Pregenerated sensors for DCAF12L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045284Ensembl transcript IDs: ENSMUST00000060481.9, ENSMUST00000115056.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGAAGTCCAAAGAACGGTaGGGAGACCCAGAAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPKSKER*GDPENS Trigger: AGAGTTTTCTGGGTCTCCCCACCGTTCTTTGGACTT...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACGCACACTGGATACTCTaGGGCAGTTCCACTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHAHWIL*GSSTLR Trigger: TCTCAGAGTGGAACTGCCCCAGAGTATCCAGTGTGC...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115056.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGTCTATACCTTAGAGCAGTATATTTTCTGCCCTGTCTGCCATACATTCTACTGGAAAGTATATGCATaGAAAGTCCAAAGAACGGTG | + |
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Preference number: 2 (lower is better) Translates to: PVYTLEQYIFCPVCHTFYWKVYA*KVQRTV Trigger: CACCGTTCTTTGGACTTTTCATGCATATACTTTCCA...GTAGAATGTATGGCAGACAGGGCAGAAAATATACTGCTCTAAGGTATAGACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGAAACTCAAGTCCAAAGAACGGTaGGGAGACCCAGAAAACTCT | + |
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Preference number: 2 (lower is better) Translates to: HSTFMYLISLCRMMALKLKSKER*GDPENS Trigger: AGAGTTTTCTGGGTCTCCCCACCGTTCTTTGGACTT...GAGTTTCAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGCTCCTCTATTTGAAAATTATACTGCATTGTCAAGATCCCATATTATCATCTCTCACAGTGAGCTaGATAGGCTCAGACTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PQLLYLKIILHCQDPILSSLTVS*IGSDFF Trigger: GAAGAAGTCTGAGCCTATCCAGCTCACTGTGAGAGA...TGATAATATGGGATCTTGACAATGCAGTATAATTTTCAAATAGAGGAGCTGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR TCA 90 bp | GCCATACATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGCATCTCTTTTTCTTCTaGGAAGCACACTGGATACTC | + |
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Preference number: 2 (lower is better) Translates to: AIHSTFMYLISLCRMMALHLFFF*EAHWIL Trigger: GAGTATCCAGTGTGCTTCTCAGAAGAAAAAGAGATG...CAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATGTATGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR CCA 90 bp | CCATTGTGTATTCTTGACTCACCTTTAGATCCTTTCAACAATTTAGGTTTAGGATCTCTCACAGTGAGCTaGATAGGCTCAGACTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PLCILDSPLDPFNNLGLGSLTVS*IGSDFF Trigger: GAAGAAGTCTGAGCCTATCCAGCTCACTGTGAGAGA...TCCTAAACCTAAATTGTTGAAAGGATCTAAAGGTGAGTCAAGAATACACAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTGTGTATTCTTGACTCACCTTTAGATCCTTTCAACAATTTAGGTTTAGGACATCTCTTTTTCTTCTaGGAAGCACACTGGATACTC | + |
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Preference number: 2 (lower is better) Translates to: PLCILDSPLDPFNNLGLGHLFFF*EAHWIL Trigger: GAGTATCCAGTGTGCTTCTCAGAAGAAAAAGAGATG...TCCTAAACCTAAATTGTTGAAAGGATCTAAAGGTGAGTCAAGAATACACAATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACTGGAAAGTATATGCATaGAAAGTCCAAAGAACGGTG | + |
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Preference number: 2 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHWKVYA*KVQRTV Trigger: CACCGTTCTTTGGACTTTTCATGCATATACTTTCCA...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR TCA 90 bp | TTAATATCCCTGTGTCGAATGATGGCACTGAAACTCTGTGAAATTTACTCAAATAATGAGCAGAATACTTaGATACCTAAACCATCCTCG | + |
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Preference number: 2 (lower is better) Translates to: LISLCRMMALKLCEIYSNNEQNT*IPKPSS Trigger: CGAGGATGGTTTAGGTATTCAAGTATTCTGCTCATT...ATTTGAGTAAATTTCACAGAGTTTCAGTGCCATCATTCGACACAGGGATATTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGTCACAAAATAAACATTaGGAGCTTACAAAGGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPSQNKH*ELTKGE Trigger: CTCCCCCTTTGTAAGCTCCAAATGTTTATTTTGTGA...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCCCCCAGCTCCTCTATTaGAAAATTATACTGCATTGT | + |
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Preference number: 3 (lower is better) Translates to: LAPFSFSAFSPREKTNLSPQLLY*KIILHC Trigger: ACAATGCAGTATAATTTTCAAATAGAGGAGCTGGGG...GGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR-3UTR CAA 90 bp | AATATATCCACAAGTCTTGATAGTACTAAGGCAAGAAGTGAAAACAAGTGCACTAAACAAGTGCACTCTTaGATCAATATGAAGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: NISTSLDSTKARSENKCTKQVHS*INMKTE Trigger: CTCTGTCTTCATATTGATCAAAGAGTGCACTTGTTT...AGTGCACTTGTTTTCACTTCTTGCCTTAGTACTATCAAGACTTGTGGATATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| 3UTR GCA 72 bp | GTCTATACCTTAGAGCAGTATATTTTCTGCCCTGTCTaGCATACATTCTACATTTATGTACTTAATATCCCT | + |
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Preference number: 3 (lower is better) Translates to: VYTLEQYIFCPV*HTFYIYVLNIP Trigger: AGGGATATTAAGTACATAAATGTAGAATGTATGGCAGACAGGGCAGAAAATATACTGCTCTAAGGTATAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGTGGGCGGCGAGCGGTTaGAGGGCCCTGCAGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPWAASG*RALQAA Trigger: CGCAGCCTGCAGGGCCCTCCAACCGCTCGCCGCCCA...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGGGCTGCGGCGTCTCCTaGTCTGCGGGAGAGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPGCGVS*SAGEGC Trigger: GCAGCCCTCTCCCGCAGAGCAGGAGACGCCGCAGCC...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGAGGGCCCTGCAGGCTaGGGCGTCTCCTGCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LAPFSFSAFSPREKTNLSEGPAG*GVSCSA Trigger: CGCAGAGCAGGAGACGCCGCAGCCTGCAGGGCCCTC...GGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR TCA 90 bp | CTGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCTTCACCATGGAGAGGTaGGCTACGGGCCGCCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LAPFSFSAFSPREKTNLSFTMER*ATGRRG Trigger: GCCGCGGCGGCCCGTAGCTCACCTCTCCATGGTGAA...GGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR TCA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGTTCACCATGGAGAGGTaGGCTACGGGCCGCCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPFTMER*ATGRRG Trigger: GCCGCGGCGGCCCGTAGCTCACCTCTCCATGGTGAA...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | ATTTTCTGCCCTGTCTGCCATACATTCTACATTTATGTACTTAATATCCCTGTGCCAGCGAGCCCCGGGTaGCCATCTGCGCCCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: IFCPVCHTFYIYVLNIPVPASPG*PSAPSA Trigger: AGCGCTGGGCGCAGATGGCCACCCGGGGCTCGCTGG...CACAGGGATATTAAGTACATAAATGTAGAATGTATGGCAGACAGGGCAGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | CATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGAAACTCGAGGGCCCTGCAGGCTaGGGCGTCTCCTGCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: HSTFMYLISLCRMMALKLEGPAG*GVSCSA Trigger: CGCAGAGCAGGAGACGCCGCAGCCTGCAGGGCCCTC...GAGTTTCAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACTGGGCGGCGAGCGGTTaGAGGGCCCTGCAGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHWAASG*RALQAA Trigger: CGCAGCCTGCAGGGCCCTCCAACCGCTCGCCGCCCA...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | TGCCATACATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTCGGCGTCTCCTGCTCTaGGGGAGAGGGCTGCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: CHTFYIYVLNIPVSNDGTRRLLL*GRGLRL Trigger: CAGACGCAGCCCTCTCCCGCAGAGCAGGAGACGCCG...AGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATGTATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGCTCCTCTATTTGAAAATTATACTGCATTGTCAAGATCCCATATTATCACGGCGTCTCCTGCTCTaGGGGAGAGGGCTGCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PQLLYLKIILHCQDPILSRRLLL*GRGLRL Trigger: CAGACGCAGCCCTCTCCCGCAGAGCAGGAGACGCCG...TGATAATATGGGATCTTGACAATGCAGTATAATTTTCAAATAGAGGAGCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR TCA 90 bp | GCCATACATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGTTCAGCTCCACAGCATaGATGCCACAGGAGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: AIHSTFMYLISLCRMMALFSSTA*MPQEGG Trigger: CCCGCCCTCCTGTGGCATTCATGCTGTGGAGCTGAA...CAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATGTATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACTGGACCCCTCTGCGTTaGCCTCCCCAGCTGTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHWTPLR*PPQLSP Trigger: TGGCGACAGCTGGGGAGGGCAACGCAGAGGGGTCCA...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | AATATATCCACAAGTCTTGATAGTACTAAGGCAAGAAGTGAAAACAAGTGCACTTGGACCCCTCTGCGTTaGCCTCCCCAGCTGTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: NISTSLDSTKARSENKCTWTPLR*PPQLSP Trigger: TGGCGACAGCTGGGGAGGGCAACGCAGAGGGGTCCA...AGTGCACTTGTTTTCACTTCTTGCCTTAGTACTATCAAGACTTGTGGATATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | ATTTTCTGCCCTGTCTGCCATACATTCTACATTTATGTACTTAATATCCCTGTGGCTCCACAGCATGAATaGCACAGGAGGGCGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: IFCPVCHTFYIYVLNIPVAPQHE*HRRAGH Trigger: GTGGCCCGCCCTCCTGTGGCATTCATGCTGTGGAGC...CACAGGGATATTAAGTACATAAATGTAGAATGTATGGCAGACAGGGCAGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGAGACTGCCAGGCTATTaGGGTTTTCACCTCCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPRLPGY*GFHLQL Trigger: CAACTGGAGGTGAAAACCCCAATAGCCTGGCAGTCT...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGACAGCTCCCAGCTCCTaGTTTTTGTTGCTGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPTAPSS*FLLLKA Trigger: TGCCTTCAGCAACAAAAACCAGGAGCTGGGAGCTGT...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR TCA 90 bp | ATTTTCTGCCCTGTCTGCCATACATTCTACATTTATGTACTTAATATCCCTGTGTTCAGCTCCACAGCATaGATGCCACAGGAGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: IFCPVCHTFYIYVLNIPVFSSTA*MPQEGG Trigger: CCCGCCCTCCTGTGGCATTCATGCTGTGGAGCTGAA...CACAGGGATATTAAGTACATAAATGTAGAATGTATGGCAGACAGGGCAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR TCA 90 bp | CCAGTCTATACCTTAGAGCAGTATATTTTCTGCCCTGTCTGCCATACATTCTACACTCATCACAGTAGGTaGGACACACGTTCTCACGGC | + |
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Preference number: 4 (lower is better) Translates to: PVYTLEQYIFCPVCHTFYTHHSR*DTRSHG Trigger: GCCGTGAGAACGTGTGTCTCACCTACTGTGATGAGT...GTAGAATGTATGGCAGACAGGGCAGAAAATATACTGCTCTAAGGTATAGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | CCATTGTGTATTCTTGACTCACCTTTAGATCCTTTCAACAATTTAGGTTTAGGAGCTCCACAGCATGAATaGCACAGGAGGGCGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PLCILDSPLDPFNNLGLGAPQHE*HRRAGH Trigger: GTGGCCCGCCCTCCTGTGGCATTCATGCTGTGGAGC...TCCTAAACCTAAATTGTTGAAAGGATCTAAAGGTGAGTCAAGAATACACAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | CCAGTCTATACCTTAGAGCAGTATATTTTCTGCCCTGTCTGCCATACATTCTACGTTTTCACCTCCAGTTaGCAAGAGGGTCTTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: PVYTLEQYIFCPVCHTFYVFTSS*QEGLGG Trigger: CCCTCCAAGACCCTCTTGGCAACTGGAGGTGAAAAC...GTAGAATGTATGGCAGACAGGGCAGAAAATATACTGCTCTAAGGTATAGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCCCCACAGTGACAATATaGTGGTGGACACTCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LAPFSFSAFSPREKTNLSPTVTI*WWTLRE Trigger: TTCTCTGAGTGTCCACCAGCATATTGTCACTGTGGG...GGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGGTGACAATATGCTGGTaGACACTCAGAGAACGAACA | + |
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Preference number: 4 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPVTICW*TLRERT Trigger: TGTTCGTTCTCTGAGTGTCCACCAGCATATTGTCAC...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | CCATTGTGTATTCTTGACTCACCTTTAGATCCTTTCAACAATTTAGGTTTAGGATCTTGGTCAGCAGCATaGACCCCTCTGCGTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PLCILDSPLDPFNNLGLGSWSAA*TPLRCP Trigger: AGGGCAACGCAGAGGGGTCCATGCTGCTGACCAAGA...TCCTAAACCTAAATTGTTGAAAGGATCTAAAGGTGAGTCAAGAATACACAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACTCTTGGTCAGCAGCATaGACCCCTCTGCGTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHSWSAA*TPLRCP Trigger: AGGGCAACGCAGAGGGGTCCATGCTGCTGACCAAGA...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | CCAGTCTATACCTTAGAGCAGTATATTTTCTGCCCTGTCTGCCATACATTCTACGAGTGTAGAGCGCATTaGGGAAATCTTCTACACCAG | + |
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Preference number: 4 (lower is better) Translates to: PVYTLEQYIFCPVCHTFYECRAH*GNLLHQ Trigger: CTGGTGTAGAAGATTTCCCCAATGCGCTCTACACTC...GTAGAATGTATGGCAGACAGGGCAGAAAATATACTGCTCTAAGGTATAGACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | ATTTTCTGCCCTGTCTGCCATACATTCTACATTTATGTACTTAATATCCCTGTGGTTTTCACCTCCAGTTaGCAAGAGGGTCTTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: IFCPVCHTFYIYVLNIPVVFTSS*QEGLGG Trigger: CCCTCCAAGACCCTCTTGGCAACTGGAGGTGAAAAC...CACAGGGATATTAAGTACATAAATGTAGAATGTATGGCAGACAGGGCAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | GCCATACATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGGGAATGCGCATGATGTaGTCGGTCTTGACATCAACC | + |
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Preference number: 4 (lower is better) Translates to: AIHSTFMYLISLCRMMALGMRMM*SVLTST Trigger: GGTTGATGTCAAGACCGACCACATCATGCGCATTCC...CAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATGTATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR GCA 90 bp | ATTTTCTGCCCTGTCTGCCATACATTCTACATTTATGTACTTAATATCCCTGTGCTGGCATTGAGCCACTaGGATGCGAACACCTTATTG | + |
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Preference number: 4 (lower is better) Translates to: IFCPVCHTFYIYVLNIPVLALSH*DANTLL Trigger: CAATAAGGTGTTCGCATCGCAGTGGCTCAATGCCAG...CACAGGGATATTAAGTACATAAATGTAGAATGTATGGCAGACAGGGCAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | TGCCATACATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGGAATGCGCATGATGTaGTCGGTCTTGACATCAACC | + |
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Preference number: 4 (lower is better) Translates to: CHTFYIYVLNIPVSNDGTGMRMM*SVLTST Trigger: GGTTGATGTCAAGACCGACCACATCATGCGCATTCC...AGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATGTATGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CCA 90 bp | CATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGAAACTCAGACTGCCAGGCTATTaGGGTTTTCACCTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSTFMYLISLCRMMALKLRLPGY*GFHLQL Trigger: CAACTGGAGGTGAAAACCCCAATAGCCTGGCAGTCT...GAGTTTCAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CCA 90 bp | TTAATATCCCTGTGTCGAATGATGGCACTGAAACTCTGTGAAATTTACTCAAATAAGAGCAGAGAACCGTaGCCTGTTCCCACAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LISLCRMMALKLCEIYSNKSREP*PVPTVT Trigger: TGTCACTGTGGGAACAGGCCACGGTTCTCTGCTCTT...ATTTGAGTAAATTTCACAGAGTTTCAGTGCCATCATTCGACACAGGGATATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CCA 90 bp | CCATTGTGTATTCTTGACTCACCTTTAGATCCTTTCAACAATTTAGGTTTAGGAAAGAGCAGAGAACCGTaGCCTGTTCCCACAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PLCILDSPLDPFNNLGLGKSREP*PVPTVT Trigger: TGTCACTGTGGGAACAGGCCACGGTTCTCTGCTCTT...TCCTAAACCTAAATTGTTGAAAGGATCTAAAGGTGAGTCAAGAATACACAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR TCA 90 bp | CATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGAAACTCAAGCAATGCTGCCATTaGACATGTCAGGATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HSTFMYLISLCRMMALKLKQCCH*TCQDPP Trigger: AGGTGGATCCTGACATGTTCAATGGCAGCATTGCTT...GAGTTTCAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR GCA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACCTGGCATTGAGCCACTaGGATGCGAACACCTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHLALSH*DANTLL Trigger: CAATAAGGTGTTCGCATCGCAGTGGCTCAATGCCAG...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR GCA 90 bp | CATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGAAACTCGGTGTCACTCATCCATaGAATGGCAAAGATCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSTFMYLISLCRMMALKLGVTHP*NGKDPV Trigger: GACTGGATCTTTGCCATTGCATGGATGAGTGACACC...GAGTTTCAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR GCA 90 bp | CATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGAAACTCCCCACAGTGACAATATaGTGGTGGACACTCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSTFMYLISLCRMMALKLPTVTI*WWTLRE Trigger: TTCTCTGAGTGTCCACCAGCATATTGTCACTGTGGG...GAGTTTCAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CCA 90 bp | TGCCATACATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTCACTCATCCATGCAATaGCAAAGATCCAGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CHTFYIYVLNIPVSNDGTHSSMQ*QRSSPC Trigger: ACAGGGACTGGATCTTTGCCATTGCATGGATGAGTG...AGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATGTATGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR TCA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACTCTGTAGGACTGATGTaGGCATACACAGGTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHSVGLM*AYTGSP Trigger: AGGACTACCTGTGTATGCTCACATCAGTCCTACAGA...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR TCA 90 bp | CCATTGTGTATTCTTGACTCACCTTTAGATCCTTTCAACAATTTAGGTTTAGGATCTGTAGGACTGATGTaGGCATACACAGGTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLCILDSPLDPFNNLGLGSVGLM*AYTGSP Trigger: AGGACTACCTGTGTATGCTCACATCAGTCCTACAGA...TCCTAAACCTAAATTGTTGAAAGGATCTAAAGGTGAGTCAAGAATACACAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR GCA 90 bp | CCATTGTGTATTCTTGACTCACCTTTAGATCCTTTCAACAATTTAGGTTTAGGAGGTGTCACTCATCCATaGAATGGCAAAGATCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLCILDSPLDPFNNLGLGGVTHP*NGKDPV Trigger: GACTGGATCTTTGCCATTGCATGGATGAGTGACACC...TCCTAAACCTAAATTGTTGAAAGGATCTAAAGGTGAGTCAAGAATACACAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CCA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACCACTCATCCATGCAATaGCAAAGATCCAGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHHSSMQ*QRSSPC Trigger: ACAGGGACTGGATCTTTGCCATTGCATGGATGAGTG...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTGCCCTGTCTGCCATACATTCTACATTTATGTACTTAATATCCCTGTGACAGTGACAATATGCTaGTGGACACTCAGAGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: IFCPVCHTFYIYVLNIPVTVTIC*WTLRER Trigger: TCGTTCTCTGAGTGTCCACCAGCATATTGTCACTGT...CACAGGGATATTAAGTACATAAATGTAGAATGTATGGCAGACAGGGCAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CCA 90 bp | TTAATATCCCTGTGTCGAATGATGGCACTGAAACTCTGTGAAATTTACTCAAATGAGTGTAGAGCGCATTaGGGAAATCTTCTACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LISLCRMMALKLCEIYSNECRAH*GNLLHQ Trigger: CTGGTGTAGAAGATTTCCCCAATGCGCTCTACACTC...ATTTGAGTAAATTTCACAGAGTTTCAGTGCCATCATTCGACACAGGGATATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CCA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACGTGACAATATGCTGGTaGACACTCAGAGAACGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHVTICW*TLRERT Trigger: TGTTCGTTCTCTGAGTGTCCACCAGCATATTGTCAC...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CCA 90 bp | AATATATCCACAAGTCTTGATAGTACTAAGGCAAGAAGTGAAAACAAGTGCACTACAGTGACAATATGCTaGTGGACACTCAGAGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: NISTSLDSTKARSENKCTTVTIC*WTLRER Trigger: TCGTTCTCTGAGTGTCCACCAGCATATTGTCACTGT...AGTGCACTTGTTTTCACTTCTTGCCTTAGTACTATCAAGACTTGTGGATATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| 3UTR CAA 72 bp | CTTGAATACCTAAACCATCCTCGTCATCTGAGATTTTaGATAGAAACACAAGATTCTACGACAATTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEYLNHPRHLRF*IETQDSTTIIS Trigger: GGAAATAATTGTCGTAGAATCTTGTGTTTCTATCAAAAATCTCAGATGACGAGGATGGTTTAGGTATTCAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS GCA 90 bp | ACTGCGCAGATCTCCCTCGAAGCCAGCGAGCCCCGGGTGGCCATCTaGGCCCAGCGCTCGGCCCTTCAGGTAGTTCACCATGGAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TAQISLEASEPRVAI*AQRSALQVVHHGEV Trigger: CACCTCTCCATGGTGAACTACCTGAAGGGCCGAGCGCTGGGCGCAGATGGCCACCCGGGGCTCGCTGGCTTCGAGGGAGATCTGCGCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CCA 90 bp | AAGAGCAGAGAACCGTGGCCTGTTCCCACAGTGACAATATGCTGGTaGACACTCAGAGAACGAACACCGGTGCCTCCCTCTCTGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KSREPWPVPTVTICW*TLRERTPVPPSLEH Trigger: GTGCTCCAGAGAGGGAGGCACCGGTGTTCGTTCTCTGAGTGTCCACCAGCATATTGTCACTGTGGGAACAGGCCACGGTTCTCTGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CCA 90 bp | ACAGGTGAGCTTGAGCTTCCTTCCAGAGGGCACAGGAAACATGTCTaGATTGGCCGCGGACCTTTCCTCAAGGAACTTCTGGGCACGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TGELELPSRGHRKHV*IGRGPFLKELLGTD Trigger: ATCCGTGCCCAGAAGTTCCTTGAGGAAAGGTCCGCGGCCAATCCAGACATGTTTCCTGTGCCCTCTGGAAGGAAGCTCAAGCTCACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS TCA 90 bp | CATACACAGGTAGTCCTGCATCCTTGTGCCAAGCAATGCTGCCATTaGACATGTCAGGATCCACCTTCCAAAGTGCCACGGTGCCGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HTQVVLHPCAKQCCH*TCQDPPSKVPRCRR Trigger: GCGACGGCACCGTGGCACTTTGGAAGGTGGATCCTGACATGTTCAATGGCAGCATTGCTTGGCACAAGGATGCAGGACTACCTGTGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CAA 90 bp | GCCATACATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGGTGGGCGGCGAGCGGTaGGAGGGCCCTGCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AIHSTFMYLISLCRMMALVGGER*EGPAGC Trigger: GCAGCCTGCAGGGCCCTCCAACCGCTCGCCGCCCAC...CAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATGTATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTCTGCCCTGTCTGCCATACATTCTACATTTATGTACTTAATATCCCTGTGGTGGGCGGCGAGCGGTaGGAGGGCCCTGCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IFCPVCHTFYIYVLNIPVVGGER*EGPAGC Trigger: GCAGCCTGCAGGGCCCTCCAACCGCTCGCCGCCCAC...CACAGGGATATTAAGTACATAAATGTAGAATGTATGGCAGACAGGGCAGAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS GCA 90 bp | CAAGGACACAGCTCCCAGCTCCTGGTTTTTGTTGCTGAAGGCAAGTaGTCTCACTTTGCGGTTACCTGGATTGGTAGTGGCTTTGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QGHSSQLLVFVAEGK*SHFAVTWIGSGFGD Trigger: ATCCCCAAAGCCACTACCAATCCAGGTAACCGCAAAGTGAGAGCACTTGCCTTCAGCAACAAAAACCAGGAGCTGGGAGCTGTGTCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CAA 90 bp | CATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGAAACTCATGGACCCCTCTGCGTaGCCCTCCCCAGCTGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSTFMYLISLCRMMALKLMDPSA*PSPAVA Trigger: GGCGACAGCTGGGGAGGGCAACGCAGAGGGGTCCAT...GAGTTTCAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CAA 90 bp | CCCCAGCTCCTCTATTTGAAAATTATACTGCATTGTCAAGATCCCATATTATCAATGGACCCCTCTGCGTaGCCCTCCCCAGCTGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PQLLYLKIILHCQDPILSMDPSA*PSPAVA Trigger: GGCGACAGCTGGGGAGGGCAACGCAGAGGGGTCCAT...TGATAATATGGGATCTTGACAATGCAGTATAATTTTCAAATAGAGGAGCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CAA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGTTGCGGTTACCTGGATaGGTAGTGGCTTTGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPLRLPG*VVALGM Trigger: CATCCCCAAAGCCACTACCAATCCAGGTAACCGCAA...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CAA 90 bp | TGGCTCCTTTCTCATTTTCAGCCTTCTCACCTAGGGAGAAAACCAATCTATCCGAGCTCCTGGTTTTTGTaGCTGAAGGCAAGTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLLSHFQPSHLGRKPIYPSSWFL*LKASAL Trigger: GAGAGCACTTGCCTTCAGCAACAAAAACCAGGAGCT...CGGATAGATTGGTTTTCTCCCTAGGTGAGAAGGCTGAAAATGAGAAAGGAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTCTATACCTTAGAGCAGTATATTTTCTGCCCTGTCTGCCATACATTCTACCCCAGCTCCTGGTTTTaGTTGCTGAAGGCAAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PVYTLEQYIFCPVCHTFYPSSWF*LLKASA Trigger: AGCACTTGCCTTCAGCAACAAAAACCAGGAGCTGGG...GTAGAATGTATGGCAGACAGGGCAGAAAATATACTGCTCTAAGGTATAGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CAA 90 bp | GCCATACATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTGAGCTCCTGGTTTTTGTaGCTGAAGGCAAGTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AIHSTFMYLISLCRMMALSSWFL*LKASAL Trigger: GAGAGCACTTGCCTTCAGCAACAAAAACCAGGAGCT...CAGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATGTATGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CAA 90 bp | TGCCATACATTCTACATTTATGTACTTAATATCCCTGTGTCGAATGATGGCACTAGAAGATCATCCTGGTaGATCCAGCCACTGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CHTFYIYVLNIPVSNDGTRRSSW*IQPLPQ Trigger: CTGTGGCAGTGGCTGGATCAACCAGGATGATCTTCT...AGTGCCATCATTCGACACAGGGATATTAAGTACATAAATGTAGAATGTATGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS-3UTR CAA 90 bp | AATATATCCACAAGTCTTGATAGTACTAAGGCAAGAAGTGAAAACAAGTGCACTTTGCGGTTACCTGGATaGGTAGTGGCTTTGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NISTSLDSTKARSENKCTLRLPG*VVALGM Trigger: CATCCCCAAAGCCACTACCAATCCAGGTAACCGCAA...AGTGCACTTGTTTTCACTTCTTGCCTTAGTACTATCAAGACTTGTGGATATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CAA 90 bp | CCATTGTGTATTCTTGACTCACCTTTAGATCCTTTCAACAATTTAGGTTTAGGAAGAAGATCATCCTGGTaGATCCAGCCACTGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PLCILDSPLDPFNNLGLGRRSSW*IQPLPQ Trigger: CTGTGGCAGTGGCTGGATCAACCAGGATGATCTTCT...TCCTAAACCTAAATTGTTGAAAGGATCTAAAGGTGAGTCAAGAATACACAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS-3UTR CAA 90 bp | AGATCCTTTCAACAATTTAGGTTTAGGACTGAACAACATGTAGTGTATCAACACCAAGCAATGCTGCCATaGAACATGTCAGGATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RSFQQFRFRTEQHVVYQHQAMLP*NMSGST Trigger: GGTGGATCCTGACATGTTCAATGGCAGCATTGCTTG...GTGTTGATACACTACATGTTGTTCAGTCCTAAACCTAAATTGTTGAAAGGATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS GCA 72 bp | CCGCCGCGGCCTCTTGGTCAGCAGCATGGACCCCTCTaGGTTGCCCTCCCCAGCTGTCGCCATCGGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPRPLGQQHGPL*VALPSCRHRRC Trigger: GCAGCGCCGATGGCGACAGCTGGGGAGGGCAACGCAGAGGGGTCCATGCTGCTGACCAAGAGGCCGCGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CCA 72 bp | GAGCTACGGGCCGCCGCGGCCTCTTGGTCAGCAGCATaGACCCCTCTGCGTTGCCCTCCCCAGCTGTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ELRAAAASWSAA*TPLRCPPQLSP Trigger: TGGCGACAGCTGGGGAGGGCAACGCAGAGGGGTCCATGCTGCTGACCAAGAGGCCGCGGCGGCCCGTAGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CCA 72 bp | CCATGGAGAGGTGAGCTACGGGCCGCCGCGGCCTCTTaGTCAGCAGCATGGACCCCTCTGCGTTGCCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PWRGELRAAAAS*SAAWTPLRCPP Trigger: GGGAGGGCAACGCAGAGGGGTCCATGCTGCTGACCAAGAGGCCGCGGCGGCCCGTAGCTCACCTCTCCATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CCA 72 bp | GGCCTTGGCAATCTCCTAGGCACACCGGATCCAGAGTaGGCAACTGGTAGACTGCCAGGCTATTGGGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLGNLLGTPDPE*ATGRLPGYWGF Trigger: AAAACCCCAATAGCCTGGCAGTCTACCAGTTGCCCACTCTGGATCCGGTGTGCCTAGGAGATTGCCAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CCA 72 bp | GAACCGTGGCCTGTTCCCACAGTGACAATATGCTGGTaGACACTCAGAGAACGAACACCGGTGCCTCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EPWPVPTVTICW*TLRERTPVPPS Trigger: AGAGGGAGGCACCGGTGTTCGTTCTCTGAGTGTCCACCAGCATATTGTCACTGTGGGAACAGGCCACGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CCA 72 bp | GCTTCCTTCCAGAGGGCACAGGAAACATGTCTGGATTaGCCGCGGACCTTTCCTCAAGGAACTTCTGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ASFQRAQETCLD*PRTFPQGTSGH Trigger: GTGCCCAGAAGTTCCTTGAGGAAAGGTCCGCGGCCAATCCAGACATGTTTCCTGTGCCCTCTGGAAGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CAA 90 bp | GTGAGCTTGAGCTTCCTTCCAGAGGGCACAGGAAACATGTCTGGATaGGCCGCGGACCTTTCCTCAAGGAACTTCTGGGCACGGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSLSFLPEGTGNMSG*AADLSSRNFWARMS Trigger: TGACATCCGTGCCCAGAAGTTCCTTGAGGAAAGGTCCGCGGCCAATCCAGACATGTTTCCTGTGCCCTCTGGAAGGAAGCTCAAGCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CCA 72 bp | GATCCAGAGTGGGCAACTGGTAGACTGCCAGGCTATTaGGGTTTTCACCTCCAGTTGCCAAGAGGGTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DPEWATGRLPGY*GFHLQLPRGSW Trigger: CCAAGACCCTCTTGGCAACTGGAGGTGAAAACCCCAATAGCCTGGCAGTCTACCAGTTGCCCACTCTGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CAA 90 bp | GCATACACAGGTAGTCCTGCATCCTTGTGCCAAGCAATGCTGCCATaGAACATGTCAGGATCCACCTTCCAAAGTGCCACGGTGCCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AYTGSPASLCQAMLP*NMSGSTFQSATVPS Trigger: CGACGGCACCGTGGCACTTTGGAAGGTGGATCCTGACATGTTCAATGGCAGCATTGCTTGGCACAAGGATGCAGGACTACCTGTGTATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS GCA 72 bp | AGCTCCCAGCTCCTGGTTTTTGTTGCTGAAGGCAAGTaGTCTCACTTTGCGGTTACCTGGATTGGTAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSQLLVFVAEGK*SHFAVTWIGSG Trigger: GCCACTACCAATCCAGGTAACCGCAAAGTGAGAGCACTTGCCTTCAGCAACAAAAACCAGGAGCTGGGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
||
| CDS CAA 72 bp | GGTAGTCCTGCATCCTTGTGCCAAGCAATGCTGCCATaGAACATGTCAGGATCCACCTTCCAAAGTGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: GSPASLCQAMLP*NMSGSTFQSAT Trigger: CGTGGCACTTTGGAAGGTGGATCCTGACATGTTCAATGGCAGCATTGCTTGGCACAAGGATGCAGGACTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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| CDS CAA 72 bp | TCCTGGTTTTTGTTGCTGAAGGCAAGTGCTCTCACTTaGCGGTTACCTGGATTGGTAGTGGCTTTGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: SWFLLLKASALT*RLPGLVVALGM Trigger: CATCCCCAAAGCCACTACCAATCCAGGTAACCGCAAAGTGAGAGCACTTGCCTTCAGCAACAAAAACCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060481.9 ENSMUST00000115056.2 |
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