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Pregenerated sensors for DCAF12L2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050926

Ensembl transcript IDs: ENSMUST00000115057.2

Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATAACTATATATGTACCCAATACAAGTATCAACTGCACTCACTCTaGCCATTGCAAATGGCTAATTGGACTGTGTTTCTTGAATGTTCA +
Preference number: 1 (lower is better)
Translates to: NNYICTQYKYQLHSL*PLQMANWTVFLECS
Trigger: TGAACATTCAAGAAACACAGTCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGGTACATATATAGTTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
3UTR-3UTR TCA 90 bp TTATTGCTAAGAGGATATAGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTCCTTCTGTGATTaGGCACTAGAAAGTTGGGTC +
Preference number: 2 (lower is better)
Translates to: LLLRGYRNLSLSLSLSLSVSFCD*ALESWV
Trigger: GACCCAACTTTCTAGTGCTCAATCACAGAAGGAAAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTATATCCTCTTAGCAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
3UTR-3UTR GCA 90 bp TGCACTCACTCTGACCATTGCAAATGGCTAATTGGACTGTGTTTCTTGAATGTTTGCTCTGAGAGAAAGTaGCCAAGTCAAAGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: CTHSDHCKWLIGLCFLNVCSERK*PSQSKF
Trigger: AAACTTGCTTTGACTTGGGCACTTTCTCTCAGAGCA...AACATTCAAGAAACACAGTCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
3UTR-3UTR TCA 90 bp TTATTGCTAAGAGGATATAGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCGTTTCCTTCTGTaGTTGAGCACTAGAAAGTTG +
Preference number: 2 (lower is better)
Translates to: LLLRGYRNLSLSLSLSLSFRFLL*LSTRKL
Trigger: CAACTTTCTAGTGCTCAATCACAGAAGGAAACGAAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTATATCCTCTTAGCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
3UTR-3UTR CAA 90 bp CCCAATACAAGTATCAACTGCACTCACTCTGACCATTGCAAATGGCTAATTGGATGGGTCAACTCCACTTaGAAAATAAATCACTCACAC +
Preference number: 3 (lower is better)
Translates to: PNTSINCTHSDHCKWLIGWVNST*KINHSH
Trigger: GTGTGAGTGATTTATTTTCAAAGTGGAGTTGACCCA...TCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
3UTR CCA 72 bp ACAAGTATCAACTGCACTCACTCTGACCATTGCAAATaGCTAATTGGACTGTGTTTCTTGAATGTTCAGGAA +
Preference number: 3 (lower is better)
Translates to: TSINCTHSDHCK*LIGLCFLNVQE
Trigger: TTCCTGAACATTCAAGAAACACAGTCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
3UTR TCA 72 bp ATATGTACCCAATACAAGTATCAACTGCACTCACTCTaGCCATTGCAAATGGCTAATTGGACTGTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: ICTQYKYQLHSL*PLQMANWTVFL
Trigger: AAGAAACACAGTCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGGTACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
3UTR TCA 72 bp ACCATTTTATACTCCCACAATGTTCAAATCCACTACTaGGTTTTCCTACATTCAAATGAAAGACACTCCAAA +
Preference number: 3 (lower is better)
Translates to: TILYSHNVQIHY*VFLHSNERHSK
Trigger: TTTGGAGTGTCTTTCATTTGAATGTAGGAAAACTCAGTAGTGGATTTGAACATTGTGGGAGTATAAAATGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
3UTR GCA 72 bp AAAATAACTATATATGTACCCAATACAAGTATCAACTaGACTCACTCTGACCATTGCAAATGGCTAATTGGA +
Preference number: 3 (lower is better)
Translates to: KITIYVPNTSIN*THSDHCKWLIG
Trigger: TCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGGTACATATATAGTTATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CCA 90 bp TCTCTCTCTCTGTCTCTATCTCTGTCTCTCTCTGTCTCTTCCTTCTGTTCCTCTGCCGCCGCGGCCTCTTaGCCAGCAGCAATGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SLSLSLSLSLSVSSFCSSAAAAS*PAAMAH
Trigger: ATGGGCCATTGCTGCTGGCCAAGAGGCCGCGGCGGC...AGAGGAACAGAAGGAAGAGACAGAGAGAGACAGAGATAGAGACAGAGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR TCA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCAGCAGCTCGGGCAGCCTaGGGACCCCATAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: VNSTLKINHSHTHTIRHAAARAA*GPHSCA
Trigger: TGCGCAGCTATGGGGTCCTCAGGCTGCCCGAGCTGC...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CCA 90 bp TTATTGCTAAGAGGATATAGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGCTACCCCCGGGTaGCCATCAGCGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLLRGYRNLSLSLSLSLSPATPG*PSAPRA
Trigger: TGCTCTGGGCGCTGATGGCCACCCGGGGGTAGCGGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTATATCCTCTTAGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR GCA 90 bp CCCAATACAAGTATCAACTGCACTCACTCTGACCATTGCAAATGGCTAATTGGAGCCAGAGTGCCACGGTaGCATCACGGGAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: PNTSINCTHSDHCKWLIGARVPR*HHGSHS
Trigger: TGAGTGGCTCCCGTGATGGCACCGTGGCACTCTGGC...TCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR TCA 90 bp TCTCTCTCTCTGTCTCTATCTCTGTCTCTCTCTGTCTCTTCCTTCTGTTCCTCTAGGGAATGCTGCCATTaGACATGTCGGAATCCACCC +
Preference number: 4 (lower is better)
Translates to: SLSLSLSLSLSVSSFCSSRECCH*TCRNPP
Trigger: GGGTGGATTCCGACATGTTCAATGGCAGCATTCCCT...AGAGGAACAGAAGGAAGAGACAGAGAGAGACAGAGATAGAGACAGAGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CCA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCAATGCCACAGGTGGGTTaGGCACGGGTTTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VNSTLKINHSHTHTIRHAMPQVG*ARVCPG
Trigger: GCCAGGACAAACCCGTGCCCAACCCACCTGTGGCAT...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR TCA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCACTACCTGCCTGGCATTaGGCCACTGCGATGCGAACA +
Preference number: 4 (lower is better)
Translates to: VNSTLKINHSHTHTIRHALPAWH*ATAMRT
Trigger: TGTTCGCATCGCAGTGGCTCAATGCCAGGCAGGTAG...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CCA 90 bp TTATTGCTAAGAGGATATAGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAGGGACAACAGCCTaGACAGGGAGCTCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLRGYRNLSLSLSLSLSSGTTA*TGSSGL
Trigger: AAGCCCGGAGCTCCCTGTCCAGGCTGTTGTCCCTGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTATATCCTCTTAGCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CCA 90 bp TCTCTCTCTCTGTCTCTATCTCTGTCTCTCTCTGTCTCTTCCTTCTGTTCCTCTGAAAAGAGTCTGGACTaGCTGAGGCCCTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: SLSLSLSLSLSVSSFCSSEKSLD*LRPFPL
Trigger: TAGAGGAAAGGGCCTCAGCCAGTCCAGACTCTTTTC...AGAGGAACAGAAGGAAGAGACAGAGAGAGACAGAGATAGAGACAGAGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR GCA 90 bp TTATTGCTAAGAGGATATAGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCCACACACTACCTaGCTGGCATTGAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LLLRGYRNLSLSLSLSLSVPHTT*LALSHC
Trigger: GCAGTGGCTCAATGCCAGGCAGGTAGTGTGTGGCAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTATATCCTCTTAGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR GCA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCAGACACACATTCTCCCTaGAGTAAGGCAGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: VNSTLKINHSHTHTIRHADTHSP*SKAASG
Trigger: CCCTGAGGCTGCCTTACTGCAGGGAGAATGTGTGTC...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR GCA 90 bp TTATTGCTAAGAGGATATAGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGAACGCACACCTGTaGCTCCCTCTCGGGAACACA +
Preference number: 4 (lower is better)
Translates to: LLLRGYRNLSLSLSLSLSENAHL*LPLGNT
Trigger: TGTGTTCCCGAGAGGGAGGCACAGGTGTGCGTTCTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTATATCCTCTTAGCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR GCA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCAGTTTCTGCCACTGAATaGAAGGGCTCGCACTTTGCG +
Preference number: 4 (lower is better)
Translates to: VNSTLKINHSHTHTIRHAVSATE*KGSHFA
Trigger: CGCAAAGTGCGAGCCCTTGCATTCAGTGGCAGAAAC...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR GCA 90 bp CCCAATACAAGTATCAACTGCACTCACTCTGACCATTGCAAATGGCTAATTGGAGCAGTGAGTGTAGAGTaGGTTGGGGAATTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PNTSINCTHSDHCKWLIGAVSVE*VGEFLS
Trigger: ACTGAGGAATTCCCCAACGCACTCTACACTCACTGC...TCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CCA 90 bp TTATTGCTAAGAGGATATAGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGATCCGGCCAGTCTaGACATCAACCACGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LLLRGYRNLSLSLSLSLSVIRPV*TSTTKS
Trigger: GCTCTTCGTGGTTGATGTCCAGACTGGCCGGATCAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTATATCCTCTTAGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR TCA 90 bp TCTCTCTCTCTGTCTCTATCTCTGTCTCTCTCTGTCTCTTCCTTCTGTTCCTCTATACCGTGGAATTCCTaGATTATTGTGCCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: SLSLSLSLSLSVSSFCSSIPWNS*IIVPGN
Trigger: ATTCCCTGGCACAATAATTCAGGAATTCCACGGTAT...AGAGGAACAGAAGGAAGAGACAGAGAGAGACAGAGATAGAGACAGAGAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR GCA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCAAGACTGAGAACCCACTaGGTAGAGGGACAACTCATC +
Preference number: 4 (lower is better)
Translates to: VNSTLKINHSHTHTIRHARLRTH*VEGQLI
Trigger: GATGAGTTGTCCCTCTACGCAGTGGGTTCTCAGTCT...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CCA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCAACACAGGGTCTAGGGTaGGTAGCTGATAGACTGCTA +
Preference number: 4 (lower is better)
Translates to: VNSTLKINHSHTHTIRHATQGLG*VADRLL
Trigger: TAGCAGTCTATCAGCTACCCACCCTAGACCCTGTGT...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CCA 90 bp CCCAATACAAGTATCAACTGCACTCACTCTGACCATTGCAAATGGCTAATTGGAGTTAGTAGTTGCCCTTaGAATGGCTTCCATGTCCCT +
Preference number: 4 (lower is better)
Translates to: PNTSINCTHSDHCKWLIGVSSCP*NGFHVP
Trigger: AGGGACATGGAAGCCATTCCAAGGGCAACTACTAAC...TCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CCA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCAGAGTGTAGAGTGCGTTaGGGAATTCCTCAGTACCTC +
Preference number: 4 (lower is better)
Translates to: VNSTLKINHSHTHTIRHAECRVR*GIPQYL
Trigger: GAGGTACTGAGGAATTCCCCAACGCACTCTACACTC...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CCA 90 bp AGTAGTGCACCAAGGAGCGGCGAGCCACGGGCCGCCGCGGCCTCTTaGCCAGCAGCAATGGCCCATCCGCTTGGCCCGTTCCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SSAPRSGEPRAAAAS*PAAMAHPLGPFPPP
Trigger: CGGCGGCGGGAACGGGCCAAGCGGATGGGCCATTGCTGCTGGCCAAGAGGCCGCGGCGGCCCGTGGCTCGCCGCTCCTTGGTGCACTACT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CCA 90 bp CTGGATGGCGTGGATGCCACAGGTGGGTTGGGCACGGGTTTGTCCTaGCCCTCTGTCTCGCATCAGGGGAATGCGAGTGATCCGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LDGVDATGGLGTGLS*PSVSHQGNASDPAS
Trigger: ACTGGCCGGATCACTCGCATTCCCCTGATGCGAGACAGAGGGCCAGGACAAACCCGTGCCCAACCCACCTGTGGCATCCACGCCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS GCA 90 bp CCAGGGAATGCTGCCATTGAACATGTCGGAATCCACCCGCCAGAGTaGCACGGTGCCATCACGGGAGCCACTCACAGCCACGGTATCACT +
Preference number: 5 (lower is better)
Translates to: PGNAAIEHVGIHPPE*HGAITGATHSHGIT
Trigger: AGTGATACCGTGGCTGTGAGTGGCTCCCGTGATGGCACCGTGGCACTCTGGCGGGTGGATTCCGACATGTTCAATGGCAGCATTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS TCA 90 bp CACGGGTTTGTCCTGGCCCTCTGTCTCGCATCAGGGGAATGCGAGTaGTCCGGCCAGTCTGGACATCAACCACGAAGAGCGTGTTACACT +
Preference number: 5 (lower is better)
Translates to: HGFVLALCLASGECE*SGQSGHQPRRACYT
Trigger: AGTGTAACACGCTCTTCGTGGTTGATGTCCAGACTGGCCGGATCACTCGCATTCCCCTGATGCGAGACAGAGGGCCAGGACAAACCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS GCA 90 bp GCCATCCAGGGACACAGCTCCCAGCTCCTGGTTTCTGCCACTGAATaGAAGGGCTCGCACTTTGCGGTTACCTGGGTTAGTAGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: AIQGHSSQLLVSATE*KGSHFAVTWVSSCP
Trigger: AGGGCAACTACTAACCCAGGTAACCGCAAAGTGCGAGCCCTTGCATTCAGTGGCAGAAACCAGGAGCTGGGAGCTGTGTCCCTGGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS TCA 90 bp AATACCGTGGAATTCCTGAATTATTGTGCCAGGGAATGCTGCCATTaGACATGTCGGAATCCACCCGCCAGAGTGCCACGGTGCCATCAC +
Preference number: 5 (lower is better)
Translates to: NTVEFLNYCARECCH*TCRNPPARVPRCHH
Trigger: GTGATGGCACCGTGGCACTCTGGCGGGTGGATTCCGACATGTTCAATGGCAGCATTCCCTGGCACAATAATTCAGGAATTCCACGGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CAA 90 bp CCCAATACAAGTATCAACTGCACTCACTCTGACCATTGCAAATGGCTAATTGGAGGGTTGGGCACGGGTTaGTCCTGGCCCTCTGTCTCG +
Preference number: 5 (lower is better)
Translates to: PNTSINCTHSDHCKWLIGGLGTG*SWPSVS
Trigger: CGAGACAGAGGGCCAGGACAAACCCGTGCCCAACCC...TCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CAA 90 bp CCCAATACAAGTATCAACTGCACTCACTCTGACCATTGCAAATGGCTAATTGGAGATGCCACAGGTGGGTaGGGCACGGGTTTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: PNTSINCTHSDHCKWLIGDATGG*GTGLSW
Trigger: CCAGGACAAACCCGTGCCCAACCCACCTGTGGCATC...TCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS GCA 90 bp TCCCTTGGACGAATGTGTGAATACCGTGGAATTCCTGAATTATTGTaGCAGGGAATGCTGCCATTGAACATGTCGGAATCCACCCGCCAG +
Preference number: 5 (lower is better)
Translates to: SLGRMCEYRGIPELL*QGMLPLNMSESTRQ
Trigger: CTGGCGGGTGGATTCCGACATGTTCAATGGCAGCATTCCCTGGCACAATAATTCAGGAATTCCACGGTATTCACACATTCGTCCAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CAA 90 bp TCTCTCTCTCTGTCTCTATCTCTGTCTCTCTCTGTCTCTTCCTTCTGTTCCTCTCAGGGAATGCTGCCATaGAACATGTCGGAATCCACC +
Preference number: 5 (lower is better)
Translates to: SLSLSLSLSLSVSSFCSSQGMLP*NMSEST
Trigger: GGTGGATTCCGACATGTTCAATGGCAGCATTCCCTG...AGAGGAACAGAAGGAAGAGACAGAGAGAGACAGAGATAGAGACAGAGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CAA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCAGATGCGAACACCTTATaGAGGGGGCCTAGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VNSTLKINHSHTHTIRHADANTL*RGPRVS
Trigger: GCTGACCCTAGGCCCCCTCAATAAGGTGTTCGCATC...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CAA 90 bp GTCAACTCCACTTTGAAAATAAATCACTCACACACACACACAATCAGGCATGCAACTACCTGCCTGGCATaGAGCCACTGCGATGCGAAC +
Preference number: 5 (lower is better)
Translates to: VNSTLKINHSHTHTIRHATTCLA*SHCDAN
Trigger: GTTCGCATCGCAGTGGCTCAATGCCAGGCAGGTAGT...TGCATGCCTGATTGTGTGTGTGTGTGAGTGATTTATTTTCAAAGTGGAGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CAA 90 bp TTATTGCTAAGAGGATATAGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGAGCGTGTTACACTaGGTGCCACACACTACCTGC +
Preference number: 5 (lower is better)
Translates to: LLLRGYRNLSLSLSLSLSKSVLH*VPHTTC
Trigger: GCAGGTAGTGTGTGGCACCAAGTGTAACACGCTCTT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTATATCCTCTTAGCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS-3UTR CAA 90 bp TGCACTCACTCTGACCATTGCAAATGGCTAATTGGACTGTGTTTCTTGAATGTTGGAATTCCTGAATTATaGTGCCAGGGAATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: CTHSDHCKWLIGLCFLNVGIPEL*CQGMLP
Trigger: TGGCAGCATTCCCTGGCACAATAATTCAGGAATTCC...AACATTCAAGAAACACAGTCCAATTAGCCATTTGCAATGGTCAGAGTGAGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CCA 72 bp CGCGGCCTCTTGGCCAGCAGCAATGGCCCATCCGCTTaGCCCGTTCCCGCCGCCGCAGCCGCCCTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: RGLLASSNGPSA*PVPAAAAALPG
Trigger: GCCTGGGAGGGCGGCTGCGGCGGCGGGAACGGGCCAAGCGGATGGGCCATTGCTGCTGGCCAAGAGGCCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CCA 72 bp CCAAGGAGCGGCGAGCCACGGGCCGCCGCGGCCTCTTaGCCAGCAGCAATGGCCCATCCGCTTGGCCCGTTC +
Preference number: 6 (lower is better)
Translates to: PRSGEPRAAAAS*PAAMAHPLGPF
Trigger: GAACGGGCCAAGCGGATGGGCCATTGCTGCTGGCCAAGAGGCCGCGGCGGCCCGTGGCTCGCCGCTCCTTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CAA 72 bp GATGGCGTGGATGCCACAGGTGGGTTGGGCACGGGTTaGTCCTGGCCCTCTGTCTCGCATCAGGGGAATGCG +
Preference number: 6 (lower is better)
Translates to: DGVDATGGLGTG*SWPSVSHQGNA
Trigger: CGCATTCCCCTGATGCGAGACAGAGGGCCAGGACAAACCCGTGCCCAACCCACCTGTGGCATCCACGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CCA 72 bp GGATTCAGCTGGATGGCGTGGATGCCACAGGTGGGTTaGGCACGGGTTTGTCCTGGCCCTCTGTCTCGCATC +
Preference number: 6 (lower is better)
Translates to: GFSWMAWMPQVG*ARVCPGPLSRI
Trigger: GATGCGAGACAGAGGGCCAGGACAAACCCGTGCCCAACCCACCTGTGGCATCCACGCCATCCAGCTGAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CAA 90 bp ATTCAGCTGGATGGCGTGGATGCCACAGGTGGGTTGGGCACGGGTTaGTCCTGGCCCTCTGTCTCGCATCAGGGGAATGCGAGTGATCCG +
Preference number: 6 (lower is better)
Translates to: IQLDGVDATGGLGTG*SWPSVSHQGNASDP
Trigger: CGGATCACTCGCATTCCCCTGATGCGAGACAGAGGGCCAGGACAAACCCGTGCCCAACCCACCTGTGGCATCCACGCCATCCAGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS TCA 72 bp GTCCTGGCCCTCTGTCTCGCATCAGGGGAATGCGAGTaGTCCGGCCAGTCTGGACATCAACCACGAAGAGCG +
Preference number: 6 (lower is better)
Translates to: VLALCLASGECE*SGQSGHQPRRA
Trigger: CGCTCTTCGTGGTTGATGTCCAGACTGGCCGGATCACTCGCATTCCCCTGATGCGAGACAGAGGGCCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS TCA 72 bp CCAGGGACACAGCTCCCAGCTCCTGGTTTCTGCCACTaGATGCAAGGGCTCGCACTTTGCGGTTACCTGGGT +
Preference number: 6 (lower is better)
Translates to: PGTQLPAPGFCH*MQGLALCGYLG
Trigger: ACCCAGGTAACCGCAAAGTGCGAGCCCTTGCATTCAGTGGCAGAAACCAGGAGCTGGGAGCTGTGTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS GCA 72 bp GGACACAGCTCCCAGCTCCTGGTTTCTGCCACTGAATaGAAGGGCTCGCACTTTGCGGTTACCTGGGTTAGT +
Preference number: 6 (lower is better)
Translates to: GHSSQLLVSATE*KGSHFAVTWVS
Trigger: ACTAACCCAGGTAACCGCAAAGTGCGAGCCCTTGCATTCAGTGGCAGAAACCAGGAGCTGGGAGCTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CAA 90 bp GCTCCCAGCTCCTGGTTTCTGCCACTGAATGCAAGGGCTCGCACTTaGCGGTTACCTGGGTTAGTAGTTGCCCTTGGAATGGCTTCCATG +
Preference number: 6 (lower is better)
Translates to: APSSWFLPLNARART*RLPGLVVALGMASM
Trigger: CATGGAAGCCATTCCAAGGGCAACTACTAACCCAGGTAACCGCAAAGTGCGAGCCCTTGCATTCAGTGGCAGAAACCAGGAGCTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CCA 72 bp GCCACTGAATGCAAGGGCTCGCACTTTGCGGTTACCTaGGTTAGTAGTTGCCCTTGGAATGGCTTCCATGTC +
Preference number: 6 (lower is better)
Translates to: ATECKGSHFAVT*VSSCPWNGFHV
Trigger: GACATGGAAGCCATTCCAAGGGCAACTACTAACCCAGGTAACCGCAAAGTGCGAGCCCTTGCATTCAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS TCA 72 bp GAATTCCTGAATTATTGTGCCAGGGAATGCTGCCATTaGACATGTCGGAATCCACCCGCCAGAGTGCCACGG +
Preference number: 6 (lower is better)
Translates to: EFLNYCARECCH*TCRNPPARVPR
Trigger: CCGTGGCACTCTGGCGGGTGGATTCCGACATGTTCAATGGCAGCATTCCCTGGCACAATAATTCAGGAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CAA 72 bp GGAATTCCTGAATTATTGTGCCAGGGAATGCTGCCATaGAACATGTCGGAATCCACCCGCCAGAGTGCCACG +
Preference number: 6 (lower is better)
Translates to: GIPELLCQGMLP*NMSESTRQSAT
Trigger: CGTGGCACTCTGGCGGGTGGATTCCGACATGTTCAATGGCAGCATTCCCTGGCACAATAATTCAGGAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CAA 90 bp GAATACCGTGGAATTCCTGAATTATTGTGCCAGGGAATGCTGCCATaGAACATGTCGGAATCCACCCGCCAGAGTGCCACGGTGCCATCA +
Preference number: 6 (lower is better)
Translates to: EYRGIPELLCQGMLP*NMSESTRQSATVPS
Trigger: TGATGGCACCGTGGCACTCTGGCGGGTGGATTCCGACATGTTCAATGGCAGCATTCCCTGGCACAATAATTCAGGAATTCCACGGTATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CAA 90 bp ATGTCCCTTGGACGAATGTGTGAATACCGTGGAATTCCTGAATTATaGTGCCAGGGAATGCTGCCATTGAACATGTCGGAATCCACCCGC +
Preference number: 6 (lower is better)
Translates to: MSLGRMCEYRGIPEL*CQGMLPLNMSESTR
Trigger: GCGGGTGGATTCCGACATGTTCAATGGCAGCATTCCCTGGCACAATAATTCAGGAATTCCACGGTATTCACACATTCGTCCAAGGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS GCA 72 bp CGAATGTGTGAATACCGTGGAATTCCTGAATTATTGTaGCAGGGAATGCTGCCATTGAACATGTCGGAATCC +
Preference number: 6 (lower is better)
Translates to: RMCEYRGIPELL*QGMLPLNMSES
Trigger: GGATTCCGACATGTTCAATGGCAGCATTCCCTGGCACAATAATTCAGGAATTCCACGGTATTCACACATTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2
CDS CAA 72 bp GGACGAATGTGTGAATACCGTGGAATTCCTGAATTATaGTGCCAGGGAATGCTGCCATTGAACATGTCGGAA +
Preference number: 6 (lower is better)
Translates to: GRMCEYRGIPEL*CQGMLPLNMSE
Trigger: TTCCGACATGTTCAATGGCAGCATTCCCTGGCACAATAATTCAGGAATTCCACGGTATTCACACATTCGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115057.2