RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCAF15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037103

Ensembl transcript IDs: ENSMUST00000041367.9, ENSMUST00000210279.2, ENSMUST00000210625.2

Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGGAAGCAGGACTaGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTCCC +
Preference number: 1 (lower is better)
Translates to: YTCSQGQGPERRKQD*ASLGQARAPLSAFP
Trigger: GGGAAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
3UTR GCA 90 bp AGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTaGAACCTAACACTAGTGCCGGTTGTGGCCCTTGTAGGGCCAGCC +
Preference number: 1 (lower is better)
Translates to: RLSGHQRLLCQSHPS*NLTLVPVVALVGPA
Trigger: GGCTGGCCCTACAAGGGCCACAACCGGCACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
3UTR GCA 90 bp ATAAATAAAGACACATCCAGACTCTCGGGCCACCAGAGGCTGCTGTaGCAGTCCCATCCATCCTGCAACCTAACACTAGTGCCGGTTGTG +
Preference number: 1 (lower is better)
Translates to: INKDTSRLSGHQRLL*QSHPSCNLTLVPVV
Trigger: CACAACCGGCACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGATGTGTCTTTATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
3UTR CCA 90 bp AGAGGTGATATATGTAGAAGGAGAAGTCGTCATCCCCACTGCTGCTaGTGTAGGAGAGGACATAGCGGCCACACTTGGAAAATCCCAGGA +
Preference number: 1 (lower is better)
Translates to: RGDICRRRSRHPHCC*CRRGHSGHTWKIPG
Trigger: TCCTGGGATTTTCCAAGTGTGGCCGCTATGTCCTCTCCTACACCAGCAGCAGTGGGGATGACGACTTCTCCTTCTACATATATCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
3UTR GCA 90 bp AGTAGAGGTGATATATGTAGAAGGAGAAGTCGTCATCCCCACTGCTaGTGGTGTAGGAGAGGACATAGCGGCCACACTTGGAAAATCCCA +
Preference number: 1 (lower is better)
Translates to: SRGDICRRRSRHPHC*WCRRGHSGHTWKIP
Trigger: TGGGATTTTCCAAGTGTGGCCGCTATGTCCTCTCCTACACCAGCAGCAGTGGGGATGACGACTTCTCCTTCTACATATATCACCTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
3UTR GCA 90 bp ACCAGTAGAGGTGATATATGTAGAAGGAGAAGTCGTCATCCCCACTaGTGCTGGTGTAGGAGAGGACATAGCGGCCACACTTGGAAAATC +
Preference number: 1 (lower is better)
Translates to: TSRGDICRRRSRHPH*CWCRRGHSGHTWKI
Trigger: GATTTTCCAAGTGTGGCCGCTATGTCCTCTCCTACACCAGCAGCAGTGGGGATGACGACTTCTCCTTCTACATATATCACCTCTACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
3UTR-3UTR CCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTGCCCGTGGAGGTAGTTaGAGTCAGGGTCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: RKQDWASLGQARAPLSAFARGGS*SQGPGQ
Trigger: CTGCCCTGGACCCTGACTCCAACTACCTCCACGGGC...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
3UTR-3UTR CCA 90 bp CAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTGCCCGTGGAGGTAGTTaGAGTCAGGGTCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: QTLGPPEAAVPVPSILQPARGGS*SQGPGQ
Trigger: CTGCCCTGGACCCTGACTCCAACTACCTCCACGGGC...AGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
3UTR-3UTR CCA 90 bp GTTGAACTCCCACCAGTAGAGGTGATATATGTAGAAGGAGAAGTCGTCATCCCCGGGACACGCAGACCCTaGGGGGCAGCTTCCGGAAAA +
Preference number: 2 (lower is better)
Translates to: VELPPVEVIYVEGEVVIPGTRRP*GAASGK
Trigger: TTTTCCGGAAGCTGCCCCCCAGGGTCTGCGTGTCCC...GGGGATGACGACTTCTCCTTCTACATATATCACCTCTACTGGTGGGAGTTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
3UTR CCA 72 bp AGCCAAGGACAAGGGCCAGAGCGCAGGAAGCAGGACTaGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: SQGQGPERRKQD*ASLGQARAPLS
Trigger: AGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGTCCTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
3UTR GCA 72 bp AGGCTGGAACCACTGGCAGCCCTAGAGGGCTACACTTaGAGCCAAGGACAAGGGCCAGAGCGCAGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: RLEPLAALEGYT*SQGQGPERRKQ
Trigger: CTGCTTCCTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGGTTCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
3UTR GCA 72 bp GGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTaGAACCTAACACTAGTGCCGGTTGTGGCCCTTGTA +
Preference number: 3 (lower is better)
Translates to: GHQRLLCQSHPS*NLTLVPVVALV
Trigger: TACAAGGGCCACAACCGGCACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
3UTR GCA 72 bp GACACATCCAGACTCTCGGGCCACCAGAGGCTGCTGTaGCAGTCCCATCCATCCTGCAACCTAACACTAGTG +
Preference number: 3 (lower is better)
Translates to: DTSRLSGHQRLL*QSHPSCNLTLV
Trigger: CACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGATGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
3UTR GCA 72 bp GATATATGTAGAAGGAGAAGTCGTCATCCCCACTGCTaGTGGTGTAGGAGAGGACATAGCGGCCACACTTGG +
Preference number: 3 (lower is better)
Translates to: DICRRRSRHPHC*WCRRGHSGHTW
Trigger: CCAAGTGTGGCCGCTATGTCCTCTCCTACACCAGCAGCAGTGGGGATGACGACTTCTCCTTCTACATATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
3UTR GCA 72 bp GGTGATATATGTAGAAGGAGAAGTCGTCATCCCCACTaGTGCTGGTGTAGGAGAGGACATAGCGGCCACACT +
Preference number: 3 (lower is better)
Translates to: GDICRRRSRHPH*CWCRRGHSGHT
Trigger: AGTGTGGCCGCTATGTCCTCTCCTACACCAGCAGCAGTGGGGATGACGACTTCTCCTTCTACATATATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
3UTR CCA 72 bp TGCTGCTGGTGTAGGAGAGGACATAGCGGCCACACTTaGAAAATCCCAGGAAGATATGGCCTGCATAGAGAA +
Preference number: 3 (lower is better)
Translates to: CCWCRRGHSGHT*KIPGRYGLHRE
Trigger: TTCTCTATGCAGGCCATATCTTCCTGGGATTTTCCAAGTGTGGCCGCTATGTCCTCTCCTACACCAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
3UTR CCA 72 bp ATATGTAGAAGGAGAAGTCGTCATCCCCACTGCTGCTaGTGTAGGAGAGGACATAGCGGCCACACTTGGAAA +
Preference number: 3 (lower is better)
Translates to: ICRRRSRHPHCC*CRRGHSGHTWK
Trigger: TTTCCAAGTGTGGCCGCTATGTCCTCTCCTACACCAGCAGCAGTGGGGATGACGACTTCTCCTTCTACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
3UTR-3UTR CAA 90 bp GTTGAACTCCCACCAGTAGAGGTGATATATGTAGAAGGAGAAGTCGTCATCCCCTCATCTACGATGTTCTaGAGGGACACGCAGACCCTG +
Preference number: 3 (lower is better)
Translates to: VELPPVEVIYVEGEVVIPSSTMF*RDTQTL
Trigger: CAGGGTCTGCGTGTCCCTCAAGAACATCGTAGATGA...GGGGATGACGACTTCTCCTTCTACATATATCACCTCTACTGGTGGGAGTTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
CDS-3UTR CCA 90 bp GGACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCACGACTGGCATCCTaGCAGGCAGCACAACGGCCC +
Preference number: 4 (lower is better)
Translates to: GQGPERRKQDWASLGQARARLAS*QAAQRP
Trigger: GGGCCGTTGTGCTGCCTGCCAGGATGCCAGTCGTGC...CCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GGGCCAGCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGCTTGGGTCCCCTGGGTaGGCACGACTGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GPAQEGGPLRARGGSWSQLGSPG*ARLASW
Trigger: CCAGGATGCCAGTCGTGCCCACCCAGGGGACCCAAG...CTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp ACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCCTTGGCAATGGCTGGTaGGGGCTCAGGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TRARAQEAGLGFAGAGQGLGNGW*GLRGSR
Trigger: TCTGGAGCCCCTGAGCCCTCACCAGCCATTGCCAAG...GCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGATGCCGCAGGCACTGTaGGCTTGGGTCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PRKAVLSGPVEVVGVRVQMPQAL*AWVPWV
Trigger: CACCCAGGGGACCCAAGCGCACAGTGCCTGCGGCAT...CTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCGGGACACGCAGACCCTaGGGGGCAGCTTCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: TRARAQEAGLGFAGAGQGGTRRP*GAASGK
Trigger: TTTTCCGGAAGCTGCCCCCCAGGGTCTGCGTGTCCC...GCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGCTGGGTGGGCACGACTaGCATCCTGGCAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PRKAVLSGPVEVVGVRVQLGGHD*HPGRQH
Trigger: GTGCTGCCTGCCAGGATGCCAGTCGTGCCCACCCAG...CTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCGGGGAAGGCTGGGGCTaGCTCAGGGCTCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLAALEGYTCSQGQGPERGEGWG*LRAPRS
Trigger: GGACCTTGGAGCCCTGAGGCAGCCCCAGCCTTCCCC...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp GTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGCAGTCCAGCCAGGGGCAGTGGTCTCTaGAGCAGGAGGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: VLSGPVEVVGVRVQGSPARGSGL*SRRAVP
Trigger: AGGGACAGCCCTCCTGCTGCAGAGACCACTGCCCCT...GGCTGGACTGCCCTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGACACGCAGACCCTaGGGGGCAGCTTCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: AQEGGPLRARGGSWSQGPGTRRP*GAASGK
Trigger: TTTTCCGGAAGCTGCCCCCCAGGGTCTGCGTGTCCC...TGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCAGGCGGGTTGGAAGGTaGGGAAGGGGTACACCACCT +
Preference number: 4 (lower is better)
Translates to: TRARAQEAGLGFAGAGQGRRVGR*GRGTPP
Trigger: AGGTGGTGTACCCCTTCCCCACCTTCCAACCCGCCT...GCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGAAGACTGGGGAAGGCTaGGGCTGCCTCAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PRKAVLSGPVEVVGVRVQKTGEG*GCLRAP
Trigger: TGGAGCCCTGAGGCAGCCCCAGCCTTCCCCAGTCTT...CTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GGACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGCAGGAGGGCTGTCCCTaGGTACCACTTCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: GQGPERRKQDWASLGQARQEGCP*VPLPHL
Trigger: CAAGTGGGGAAGTGGTACCCAGGGACAGCCCTCCTG...CCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp GGGCCAGCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGGAGTAGCTGGTGTTaGGCAGCACCACCTGATCCT +
Preference number: 4 (lower is better)
Translates to: GPAQEGGPLRARGGSWSQGSSWC*AAPPDP
Trigger: AGGATCAGGTGGTGCTGCTCAACACCAGCTACTCCC...CTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp CAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTCTTGGCAATGGCTGGTaGGGGCTCAGGGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QEAGLGFAGAGQGSSLCLLGNGW*GLRGSR
Trigger: TCTGGAGCCCCTGAGCCCTCACCAGCCATTGCCAAG...AAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp GGGCCAGCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGTGCAGCATGAAGCCATaGCGCAGGCACTGTGCGCTT +
Preference number: 4 (lower is better)
Translates to: GPAQEGGPLRARGGSWSQCSMKP*RRHCAL
Trigger: AAGCGCACAGTGCCTGCGGCATGGCTTCATGCTGCA...CTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGCTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTGGGGAAGGCTGGGGCTaGCTCAGGGCTCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: QTLGPPEAAVPVPSILQPGEGWG*LRAPRS
Trigger: GGACCTTGGAGCCCTGAGGCAGCCCCAGCCTTCCCC...AGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTCTGGGTGGGCACGACTaGCATCCTGGCAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RKQDWASLGQARAPLSAFLGGHD*HPGRQH
Trigger: GTGCTGCCTGCCAGGATGCCAGTCGTGCCCACCCAG...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAAGAACTGGGTGGGGCTaGGGGCAAAGCTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: AQEGGPLRARGGSWSQGPRTGWG*GQSCVV
Trigger: GACCACACAGCTTTGCCCCCAGCCCCACCCAGTTCT...TGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTGGGGCTCCAGAGGGCTaGGCTGGGACCACCTCAACA +
Preference number: 4 (lower is better)
Translates to: RKQDWASLGQARAPLSAFGAPEG*AGTTST
Trigger: TGTTGAGGTGGTCCCAGCCCAGCCCTCTGGAGCCCC...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GGACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTGGCCCTCTTCAGTaGGAGCTGGAAAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GQGPERRKQDWASLGQARAGPLQ*ELERPR
Trigger: TCTTGGCCTTTCCAGCTCCCACTGAAGAGGGCCAGC...CCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GGACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCGGCCACTGCTCTCTaGCACCAGCCATTTCATGAC +
Preference number: 4 (lower is better)
Translates to: GQGPERRKQDWASLGQARAATAL*HQPFHD
Trigger: GTCATGAAATGGCTGGTGCCAGAGAGCAGTGGCCGC...CCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTATGCCGCAGGCACTGTaGGCTTGGGTCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QTLGPPEAAVPVPSILQPMPQAL*AWVPWV
Trigger: CACCCAGGGGACCCAAGCGCACAGTGCCTGCGGCAT...AGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGGCACGACTGGCATCCTaGCAGGCAGCACAACGGCCC +
Preference number: 4 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQARLAS*QAAQRP
Trigger: GGGCCGTTGTGCTGCCTGCCAGGATGCCAGTCGTGC...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTAGAACTGGGTGGGGCTaGGGGCAAAGCTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QEAGLGFAGAGQGSSLCLRTGWG*GQSCVV
Trigger: GACCACACAGCTTTGCCCCCAGCCCCACCCAGTTCT...AAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAGGGGCTCCAGAGGGCTaGGCTGGGACCACCTCAACA +
Preference number: 4 (lower is better)
Translates to: HPDSRATRGCCASPIHPAGAPEG*AGTTST
Trigger: TGTTGAGGTGGTCCCAGCCCAGCCCTCTGGAGCCCC...TGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTCCTTGGCCTTGGCAATaGCTGGTGAGGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RKQDWASLGQARAPLSAFPWPWQ*LVRAQG
Trigger: CCCCTGAGCCCTCACCAGCCATTGCCAAGGCCAAGG...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGCAGTCCAGCCGCTGGCCCTCTTCAGTaGGAGCTGGAAAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: VLSGPVEVVGVRVQGSPAAGPLQ*ELERPR
Trigger: TCTTGGCCTTTCCAGCTCCCACTGAAGAGGGCCAGC...GGCTGGACTGCCCTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp GTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGCAGTCCAGCCGCTTGCTGTGGACGTTaGACTCCCACCAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLSGPVEVVGVRVQGSPAACCGR*TPTSRG
Trigger: ACCTCTACTGGTGGGAGTTCAACGTCCACAGCAAGC...GGCTGGACTGCCCTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp GGGCCAGCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGCACCAGCCATTTCATaGCCATGTCCACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: GPAQEGGPLRARGGSWSQAPAIS*PCPHSS
Trigger: AGAGCTGTGTGGACATGGTCATGAAATGGCTGGTGC...CTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp GTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGCAGTCCAGCCAGACGAGGTGAGAGCTaGCCACTGATCTTGACTCGC +
Preference number: 4 (lower is better)
Translates to: VLSGPVEVVGVRVQGSPARRGES*PLILTR
Trigger: GCGAGTCAAGATCAGTGGGCAGCTCTCACCTCGTCT...GGCTGGACTGCCCTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp GTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGCAGTCCAGCCCGTCATCCCCACTGCTaGTGGTGTAGGAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: VLSGPVEVVGVRVQGSPARHPHC*WCRRGH
Trigger: ATGTCCTCTCCTACACCAGCAGCAGTGGGGATGACG...GGCTGGACTGCCCTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GGGCCAGCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGAGCTTGAGCTTGCTGTaGACGTTGAACTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: GPAQEGGPLRARGGSWSQSLSLL*TLNSHQ
Trigger: CTGGTGGGAGTTCAACGTCCACAGCAAGCTCAAGCT...CTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACCTTGGGTCCCCTGGGTaGGCACGACTGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNLGSPG*ARLASW
Trigger: CCAGGATGCCAGTCGTGCCCACCCAGGGGACCCAAG...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GGACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGGGGGCAAAGCTGTGTaGTCATACAGGATTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGPERRKQDWASLGQARGGKAV*SYRIWQ
Trigger: CTGCCAAATCCTGTATGACCACACAGCTTTGCCCCC...CCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGTCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGAAGACTGGGGAAGGCTaGGGCTGCCTCAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQKTGEG*GCLRAP
Trigger: TGGAGCCCTGAGGCAGCCCCAGCCTTCCCCAGTCTT...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GGACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGCAGCTACAAACTCCTTaGCCTTGGCAATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GQGPERRKQDWASLGQARQLQTP*PWQWLV
Trigger: CACCAGCCATTGCCAAGGCCAAGGAGTTTGTAGCTG...CCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACCAGGCTCAGGGGCAGTaGTCTCTGCAGCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNQAQGQ*SLQQEG
Trigger: GCCCTCCTGCTGCAGAGACCACTGCCCCTGAGCCTG...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp AGGCTGGAACCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCAGGCTCAGGGGCAGTaGTCTCTGCAGCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RLEPLAALEGYTCSQGQGQAQGQ*SLQQEG
Trigger: GCCCTCCTGCTGCAGAGACCACTGCCCCTGAGCCTG...CCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGGTTCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGCTGTCCGCTCTCGCATaGGCCGTAAGTTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQLSALA*AVSCGH
Trigger: GTGGCCGCAACTTACGGCCCATGCGAGAGCGGACAG...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTGCGGCCACTGCTCTCTaGCACCAGCCATTTCATGAC +
Preference number: 4 (lower is better)
Translates to: QEAGLGFAGAGQGSSLCLAATAL*HQPFHD
Trigger: GTCATGAAATGGCTGGTGCCAGAGAGCAGTGGCCGC...AAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTGGGAGTAGCTGGTGTTaGGCAGCACCACCTGATCCT +
Preference number: 4 (lower is better)
Translates to: RKQDWASLGQARAPLSAFGSSWC*AAPPDP
Trigger: AGGATCAGGTGGTGCTGCTCAACACCAGCTACTCCC...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp GCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGCAACTTGGTGTAATTaGTGTAGCCAGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: AQEGGPLRARGGSWSQGPATWCN*CSQAQG
Trigger: CCCCTGAGCCTGGCTACATCAATTACACCAAGTTGC...TGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp GCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGCAGCAGGCCAATGTTaGTCAGGACCTGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: AQEGGPLRARGGSWSQGPAAGQC*SGPGWF
Trigger: AAACCAACCAGGTCCTGATCAACATTGGCCTGCTGC...TGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCGGTCCCAGGCCACCTTaGGACTGGTGTGATAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLAALEGYTCSQGQGPERGPRPP*DWCDRS
Trigger: AGACCTATCACACCAGTCTCAAGGTGGCCTGGGACC...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGACCTGGTATTTGGTGTaGAGCATGAAGCCATGCCGC +
Preference number: 4 (lower is better)
Translates to: PRKAVLSGPVEVVGVRVQTWYLV*SMKPCR
Trigger: GCGGCATGGCTTCATGCTGCACACCAAATACCAGGT...CTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp ATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAAAGGGGCAGTGGTCTCTaGAGCAGGAGGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: IQTLGPPEAAVPVPSILQRGSGL*SRRAVP
Trigger: AGGGACAGCCCTCCTGCTGCAGAGACCACTGCCCCT...TTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGAGGCGGGTTGGAAGGTaGGGAAGGGGTACACCACCT +
Preference number: 4 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQRRVGR*GRGTPP
Trigger: AGGTGGTGTACCCCTTCCCCACCTTCCAACCCGCCT...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGGGGCAAAGCTGTGTaGTCATACAGGATTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRKAVLSGPVEVVGVRVQGGKAV*SYRIWQ
Trigger: CTGCCAAATCCTGTATGACCACACAGCTTTGCCCCC...CTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACCTGTCCGCTCTCGCATaGGCCGTAAGTTGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNLSALA*AVSCGH
Trigger: GTGGCCGCAACTTACGGCCCATGCGAGAGCGGACAG...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTTCCACTGTCAGGTACTaGCCCTGCATGTCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: RKQDWASLGQARAPLSAFSTVRY*PCMSVR
Trigger: GCGGACAGACATGCAGGGCCAGTACCTGACAGTGGA...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GGGCCAGCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGATGTTGATCAGGACCTaGTTGGTTTCTGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: GPAQEGGPLRARGGSWSQMLIRT*LVSGQT
Trigger: GGTCTGCCCAGAAACCAACCAGGTCCTGATCAACAT...CTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCTCACATAGCGGCCACTaGTCTCTGGCACCAGCCATT +
Preference number: 4 (lower is better)
Translates to: PLAALEGYTCSQGQGPERSHSGH*SLAPAI
Trigger: AATGGCTGGTGCCAGAGAGCAGTGGCCGCTATGTGA...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTTCACATAGCGGCCACTaGTCTCTGGCACCAGCCATT +
Preference number: 4 (lower is better)
Translates to: RKQDWASLGQARAPLSAFSHSGH*SLAPAI
Trigger: AATGGCTGGTGCCAGAGAGCAGTGGCCGCTATGTGA...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCCCAGCCATAGCTGGATaGCACTCAGATCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: PLAALEGYTCSQGQGPERPAIAG*HSDPRT
Trigger: TGTCCTGGGATCTGAGTGGCATCCAGCTATGGCTGG...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041367.9
CDS-3UTR CCA 90 bp GCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAAAGGGGTACACCACCTaGTATTTGGTGTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: AQEGGPLRARGGSWSQGPKGYTT*YLVCSM
Trigger: CATGCTGCACACCAAATACCAGGTGGTGTACCCCTT...TGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACACTAGTGCCGGTTGTGGCCCCTTGGCCTTGGCAATaGCTGGTGAGGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLCQSHPSCNLTLVPVVAPWPWQ*LVRAQG
Trigger: CCCCTGAGCCCTCACCAGCCATTGCCAAGGCCAAGG...GGCCACAACCGGCACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp GCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAATGTTGATCAGGACCTaGTTGGTTTCTGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: AQEGGPLRARGGSWSQGPMLIRT*LVSGQT
Trigger: GGTCTGCCCAGAAACCAACCAGGTCCTGATCAACAT...TGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp CATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCACCACCTGATCCTTCTTaGGTTGGAAGGCGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: HPDSRATRGCCASPIHPAPPDPS*VGRRVG
Trigger: TCCAACCCGCCTTCCAACTCAAGAAGGATCAGGTGG...TGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTAAAGAGCAGAACTGGTaGCCCCAAGTGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: RKQDWASLGQARAPLSAFKEQNW*PQVASW
Trigger: CCATGATGCCACTTGGGGTCACCAGTTCTGCTCTTT...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTGCAGCAGGCCAATGTTaGTCAGGACCTGGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RKQDWASLGQARAPLSAFAAGQC*SGPGWF
Trigger: AAACCAACCAGGTCCTGATCAACATTGGCCTGCTGC...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp ATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAAGGTCCCAGGCCACCTTaGGACTGGTGTGATAGGTCT +
Preference number: 4 (lower is better)
Translates to: IQTLGPPEAAVPVPSILQGPRPP*DWCDRS
Trigger: AGACCTATCACACCAGTCTCAAGGTGGCCTGGGACC...TTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAGTCGTCATCCCCACTaGTGCTGGTGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: QTLGPPEAAVPVPSILQPSRHPH*CWCRRG
Trigger: TCCTCTCCTACACCAGCAGCAGTGGGGATGACGACT...AGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp AGGCTGGAACCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGTGCAGCATGAAGCCATaGCGCAGGCACTGTGCGCTT +
Preference number: 4 (lower is better)
Translates to: RLEPLAALEGYTCSQGQGCSMKP*RRHCAL
Trigger: AAGCGCACAGTGCCTGCGGCATGGCTTCATGCTGCA...CCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGGTTCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAAGTCCAGGGTAAGCTaGTCCACTGTCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: PLAALEGYTCSQGQGPERKSRVS*STVRYW
Trigger: CCAGTACCTGACAGTGGAGCAGCTTACCCTGGACTT...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp GTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGCAGTCCAGCCCCTACCTTTGTGCAGTaGCTCGTTTGTCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: VLSGPVEVVGVRVQGSPAPTFVQ*LVCHPV
Trigger: AACAGGATGACAAACGAGGCACTGCACAAAGGTAGG...GGCTGGACTGCCCTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041367.9
CDS-3UTR CCA 90 bp GGGCCAGCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGCATAGCGGCCACACTTaGAAAATCCCAGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: GPAQEGGPLRARGGSWSQHSGHT*KIPGRY
Trigger: ATATCTTCCTGGGATTTTCCAAGTGTGGCCGCTATG...CTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCCAGCTACAAACTCCTTaGCCTTGGCAATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLAALEGYTCSQGQGPERQLQTP*PWQWLV
Trigger: CACCAGCCATTGCCAAGGCCAAGGAGTTTGTAGCTG...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACTCCACTGTCAGGTACTaGCCCTGCATGTCTGTCCGC +
Preference number: 4 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNSTVRY*PCMSVR
Trigger: GCGGACAGACATGCAGGGCCAGTACCTGACAGTGGA...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTCTCTTCAGTGGGAGCTaGAAAGGCCAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTLGPPEAAVPVPSILQPLFSGS*KGQEQQ
Trigger: CTGCTGCTCTTGGCCTTTCCAGCTCCCACTGAAGAG...AGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGCTCTTCAGTGGGAGCTaGAAAGGCCAAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQLFSGS*KGQEQQ
Trigger: CTGCTGCTCTTGGCCTTTCCAGCTCCCACTGAAGAG...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp AGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGGAAGCAGCTTGCTGTGGACGTTaGACTCCCACCAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SPRGLHLQPRTRARAQEAACCGR*TPTSRG
Trigger: ACCTCTACTGGTGGGAGTTCAACGTCCACAGCAAGC...TGCTTCCTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp ATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCACCTGATCCTTCTTaGGTTGGAAGGCGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: IQTLGPPEAAVPVPSILQPPDPS*VGRRVG
Trigger: TCCAACCCGCCTTCCAACTCAAGAAGGATCAGGTGG...TTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGGCAACTTGGTGTAATTaGTGTAGCCAGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQATWCN*CSQAQG
Trigger: CCCCTGAGCCTGGCTACATCAATTACACCAAGTTGC...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp CAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAAAGAGCAGAACTGGTaGCCCCAAGTGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: QTLGPPEAAVPVPSILQPKEQNW*PQVASW
Trigger: CCATGATGCCACTTGGGGTCACCAGTTCTGCTCTTT...AGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp GTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGCAGTCCAGCCCTATGTCATAGTCACTaGAAGAGCAGAACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: VLSGPVEVVGVRVQGSPALCHSH*KSRTGD
Trigger: GTCACCAGTTCTGCTCTTTCAGTGACTATGACATAG...GGCTGGACTGCCCTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp AGGCTGGAACCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGAGACGAGGTGAGAGCTaGCCACTGATCTTGACTCGC +
Preference number: 4 (lower is better)
Translates to: RLEPLAALEGYTCSQGQGRRGES*PLILTR
Trigger: GCGAGTCAAGATCAGTGGGCAGCTCTCACCTCGTCT...CCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGGTTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp AGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGGAAGCACGTCATCCCCACTGCTaGTGGTGTAGGAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: SPRGLHLQPRTRARAQEARHPHC*WCRRGH
Trigger: ATGTCCTCTCCTACACCAGCAGCAGTGGGGATGACG...TGCTTCCTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCGCACCCTTTGTGCAGTaGCTCGTTTGTCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: PLAALEGYTCSQGQGPERAPFVQ*LVCHPV
Trigger: AACAGGATGACAAACGAGGCACTGCACAAAGGGTGC...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGAGCTTGAGCTTGCTGTaGACGTTGAACTCCCACCAG +
Preference number: 4 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQSLSLL*TLNSHQ
Trigger: CTGGTGGGAGTTCAACGTCCACAGCAAGCTCAAGCT...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp AGGCTGGAACCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCAAACTCCTTGGCCTTaGCAATGGCTGGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RLEPLAALEGYTCSQGQGQTPWP*QWLVRA
Trigger: AGCCCTCACCAGCCATTGCCAAGGCCAAGGAGTTTG...CCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGGTTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp CAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTTTGAGCAGCACCACCTaGTCCTTCTTGAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QTLGPPEAAVPVPSILQPLSSTT*SFLSWK
Trigger: CTTCCAACTCAAGAAGGATCAGGTGGTGCTGCTCAA...AGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp AGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGGAAGCAGCACCAGCCATTTCATaGCCATGTCCACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPRGLHLQPRTRARAQEAAPAIS*PCPHSS
Trigger: AGAGCTGTGTGGACATGGTCATGAAATGGCTGGTGC...TGCTTCCTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp AGGCTGGAACCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGAAGTCCAGGGTAAGCTaGTCCACTGTCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: RLEPLAALEGYTCSQGQGKSRVS*STVRYW
Trigger: CCAGTACCTGACAGTGGAGCAGCTTACCCTGGACTT...CCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGGTTCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACACTAGTGCCGGTTGTGGCCCATCCCCACTGCTGCTaGTGTAGGAGAGGACATAGC +
Preference number: 4 (lower is better)
Translates to: LLCQSHPSCNLTLVPVVAHPHCC*CRRGHS
Trigger: GCTATGTCCTCTCCTACACCAGCAGCAGTGGGGATG...GGCCACAACCGGCACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp CTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACACTAGTGCCGGTTGTGGCCCAAACTCCTTGGCCTTaGCAATGGCTGGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLCQSHPSCNLTLVPVVAQTPWP*QWLVRA
Trigger: AGCCCTCACCAGCCATTGCCAAGGCCAAGGAGTTTG...GGCCACAACCGGCACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACGACCTGGTTGGTTTCTaGGCAGACCTCCAAGATGAC +
Preference number: 4 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNDLVGF*ADLQDD
Trigger: GTCATCTTGGAGGTCTGCCCAGAAACCAACCAGGTC...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAAGACCTGGTTGGTTTCTaGGCAGACCTCCAAGATGAC +
Preference number: 4 (lower is better)
Translates to: IQTLGPPEAAVPVPSILQDLVGF*ADLQDD
Trigger: GTCATCTTGGAGGTCTGCCCAGAAACCAACCAGGTC...TTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR GCA 90 bp CTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACACTAGTGCCGGTTGTGGCCACCTGGTATTTGGTGTaGAGCATGAAGCCATGCCGC +
Preference number: 4 (lower is better)
Translates to: LLCQSHPSCNLTLVPVVATWYLV*SMKPCR
Trigger: GCGGCATGGCTTCATGCTGCACACCAAATACCAGGT...GGCCACAACCGGCACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp AGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGGAAGCAAAGGGGTACACCACCTaGTATTTGGTGTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SPRGLHLQPRTRARAQEAKGYTT*YLVCSM
Trigger: CATGCTGCACACCAAATACCAGGTGGTGTACCCCTT...TGCTTCCTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTTGGTCATACAGGATTTaGCAGAAACTGCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: RKQDWASLGQARAPLSAFWSYRI*QKLLSP
Trigger: AGGTGACAGCAGTTTCTGCCAAATCCTGTATGACCA...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGTGGTCATACAGGATTTaGCAGAAACTGCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQWSYRI*QKLLSP
Trigger: AGGTGACAGCAGTTTCTGCCAAATCCTGTATGACCA...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR TCA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACCTATGTCATAGTCACTaGAAGAGCAGAACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNLCHSH*KSRTGD
Trigger: GTCACCAGTTCTGCTCTTTCAGTGACTATGACATAG...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CCA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACCATAGCGGCCACACTTaGAAAATCCCAGGAAGATAT +
Preference number: 4 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNHSGHT*KIPGRY
Trigger: ATATCTTCCTGGGATTTTCCAAGTGTGGCCGCTATG...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCGCAGGCACTGTGCGCTaGGGTCCCCTGGGTGGGCAC +
Preference number: 5 (lower is better)
Translates to: TRARAQEAGLGFAGAGQGAGTVR*GPLGGH
Trigger: GTGCCCACCCAGGGGACCCAAGCGCACAGTGCCTGC...GCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 90 bp AGAGGGCTGGGCTGGGACCACCTCAACACCAAGACTGGGGAAGGCTaGGGCTGCCTCAGGGCTCCAAGGTCCTGGAGAACTGGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: RGLGWDHLNTKTGEG*GCLRAPRSWRTGWG
Trigger: GCCCCACCCAGTTCTCCAGGACCTTGGAGCCCTGAGGCAGCCCCAGCCTTCCCCAGTCTTGGTGTTGAGGTGGTCCCAGCCCAGCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTACTCGCTCCAGCTGCTaGAGAACGTGTTCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: QEAGLGFAGAGQGSSLCLTRSSC*RTCSRR
Trigger: GCGGCGGGAACACGTTCTCAAGCAGCTGGAGCGAGT...AAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp GGGCCAGCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGCGGACCAGCTTGAGCTaGCTGTGGACGTTGAACTCC +
Preference number: 5 (lower is better)
Translates to: GPAQEGGPLRARGGSWSQRTSLS*LWTLNS
Trigger: GGAGTTCAACGTCCACAGCAAGCTCAAGCTGGTCCG...CTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGCTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp GTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGCAGTCCAGCCACCTGCCGGACCAGCTaGAGCTTGCTGTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: VLSGPVEVVGVRVQGSPATCRTS*SLLWTL
Trigger: CAACGTCCACAGCAAGCTCAAGCTGGTCCGGCAGGT...GGCTGGACTGCCCTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp GGGCCAGCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGACAAACTCCTTGGCCTaGGCAATGGCTGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GPAQEGGPLRARGGSWSQTNSLA*AMAGEG
Trigger: GCCCTCACCAGCCATTGCCAAGGCCAAGGAGTTTGT...CTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGCTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 90 bp AAAAGACGAGGTGAGAGCTGCCCACTGATCTTGACTCGCTCCAGCTaGTTGAGAACGTGTTCCCGCCGCCGCCCCACCGCCCGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: KRRGESCPLILTRSS*LRTCSRRRPTARFP
Trigger: GGGGAAGCGGGCGGTGGGGCGGCGGCGGGAACACGTTCTCAAGCAGCTGGAGCGAGTCAAGATCAGTGGGCAGCTCTCACCTCGTCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACACTAGTGCCGGTTGTGGCCGCAGGCACTGTGCGCTaGGGTCCCCTGGGTGGGCAC +
Preference number: 5 (lower is better)
Translates to: LLCQSHPSCNLTLVPVVAAGTVR*GPLGGH
Trigger: GTGCCCACCCAGGGGACCCAAGCGCACAGTGCCTGC...GGCCACAACCGGCACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp GCCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCATTGGCCGAGCGGGTGTaGAAACCAAACACGATGACC +
Preference number: 5 (lower is better)
Translates to: AQEGGPLRARGGSWSQGPLAERV*KPNTMT
Trigger: GGTCATCGTGTTTGGTTTCAACACCCGCTCGGCCAA...TGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CCCAGGAAGGCGGTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGTTGGCCGAGCGGGTGTaGAAACCAAACACGATGACC +
Preference number: 5 (lower is better)
Translates to: PRKAVLSGPVEVVGVRVQLAERV*KPNTMT
Trigger: GGTCATCGTGTTTGGTTTCAACACCCGCTCGGCCAA...CTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGACCGCCTTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGCGCATGGGCCGTAAGTaGCGGCCACGGAGATCAGTC +
Preference number: 5 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQRMGRK*RPRRSV
Trigger: GACTGATCTCCGTGGCCGCAACTTACGGCCCATGCG...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACACTCGCTCCAGCTGCTaGAGAACGTGTTCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNTRSSC*RTCSRR
Trigger: GCGGCGGGAACACGTTCTCAAGCAGCTGGAGCGAGT...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTACCTGCCGGACCAGCTaGAGCTTGCTGTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: QTLGPPEAAVPVPSILQPTCRTS*SLLWTL
Trigger: CAACGTCCACAGCAAGCTCAAGCTGGTCCGGCAGGT...AGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp GTCCTCTCCGGGCCCGTGGAGGTAGTTGGAGTCAGGGTCCAGGGCAGTCCAGCCCTGATCCTTCTTGAGTaGGAAGGCGGGTTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: VLSGPVEVVGVRVQGSPALILLE*EGGLEG
Trigger: ACCTTCCAACCCGCCTTCCAACTCAAGAAGGATCAG...GGCTGGACTGCCCTGGACCCTGACTCCAACTACCTCCACGGGCCCGGAGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCACAAACTCCTTGGCCTaGGCAATGGCTGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: PLAALEGYTCSQGQGPERTNSLA*AMAGEG
Trigger: GCCCTCACCAGCCATTGCCAAGGCCAAGGAGTTTGT...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp AGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGGAAGCACGCATGGGCCGTAAGTaGCGGCCACGGAGATCAGTC +
Preference number: 5 (lower is better)
Translates to: SPRGLHLQPRTRARAQEARMGRK*RPRRSV
Trigger: GACTGATCTCCGTGGCCGCAACTTACGGCCCATGCG...TGCTTCCTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 90 bp GTGGGCACGACTGGCATCCTGGCAGGCAGCACAACGGCCCCGAGGTaGCACAGCCACAGTGCTGATGTAGATGTCACGATGGTTCTCATC +
Preference number: 5 (lower is better)
Translates to: VGTTGILAGSTTAPR*HSHSADVDVTMVLI
Trigger: GATGAGAACCATCGTGACATCTACATCAGCACTGTGGCTGTGCCACCTCGGGGCCGTTGTGCTGCCTGCCAGGATGCCAGTCGTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTCAGCTACAAACTCCTaGGCCTTGGCAATGGCTGGT +
Preference number: 5 (lower is better)
Translates to: QEAGLGFAGAGQGSSLCLSATNS*ALAMAG
Trigger: ACCAGCCATTGCCAAGGCCAAGGAGTTTGTAGCTGA...AAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp GGACAAGGGCCAGAGCGCAGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGAAAGGCAGGGAGATCTaGTCATCCTCAAACTCATCC +
Preference number: 5 (lower is better)
Translates to: GQGPERRKQDWASLGQARKGREI*SSSNSS
Trigger: GGATGAGTTTGAGGATGACAAGATCTCCCTGCCTTT...CCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCTGCGCTCTGGCCCTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTTCAAAGATGCCTGTGTaGAGGTCCCAGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: RKQDWASLGQARAPLSAFSKMPV*RSQATL
Trigger: CAAGGTGGCCTGGGACCTCAACACAGGCATCTTTGA...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCCTGATCCTTCTTGAGTaGGAAGGCGGGTTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: PLAALEGYTCSQGQGPERLILLE*EGGLEG
Trigger: ACCTTCCAACCCGCCTTCCAACTCAAGAAGGATCAG...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp AGGAAGCAGGACTGGGCTTCGCTGGGGCAGGCCAGGGCTCCTCTCTCTGCCTTTTCAGCTACAAACTCCTaGGCCTTGGCAATGGCTGGT +
Preference number: 5 (lower is better)
Translates to: RKQDWASLGQARAPLSAFSATNS*ALAMAG
Trigger: ACCAGCCATTGCCAAGGCCAAGGAGTTTGTAGCTGA...AAAGGCAGAGAGAGGAGCCCTGGCCTGCCCCAGCGAAGCCCAGTCCTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCATTGATCAGGACCTGGTaGGTTTCTGGGCAGACCTCC +
Preference number: 5 (lower is better)
Translates to: HPDSRATRGCCASPIHPALIRTW*VSGQTS
Trigger: GGAGGTCTGCCCAGAAACCAACCAGGTCCTGATCAA...TGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 90 bp GGTACTGGCCCTGCATGTCTGTCCGCTCTCGCATGGGCCGTAAGTTaGGGCCACGGAGATCAGTCACCACAAAAGGCAGGGAGATCTTGT +
Preference number: 5 (lower is better)
Translates to: GTGPACLSALAWAVS*GHGDQSPQKAGRSC
Trigger: ACAAGATCTCCCTGCCTTTTGTGGTGACTGATCTCCGTGGCCGCAACTTACGGCCCATGCGAGAGCGGACAGACATGCAGGGCCAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCGTGGTCATACAGGATTaGGCAGAAACTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: PLAALEGYTCSQGQGPERVVIQD*AETAVT
Trigger: GGTGACAGCAGTTTCTGCCAAATCCTGTATGACCAC...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAATTGATCAGGACCTGGTaGGTTTCTGGGCAGACCTCC +
Preference number: 5 (lower is better)
Translates to: IQTLGPPEAAVPVPSILQLIRTW*VSGQTS
Trigger: GGAGGTCTGCCCAGAAACCAACCAGGTCCTGATCAA...TTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAATCAAAGATGCCTGTGTaGAGGTCCCAGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: IQTLGPPEAAVPVPSILQSKMPV*RSQATL
Trigger: CAAGGTGGCCTGGGACCTCAACACAGGCATCTTTGA...TTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCTGTGCAGTGCCTCGTTaGTCATCCTGTTCACATAGC +
Preference number: 5 (lower is better)
Translates to: PLAALEGYTCSQGQGPERCAVPR*SSCSHS
Trigger: GCTATGTGAACAGGATGACAAACGAGGCACTGCACA...GCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACTCATCTACGATGTTCTaGAGGGACACGCAGACCCTG +
Preference number: 5 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNSSTMF*RDTQTL
Trigger: CAGGGTCTGCGTGTCCCTCAAGAACATCGTAGATGA...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGGTGGTCATACAGGATTaGGCAGAAACTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQVVIQD*AETAVT
Trigger: GGTGACAGCAGTTTCTGCCAAATCCTGTATGACCAC...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGCCAGAGCGCAGTGTGCAGTGCCTCGTTaGTCATCCTGTTCACATAGC +
Preference number: 5 (lower is better)
Translates to: TGSPRGLHLQPRTRARAQCAVPR*SSCSHS
Trigger: GCTATGTGAACAGGATGACAAACGAGGCACTGCACA...CTGCGCTCTGGCCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS TCA 90 bp CCTGGCAGGCAGCACAACGGCCCCGAGGTGGCACAGCCACAGTGCTaGTGTAGATGTCACGATGGTTCTCATCGCTCATCATCATCATGT +
Preference number: 5 (lower is better)
Translates to: PGRQHNGPEVAQPQC*CRCHDGSHRSSSSC
Trigger: ACATGATGATGATGAGCGATGAGAACCATCGTGACATCTACATCAGCACTGTGGCTGTGCCACCTCGGGGCCGTTGTGCTGCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS TCA 90 bp CTGTCCCTTCCCCAGACTGCAACACATAGTGCAACTTGGTGTAATTaGTGTAGCCAGGCTCAGGGGCAGTGGTCTCTGCAGCAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LSLPQTATHSATWCN*CSQAQGQWSLQQEG
Trigger: GCCCTCCTGCTGCAGAGACCACTGCCCCTGAGCCTGGCTACATCAATTACACCAAGTTGCACTATGTGTTGCAGTCTGGGGAAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 90 bp TGGCGGATGACCTCATTGATGACATACTCGAAGTCCAGGGTAAGCTaGTCCACTGTCAGGTACTGGCCCTGCATGTCTGTCCGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: WRMTSLMTYSKSRVS*STVRYWPCMSVRSR
Trigger: GCGAGAGCGGACAGACATGCAGGGCCAGTACCTGACAGTGGAGCAGCTTACCCTGGACTTCGAGTATGTCATCAATGAGGTCATCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 90 bp GATCAGGTGTCCTGCCCAGCTAGGGCACTTCCTACCTTTGTGCAGTaGCTCGTTTGTCATCCTGTTCACATAGCGGCCACTGCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: DQVSCPARALPTFVQ*LVCHPVHIAATALW
Trigger: CCAGAGAGCAGTGGCCGCTATGTGAACAGGATGACAAACGAGGCACTGCACAAAGGTAGGAAGTGCCCTAGCTGGGCAGGACACCTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041367.9
CDS-3UTR CAA 90 bp AGGCTGGAACCACTGGCAGCCCTAGAGGGCTACACTTGCAGCCAAGGACAAGGGTACACCACCTGGTATTaGGTGTGCAGCATGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RLEPLAALEGYTCSQGQGYTTWY*VCSMKP
Trigger: TGGCTTCATGCTGCACACCAAATACCAGGTGGTGTA...CCCTTGTCCTTGGCTGCAAGTGTAGCCCTCTAGGGCTGCCAGTGGTTCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACTGGCGGATGACCTCATaGATGACATACTCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNWRMTS*MTYSKS
Trigger: GGACTTCGAGTATGTCATCAATGAGGTCATCCGCCA...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ATCCAGACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAATGGCGGATGACCTCATaGATGACATACTCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: IQTLGPPEAAVPVPSILQWRMTS*MTYSKS
Trigger: GGACTTCGAGTATGTCATCAATGAGGTCATCCGCCA...TTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGTCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS TCA 90 bp TCCTGTTCACATAGCGGCCACTGCTCTCTGGCACCAGCCATTTCATaGCCATGTCCACACAGCTCTTTCGGTAGGAGCTCCAGACACTGC +
Preference number: 5 (lower is better)
Translates to: SCSHSGHCSLAPAIS*PCPHSSFGRSSRHC
Trigger: GCAGTGTCTGGAGCTCCTACCGAAAGAGCTGTGTGGACATGGTCATGAAATGGCTGGTGCCAGAGAGCAGTGGCCGCTATGTGAACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACACTAGTGCCGGTTGTGGCCTACACCACCTGGTATTaGGTGTGCAGCATGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LLCQSHPSCNLTLVPVVAYTTWY*VCSMKP
Trigger: TGGCTTCATGCTGCACACCAAATACCAGGTGGTGTA...GGCCACAACCGGCACTAGTGTTAGGTTGCAGGATGGATGGGACTGGCACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp ACTCTCGGGCCACCAGAGGCTGCTGTGCCAGTCCCATCCATCCTGCAACCTAACAAAGGCAGGGAGATCTaGTCATCCTCAAACTCATCC +
Preference number: 5 (lower is better)
Translates to: TLGPPEAAVPVPSILQPNKGREI*SSSNSS
Trigger: GGATGAGTTTGAGGATGACAAGATCTCCCTGCCTTT...GTTAGGTTGCAGGATGGATGGGACTGGCACAGCAGCCTCTGGTGGCCCGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 90 bp CAGTGCCTCGTTTGTCATCCTGTTCACATAGCGGCCACTGCTCTCTaGCACCAGCCATTTCATGACCATGTCCACACAGCTCTTTCGGTA +
Preference number: 5 (lower is better)
Translates to: QCLVCHPVHIAATAL*HQPFHDHVHTALSV
Trigger: TACCGAAAGAGCTGTGTGGACATGGTCATGAAATGGCTGGTGCCAGAGAGCAGTGGCCGCTATGTGAACAGGATGACAAACGAGGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS-3UTR CAA 90 bp CACACTTGGAAAATCCCAGGAAGATATGGCCTGCATAGAGAAAATCCTCATCTAACTCGCTCCAGCTGCTaGAGAACGTGTTCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: HTWKIPGRYGLHRENPHLTRSSC*RTCSRR
Trigger: GCGGCGGGAACACGTTCTCAAGCAGCTGGAGCGAGT...TAGATGAGGATTTTCTCTATGCAGGCCATATCTTCCTGGGATTTTCCAAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210625.2
CDS CCA 72 bp GCGCTTGGGTCCCCTGGGTGGGCACGACTGGCATCCTaGCAGGCAGCACAACGGCCCCGAGGTGGCACAGCC +
Preference number: 6 (lower is better)
Translates to: ALGSPGWARLAS*QAAQRPRGGTA
Trigger: GGCTGTGCCACCTCGGGGCCGTTGTGCTGCCTGCCAGGATGCCAGTCGTGCCCACCCAGGGGACCCAAGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 72 bp GAGAGCTGCCCACTGATCTTGACTCGCTCCAGCTGCTaGAGAACGTGTTCCCGCCGCCGCCCCACCGCCCGC +
Preference number: 6 (lower is better)
Translates to: ESCPLILTRSSC*RTCSRRRPTAR
Trigger: GCGGGCGGTGGGGCGGCGGCGGGAACACGTTCTCAAGCAGCTGGAGCGAGTCAAGATCAGTGGGCAGCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 72 bp CAGAGGGCTGGGCTGGGACCACCTCAACACCAAGACTaGGGAAGGCTGGGGCTGCCTCAGGGCTCCAAGGTC +
Preference number: 6 (lower is better)
Translates to: QRAGLGPPQHQD*GRLGLPQGSKV
Trigger: GACCTTGGAGCCCTGAGGCAGCCCCAGCCTTCCCCAGTCTTGGTGTTGAGGTGGTCCCAGCCCAGCCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 72 bp CAGCAGGAGGGCTGTCCCTGGGTACCACTTCCCCACTaGGGGCTTGCGGCTCTAAAGATGGGCGGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: QQEGCPWVPLPH*GLAALKMGGSG
Trigger: GCCGCTGCCGCCCATCTTTAGAGCCGCAAGCCCCAAGTGGGGAAGTGGTACCCAGGGACAGCCCTCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 72 bp GGGCTGTCCCTGGGTACCACTTCCCCACTTGGGGCTTaGGGCTCTAAAGATGGGCGGCAGCGGCTGCTTGAG +
Preference number: 6 (lower is better)
Translates to: GLSLGTTSPLGA*GSKDGRQRLLE
Trigger: CTCAAGCAGCCGCTGCCGCCCATCTTTAGAGCCGCAAGCCCCAAGTGGGGAAGTGGTACCCAGGGACAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 90 bp TGGTCTCTGCAGCAGGAGGGCTGTCCCTGGGTACCACTTCCCCACTaGGGGCTTGCGGCTCTAAAGATGGGCGGCAGCGGCTGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: WSLQQEGCPWVPLPH*GLAALKMGGSGCLR
Trigger: CCTCAAGCAGCCGCTGCCGCCCATCTTTAGAGCCGCAAGCCCCAAGTGGGGAAGTGGTACCCAGGGACAGCCCTCCTGCTGCAGAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 72 bp TTTGGTGTGCAGCATGAAGCCATGCCGCAGGCACTGTaGGCTTGGGTCCCCTGGGTGGGCACGACTGGCATC +
Preference number: 6 (lower is better)
Translates to: FGVQHEAMPQAL*AWVPWVGTTGI
Trigger: GATGCCAGTCGTGCCCACCCAGGGGACCCAAGCGCACAGTGCCTGCGGCATGGCTTCATGCTGCACACCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS TCA 72 bp GGAAGGGGTACACCACCTGGTATTTGGTGTGCAGCATaGAGCCATGCCGCAGGCACTGTGCGCTTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: GRGTPPGIWCAA*SHAAGTVRLGP
Trigger: GGGACCCAAGCGCACAGTGCCTGCGGCATGGCTTCATGCTGCACACCAAATACCAGGTGGTGTACCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 72 bp CCTGCATGTCTGTCCGCTCTCGCATGGGCCGTAAGTTaGGGCCACGGAGATCAGTCACCACAAAAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PACLSALAWAVS*GHGDQSPQKAG
Trigger: CCCTGCCTTTTGTGGTGACTGATCTCCGTGGCCGCAACTTACGGCCCATGCGAGAGCGGACAGACATGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 72 bp ACTGGCATCCTGGCAGGCAGCACAACGGCCCCGAGGTaGCACAGCCACAGTGCTGATGTAGATGTCACGATG +
Preference number: 6 (lower is better)
Translates to: TGILAGSTTAPR*HSHSADVDVTM
Trigger: CATCGTGACATCTACATCAGCACTGTGGCTGTGCCACCTCGGGGCCGTTGTGCTGCCTGCCAGGATGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 72 bp CCCTGCGGAAGATGTCAGCTACAAACTCCTTGGCCTTaGCAATGGCTGGTGAGGGCTCAGGGGCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: PCGRCQLQTPWP*QWLVRAQGLQR
Trigger: CCTCTGGAGCCCCTGAGCCCTCACCAGCCATTGCCAAGGCCAAGGAGTTTGTAGCTGACATCTTCCGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 72 bp TCAGGTACTGGCCCTGCATGTCTGTCCGCTCTCGCATaGGCCGTAAGTTGCGGCCACGGAGATCAGTCACCA +
Preference number: 6 (lower is better)
Translates to: SGTGPACLSALA*AVSCGHGDQSP
Trigger: TGGTGACTGATCTCCGTGGCCGCAACTTACGGCCCATGCGAGAGCGGACAGACATGCAGGGCCAGTACCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 72 bp GCCCTGCGGAAGATGTCAGCTACAAACTCCTTGGCCTaGGCAATGGCTGGTGAGGGCTCAGGGGCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: ALRKMSATNSLA*AMAGEGSGAPE
Trigger: CTCTGGAGCCCCTGAGCCCTCACCAGCCATTGCCAAGGCCAAGGAGTTTGTAGCTGACATCTTCCGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 72 bp CCCTGCATGTCTGTCCGCTCTCGCATGGGCCGTAAGTaGCGGCCACGGAGATCAGTCACCACAAAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: PCMSVRSRMGRK*RPRRSVTTKGR
Trigger: CCTGCCTTTTGTGGTGACTGATCTCCGTGGCCGCAACTTACGGCCCATGCGAGAGCGGACAGACATGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 72 bp AAGGCGGGTTGGAAGGTGGGGAAGGGGTACACCACCTaGTATTTGGTGTGCAGCATGAAGCCATGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: KAGWKVGKGYTT*YLVCSMKPCRR
Trigger: CCTGCGGCATGGCTTCATGCTGCACACCAAATACCAGGTGGTGTACCCCTTCCCCACCTTCCAACCCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 72 bp CTCAGGGCTCCAAGGTCCTGGAGAACTGGGTGGGGCTaGGGGCAAAGCTGTGTGGTCATACAGGATTTGGCA +
Preference number: 6 (lower is better)
Translates to: LRAPRSWRTGWG*GQSCVVIQDLA
Trigger: TGCCAAATCCTGTATGACCACACAGCTTTGCCCCCAGCCCCACCCAGTTCTCCAGGACCTTGGAGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 90 bp AGGTACTGGCCCTGCATGTCTGTCCGCTCTCGCATGGGCCGTAAGTaGCGGCCACGGAGATCAGTCACCACAAAAGGCAGGGAGATCTTG +
Preference number: 6 (lower is better)
Translates to: RYWPCMSVRSRMGRK*RPRRSVTTKGREIL
Trigger: CAAGATCTCCCTGCCTTTTGTGGTGACTGATCTCCGTGGCCGCAACTTACGGCCCATGCGAGAGCGGACAGACATGCAGGGCCAGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 90 bp GGCCCCAAGCTAGAGGGCAGCCGAGTTTCCTCCAAGGGACTACCCTaGGCCTCTTTAGCCCTGCGGAAGATGTCAGCTACAAACTCCTTG +
Preference number: 6 (lower is better)
Translates to: GPKLEGSRVSSKGLP*ASLALRKMSATNSL
Trigger: CAAGGAGTTTGTAGCTGACATCTTCCGCAGGGCTAAAGAGGCCAAGGGTAGTCCCTTGGAGGAAACTCGGCTGCCCTCTAGCTTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS TCA 72 bp CCAAGTGTACCGCTCACTGTCTGCCAGAACCTTCAGTaGGCACCCCGCTTCTCCAGCCATAGCTGGATGCCA +
Preference number: 6 (lower is better)
Translates to: PSVPLTVCQNLQ*APRFSSHSWMP
Trigger: TGGCATCCAGCTATGGCTGGAGAAGCGGGGTGCTCACTGAAGGTTCTGGCAGACAGTGAGCGGTACACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041367.9
CDS GCA 72 bp AAGGTGGGGAAGGGGTACACCACCTGGTATTTGGTGTaGAGCATGAAGCCATGCCGCAGGCACTGTGCGCTT +
Preference number: 6 (lower is better)
Translates to: KVGKGYTTWYLV*SMKPCRRHCAL
Trigger: AAGCGCACAGTGCCTGCGGCATGGCTTCATGCTGCACACCAAATACCAGGTGGTGTACCCCTTCCCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 72 bp TTCAGTGAGCACCCCGCTTCTCCAGCCATAGCTGGATaGCACTCAGATCCCAGGACACTCCTTACGTCCAGC +
Preference number: 6 (lower is better)
Translates to: FSEHPASPAIAG*HSDPRTLLTSS
Trigger: GCTGGACGTAAGGAGTGTCCTGGGATCTGAGTGGCATCCAGCTATGGCTGGAGAAGCGGGGTGCTCACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041367.9
CDS CAA 72 bp GGTTGGAAGGTGGGGAAGGGGTACACCACCTGGTATTaGGTGTGCAGCATGAAGCCATGCCGCAGGCACTGT +
Preference number: 6 (lower is better)
Translates to: GWKVGKGYTTWY*VCSMKPCRRHC
Trigger: ACAGTGCCTGCGGCATGGCTTCATGCTGCACACCAAATACCAGGTGGTGTACCCCTTCCCCACCTTCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 90 bp AGCATCCCGTTGGCCGAGCGGGTGTTGAAACCAAACACGATGACCTaGGAAGCGTCGCTAGGCCACTCACACACAGTCAGGTACAGGTCA +
Preference number: 6 (lower is better)
Translates to: SIPLAERVLKPNTMT*EASLGHSHTVRYRS
Trigger: TGACCTGTACCTGACTGTGTGTGAGTGGCCTAGCGACGCTTCCAAGGTCATCGTGTTTGGTTTCAACACCCGCTCGGCCAACGGGATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 90 bp GGTGTTGAGCAGCACCACCTGATCCTTCTTGAGTTGGAAGGCGGGTaGGAAGGTGGGGAAGGGGTACACCACCTGGTATTTGGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: GVEQHHLILLELEGG*EGGEGVHHLVFGVQ
Trigger: CTGCACACCAAATACCAGGTGGTGTACCCCTTCCCCACCTTCCAACCCGCCTTCCAACTCAAGAAGGATCAGGTGGTGCTGCTCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS TCA 72 bp CAGCACAACGGCCCCGAGGTGGCACAGCCACAGTGCTaGTGTAGATGTCACGATGGTTCTCATCGCTCATCA +
Preference number: 6 (lower is better)
Translates to: QHNGPEVAQPQC*CRCHDGSHRSS
Trigger: TGATGAGCGATGAGAACCATCGTGACATCTACATCAGCACTGTGGCTGTGCCACCTCGGGGCCGTTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS TCA 72 bp TGGGAGCTGGAAAGGCCAAGAGCAGCAGGCCAATGTTaGTCAGGACCTGGTTGGTTTCTGGGCAGACCTCCA +
Preference number: 6 (lower is better)
Translates to: WELERPRAAGQC*SGPGWFLGRPP
Trigger: TGGAGGTCTGCCCAGAAACCAACCAGGTCCTGATCAACATTGGCCTGCTGCTCTTGGCCTTTCCAGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS TCA 72 bp CATAGCGGCCACTGCTCTCTGGCACCAGCCATTTCATaGCCATGTCCACACAGCTCTTTCGGTAGGAGCTCC +
Preference number: 6 (lower is better)
Translates to: HSGHCSLAPAIS*PCPHSSFGRSS
Trigger: GGAGCTCCTACCGAAAGAGCTGTGTGGACATGGTCATGAAATGGCTGGTGCCAGAGAGCAGTGGCCGCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 72 bp GGGGCTGGGGGCAAAGCTGTGTGGTCATACAGGATTTaGCAGAAACTGCTGTCACCTGCTGAGTGGACAGAG +
Preference number: 6 (lower is better)
Translates to: GAGGKAVWSYRI*QKLLSPAEWTE
Trigger: CTCTGTCCACTCAGCAGGTGACAGCAGTTTCTGCCAAATCCTGTATGACCACACAGCTTTGCCCCCAGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 72 bp CTAGAGGGCAGCCGAGTTTCCTCCAAGGGACTACCCTaGGCCTCTTTAGCCCTGCGGAAGATGTCAGCTACA +
Preference number: 6 (lower is better)
Translates to: LEGSRVSSKGLP*ASLALRKMSAT
Trigger: TGTAGCTGACATCTTCCGCAGGGCTAAAGAGGCCAAGGGTAGTCCCTTGGAGGAAACTCGGCTGCCCTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 72 bp TCCTGCCCAGCTAGGGCACTTCCTACCTTTGTGCAGTaGCTCGTTTGTCATCCTGTTCACATAGCGGCCACT +
Preference number: 6 (lower is better)
Translates to: SCPARALPTFVQ*LVCHPVHIAAT
Trigger: AGTGGCCGCTATGTGAACAGGATGACAAACGAGGCACTGCACAAAGGTAGGAAGTGCCCTAGCTGGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041367.9
CDS CAA 72 bp CAGCACCACCTGATCCTTCTTGAGTTGGAAGGCGGGTaGGAAGGTGGGGAAGGGGTACACCACCTGGTATTT +
Preference number: 6 (lower is better)
Translates to: QHHLILLELEGG*EGGEGVHHLVF
Trigger: AAATACCAGGTGGTGTACCCCTTCCCCACCTTCCAACCCGCCTTCCAACTCAAGAAGGATCAGGTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 90 bp AAGTTGCGGCCACGGAGATCAGTCACCACAAAAGGCAGGGAGATCTaGTCATCCTCAAACTCATCCTCAGGCTCTGTCCCTTCCCCAGAC +
Preference number: 6 (lower is better)
Translates to: KLRPRRSVTTKGREI*SSSNSSSGSVPSPD
Trigger: GTCTGGGGAAGGGACAGAGCCTGAGGATGAGTTTGAGGATGACAAGATCTCCCTGCCTTTTGTGGTGACTGATCTCCGTGGCCGCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS TCA 72 bp CCCCAGACTGCAACACATAGTGCAACTTGGTGTAATTaGTGTAGCCAGGCTCAGGGGCAGTGGTCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: PQTATHSATWCN*CSQAQGQWSLQ
Trigger: CTGCAGAGACCACTGCCCCTGAGCCTGGCTACATCAATTACACCAAGTTGCACTATGTGTTGCAGTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 72 bp GAACCTTCAGTGAGCACCCTTTGTGCAGTGCCTCGTTaGTCATCCTGTTCACATAGCGGCCACTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: EPSVSTLCAVPR*SSCSHSGHCSL
Trigger: CAGAGAGCAGTGGCCGCTATGTGAACAGGATGACAAACGAGGCACTGCACAAAGGGTGCTCACTGAAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210279.2
CDS CAA 90 bp CTCATCATCATCATGTTCATGAGCATCCCGTTGGCCGAGCGGGTGTaGAAACCAAACACGATGACCTTGGAAGCGTCGCTAGGCCACTCA +
Preference number: 6 (lower is better)
Translates to: LIIIMFMSIPLAERV*KPNTMTLEASLGHS
Trigger: TGAGTGGCCTAGCGACGCTTCCAAGGTCATCGTGTTTGGTTTCAACACCCGCTCGGCCAACGGGATGCTCATGAACATGATGATGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS GCA 72 bp ACCTCATTGATGACATACTCGAAGTCCAGGGTAAGCTaGTCCACTGTCAGGTACTGGCCCTGCATGTCTGTC +
Preference number: 6 (lower is better)
Translates to: TSLMTYSKSRVS*STVRYWPCMSV
Trigger: GACAGACATGCAGGGCCAGTACCTGACAGTGGAGCAGCTTACCCTGGACTTCGAGTATGTCATCAATGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 72 bp AAGGCCAAGAGCAGCAGGCCAATGTTGATCAGGACCTaGTTGGTTTCTGGGCAGACCTCCAAGATGACTATG +
Preference number: 6 (lower is better)
Translates to: KAKSSRPMLIRT*LVSGQTSKMTM
Trigger: CATAGTCATCTTGGAGGTCTGCCCAGAAACCAACCAGGTCCTGATCAACATTGGCCTGCTGCTCTTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CCA 72 bp GTTTGTCATCCTGTTCACATAGCGGCCACTGCTCTCTaGCACCAGCCATTTCATGACCATGTCCACACAGCT +
Preference number: 6 (lower is better)
Translates to: VCHPVHIAATAL*HQPFHDHVHTA
Trigger: AGCTGTGTGGACATGGTCATGAAATGGCTGGTGCCAGAGAGCAGTGGCCGCTATGTGAACAGGATGACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 72 bp ATCATGTTCATGAGCATCCCGTTGGCCGAGCGGGTGTaGAAACCAAACACGATGACCTTGGAAGCGTCGCTA +
Preference number: 6 (lower is better)
Translates to: IMFMSIPLAERV*KPNTMTLEASL
Trigger: TAGCGACGCTTCCAAGGTCATCGTGTTTGGTTTCAACACCCGCTCGGCCAACGGGATGCTCATGAACATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2
CDS CAA 72 bp GCCAAGAGCAGCAGGCCAATGTTGATCAGGACCTGGTaGGTTTCTGGGCAGACCTCCAAGATGACTATGTCA +
Preference number: 6 (lower is better)
Translates to: AKSSRPMLIRTW*VSGQTSKMTMS
Trigger: TGACATAGTCATCTTGGAGGTCTGCCCAGAAACCAACCAGGTCCTGATCAACATTGGCCTGCTGCTCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000041367.9
ENSMUST00000210279.2