3UTR TCA 72 bp | AGAAGCAACTCCATTCAGTTTAGTGTCTGTCCTTGCTaGGAAGCAACTCTCCGGAGTGAGCAGCTGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RSNSIQFSVCPC*EATLRSEQLQT Trigger: TGTCTGCAGCTGCTCACTCCGGAGAGTTGCTTCTCAGCAAGGACAGACACTAAACTGAATGGAGTTGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR GCA 72 bp | CTCAATGCAGTCCAGGCTGGCTCTGAACTCATTACATaGCAAGCTGACACGGAATTCTTCATTGTCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LNAVQAGSELIT*QADTEFFIVLP Trigger: AGGCAGGACAATGAAGAATTCCGTGTCAGCTTGGCATGTAATGAGTTCAGAGCCAGCCTGGACTGCATTGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CCA 72 bp | TCCTTACTGGTCTGGGTGATACTAAGCTGCCCAGGCTaGCCTTTACTTGTGGCAATAATCTGCCAACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLLVWVILSCPG*PLLVAIICQHS Trigger: TGAGTGTTGGCAGATTATTGCCACAAGTAAAGGCCAGCCTGGGCAGCTTAGTATCACCCAGACCAGTAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | AACCCGGAACACTGCGAGGTACAACAAAACGGGTGGTaGAGTGCCTGCCTACAAGGTAAGAATACATTATGG | + |
|
Preference number: 3 (lower is better) Translates to: NPEHCEVQQNGW*SACLQGKNTLW Trigger: CCATAATGTATTCTTACCTTGTAGGCAGGCACTTCACCACCCGTTTTGTTGTACCTCGCAGTGTTCCGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| 3UTR GCA 72 bp | ACGGTGGCATCTGAGAGACGTTTTCCATGGGAATCCTaGAACAAAACCGTTAGCAACGAAACCCTTCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: TVASERRFPWES*NKTVSNETLHH Trigger: ATGGTGAAGGGTTTCGTTGCTAACGGTTTTGTTGCAGGATTCCCATGGAAAACGTCTCTCAGATGCCACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR GCA 72 bp | ATTATTCCAGCACTGGGAACAGAACCTAGGGCCTCATaGACAACAGCCAAGTGCTCTACCACTAAGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: IIPALGTEPRAS*TTAKCSTTKLH Trigger: ATGTAGCTTAGTGGTAGAGCACTTGGCTGTTGTGCATGAGGCCCTAGGTTCTGTTCCCAGTGCTGGAATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CCA 72 bp | CCACAGTGGCTGACTGTGCAAGGGCCTTGGAAGGCATaGGTGAGGGATAAACTAAATCTACTTCATACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PQWLTVQGPWKA*VRDKLNLLHTK Trigger: CTTTGTATGAAGTAGATTTAGTTTATCCCTCACCCATGCCTTCCAAGGCCCTTGCACAGTCAGCCACTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR CCA 72 bp | TTGGCTTTGTTGTTGCTACTGCTATTATTCCAGCACTaGGAACAGAACCTAGGGCCTCATGCACAACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LALLLLLLLFQH*EQNLGPHAQQP Trigger: TGGCTGTTGTGCATGAGGCCCTAGGTTCTGTTCCCAGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGGGAAGCACACGTTGGCTTTGTTGTTGCTACTGCTATTATTCCAGCACTAGCTGGCTCTCTCTTTaGCTCTGTGTGTGTGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PLGSTRWLCCCYCYYSSTSWLSL*LCVCVV Trigger: CACAACACACACACAGAGCAAAAGAGAGAGCCAGCT...AGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTTCCCAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTCTCAGAAAGGGACTGTAAGAAACAGTTTCTCCCTACACGCAGGTTGCTTGAGCTAGCACAAGACTaGTTCTGGAAAATGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GFSERDCKKQFLPTRRLLELAQD*FWKMLQ Trigger: CTGCAGCATTTTCCAGAACAAGTCTTGTGCTAGCTC...AAGCAACCTGCGTGTAGGGAGAAACTGTTTCTTACAGTCCCTTTCTGAGAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGGGAAGCACACGTTGGCTTTGTTGTTGCTACTGCTATTATTCCAGCACTGTCCTGCCTCTGCCTTaGAGATCAAGGGTTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PLGSTRWLCCCYCYYSSTVLPLP*RSRVLF Trigger: AAACAAAACCCTTGATCTCAAAGGCAGAGGCAGGAC...AGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTTCCCAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCACTAGGCGGAATACAGACCATGCAAAACAAACAAAGACCACCTCACACTCAGAGATCCACCTGTCTTaGTCTACTAAATGCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: STRRNTDHAKQTKTTSHSEIHLS*STKCWD Trigger: GTCCCAGCATTTAGTAGACAAAGACAGGTGGATCTC...TGAGTGTGAGGTGGTCTTTGTTTGTTTTGCATGGTCTGTATTCCGCCTAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CCA 72 bp | TGGAAGAATGAGATGACCGGGGAGATTCTGAGCAGCTaGGTTTCTCAGAAAGGGACTGTAAGAAACAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WKNEMTGEILSS*VSQKGTVRNSF Trigger: GAAACTGTTTCTTACAGTCCCTTTCTGAGAAACCCAGCTGCTCAGAATCTCCCCGGTCATCTCATTCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTATCAAGTATGGCCTGTaGCTCTTCTCCTATGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LCCCSWICFSLMLCKPVGIKYGL*LFSYAL Trigger: TAAAGCATAGGAGAAGAGCAACAGGCCATACTTGAT...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAACCATGTGGTTCACATTCCCATAAACTGCCACAACTGGCCAAAACTAAACATGCTGGGACTAAAGTaGTGTGCCACCACTTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: INHVVHIPINCHNWPKLNMLGLK*CATTYW Trigger: CCAGTAAGTGGTGGCACACAACTTTAGTCCCAGCAT...GTTTAGTTTTGGCCAGTTGTGGCAGTTTATGGGAATGTGAACCACATGGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTCAGCTAGAAACATCTTaGCAGGTTTTCAAGTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LCCCSWICFSLMLCKPVGQLETS*QVFKSD Trigger: GTCAGACTTGAAAACCTGCAAAGATGTTTCTAGCTG...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCACTAGGCGGAATACAGACCATGCAAAACAAACAAAGACCACCTCACACTCACTGCTGCTCTTGGATTaGTTTCTCACTCATGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: STRRNTDHAKQTKTTSHSLLLLD*FLTHVV Trigger: CACAACATGAGTGAGAAACAAATCCAAGAGCAGCAG...TGAGTGTGAGGTGGTCTTTGTTTGTTTTGCATGGTCTGTATTCCGCCTAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | GTTTTATATTTCTCTTTGGAGGACGACTTGGAAGAATaGGATGACCGGGGAGATTCTGAGCAGCTGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLYFSLEDDLEE*DDRGDSEQLGF Trigger: GAAACCCAGCTGCTCAGAATCTCCCCGGTCATCTCATTCTTCCAAGTCGTCCTCCAAAGAGAAATATAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR GCA 72 bp | CAAGCTAAACAGCATCACCCTTCTTCTCTCTGCTGCTaGTCTTGGATTTGTTTCTCACTCATGTTGTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QAKQHHPSSLCC*SWICFSLMLCK Trigger: CTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAGAGAAGAAGGGTGATGCTGTTTAGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | ATAAAACGTAATGAACGAGTGATGTTCCAGCATGGGTaGCTTTCACAGTCCTGTGCTAAGCAGTTTGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IKRNERVMFQHG*LSQSCAKQFGL Trigger: CAGACCAAACTGCTTAGCACAGGACTGTGAAAGTCACCCATGCTGGAACATCACTCGTTCATTACGTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR GCA 72 bp | TGTCTTTGTCTACTAAATGCTGGGACTAAAGTTGTGTaGCACCACTTACTGGCCTGGAATTCACACCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLCLLNAGTKVV*HHLLAWNSHHS Trigger: AGAATGGTGTGAATTCCAGGCCAGTAAGTGGTGGCACACAACTTTAGTCCCAGCATTTAGTAGACAAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCATATTCATTACAGTGGAAATCCAGGTGAGCTTTTCCTTCAGCATCTATTTGCTGTTCGATGATGGCTaGGAAGCTGTAGAGTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SIFITVEIQVSFSFSIYLLFDDG*EAVESD Trigger: GTCAGACTCTACAGCTTCCAAGCCATCATCGAACAG...CAAATAGATGCTGAAGGAAAAGCTCACCTGGATTTCCACTGTAATGAATATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| 3UTR TCA 72 bp | GATGGCTCTATCAGTAAAATGCTTGCTACAGAAGCATaGAAGTCTGAGTCTGATGCCCACCCATGTATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: DGSISKMLATEA*KSESDAHPCMY Trigger: ATACATACATGGGTGGGCATCAGACTCAGACTTTCATGCTTCTGTAGCAAGCATTTTACTGATAGAGCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | CACACTGTTCCAAATGCTCTCAAAGTACAGAGCAAATaGACTTCCAAGCTAAACAGCATCACCCTTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HTVPNALKVQSK*TSKLNSITLLL Trigger: GAGAAGAAGGGTGATGCTGTTTAGCTTGGAAGTTCATTTGCTCTGTACTTTGAGAGCATTTGGAACAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | CAAATACCGCAGAACAATAAGCCTGCTGTGTCACTCTaGGAATACAGAAGCAACTCCATTCAGTTTAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QIPQNNKPAVSL*EYRSNSIQFSV Trigger: GACACTAAACTGAATGGAGTTGCTTCTGTATTCTCAGAGTGACACAGCAGGCTTATTGTTCTGCGGTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR GCA 72 bp | AACTTGAATCAAGTATGGCCTGTTGCTCTTCTCCTATaGTTTATTAAGCAGAGTCTCAATGCAGTCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NLNQVWPVALLL*FIKQSLNAVQA Trigger: AGCCTGGACTGCATTGAGACTCTGCTTAATAAAGCATAGGAGAAGAGCAACAGGCCATACTTGATTCAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CCA 72 bp | GGTAGCAAGCCAGAAGAAGGATCTGAGTTTCATTCCTaGACCTATAGCGCTACTAGAAGAGTAGAGAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSKPEEGSEFHS*TYSATRRVENK Trigger: TTTATTCTCTACTCTTCTAGTAGCGCTATAGGTCCAGGAATGAAACTCAGATCCTTCTTCTGGCTTGCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR CCA 72 bp | CAGCTAGAAACATCTTTGCAGGTTTTCAAGTCTGACTaGAGAATTCATGGCATTCTCTACCATTACCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QLETSLQVFKSD*RIHGILYHYPR Trigger: TCTGGGGTAATGGTAGAGAATGCCATGAATTCTCCAGTCAGACTTGAAAACCTGCAAAGATGTTTCTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR TCA 72 bp | AATCCAGGTGAGCTTTTCCTTCAGCATCTATTTGAGTaGCAGCTACTACGGAAAGTAAGTCCAACTCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: NPGELFLQHLFE*QLLRKVSPTHL Trigger: AAGATGAGTTGGACTTACTTTCCGTAGTAGCTGTCACTCAAATAGATGCTGAAGGAAAAGCTCACCTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| 3UTR TCA 72 bp | ATGAATTTAATGGATAGAACGTTTGCTGTTTTGCCATaGACCATTTCTTCCTGTGGCGCCAGAAGCAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: MNLMDRTFAVLP*TISSCGARSNL Trigger: CAAGTTGCTTCTGGCGCCACAGGAAGAAATGGTTCATGGCAAAACAGCAAACGTTCTATCCATTAAATTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR GCA 72 bp | ATATTCACGTTAGCACCTAATGGAAATGTTTCAAAATaGTTGGTCTCTTGGGACAGCATCCTAGGGAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IFTLAPNGNVSK*LVSWDSILGSF Trigger: AAAGCTCCCTAGGATGCTGTCCCAAGAGACCAAGCATTTTGAAACATTTCCATTAGGTGCTAACGTGAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112167.9 ENSMUST00000154704.8 |
||
| 3UTR GCA 72 bp | AACACATATGCTAGGGAGATGGCTCTATCAGTAAAATaGTTGCTACAGAAGCATGAAAGTCTGAGTCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: NTYAREMALSVK*LLQKHESLSLM Trigger: CATCAGACTCAGACTTTCATGCTTCTGTAGCAAGCATTTTACTGATAGAGCCATCTCCCTAGCATATGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CCA 72 bp | ACACCTGATCTAATGTGCTGGGACACAGTTAAAACATaGACAGGTACAGTTAAGATACTGCATAAAAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: TPDLMCWDTVKT*TGTVKILHKST Trigger: GGTGCTTTTATGCAGTATCTTAACTGTACCTGTCCATGTTTTAACTGTGTCCCAGCACATTAGATCAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAACCATGTGGTTCACATTCCCATAAACTGCCACAACTGGCCAAAACTAAACCTATCAGTAAAATGCTaGCTACAGAAGCATGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: INHVVHIPINCHNWPKLNLSVKC*LQKHES Trigger: ACTTTCATGCTTCTGTAGCAAGCATTTTACTGATAG...GTTTAGTTTTGGCCAGTTGTGGCAGTTTATGGGAATGTGAACCACATGGTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR GCA 72 bp | ATACATAGGATATACAGTGTGCAAGGTTTGACTGAATaGAAAATTAGGTGGAAGGAGAGAAAGAGGCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: IHRIYSVQGLTE*KIRWKERKRHW Trigger: CCAATGCCTCTTTCTCTCCTTCCACCTAATTTTGCATTCAGTCAAACCTTGCACACTGTATATCCTATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR-3UTR CAA 90 bp | GTATTAGACTTTAACACGTTACTATCTTGTTCACGAGGTAATTACGTCTGTGTTGTTTTATATTTCTCTTaGGAGGACGACTTGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VLDFNTLLSCSRGNYVCVVLYFS*EDDLEE Trigger: TTCTTCCAAGTCGTCCTCCAAAGAGAAATATAAAAC...AACACAGACGTAATTACCTCGTGAACAAGATAGTAACGTGTTAAAGTCTAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCCACGCCTGCGTCGCGTaGATAGAAGCCCAGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVHACVA*IEAQSP Trigger: CGGGCTCTGGGCTTCTATGCACGCGACGCAGGCGTG...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTCCCAGGTTCGTCCTCTaGACCACGCCTGCGTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSPRFVL*TTPASR Trigger: ACGCGACGCAGGCGTGGTGCAGAGGACGAACCTGGG...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCCCAGCGCCCGCAGGATaGCCAGGTTCGTCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVPAPAG*PGSSSA Trigger: TGCAGAGGACGAACCTGGGCATCCTGCGGGCGCTGG...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCCCTCTGCACCACGCCTaGGTCGCGTGCATAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVPLHHA*VACIEA Trigger: GGCTTCTATGCACGCGACGCAGGCGTGGTGCAGAGG...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTTGCCTGGCGAGCCGCTaGGGAGCCTTTGTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSCLASR*GAFVLS Trigger: GCTCAGAACAAAGGCTCCGCAGCGGCTCGCCAGGCA...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTACTGCGATGACCTCCTaGGGTGTGTCCCAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSTAMTS*GVSQLR Trigger: CCTGAGCTGGGACACACCTCAGGAGGTCATCGCAGT...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTCCGACTTCACTGCGATaGCCTCCTGAGGTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSPTSLR*PPEVCP Trigger: GGGACACACCTCAGGAGGTCATCGCAGTGAAGTCGG...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTCAACAAAACGGGTGGTaGAGTGCCTGCCTGGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSQQNGW*SACLAS Trigger: GCTCGCCAGGCAGGCACTTCACCACCCGTTTTGTTG...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTCCAGTAGTCCCGCCCTaGCTGCATGCACACCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSPVVPP*LHAHPK Trigger: CTTAGGGTGTGCATGCAGTCAGGGCGGGACTACTGG...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR GCA 90 bp | GCAGAACCCGGAACACTGCGAGGTACAACAAAACGGGTGGTGAAGTGCCTGCCTCCCAGGTTCGTCCTCTaGACCACGCCTGCGTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AEPGTLRGTTKRVVKCLPPRFVL*TTPASR Trigger: ACGCGACGCAGGCGTGGTGCAGAGGACGAACCTGGG...AGGCAGGCACTTCACCACCCGTTTTGTTGTACCTCGCAGTGTTCCGGGTTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTAATTTAGTACTCTCCTaGCACACCAGCGCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSNLVLS*HTSARR Trigger: CCTGCGGGCGCTGGTGTGCCAGGAGAGTACTAAATT...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCCTGATGCAACACTGCTaGCACAGCACCGGTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVLMQHC*HSTGNC Trigger: ACAATTACCGGTGCTGTGTCAGCAGTGTTGCATCAG...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | GTATGTGACACACAGCTATGGTCTCAGCACTTGGGAGGCCAAGAGGGGAGCATCCCGACTTCACTGCGATaGCCTCCTGAGGTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCDTQLWSQHLGGQEGSIPTSLR*PPEVCP Trigger: GGGACACACCTCAGGAGGTCATCGCAGTGAAGTCGG...GATGCTCCCCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGGTAAACATAGCAGCTaGAGACCCTGTTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSGKHSS*RPCWAS Trigger: AGAAGCCCAACAGGGTCTTCAGCTGCTATGTTTACC...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCTGACATCAGTAGAAGACGGGAACAGGACCCCAGAAAATGCTGACCTTCACGCCTGCGTCGCGTaGATAGAAGCCCAGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WPLTSVEDGNRTPENADLHACVA*IEAQSP Trigger: CGGGCTCTGGGCTTCTATGCACGCGACGCAGGCGTG...AAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTTCTACTGATGTCAGAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR GCA 90 bp | AAGACGGGAACAGGACCCCAGAAAATGCTGACCTTAAGCAAGGTGAAGGGTGCTCCCAGGTTCGTCCTCTaGACCACGCCTGCGTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KTGTGPQKMLTLSKVKGAPRFVL*TTPASR Trigger: ACGCGACGCAGGCGTGGTGCAGAGGACGAACCTGGG...AGCACCCTTCACCTTGCTTAAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR GCA 90 bp | AAGACGGGAACAGGACCCCAGAAAATGCTGACCTTAAGCAAGGTGAAGGGTGCTCCAGCGCCCGCAGGATaGCCAGGTTCGTCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTGTGPQKMLTLSKVKGAPAPAG*PGSSSA Trigger: TGCAGAGGACGAACCTGGGCATCCTGCGGGCGCTGG...AGCACCCTTCACCTTGCTTAAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGGATGGCCTCCAATCTaGAATGCGTTCTCCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSGWPPI*NAFSRD Trigger: ATCTCTGGAGAACGCATTCCAGATTGGAGGCCATCC...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTTGCGTTCTCCAGAGATaGAACTTCAAAGAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSCVLQR*NFKEWR Trigger: CCTCCACTCTTTGAAGTTTCATCTCTGGAGAACGCA...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTCAGTGGAAATCCAGGTaGGCTTTTCCTTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSQWKSR*AFPSAS Trigger: AGATGCTGAAGGAAAAGCTCACCTGGATTTCCACTG...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTCTCATAGGCTATAGGTaGCTTGGAATGAGTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSLIGYR*LGMSCP Trigger: TGGACAACTCATTCCAAGTCACCTATAGCCTATGAG...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCAATCAGGATTCCATGTaGCAAGGTAGCATCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVNQDSM*QGSICD Trigger: GTCACAGATGCTACCTTGTCACATGGAATCCTGATT...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTCCAGTAGTCCCGCCCTaGCTGCATGCACACCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRSHPQNHREQKLAPGFSPVVPP*LHAHPK Trigger: CTTAGGGTGTGCATGCAGTCAGGGCGGGACTACTGG...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCCATCATCCAGAAGGCTaGCATTTCTTTTCACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVHHPEG*HFFSPH Trigger: GTGTGGTGAAAAGAAATGTCAGCCTTCTGGATGATG...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCCCTTCAGCATCTATTTaGGTGACAGCTACTACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVPSASI*VTATTE Trigger: TTCCGTAGTAGCTGTCACTCAAATAGATGCTGAAGG...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR GCA 90 bp | CTGACTAGTCCCGAGCTGTACATCACAATCAGGATTCCATGTGACAAGGTAGCACCAGCGCCCGCAGGATaGCCAGGTTCGTCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSPELYITIRIPCDKVAPAPAG*PGSSSA Trigger: TGCAGAGGACGAACCTGGGCATCCTGCGGGCGCTGG...TGCTACCTTGTCACATGGAATCCTGATTGTGATGTACAGCTCGGGACTAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| CDS-3UTR CCA 90 bp | CACCATGTATGTGACACACAGCTATGGTCTCAGCACTTGGGAGGCCAAGAGGGGAATTTAGTACTCTCCTaGCACACCAGCGCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHVCDTQLWSQHLGGQEGNLVLS*HTSARR Trigger: CCTGCGGGCGCTGGTGTGCCAGGAGAGTACTAAATT...CCCCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATACATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| 3UTR CAA 72 bp | CACCATGTATGTGACACACAGCTATGGTCTCAGCACTaGGGAGGCCAAGAGGGGAGCATCAGGTGTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHVCDTQLWSQH*GGQEGSIRCAR Trigger: CCTTGCACACCTGATGCTCCCCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATACATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCCATAGTCCACGATTTTaGAAGTCTCTTGTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVHSPRF*KSLVLG Trigger: ACCCAGAACAAGAGACTTTCAAAATCGTGGACTATG...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCCAGCATCTATTTGAGTaGCAGCTACTACGGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVQHLFE*QLLRKV Trigger: TACTTTCCGTAGTAGCTGTCACTCAAATAGATGCTG...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTCAGAAAGGGACTGTAAGAAACAGTTTCTCCCTACACGCAGGTTGCTTCACGCCTGCGTCGCGTaGATAGAAGCCCAGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GFSERDCKKQFLPTRRLLHACVA*IEAQSP Trigger: CGGGCTCTGGGCTTCTATGCACGCGACGCAGGCGTG...AAGCAACCTGCGTGTAGGGAGAAACTGTTTCTTACAGTCCCTTTCTGAGAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTTCACCGAGGGGAATGGACCGTGGGAACTGTTGGATGTGACCAAAGAGTGCTGATGCAACACTGCTaGCACAGCACCGGTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFHRGEWTVGTVGCDQRVLMQHC*HSTGNC Trigger: ACAATTACCGGTGCTGTGTCAGCAGTGTTGCATCAG...CACTCTTTGGTCACATCCAACAGTTCCCACGGTCCATTCCCCTCGGTGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTACTGCGATGACCTCCTaGGGTGTGTCCCAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCCCSWICFSLMLCKPVGTAMTS*GVSQLR Trigger: CCTGAGCTGGGACACACCTCAGGAGGTCATCGCAGT...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTCCGACTTCACTGCGATaGCCTCCTGAGGTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCCCSWICFSLMLCKPVGPTSLR*PPEVCP Trigger: GGGACACACCTCAGGAGGTCATCGCAGTGAAGTCGG...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | CATTGGGGTAGCAAGCCAGAAGAAGGATCTGAGTTTCATTCCTGGACCTATAGCCAACAAAACGGGTGGTaGAGTGCCTGCCTGGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HWGSKPEEGSEFHSWTYSQQNGW*SACLAS Trigger: GCTCGCCAGGCAGGCACTTCACCACCCGTTTTGTTG...GCTATAGGTCCAGGAATGAAACTCAGATCCTTCTTCTGGCTTGCTACCCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTAAAGAGTGGAGGTGGTaGGTCTGTGATTTTAACATT | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSKEWRW*VCDFNI Trigger: AATGTTAAAATCACAGACTCACCACCTCCACTCTTT...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCCTAGTGGGATGCTTTTaGGTAAGGTTCCATATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVLVGCF*VRFHIH Trigger: ATGAATATGGAACCTTACTCAAAAGCATCCCACTAG...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR GCA 90 bp | TGCTTTATTAAGCAGAGTCTCAATGCAGTCCAGGCTGGCTCTGAACTCATTACACCCAGGTTCGTCCTCTaGACCACGCCTGCGTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CFIKQSLNAVQAGSELITPRFVL*TTPASR Trigger: ACGCGACGCAGGCGTGGTGCAGAGGACGAACCTGGG...TGTAATGAGTTCAGAGCCAGCCTGGACTGCATTGAGACTCTGCTTAATAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTTATTAAGCAGAGTCTCAATGCAGTCCAGGCTGGCTCTGAACTCATTACACCAGCGCCCGCAGGATaGCCAGGTTCGTCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFIKQSLNAVQAGSELITPAPAG*PGSSSA Trigger: TGCAGAGGACGAACCTGGGCATCCTGCGGGCGCTGG...TGTAATGAGTTCAGAGCCAGCCTGGACTGCATTGAGACTCTGCTTAATAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR GCA 90 bp | AGCCATCTCAGCGCCAACACTGTGAACTCCATCTGGTTCTGTTCTCTTCAAAATTGCCTGGCGAGCCGCTaGGGAGCCTTTGTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLSANTVNSIWFCSLQNCLASR*GAFVLS Trigger: GCTCAGAACAAAGGCTCCGCAGCGGCTCGCCAGGCA...ATTTTGAAGAGAACAGAACCAGATGGAGTTCACAGTGTTGGCGCTGAGATGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR GCA 90 bp | CCTAATGGAAATGTTTCAAAATGCTTGGTCTCTTGGGACAGCATCCTAGGGAGCTGCCTGGCGAGCCGCTaGGGAGCCTTTGTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNGNVSKCLVSWDSILGSCLASR*GAFVLS Trigger: GCTCAGAACAAAGGCTCCGCAGCGGCTCGCCAGGCA...GCTCCCTAGGATGCTGTCCCAAGAGACCAAGCATTTTGAAACATTTCCATTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | CTGAAAACACACGGTAGGTGGCTCTTGAGAACACCATaGGCTGACATCTGGCCTCCAAACGCACATGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LKTHGRWLLRTP*ADIWPPNAHAH Trigger: GTGTGCATGTGCGTTTGGAGGCCAGATGTCAGCCAATGGTGTTCTCAAGAGCCACCTACCGTGTGTTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | TACTCCCAGGCAGGAAAGAACTCCTCTTGGTTTCAATaGTGCTACAAGGAAGAGGCCACCAGGGGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSQAGKNSSWFQ*CYKEEATRGQQ Trigger: TTGCTGGCCCCTGGTGGCCTCTTCCTTGTAGCACAATTGAAACCAAGAGGAGTTCTTTCCTGCCTGGGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTATAGGTGACTTGGAATaGGTTGTCCAAACATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSIGDLE*VVQTFL Trigger: TAAGAATGTTTGGACAACTCATTCCAAGTCACCTAT...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR TCA 90 bp | AGCCATCTCAGCGCCAACACTGTGAACTCCATCTGGTTCTGTTCTCTTCAAAATACTGCGATGACCTCCTaGGGTGTGTCCCAGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLSANTVNSIWFCSLQNTAMTS*GVSQLR Trigger: CCTGAGCTGGGACACACCTCAGGAGGTCATCGCAGT...ATTTTGAAGAGAACAGAACCAGATGGAGTTCACAGTGTTGGCGCTGAGATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR TCA 90 bp | GGTTTCTCAGAAAGGGACTGTAAGAAACAGTTTCTCCCTACACGCAGGTTGCTTCAACAAAACGGGTGGTaGAGTGCCTGCCTGGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFSERDCKKQFLPTRRLLQQNGW*SACLAS Trigger: GCTCGCCAGGCAGGCACTTCACCACCCGTTTTGTTG...AAGCAACCTGCGTGTAGGGAGAAACTGTTTCTTACAGTCCCTTTCTGAGAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGTTTGGGCCAACATGTATTATTCTTCCAGAAGCATCAGGGTGGAAATAGACACGCCTGCGTCGCGTaGATAGAAGCCCAGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGLGQHVLFFQKHQGGNRHACVA*IEAQSP Trigger: CGGGCTCTGGGCTTCTATGCACGCGACGCAGGCGTG...TCTATTTCCACCCTGATGCTTCTGGAAGAATAATACATGTTGGCCCAAACCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTAAGTCAAGTTTCTGTTaGATGAACTGTTCGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSKSSFC*MNCSMM Trigger: CATCATCGAACAGTTCATGCAACAGAAACTTGACTT...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCGACTTTGACTTGGTTTaGGCCAACATGTATTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQAHPELEASLGYRVRSVDFDLV*ANMYYS Trigger: AGAATAATACATGTTGGCCCAAACCAAGTCAAAGTC...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTTTCAAGACTTTGACTTaGTTTGGGCCAACATGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LRQAHPELEASLGYRVRSFKTLT*FGPTCI Trigger: AATACATGTTGGCCCAAACCAAGTCAAAGTCTTGAA...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
||
| 3UTR CAA 72 bp | GGAGACAGCCGGACCTTTGGGAAGCACACGTTGGCTTaGTTGTTGCTACTGCTATTATTCCAGCACTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GDSRTFGKHTLA*LLLLLLFQHWE Trigger: TTCCCAGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTTCCCAAAGGTCCGGCTGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTTGTCCTGAAACTCACACTGAAGACCAGGCTGGCCTTGAAGTCAGAGATCAGTGGAAATCCAGGTaGGCTTTTCCTTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGCPETHTEDQAGLEVRDQWKSR*AFPSAS Trigger: AGATGCTGAAGGAAAAGCTCACCTGGATTTCCACTG...ATCTCTGACTTCAAGGCCAGCCTGGTCTTCAGTGTGAGTTTCAGGACAACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTCAGAAAGGGACTGTAAGAAACAGTTTCTCCCTACACGCAGGTTGCTTAATTTAGTACTCTCCTaGCACACCAGCGCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSERDCKKQFLPTRRLLNLVLS*HTSARR Trigger: CCTGCGGGCGCTGGTGTGCCAGGAGAGTACTAAATT...AAGCAACCTGCGTGTAGGGAGAAACTGTTTCTTACAGTCCCTTTCTGAGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | GCTGTCTTCAGACACTCCAGAAGAGGTAGTCAGATCTaGTTACGGATGGTTGTGAGCCACCATGTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHSRRGSQI*LRMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCCGTAACAAGATCTGACTACCTCTTCTGGAGTGTCTGAAGACAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | CTGACTAGTCCCGAGCTGTACATCACAATCAGGATTCCATGTGACAAGGTAGCACTGATGCAACACTGCTaGCACAGCACCGGTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSPELYITIRIPCDKVALMQHC*HSTGNC Trigger: ACAATTACCGGTGCTGTGTCAGCAGTGTTGCATCAG...TGCTACCTTGTCACATGGAATCCTGATTGTGATGTACAGCTCGGGACTAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| CDS-3UTR TCA 90 bp | AAGACGGGAACAGGACCCCAGAAAATGCTGACCTTAAGCAAGGTGAAGGGTGCTAATCAGGATTCCATGTaGCAAGGTAGCATCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTGTGPQKMLTLSKVKGANQDSM*QGSICD Trigger: GTCACAGATGCTACCTTGTCACATGGAATCCTGATT...AGCACCCTTCACCTTGCTTAAGGTCAGCATTTTCTGGGGTCCTGTTCCCGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTCCTTCAGCATCTATTTaGGTGACAGCTACTACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRSHPQNHREQKLAPGFSPSASI*VTATTE Trigger: TTCCGTAGTAGCTGTCACTCAAATAGATGCTGAAGG...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | CTAATGAGGTTACTCCCAGGCAGGAAAGAACTCCTCTaGGTTTCAATTGTGCTACAAGGAAGAGGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMRLLPGRKELL*VSIVLQGRGHQ Trigger: CTGGTGGCCTCTTCCTTGTAGCACAATTGAAACCAAGAGGAGTTCTTTCCTGCCTGGGAGTAACCTCATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTaGTGCAAGCCTGTTGGTCAATGGGTCAGGTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCCCSWICFSLM*CKPVGQWVRYG Trigger: ACCATACCTGACCCATTGACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | CATTGGGGTAGCAAGCCAGAAGAAGGATCTGAGTTTCATTCCTGGACCTATAGCTGCGTTCTCCAGAGATaGAACTTCAAAGAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HWGSKPEEGSEFHSWTYSCVLQR*NFKEWR Trigger: CCTCCACTCTTTGAAGTTTCATCTCTGGAGAACGCA...GCTATAGGTCCAGGAATGAAACTCAGATCCTTCTTCTGGCTTGCTACCCCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCTGAAACTCACACTGAAGACCAGGCTGGCCTTGAAGTCAGAGATCCACCTCAGCATCTATTTGAGTaGCAGCTACTACGGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CPETHTEDQAGLEVRDPPQHLFE*QLLRKV Trigger: TACTTTCCGTAGTAGCTGTCACTCAAATAGATGCTG...AGGTGGATCTCTGACTTCAAGGCCAGCCTGGTCTTCAGTGTGAGTTTCAGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTCAATGGGTCAGGTATGGTACTGATGCAACACTGCTaGCACAGCACCGGTAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVSHSCCASLLVNGSGMVLMQHC*HSTGNC Trigger: ACAATTACCGGTGCTGTGTCAGCAGTGTTGCATCAG...TACCATACCTGACCCATTGACCAACAGGCTTGCACAACATGAGTGAGAAACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTAATCAGGATTCCATGTaGCAAGGTAGCATCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCCCSWICFSLMLCKPVGNQDSM*QGSICD Trigger: GTCACAGATGCTACCTTGTCACATGGAATCCTGATT...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCTGAAACTCACACTGAAGACCAGGCTGGCCTTGAAGTCAGAGATCCACCTAAAGAGTGGAGGTGGTaGGTCTGTGATTTTAACATT | + |
|
Preference number: 4 (lower is better) Translates to: CPETHTEDQAGLEVRDPPKEWRW*VCDFNI Trigger: AATGTTAAAATCACAGACTCACCACCTCCACTCTTT...AGGTGGATCTCTGACTTCAAGGCCAGCCTGGTCTTCAGTGTGAGTTTCAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTGCTGCTCTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTTGGTCATCATCCAGAAGGCTaGCATTTCTTTTCACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LCCCSWICFSLMLCKPVGHHPEG*HFFSPH Trigger: GTGTGGTGAAAAGAAATGTCAGCCTTCTGGATGATG...ACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAGAGCAGCAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGTACATCACAATCAGGATTCCATGTGACAAGGTAGCATCTGTGACATTCGCTGGGGCAGAGTTCTaGATTTGCAGTAGGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ELYITIRIPCDKVASVTFAGAEF*ICSRKQ Trigger: TTGCTTCCTACTGCAAATTCAGAACTCTGCCCCAGC...GAATGTCACAGATGCTACCTTGTCACATGGAATCCTGATTGTGATGTACAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
||
| 3UTR CAA 72 bp | CTTGGATTTGTTTCTCACTCATGTTGTGCAAGCCTGTaGGTCAATGGGTCAGGTATGGTAGACATCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGFVSHSCCASL*VNGSGMVDIPA Trigger: TGCTGGGATGTCTACCATACCTGACCCATTGACCAACAGGCTTGCACAACATGAGTGAGAAACAAATCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | TTCACCATGTATGTGACACACAGCTATGGTCTCAGCACTTGGGAGGCCAAGAGGATAGGTGACTTGGAATaGGTTGTCCAAACATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FTMYVTHSYGLSTWEAKRIGDLE*VVQTFL Trigger: TAAGAATGTTTGGACAACTCATTCCAAGTCACCTAT...CCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATACATGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTTATTAAGCAGAGTCTCAATGCAGTCCAGGCTGGCTCTGAACTCATTACATGCGTTCTCCAGAGATaGAACTTCAAAGAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFIKQSLNAVQAGSELITCVLQR*NFKEWR Trigger: CCTCCACTCTTTGAAGTTTCATCTCTGGAGAACGCA...TGTAATGAGTTCAGAGCCAGCCTGGACTGCATTGAGACTCTGCTTAATAAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | ATCAACCATGTGGTTCACATTCCCATAAACTGCCACAACTGGCCAAAACTAAACGGTAAACATAGCAGCTaGAGACCCTGTTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: INHVVHIPINCHNWPKLNGKHSS*RPCWAS Trigger: AGAAGCCCAACAGGGTCTTCAGCTGCTATGTTTACC...GTTTAGTTTTGGCCAGTTGTGGCAGTTTATGGGAATGTGAACCACATGGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTAAGTCAAGTTTCTGTTaGATGAACTGTTCGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: QRSHPQNHREQKLAPGFSKSSFC*MNCSMM Trigger: CATCATCGAACAGTTCATGCAACAGAAACTTGACTT...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR CCA 90 bp | TCCATATTCATTACAGTGGAAATCCAGGTGAGCTTTTCCTTCAGCATCTATTTGAATTTAGTACTCTCCTaGCACACCAGCGCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIFITVEIQVSFSFSIYLNLVLS*HTSARR Trigger: CCTGCGGGCGCTGGTGTGCCAGGAGAGTACTAAATT...CAAATAGATGCTGAAGGAAAAGCTCACCTGGATTTCCACTGTAATGAATATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTGACTTTGACTTGGTTTaGGCCAACATGTATTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRSHPQNHREQKLAPGFSDFDLV*ANMYYS Trigger: AGAATAATACATGTTGGCCCAAACCAAGTCAAAGTC...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGATCACACCCACAGAACCACAGGGAGCAGAAACTAGCTCCTGGGTTTTCTTTCAAGACTTTGACTTaGTTTGGGCCAACATGTATT | + |
|
Preference number: 4 (lower is better) Translates to: QRSHPQNHREQKLAPGFSFKTLT*FGPTCI Trigger: AATACATGTTGGCCCAAACCAAGTCAAAGTCTTGAA...AGAAAACCCAGGAGCTAGTTTCTGCTCCCTGTGGTTCTGTGGGTGTGATCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | AGAGTTCAACCTAGTCCTTTGGAGCTAGCACAAGACTaGTTCTGGAAAATGCTGCAGAATGTTCCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVQPSPLELAQD*FWKMLQNVPCR Trigger: TCTGCATGGAACATTCTGCAGCATTTTCCAGAACAAGTCTTGTGCTAGCTCCAAAGGACTAGGTTGAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112167.9 ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | ACATATGCTAGGGAGATGGCTCTATCAGTAAAATGCTaGCTACAGAAGCATGAAAGTCTGAGTCTGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TYAREMALSVKC*LQKHESLSLMP Trigger: GGGCATCAGACTCAGACTTTCATGCTTCTGTAGCAAGCATTTTACTGATAGAGCCATCTCCCTAGCATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | CCTAATGGAAATGTTTCAAAATGCTTGGTCTCTTGGGACAGCATCCTAGGGAGCCTAGTGGGATGCTTTTaGGTAAGGTTCCATATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PNGNVSKCLVSWDSILGSLVGCF*VRFHIH Trigger: ATGAATATGGAACCTTACTCAAAAGCATCCCACTAG...GCTCCCTAGGATGCTGTCCCAAGAGACCAAGCATTTTGAAACATTTCCATTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | TTCACGTTAGCACCTAATGGAAATGTTTCAAAATGCTaGGTCTCTTGGGACAGCATCCTAGGGAGCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FTLAPNGNVSKC*VSWDSILGSFY Trigger: GTAAAAGCTCCCTAGGATGCTGTCCCAAGAGACCAAGCATTTTGAAACATTTCCATTAGGTGCTAACGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112167.9 ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | AGCACTAGGCGGAATACAGACCATGCAAAACAAACAAAGACCACCTCACACTCAATAGGTGACTTGGAATaGGTTGTCCAAACATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: STRRNTDHAKQTKTTSHSIGDLE*VVQTFL Trigger: TAAGAATGTTTGGACAACTCATTCCAAGTCACCTAT...TGAGTGTGAGGTGGTCTTTGTTTGTTTTGCATGGTCTGTATTCCGCCTAGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | ATCAACCATGTGGTTCACATTCCCATAAACTGCCACAACTGGCCAAAACTAAACCATAGTCCACGATTTTaGAAGTCTCTTGTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: INHVVHIPINCHNWPKLNHSPRF*KSLVLG Trigger: ACCCAGAACAAGAGACTTTCAAAATCGTGGACTATG...GTTTAGTTTTGGCCAGTTGTGGCAGTTTATGGGAATGTGAACCACATGGTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | TTTCTACCATATGTGGTAAGAGTTCAACCTAGTCCTTaGGAGCTAGCACAAGACTTGTTCTGGAAAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLPYVVRVQPSP*ELAQDLFWKML Trigger: CAGCATTTTCCAGAACAAGTCTTGTGCTAGCTCCAAAGGACTAGGTTGAACTCTTACCACATATGGTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112167.9 ENSMUST00000154704.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTTTTGTTGATCTCTAGAATCCCTACAAGTGAAAAGGGCAGAACCCGGAACATAGGTGACTTGGAATaGGTTGTCCAAACATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TFLLISRIPTSEKGRTRNIGDLE*VVQTFL Trigger: TAAGAATGTTTGGACAACTCATTCCAAGTCACCTAT...GTTCCGGGTTCTGCCCTTTTCACTTGTAGGGATTCTAGAGATCAACAAAAAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
||
| 3UTR CAA 72 bp | AGGGACTGTAAGAAACAGTTTCTCCCTACACGCAGGTaGCTTTTAACTAACATTCTGAAAGTGATTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDCKKQFLPTRR*LLTNILKVITG Trigger: TCCAGTAATCACTTTCAGAATGTTAGTTAAAAGCAACCTGCGTGTAGGGAGAAACTGTTTCTTACAGTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | TCTTCCAAGTTAAAATTCCATATTTTAACCTTAAACTaGAATCAAGTATGGCCTGTTGCTCTTCTCCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKLKFHILTLN*NQVWPVALLLC Trigger: GCATAGGAGAAGAGCAACAGGCCATACTTGATTCAAGTTTAAGGTTAAAATATGGAATTTTAACTTGGAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| 3UTR CAA 72 bp | CATACGCTGGTAATGCATGACCCAATGCTTTCAATTTaGAGAAGGATTTGGATTACACAATCATTAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: HTLVMHDPMLSI*RRIWITQSLKT Trigger: AGTTTTTAATGATTGTGTAATCCAAATCCTTCTCAAAATTGAAAGCATTGGGTCATGCATTACCAGCGTATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
||
| CDS CCA 90 bp | CCCTGCAAGGCTCTGGCCACGCGTCCAGAGGGGCGTTGTGGCCAGTaGGACCCTCCAAAGGTACGCCCCGTGGCTTTCCCTCAGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PCKALATRPEGRCGQ*DPPKVRPVAFPQPH Trigger: GTGCGGCTGAGGGAAAGCCACGGGGCGTACCTTTGGAGGGTCCCACTGGCCACAACGCCCCTCTGGACGCGTGGCCAGAGCCTTGCAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
||
| CDS GCA 90 bp | CCGCAGGATGCCCAGGTTCGTCCTCTGCACCACGCCTGCGTCGCGTaGATAGAAGCCCAGAGCCCGGCGACTCAGCCTGCGGCACACATT | + |
|
Preference number: 5 (lower is better) Translates to: PQDAQVRPLHHACVA*IEAQSPATQPAAHI Trigger: AATGTGTGCCGCAGGCTGAGTCGCCGGGCTCTGGGCTTCTATGCACGCGACGCAGGCGTGGTGCAGAGGACGAACCTGGGCATCCTGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064141.12 ENSMUST00000102701.5 ENSMUST00000112159.9 ENSMUST00000112167.9 ENSMUST00000154704.8 |
||
| CDS CCA 90 bp | CCTTTGGCCCTGCAAGGCTCTGGCCACGCGTCCAGAGGGGCGTTGTaGCCAGTGGGACCCTCCAAAGGTACGCCCCGTGGCTTTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLALQGSGHASRGAL*PVGPSKGTPRGFPS Trigger: TGAGGGAAAGCCACGGGGCGTACCTTTGGAGGGTCCCACTGGCCACAACGCCCCTCTGGACGCGTGGCCAGAGCCTTGCAGGGCCAAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS-3UTR CAA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCAGCCTGCGGCACACATaGGCCTTCCGGGTCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQAHPELEASLGYRVRSVSLRHT*AFRVRP Trigger: GGGCCGGACCCGGAAGGCCAATGTGTGCCGCAGGCT...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
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| CDS GCA 90 bp | TGTGTCCCAGGAAGCAGTCCCTTTCTGCCCTGGTCGTGGGACGACTaGCAACCCCTCCTTTGGCCCTGCAAGGCTCTGGCCACGCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CVPGSSPFLPWSWDD*QPLLWPCKALATRP Trigger: TGGACGCGTGGCCAGAGCCTTGCAGGGCCAAAGGAGGGGTTGGCAGTCGTCCCACGACCAGGGCAGAAAGGGACTGCTTCCTGGGACACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS CCA 90 bp | ACTCTCCTGTGTGTCCCAGGAAGCAGTCCCTTTCTGCCCTGGTCGTaGGACGACTGCCAACCCCTCCTTTGGCCCTGCAAGGCTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLCVPGSSPFLPWS*DDCQPLLWPCKALA Trigger: GGCCAGAGCCTTGCAGGGCCAAAGGAGGGGTTGGCAGTCGTCCCACGACCAGGGCAGAAAGGGACTGCTTCCTGGGACACACAGGAGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS-3UTR CAA 90 bp | CACCATGTATGTGACACACAGCTATGGTCTCAGCACTTGGGAGGCCAAGAGGGGAGCCTGCGGCACACATaGGCCTTCCGGGTCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HHVCDTQLWSQHLGGQEGSLRHT*AFRVRP Trigger: GGGCCGGACCCGGAAGGCCAATGTGTGCCGCAGGCT...CCCCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATACATGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| CDS-3UTR CAA 90 bp | CAAGTGAAAAGGGCAGAACCCGGAACACTGCGAGGTACAACAAAACGGGTGGTGAGCCTGCGGCACACATaGGCCTTCCGGGTCCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: QVKRAEPGTLRGTTKRVVSLRHT*AFRVRP Trigger: GGGCCGGACCCGGAAGGCCAATGTGTGCCGCAGGCT...CACCACCCGTTTTGTTGTACCTCGCAGTGTTCCGGGTTCTGCCCTTTTCACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112167.9 |
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| CDS-3UTR CAA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTCAGCTGAAGACCCTGTaGGGCTTCTGTTCGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: LRQAHPELEASLGYRVRSQLKTL*GFCSMC Trigger: GCACATCGAACAGAAGCCCAACAGGGTCTTCAGCTG...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
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| CDS GCA 90 bp | TGCCTGGCGAGCCGCTGCGGAGCCTTTGTTCTGAGCCGACTTCACTaGGATGACCTCCTGAGGTGTGTCCCAGCTCAGGTACCTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: CLASRCGAFVLSRLH*DDLLRCVPAQVPEF Trigger: AAATTCAGGTACCTGAGCTGGGACACACCTCAGGAGGTCATCGCAGTGAAGTCGGCTCAGAACAAAGGCTCCGCAGCGGCTCGCCAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064141.12 ENSMUST00000102701.5 ENSMUST00000112159.9 ENSMUST00000130292.8 ENSMUST00000135357.8 ENSMUST00000154704.8 |
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| CDS CCA 90 bp | TTTAGTACTCTCCTGTGTGTCCCAGGAAGCAGTCCCTTTCTGCCCTaGTCGTGGGACGACTGCCAACCCCTCCTTTGGCCCTGCAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: FSTLLCVPGSSPFLP*SWDDCQPLLWPCKA Trigger: AGCCTTGCAGGGCCAAAGGAGGGGTTGGCAGTCGTCCCACGACCAGGGCAGAAAGGGACTGCTTCCTGGGACACACAGGAGAGTACTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTCTGTTCGATGATGGCTaGGAAGCTGTAGAGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRQAHPELEASLGYRVRSLFDDG*EAVESD Trigger: GTCAGACTCTACAGCTTCCAAGCCATCATCGAACAG...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
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| CDS-3UTR CAA 90 bp | CCTAATGGAAATGTTTCAAAATGCTTGGTCTCTTGGGACAGCATCCTAGGGAGCAGCCTGCGGCACACATaGGCCTTCCGGGTCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PNGNVSKCLVSWDSILGSSLRHT*AFRVRP Trigger: GGGCCGGACCCGGAAGGCCAATGTGTGCCGCAGGCT...GCTCCCTAGGATGCTGTCCCAAGAGACCAAGCATTTTGAAACATTTCCATTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112167.9 ENSMUST00000154704.8 |
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| CDS GCA 90 bp | TTAAATTTAGTACTCTCCTGTGTGTCCCAGGAAGCAGTCCCTTTCTaGCCTGGTCGTGGGACGACTGCCAACCCCTCCTTTGGCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LNLVLSCVSQEAVPF*PGRGTTANPSFGPA Trigger: TGCAGGGCCAAAGGAGGGGTTGGCAGTCGTCCCACGACCAGGGCAGAAAGGGACTGCTTCCTGGGACACACAGGAGAGTACTAAATTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTCTTAGCTTCAAGACTTaGACTTGGTTTGGGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LRQAHPELEASLGYRVRSLSFKT*TWFGPT Trigger: TGTTGGCCCAAACCAAGTCAAAGTCTTGAAGCTAAG...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
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| CDS-3UTR CAA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTTCCTTCAGCATCTATTaGAGTGACAGCTACTACGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRQAHPELEASLGYRVRSSFSIY*SDSYYG Trigger: TCCGTAGTAGCTGTCACTCAAATAGATGCTGAAGGA...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
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| CDS-3UTR CAA 90 bp | AGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTGTCGATTTTGAAAGTCTCTaGTTCTGGGTCATCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQAHPELEASLGYRVRSVDFESL*FWVIIQ Trigger: CTGGATGATGACCCAGAACAAGAGACTTTCAAAATC...GACAGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
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| CDS-3UTR CAA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTTTTCATAAAGTTTTCTaGGCTCTGATGCAACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRQAHPELEASLGYRVRSFHKVF*ALMQHC Trigger: GCAGTGTTGCATCAGAGCCAAGAAAACTTTATGAAA...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
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| CDS-3UTR CAA 90 bp | GTATGTGACACACAGCTATGGTCTCAGCACTTGGGAGGCCAAGAGGGGAGCATCCTGTTCGATGATGGCTaGGAAGCTGTAGAGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VCDTQLWSQHLGGQEGSILFDDG*EAVESD Trigger: GTCAGACTCTACAGCTTCCAAGCCATCATCGAACAG...GATGCTCCCCTCTTGGCCTCCCAAGTGCTGAGACCATAGCTGTGTGTCACATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112159.9 |
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| CDS-3UTR CAA 90 bp | CTGAGGCAGGCCCACCCTGAGTTGGAGGCCAGCCTGGGCTATAGAGTGCGATCTACTAGTGGGATGCTTTaGAGTAAGGTTCCATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRQAHPELEASLGYRVRSTSGML*SKVPYS Trigger: TGAATATGGAACCTTACTCAAAAGCATCCCACTAGT...AGATCGCACTCTATAGCCCAGGCTGGCCTCCAACTCAGGGTGGGCCTGCCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064141.12 |
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| CDS-3UTR CAA 90 bp | AGTGAAAAGGGCAGAACCCGGAACACTGCGAGGTACAACAAAACGGGTGGTGAATTAGGTGGTAACAGCTaGGAAGGCTGGGGCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SEKGRTRNTARYNKTGGELGGNS*EGWGRV Trigger: AACTCTGCCCCAGCCTTCCAAGCTGTTACCACCTAA...TTCACCACCCGTTTTGTTGTACCTCGCAGTGTTCCGGGTTCTGCCCTTTTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
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| CDS-3UTR CAA 90 bp | TATCAAGGTCAGCAGCAGACACAAGCCATTCAGACTCACAGCTGGGCATGGAGGCTTAGCTTCAAGACTTaGACTTGGTTTGGGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: YQGQQQTQAIQTHSWAWRLSFKT*TWFGPT Trigger: TGTTGGCCCAAACCAAGTCAAAGTCTTGAAGCTAAG...CCTCCATGCCCAGCTGTGAGTCTGAATGGCTTGTGTCTGCTGCTGACCTTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| CDS-3UTR CAA 90 bp | GGTTTCTCAGAAAGGGACTGTAAGAAACAGTTTCTCCCTACACGCAGGTTGCTTCAGCTGAAGACCCTGTaGGGCTTCTGTTCGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GFSERDCKKQFLPTRRLLQLKTL*GFCSMC Trigger: GCACATCGAACAGAAGCCCAACAGGGTCTTCAGCTG...AAGCAACCTGCGTGTAGGGAGAAACTGTTTCTTACAGTCCCTTTCTGAGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| CDS GCA 90 bp | GCAGTAGGAAGCAAGGTATATTTTCTCCAGGACTTCCCCTGTAGTTaGGGATATACGAAGCAGCCAATTATGAGCAGTCAGGGCTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVGSKVYFLQDFPCS*GYTKQPIMSSQGYE Trigger: CTCATAGCCCTGACTGCTCATAATTGGCTGCTTCGTATATCCGCAACTACAGGGGAAGTCCTGGAGAAAATATACCTTGCTTCCTACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000064141.12 ENSMUST00000102701.5 ENSMUST00000112159.9 ENSMUST00000112167.9 ENSMUST00000130292.8 ENSMUST00000135357.8 ENSMUST00000154704.8 |
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| CDS-3UTR CAA 90 bp | GATGGTAAGTATGCCTTTAGTCCCAGTGCTGGGAAAGAGACAGCAGCATCCCTGGATTTTGAAAGTCTCTaGTTCTGGGTCATCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DGKYAFSPSAGKETAASLDFESL*FWVIIQ Trigger: CTGGATGATGACCCAGAACAAGAGACTTTCAAAATC...CAGGGATGCTGCTGTCTCTTTCCCAGCACTGGGACTAAAGGCATACTTACCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| CDS-3UTR CAA 90 bp | AAATGTTTCAAAATGCTTGGTCTCTTGGGACAGCATCCTAGGGAGCTTTTACATCTGTTCGATGATGGCTaGGAAGCTGTAGAGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KCFKMLGLLGQHPRELLHLFDDG*EAVESD Trigger: GTCAGACTCTACAGCTTCCAAGCCATCATCGAACAG...ATGTAAAAGCTCCCTAGGATGCTGTCCCAAGAGACCAAGCATTTTGAAACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| CDS-3UTR CAA 90 bp | TGCTTTATTAAGCAGAGTCTCAATGCAGTCCAGGCTGGCTCTGAACTCATTACATCCTTCAGCATCTATTaGAGTGACAGCTACTACGGA | + |
|
Preference number: 5 (lower is better) Translates to: CFIKQSLNAVQAGSELITSFSIY*SDSYYG Trigger: TCCGTAGTAGCTGTCACTCAAATAGATGCTGAAGGA...TGTAATGAGTTCAGAGCCAGCCTGGACTGCATTGAGACTCTGCTTAATAAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| CDS-3UTR CAA 90 bp | CCTTTGGGAAGCACACGTTGGCTTTGTTGTTGCTACTGCTATTATTCCAGCACTACTAGTGGGATGCTTTaGAGTAAGGTTCCATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLGSTRWLCCCYCYYSSTTSGML*SKVPYS Trigger: TGAATATGGAACCTTACTCAAAAGCATCCCACTAGT...AGTGCTGGAATAATAGCAGTAGCAACAACAAAGCCAACGTGTGCTTCCCAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154704.8 |
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| CDS TCA 90 bp | ACGTTATACATACCACATCCCATGACTCCACTAGTGGGATGCTTTTaGGTAAGGTTCCATATTCATTACAGTGGAAATCCAGGTGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLYIPHPMTPLVGCF*VRFHIHYSGNPGEL Trigger: AAGCTCACCTGGATTTCCACTGTAATGAATATGGAACCTTACTCAAAAGCATCCCACTAGTGGAGTCATGGGATGTGGTATGTATAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102701.5 |
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| CDS-3UTR CAA 90 bp | TGTGACAAGGTAGCATCTGTGACATTCTCAAAAACCTTTTTGTTGATCTCTAGAAGATGGAATGGCCTTTaGAAGACGCAGTTACAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CDKVASVTFSKTFLLISRRWNGL*KTQLQR Trigger: GCGCTGTAACTGCGTCTTCAAAAGGCCATTCCATCT...TCTAGAGATCAACAAAAAGGTTTTTGAGAATGTCACAGATGCTACCTTGTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000136299.2 |
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| CDS GCA 72 bp | GCCCAGGTTCGTCCTCTGCACCACGCCTGCGTCGCGTaGATAGAAGCCCAGAGCCCGGCGACTCAGCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: AQVRPLHHACVA*IEAQSPATQPA Trigger: CGCAGGCTGAGTCGCCGGGCTCTGGGCTTCTATGCACGCGACGCAGGCGTGGTGCAGAGGACGAACCTGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064141.12 ENSMUST00000102701.5 ENSMUST00000112159.9 ENSMUST00000112167.9 ENSMUST00000154704.8 |
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| CDS CAA 72 bp | GCCCTGCAAGGCTCTGGCCACGCGTCCAGAGGGGCGTaGTGGCCAGTGGGACCCTCCAAAGGTACGCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ALQGSGHASRGA*WPVGPSKGTPR Trigger: ACGGGGCGTACCTTTGGAGGGTCCCACTGGCCACAACGCCCCTCTGGACGCGTGGCCAGAGCCTTGCAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS CAA 90 bp | CCTCCTTTGGCCCTGCAAGGCTCTGGCCACGCGTCCAGAGGGGCGTaGTGGCCAGTGGGACCCTCCAAAGGTACGCCCCGTGGCTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPLALQGSGHASRGA*WPVGPSKGTPRGFP Trigger: GGGAAAGCCACGGGGCGTACCTTTGGAGGGTCCCACTGGCCACAACGCCCCTCTGGACGCGTGGCCAGAGCCTTGCAGGGCCAAAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS GCA 72 bp | CCGCAGGATGCCCAGGTTCGTCCTCTGCACCACGCCTaGGTCGCGTGCATAGAAGCCCAGAGCCCGGCGACT | + |
|
Preference number: 6 (lower is better) Translates to: PQDAQVRPLHHA*VACIEAQSPAT Trigger: AGTCGCCGGGCTCTGGGCTTCTATGCACGCGACGCAGGCGTGGTGCAGAGGACGAACCTGGGCATCCTGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064141.12 ENSMUST00000102701.5 ENSMUST00000112159.9 ENSMUST00000112167.9 ENSMUST00000154704.8 |
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| CDS CCA 72 bp | GCTCTGGCCACGCGTCCAGAGGGGCGTTGTGGCCAGTaGGACCCTCCAAAGGTACGCCCCGTGGCTTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALATRPEGRCGQ*DPPKVRPVAFP Trigger: AGGGAAAGCCACGGGGCGTACCTTTGGAGGGTCCCACTGGCCACAACGCCCCTCTGGACGCGTGGCCAGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS GCA 72 bp | TGGTCGTGGGACGACTGCCAACCCCTCCTTTGGCCCTaGAAGGCTCTGGCCACGCGTCCAGAGGGGCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WSWDDCQPLLWP*KALATRPEGRC Trigger: ACAACGCCCCTCTGGACGCGTGGCCAGAGCCTTGCAGGGCCAAAGGAGGGGTTGGCAGTCGTCCCACGACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS GCA 72 bp | GGAAGCAGTCCCTTTCTGCCCTGGTCGTGGGACGACTaGCAACCCCTCCTTTGGCCCTGCAAGGCTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSSPFLPWSWDD*QPLLWPCKALA Trigger: GGCCAGAGCCTTGCAGGGCCAAAGGAGGGGTTGGCAGTCGTCCCACGACCAGGGCAGAAAGGGACTGCTTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS CCA 72 bp | CTCCTGTGTGTCCCAGGAAGCAGTCCCTTTCTGCCCTaGTCGTGGGACGACTGCCAACCCCTCCTTTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LLCVPGSSPFLP*SWDDCQPLLWP Trigger: GGGCCAAAGGAGGGGTTGGCAGTCGTCCCACGACCAGGGCAGAAAGGGACTGCTTCCTGGGACACACAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS CCA 72 bp | TGTGTCCCAGGAAGCAGTCCCTTTCTGCCCTGGTCGTaGGACGACTGCCAACCCCTCCTTTGGCCCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CVPGSSPFLPWS*DDCQPLLWPCK Trigger: CTTGCAGGGCCAAAGGAGGGGTTGGCAGTCGTCCCACGACCAGGGCAGAAAGGGACTGCTTCCTGGGACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS GCA 72 bp | GTACTCTCCTGTGTGTCCCAGGAAGCAGTCCCTTTCTaGCCTGGTCGTGGGACGACTGCCAACCCCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VLSCVSQEAVPF*PGRGTTANPSF Trigger: AAAGGAGGGGTTGGCAGTCGTCCCACGACCAGGGCAGAAAGGGACTGCTTCCTGGGACACACAGGAGAGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130292.8 |
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| CDS TCA 72 bp | ATATACGAAGCAGCCAATTATGAGCAGTCAGGGCTATaGGTGAGGATTTATAGTCTGATGGGTCAGGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: IYEAANYEQSGL*VRIYSLMGQEV Trigger: TACTTCCTGACCCATCAGACTATAAATCCTCACTCATAGCCCTGACTGCTCATAATTGGCTGCTTCGTATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000064141.12 ENSMUST00000102701.5 ENSMUST00000112159.9 ENSMUST00000112167.9 ENSMUST00000130292.8 ENSMUST00000135357.8 ENSMUST00000154704.8 |
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