Pregenerated sensors for DCAF12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028436Ensembl transcript IDs: ENSMUST00000030145.9
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGGCTGGGGAGAGGATTGTCTTTATCTAGGCTGTGATGTGGCCTaGAGTCCCCAGTCTGGGCGAGCAGACAGGAGGTCGGGAGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: GGWGEDCLYLGCDVA*SPQSGRADRRSGVE Trigger: TTCCACTCCCGACCTCCTGTCTGCTCGCCCAGACTGGGGACTGCAGGCCACATCACAGCCTAGATAAAGACAATCCTCTCCCCAGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR CCA 90 bp | ACTGCCTGCTCTCGGTCAGATCAGACCCTGTCAGAGGCAGGAGGCTaGGGAGAGGATTGTCTTTATCTAGGCTGTGATGTGGCCTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: TACSRSDQTLSEAGG*GEDCLYLGCDVACS Trigger: ACTGCAGGCCACATCACAGCCTAGATAAAGACAATCCTCTCCCCAGCCTCCTGCCTCTGACAGGGTCTGATCTGACCGAGAGCAGGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR GCA 90 bp | ATGAGCCAACAGAGCAGGACAGTGACTTCCAACACTAAGCCCTGCTaGACTGAGAACAGATCCCACACACAAAGCACTCGCTACAAACCA | + |
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Preference number: 1 (lower is better) Translates to: MSQQSRTVTSNTKPC*TENRSHTQSTRYKP Trigger: TGGTTTGTAGCGAGTGCTTTGTGTGTGGGATCTGTTCTCAGTGCAGCAGGGCTTAGTGTTGGAAGTCACTGTCCTGCTCTGTTGGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR GCA 90 bp | GGAATGAGCCAACAGAGCAGGACAGTGACTTCCAACACTAAGCCCTaGTGCACTGAGAACAGATCCCACACACAAAGCACTCGCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: GMSQQSRTVTSNTKP*CTENRSHTQSTRYK Trigger: TTTGTAGCGAGTGCTTTGTGTGTGGGATCTGTTCTCAGTGCAGCAGGGCTTAGTGTTGGAAGTCACTGTCCTGCTCTGTTGGCTCATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR GCA 90 bp | TTTGAGAGAAACAAGCAAATTACCAATCACAGCTACACTGTCACATaGAGCGATGCTGGCACAGCCACCTGTCACTACCCTAGGAATGAG | + |
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Preference number: 1 (lower is better) Translates to: FERNKQITNHSYTVT*SDAGTATCHYPRNE Trigger: CTCATTCCTAGGGTAGTGACAGGTGGCTGTGCCAGCATCGCTGCATGTGACAGTGTAGCTGTGATTGGTAATTTGCTTGTTTCTCTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR TCA 90 bp | CTAAAACCTGTGGAGGATGCTGTGTCCTACGGTGGGCCTGCCGCTTCCCTCCCCAACAGAGCAGGACAGTaGCTTCCAACACTAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LKPVEDAVSYGGPAASLPNRAGQ*LPTLSP Trigger: AGGGCTTAGTGTTGGAAGTCACTGTCCTGCTCTGTT...GGGGAGGGAAGCGGCAGGCCCACCGTAGGACACAGCATCCTCCACAGGTTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTACTAGGGTGGGGAGAGCTTCCTTTCCACATGATGTTCGGAAGACAACATTTGGAGTCCTGGGATaGAGCCTCCCCTCCCATCCG | + |
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Preference number: 2 (lower is better) Translates to: QGTRVGRASFPHDVRKTTFGVLG*SLPSHP Trigger: CGGATGGGAGGGGAGGCTGCATCCCAGGACTCCAAA...TGTTGTCTTCCGAACATCATGTGGAAAGGAAGCTCTCCCCACCCTAGTACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCCACCTGTCACTACCCTAGGAATGAGCCAACAGAGCAGGACAGTGACTTCCTCTTTATCTAGGCTGTaGTGTGGCCTGCAGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QPPVTTLGMSQQSRTVTSSLSRL*CGLQSP Trigger: TGGGGACTGCAGGCCACATCACAGCCTAGATAAAGA...GGAAGTCACTGTCCTGCTCTGTTGGCTCATTCCTAGGGTAGTGACAGGTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCACCTGTCACTACCCTAGGAATGAGCCAACAGAGCAGGACAGTGACTTCCTCAGAGGCAGGAGGCTaGGGAGAGGATTGTCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: QPPVTTLGMSQQSRTVTSSEAGG*GEDCLY Trigger: ATAAAGACAATCCTCTCCCCAGCCTCCTGCCTCTGA...GGAAGTCACTGTCCTGCTCTGTTGGCTCATTCCTAGGGTAGTGACAGGTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR GCA 90 bp | ATTATTCTAAAACCTGTGGAGGATGCTGTGTCCTACGGTGGGCCTGCCGCTTCCAACACTAAGCCCTGCTaGACTGAGAACAGATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: IILKPVEDAVSYGGPAASNTKPC*TENRSH Trigger: GTGGGATCTGTTCTCAGTGCAGCAGGGCTTAGTGTT...GGAAGCGGCAGGCCCACCGTAGGACACAGCATCCTCCACAGGTTTTAGAATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCCACCTGTCACTACCCTAGGAATGAGCCAACAGAGCAGGACAGTGACTTCCACTCAAGGGTTTTCCTaGTGTGTCTGTTTCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QPPVTTLGMSQQSRTVTSTQGFS*CVCFSS Trigger: GGAAGAGAAACAGACACACCAGGAAAACCCTTGAGT...GGAAGTCACTGTCCTGCTCTGTTGGCTCATTCCTAGGGTAGTGACAGGTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR CCA 90 bp | CACACAAAGCACTCGCTACAAACCACACCTTCCTGGACAGACAAATTAGAAAATCTGCAGTCCCCAGTCTaGGCGAGCAGACAGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: HTKHSLQTTPSWTDKLENLQSPV*ASRQEV Trigger: GACCTCCTGTCTGCTCGCCCAGACTGGGGACTGCAG...ATTTTCTAATTTGTCTGTCCAGGAAGGTGTGGTTTGTAGCGAGTGCTTTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR CCA 90 bp | ATTATTCTAAAACCTGTGGAGGATGCTGTGTCCTACGGTGGGCCTGCCGCTTCCAGAGCATGGAAGAACTaGGGAGCAACTGAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: IILKPVEDAVSYGGPAASRAWKN*GATEKL Trigger: CAGTTTCTCAGTTGCTCCCCAGTTCTTCCATGCTCT...GGAAGCGGCAGGCCCACCGTAGGACACAGCATCCTCCACAGGTTTTAGAATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR CCA 90 bp | CACACAAAGCACTCGCTACAAACCACACCTTCCTGGACAGACAAATTAGAAAATGACAGTTTGGAGTCCTaGGATGCAGCCTCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HTKHSLQTTPSWTDKLENDSLES*DAASPP Trigger: GGGAGGGGAGGCTGCATCCCAGGACTCCAAACTGTC...ATTTTCTAATTTGTCTGTCCAGGAAGGTGTGGTTTGTAGCGAGTGCTTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR GCA 72 bp | AGGACAGGTAGGCCTGGACAGTTTGGAGTCCTGGGATaGAGCCTCCCCTCCCATCCGGCTTCTCTAACTCAA | + |
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Preference number: 3 (lower is better) Translates to: RTGRPGQFGVLG*SLPSHPASLTQ Trigger: TTGAGTTAGAGAAGCCGGATGGGAGGGGAGGCTGCATCCCAGGACTCCAAACTGTCCAGGCCTACCTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR GCA 72 bp | GGAGAGGATTGTCTTTATCTAGGCTGTGATGTGGCCTaGAGTCCCCAGTCTGGGCGAGCAGACAGGAGGTCG | + |
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Preference number: 3 (lower is better) Translates to: GEDCLYLGCDVA*SPQSGRADRRS Trigger: CGACCTCCTGTCTGCTCGCCCAGACTGGGGACTGCAGGCCACATCACAGCCTAGATAAAGACAATCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR GCA 72 bp | CAGAGCAGGACAGTGACTTCCAACACTAAGCCCTGCTaGACTGAGAACAGATCCCACACACAAAGCACTCGC | + |
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Preference number: 3 (lower is better) Translates to: QSRTVTSNTKPC*TENRSHTQSTR Trigger: GCGAGTGCTTTGTGTGTGGGATCTGTTCTCAGTGCAGCAGGGCTTAGTGTTGGAAGTCACTGTCCTGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR GCA 72 bp | GGGGAGCAACTGAGAAACTGGGTGCAGGTGTATGACTaGATTTCTCAGGCAGCACTGTGTGTCTCAGGGTAC | + |
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Preference number: 3 (lower is better) Translates to: GEQLRNWVQVYD*ISQAALCVSGY Trigger: GTACCCTGAGACACACAGTGCTGCCTGAGAAATGCAGTCATACACCTGCACCCAGTTTCTCAGTTGCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR CCA 72 bp | TCTCGGTCAGATCAGACCCTGTCAGAGGCAGGAGGCTaGGGAGAGGATTGTCTTTATCTAGGCTGTGATGTG | + |
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Preference number: 3 (lower is better) Translates to: SRSDQTLSEAGG*GEDCLYLGCDV Trigger: CACATCACAGCCTAGATAAAGACAATCCTCTCCCCAGCCTCCTGCCTCTGACAGGGTCTGATCTGACCGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR TCA 72 bp | AACTGGGGAGCAACTGAGAAACTGGGTGCAGGTGTATaGCTGCATTTCTCAGGCAGCACTGTGTGTCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: NWGATEKLGAGV*LHFSGSTVCLR Trigger: CCTGAGACACACAGTGCTGCCTGAGAAATGCAGTCATACACCTGCACCCAGTTTCTCAGTTGCTCCCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR CCA 72 bp | TTCTCAGGCAGCACTGTGTGTCTCAGGGTACTAGGGTaGGGAGAGCTTCCTTTCCACATGATGTTCGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: FSGSTVCLRVLG*GELPFHMMFGR Trigger: TCTTCCGAACATCATGTGGAAAGGAAGCTCTCCCCACCCTAGTACCCTGAGACACACAGTGCTGCCTGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR GCA 72 bp | CAACAGAGCAGGACAGTGACTTCCAACACTAAGCCCTaGTGCACTGAGAACAGATCCCACACACAAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: QQSRTVTSNTKP*CTENRSHTQST Trigger: AGTGCTTTGTGTGTGGGATCTGTTCTCAGTGCAGCAGGGCTTAGTGTTGGAAGTCACTGTCCTGCTCTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR CCA 72 bp | CCCTCCCATCCGGCTTCTCTAACTCAAGGGTTTTCCTaGTGTGTCTGTTTCTCTTCCTACAATGTCGGACCT | + |
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Preference number: 3 (lower is better) Translates to: PSHPASLTQGFS*CVCFSSYNVGP Trigger: AGGTCCGACATTGTAGGAAGAGAAACAGACACACCAGGAAAACCCTTGAGTTAGAGAAGCCGGATGGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR GCA 72 bp | AACAAGCAAATTACCAATCACAGCTACACTGTCACATaGAGCGATGCTGGCACAGCCACCTGTCACTACCCT | + |
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Preference number: 3 (lower is better) Translates to: NKQITNHSYTVT*SDAGTATCHYP Trigger: AGGGTAGTGACAGGTGGCTGTGCCAGCATCGCTGCATGTGACAGTGTAGCTGTGATTGGTAATTTGCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| 3UTR-3UTR CAA 90 bp | CACACAAAGCACTCGCTACAAACCACACCTTCCTGGACAGACAAATTAGAAAATAGAACGTCCCAGCTTTaGGATTTCTGCATAGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: HTKHSLQTTPSWTDKLENRTSQL*DFCIEP Trigger: AGGCTCTATGCAGAAATCCAAAAGCTGGGACGTTCT...ATTTTCTAATTTGTCTGTCCAGGAAGGTGTGGTTTGTAGCGAGTGCTTTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | CTAAAACCTGTGGAGGATGCTGTGTCCTACGGTGGGCCTGCCGCTTCCCTCCCCCCAAACTGCGGGCCCTaGGCGTCGCTCCCGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LKPVEDAVSYGGPAASLPPNCGP*ASLPAP Trigger: AGGAGCCGGGAGCGACGCTCAGGGCCCGCAGTTTGG...GGGGAGGGAAGCGGCAGGCCCACCGTAGGACACAGCATCCTCCACAGGTTTTAG 67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | GCTCGAGACTGCCTGCTCTCGGTCAGATCAGACCCTGTCAGAGGCAGGAGGCTGCATAGACCCATCCCGTaGGCCAGACACTGCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: ARDCLLSVRSDPVRGRRLHRPIP*ARHCHS Trigger: ACTATGGCAGTGTCTGGCTCACGGGATGGGTCTATG...CAGCCTCCTGCCTCTGACAGGGTCTGATCTGACCGAGAGCAGGCAGTCTCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR CCA 90 bp | TGCCTGCTCTCGGTCAGATCAGACCCTGTCAGAGGCAGGAGGCTGGGGAGAGGAGTACGATGGCTGCCGTaGATCCAAGAAGGAGACATG | + |
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Preference number: 4 (lower is better) Translates to: CLLSVRSDPVRGRRLGRGVRWLP*IQEGDM Trigger: CATGTCTCCTTCTTGGATCCACGGCAGCCATCGTAC...TCCTCTCCCCAGCCTCCTGCCTCTGACAGGGTCTGATCTGACCGAGAGCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | TGTCTTTATCTAGGCTGTGATGTGGCCTGCAGTCCCCAGTCTGGGCGAGCAGACCTTTTGTGCAGCGAATaGTCCCAGCCAAACTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: CLYLGCDVACSPQSGRADLLCSE*SQPNCG Trigger: CCCGCAGTTTGGCTGGGATCATTCGCTGCACAAAAG...GTCTGCTCGCCCAGACTGGGGACTGCAGGCCACATCACAGCCTAGATAAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR GCA 90 bp | CTAAAACCTGTGGAGGATGCTGTGTCCTACGGTGGGCCTGCCGCTTCCCTCCCCGTGTGTTGCATTTCGTaGCACACACCACTTGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: LKPVEDAVSYGGPAASLPVCCIS*HTPLAY Trigger: ATAGGCAAGTGGTGTGTGGCACGAAATGCAACACAC...GGGGAGGGAAGCGGCAGGCCCACCGTAGGACACAGCATCCTCCACAGGTTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR GCA 90 bp | TGTCTTTATCTAGGCTGTGATGTGGCCTGCAGTCCCCAGTCTGGGCGAGCAGACTTTCAGATTCTCCCCTaGGAGTCTGGGCTTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: CLYLGCDVACSPQSGRADFQILP*ESGLGP Trigger: GGGTCCAAGCCCAGACTCGCAGGGGAGAATCTGAAA...GTCTGCTCGCCCAGACTGGGGACTGCAGGCCACATCACAGCCTAGATAAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | CAGTCCCCAGTCTGGGCGAGCAGACAGGAGGTCGGGAGTGGAAGTAACACACACTTAAGGCCTTGTGAGTaGTGTGAGCATACACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QSPVWASRQEVGSGSNTHLRPCE*CEHTQG Trigger: TCCCTGTGTATGCTCACATCACTCACAAGGCCTTAA...GTGTGTGTTACTTCCACTCCCGACCTCCTGTCTGCTCGCCCAGACTGGGGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR CCA 90 bp | TGTCTTTATCTAGGCTGTGATGTGGCCTGCAGTCCCCAGTCTGGGCGAGCAGACGGAATCTTGGTGATCTaGCCTGTCTGGACATCCACG | + |
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Preference number: 4 (lower is better) Translates to: CLYLGCDVACSPQSGRADGILVI*PVWTST Trigger: CGTGGATGTCCAGACAGGCCAGATCACCAAGATTCC...GTCTGCTCGCCCAGACTGGGGACTGCAGGCCACATCACAGCCTAGATAAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR CCA 90 bp | TGCCTGCTCTCGGTCAGATCAGACCCTGTCAGAGGCAGGAGGCTGGGGAGAGGAGGTTTGTATCCTCCTTaGGGATATCCTTTAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CLLSVRSDPVRGRRLGRGGLYPP*GYPLRP Trigger: AGGCCTTAAAGGATATCCCCAAGGAGGATACAAACC...TCCTCTCCCCAGCCTCCTGCCTCTGACAGGGTCTGATCTGACCGAGAGCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR GCA 90 bp | GATCAGACCCTGTCAGAGGCAGGAGGCTGGGGAGAGGATTGTCTTTATCTAGGCACGTTGTACGATGGCTaGCGTGGATCCAAGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: DQTLSEAGGWGEDCLYLGTLYDG*RGSKKE Trigger: CTCCTTCTTGGATCCACGGCAGCCATCGTACAACGT...GCCTAGATAAAGACAATCCTCTCCCCAGCCTCCTGCCTCTGACAGGGTCTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | CAGCCACCTGTCACTACCCTAGGAATGAGCCAACAGAGCAGGACAGTGACTTCCGAATGGGAATCTTGGTaGTCTGGCCTGTCTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: QPPVTTLGMSQQSRTVTSEWESW*SGLSGH Trigger: ATGTCCAGACAGGCCAGATCACCAAGATTCCCATTC...GGAAGTCACTGTCCTGCTCTGTTGGCTCATTCCTAGGGTAGTGACAGGTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | CAGGGTACTAGGGTGGGGAGAGCTTCCTTTCCACATGATGTTCGGAAGACAACAGCCCACTGCATACACTaGCCACTCACTACCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: QGTRVGRASFPHDVRKTTAHCIH*PLTTIG Trigger: GCCTATGGTAGTGAGTGGTCAGTGTATGCAGTGGGC...TGTTGTCTTCCGAACATCATGTGGAAAGGAAGCTCTCCCCACCCTAGTACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | CAGGGTACTAGGGTGGGGAGAGCTTCCTTTCCACATGATGTTCGGAAGACAACATGGAGCAGACAGACTTaGCGTTGTACGATGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QGTRVGRASFPHDVRKTTWSRQT*RCTMAA Trigger: GGCAGCCATCGTACAACGTCAAGTCTGTCTGCTCCA...TGTTGTCTTCCGAACATCATGTGGAAAGGAAGCTCTCCCCACCCTAGTACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | TGTCTTTATCTAGGCTGTGATGTGGCCTGCAGTCCCCAGTCTGGGCGAGCAGACGGACCCATAACAAGCTaGGAGCCTCTCTTCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: CLYLGCDVACSPQSGRADGPITS*EPLFQK Trigger: TTTTTGGAAGAGAGGCTCTCAGCTTGTTATGGGTCC...GTCTGCTCGCCCAGACTGGGGACTGCAGGCCACATCACAGCCTAGATAAAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR CCA 90 bp | CAATCACAGCTACACTGTCACATGCAGCGATGCTGGCACAGCCACCTGTCACTACTGCGAGTCTGGGCTTaGACCCATAACAAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: QSQLHCHMQRCWHSHLSLLRVWA*THNKLR Trigger: TCTCAGCTTGTTATGGGTCCAAGCCCAGACTCGCAG...TAGTGACAGGTGGCTGTGCCAGCATCGCTGCATGTGACAGTGTAGCTGTGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | AGAAACTGGGTGCAGGTGTATGACTGCATTTCTCAGGCAGCACTGTGTGTCTCAAAGGAGACATGCGCTTaGGAGCCCACTGCATACACT | + |
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Preference number: 4 (lower is better) Translates to: RNWVQVYDCISQAALCVSKETCA*EPTAYT Trigger: AGTGTATGCAGTGGGCTCTCAAGCGCATGTCTCCTT...TGAGACACACAGTGCTGCCTGAGAAATGCAGTCATACACCTGCACCCAGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR GCA 90 bp | CAGCCACCTGTCACTACCCTAGGAATGAGCCAACAGAGCAGGACAGTGACTTCCAGGATTCAGTTCAATTaGATGGATACCACAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: QPPVTTLGMSQQSRTVTSRIQFN*MDTTAL Trigger: CAGGGCTGTGGTATCCATGCAATTGAACTGAATCCT...GGAAGTCACTGTCCTGCTCTGTTGGCTCATTCCTAGGGTAGTGACAGGTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR CCA 90 bp | CAGGGTACTAGGGTGGGGAGAGCTTCCTTTCCACATGATGTTCGGAAGACAACACTTGACGTTGTACGATaGCTGCCGTGGATCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: QGTRVGRASFPHDVRKTTLDVVR*LPWIQE Trigger: TTCTTGGATCCACGGCAGCCATCGTACAACGTCAAG...TGTTGTCTTCCGAACATCATGTGGAAAGGAAGCTCTCCCCACCCTAGTACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR TCA 90 bp | CAGGGTACTAGGGTGGGGAGAGCTTCCTTTCCACATGATGTTCGGAAGACAACAGAAATTCTCTCTCCTTaGGGAGACTGGGAAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: QGTRVGRASFPHDVRKTTEILSP*GDWEAV Trigger: AACAGCTTCCCAGTCTCCTCAAGGAGAGAGAATTTC...TGTTGTCTTCCGAACATCATGTGGAAAGGAAGCTCTCCCCACCCTAGTACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR CCA 90 bp | CAGGGTACTAGGGTGGGGAGAGCTTCCTTTCCACATGATGTTCGGAAGACAACAGGGTGTAAACAGCATTaGGGAAGAAGTCAATGTCCG | + |
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Preference number: 4 (lower is better) Translates to: QGTRVGRASFPHDVRKTTGCKQH*GRSQCP Trigger: CGGACATTGACTTCTTCCCCAATGCTGTTTACACCC...TGTTGTCTTCCGAACATCATGTGGAAAGGAAGCTCTCCCCACCCTAGTACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR GCA 90 bp | CACATGATGTTCGGAAGACAACAACTGGCTTGCAAGTTAAAAACAAAAACAACAAGGGAGGGGGCCCCCTaGCACAAAGAGTTTCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: HMMFGRQQLACKLKTKTTREGAP*HKEFRS Trigger: GGAACGAAACTCTTTGTGGCAGGGGGCCCCCTCCCT...TGTTGTTTTTGTTTTTAACTTGCAAGCCAGTTGTTGTCTTCCGAACATCATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR CCA 90 bp | CTAGATTATAGGATGATTATTCTAAAACCTGTGGAGGATGCTGTGTCCTACGGTTCTCCCCTGCGAGTCTaGGCTTGGACCCATAACAAG | + |
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Preference number: 4 (lower is better) Translates to: LDYRMIILKPVEDAVSYGSPLRV*AWTHNK Trigger: CTTGTTATGGGTCCAAGCCCAGACTCGCAGGGGAGA...ACCGTAGGACACAGCATCCTCCACAGGTTTTAGAATAATCATCCTATAATCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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| CDS-3UTR CCA 90 bp | AGAAACTGGGTGCAGGTGTATGACTGCATTTCTCAGGCAGCACTGTGTGTCTCAGTTTTCTCGACAATATaGCAATTTGGTGGAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNWVQVYDCISQAALCVSVFSTI*QFGGKE Trigger: CTCCTTTCCACCAAATTGCCATATTGTCGAGAAAAC...TGAGACACACAGTGCTGCCTGAGAAATGCAGTCATACACCTGCACCCAGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR TCA 90 bp | AATCAAACAAGGAAACTGAGGGTGGAAGTTAGTGTAAATCTGCATTTTGGGAGATTAAGGGTCCCGAGGTaGAATTCTCTCTCCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQTRKLRVEVSVNLHFGRLRVPR*NSLSLR Trigger: CCTCAAGGAGAGAGAATTTCACCTCGGGACCCTTAA...TCTCCCAAAATGCAGATTTACACTAACTTCCACCCTCAGTTTCCTTGTTTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR TCA 90 bp | CACATGATGTTCGGAAGACAACAACTGGCTTGCAAGTTAAAAACAAAAACAACACCTTGTTCTTGTTGTTaGAGGCTAAAGCCCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HMMFGRQQLACKLKTKTTPCSCC*RLKPAP Trigger: AGGTGCGGGCTTTAGCCTTCAACAACAAGAACAAGG...TGTTGTTTTTGTTTTTAACTTGCAAGCCAGTTGTTGTCTTCCGAACATCATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | GCTCGAGACTGCCTGCTCTCGGTCAGATCAGACCCTGTCAGAGGCAGGAGGCTGCCCAACTCCTTGTTCTaGTTGTTGAAGGCTAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARDCLLSVRSDPVRGRRLPNSLF*LLKAKA Trigger: GGCTTTAGCCTTCAACAACAAGAACAAGGAGTTGGG...CAGCCTCCTGCCTCTGACAGGGTCTGATCTGACCGAGAGCAGGCAGTCTCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS TCA 90 bp | TCACTGATCGAATCCCACTGCCTCGTTCCCTGGAGCAGACAGACTTaGCGTTGTACGATGGCTGCCGTGGATCCAAGAAGGAGACATGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLIESHCLVPWSRQT*RCTMAAVDPRRRHA Trigger: CGCATGTCTCCTTCTTGGATCCACGGCAGCCATCGTACAACGTCAAGTCTGTCTGCTCCAGGGAACGAGGCAGTGGGATTCGATCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | GCTCGAGACTGCCTGCTCTCGGTCAGATCAGACCCTGTCAGAGGCAGGAGGCTGAAGGATTCAGTTCAATaGCATGGATACCACAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ARDCLLSVRSDPVRGRRLKDSVQ*HGYHSP Trigger: AGGGCTGTGGTATCCATGCAATTGAACTGAATCCTT...CAGCCTCCTGCCTCTGACAGGGTCTGATCTGACCGAGAGCAGGCAGTCTCGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCACCTGTCACTACCCTAGGAATGAGCCAACAGAGCAGGACAGTGACTTCCCAGACAGACTTGACGTaGTACGATGGCTGCCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QPPVTTLGMSQQSRTVTSQTDLT*YDGCRG Trigger: TCCACGGCAGCCATCGTACAACGTCAAGTCTGTCTG...GGAAGTCACTGTCCTGCTCTGTTGGCTCATTCCTAGGGTAGTGACAGGTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | ATTATTCTAAAACCTGTGGAGGATGCTGTGTCCTACGGTGGGCCTGCCGCTTCCGCAAGACTGTTAGGGTaGTCTCCTCCAGTGGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: IILKPVEDAVSYGGPAASARLLG*SPPVAR Trigger: CCTAGCCACTGGAGGAGACAACCCTAACAGTCTTGC...GGAAGCGGCAGGCCCACCGTAGGACACAGCATCCTCCACAGGTTTTAGAATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTTTATCTAGGCTGTGATGTGGCCTGCAGTCCCCAGTCTGGGCGAGCAGACTCCTTGTTCTTGTTGTaGAAGGCTAAAGCCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: CLYLGCDVACSPQSGRADSLFLL*KAKART Trigger: GGTGCGGGCTTTAGCCTTCAACAACAAGAACAAGGA...GTCTGCTCGCCCAGACTGGGGACTGCAGGCCACATCACAGCCTAGATAAAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | CAATCACAGCTACACTGTCACATGCAGCGATGCTGGCACAGCCACCTGTCACTAGAAGGAGACATGCGCTaGAGAGCCCACTGCATACAC | + |
|
Preference number: 5 (lower is better) Translates to: QSQLHCHMQRCWHSHLSLEGDMR*RAHCIH Trigger: GTGTATGCAGTGGGCTCTCAAGCGCATGTCTCCTTC...TAGTGACAGGTGGCTGTGCCAGCATCGCTGCATGTGACAGTGTAGCTGTGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCACCTGTCACTACCCTAGGAATGAGCCAACAGAGCAGGACAGTGACTTCCGGGTTTGTATCCTCCTaGGGGATATCCTTTAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QPPVTTLGMSQQSRTVTSGFVSS*GISFKA Trigger: GGCCTTAAAGGATATCCCCAAGGAGGATACAAACCC...GGAAGTCACTGTCCTGCTCTGTTGGCTCATTCCTAGGGTAGTGACAGGTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | GATCAGACCCTGTCAGAGGCAGGAGGCTGGGGAGAGGATTGTCTTTATCTAGGCACCGCTCCCAACTCCTaGTTCTTGTTGTTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DQTLSEAGGWGEDCLYLGTAPNS*FLLLKA Trigger: AGCCTTCAACAACAAGAACAAGGAGTTGGGAGCGGT...GCCTAGATAAAGACAATCCTCTCCCCAGCCTCCTGCCTCTGACAGGGTCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CCA 90 bp | GGTTCCCGGTCTTTCAGAATGGGAATCTTGGTGATCTGGCCTGTCTaGACATCCACGACAAAGAGTGTGTTGCATTTCGTGCCACACACC | + |
|
Preference number: 5 (lower is better) Translates to: GSRSFRMGILVIWPV*TSTTKSVLHFVPHT Trigger: GGTGTGTGGCACGAAATGCAACACACTCTTTGTCGTGGATGTCCAGACAGGCCAGATCACCAAGATTCCCATTCTGAAAGACCGGGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | CAATCACAGCTACACTGTCACATGCAGCGATGCTGGCACAGCCACCTGTCACTATTCAGAATGGGAATCTaGGTGATCTGGCCTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSQLHCHMQRCWHSHLSLFRMGI*VIWPVW Trigger: CCAGACAGGCCAGATCACCAAGATTCCCATTCTGAA...TAGTGACAGGTGGCTGTGCCAGCATCGCTGCATGTGACAGTGTAGCTGTGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CCA 90 bp | ACACCTCCAGGTTCCCGGTCTTTCAGAATGGGAATCTTGGTGATCTaGCCTGTCTGGACATCCACGACAAAGAGTGTGTTGCATTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPPGSRSFRMGILVI*PVWTSTTKSVLHFV Trigger: CACGAAATGCAACACACTCTTTGTCGTGGATGTCCAGACAGGCCAGATCACCAAGATTCCCATTCTGAAAGACCGGGAACCTGGAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | TGCACTGAGAACAGATCCCACACACAAAGCACTCGCTACAAACCACACCTTCCTCGTGCCACACACCACTaGCCTATGATTCAACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CTENRSHTQSTRYKPHLPRATHH*PMIQPL Trigger: CAGTGGTTGAATCATAGGCAAGTGGTGTGTGGCACG...AGGAAGGTGTGGTTTGTAGCGAGTGCTTTGTGTGTGGGATCTGTTCTCAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS TCA 90 bp | GTTCTAGAAGGATTCAGTTCAATTGCATGGATACCACAGCCCTGCTaGGTCACACCTCCAGGTTCCCGGTCTTTCAGAATGGGAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLEGFSSIAWIPQPC*VTPPGSRSFRMGIL Trigger: CAAGATTCCCATTCTGAAAGACCGGGAACCTGGAGGTGTGACTCAGCAGGGCTGTGGTATCCATGCAATTGAACTGAATCCTTCTAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS TCA 90 bp | CCGGGTTTGTATCCTCCTTGGGGATATCCTTTAAGGCCTTGTGAGTaGTGTGAGCATACACAGGGACTGGTGACACGTTATGTCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGLYPPWGYPLRPCE*CEHTQGLVTRYVLH Trigger: ATGCAAGACATAACGTGTCACCAGTCCCTGTGTATGCTCACATCACTCACAAGGCCTTAAAGGATATCCCCAAGGAGGATACAAACCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGTACTAGGGTGGGGAGAGCTTCCTTTCCACATGATGTTCGGAAGACAACAGAAAAGATCCAATCCTaGTGTCCATCATCACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QGTRVGRASFPHDVRKTTEKIQS*CPSSPT Trigger: TGTGGGTGATGATGGACACAAGGATTGGATCTTTTC...TGTTGTCTTCCGAACATCATGTGGAAAGGAAGCTCTCCCCACCCTAGTACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | ATTATTCTAAAACCTGTGGAGGATGCTGTGTCCTACGGTGGGCCTGCCGCTTCCACTGCCATAGTATCGTaGATCCACGCAATAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IILKPVEDAVSYGGPAASTAIVS*IHAIEK Trigger: CTTTTCTATTGCGTGGATCAACGATACTATGGCAGT...GGAAGCGGCAGGCCCACCGTAGGACACAGCATCCTCCACAGGTTTTAGAATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | CAATCACAGCTACACTGTCACATGCAGCGATGCTGGCACAGCCACCTGTCACTATGTCTTGCATCACTTTaGGTCAACACATCATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QSQLHCHMQRCWHSHLSLCLASL*VNTSSV Trigger: GACAGATGATGTGTTGACCAAAAGTGATGCAAGACA...TAGTGACAGGTGGCTGTGCCAGCATCGCTGCATGTGACAGTGTAGCTGTGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | ATTATTCTAAAACCTGTGGAGGATGCTGTGTCCTACGGTGGGCCTGCCGCTTCCGTGACACGTTATGTCTaGCATCACTTTTGGTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: IILKPVEDAVSYGGPAASVTRYV*HHFWST Trigger: TGTTGACCAAAAGTGATGCAAGACATAACGTGTCAC...GGAAGCGGCAGGCCCACCGTAGGACACAGCATCCTCCACAGGTTTTAGAATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS TCA 90 bp | TTTCAGATTCTCCCCTGCGAGTCTGGGCTTGGACCCATAACAAGCTaGGAGCCTCTCTTCCAAAAATCTTTGAGCTCGGATGTCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FQILPCESGLGPITS*EPLFQKSLSSDVIE Trigger: TTCTATGACATCCGAGCTCAAAGATTTTTGGAAGAGAGGCTCTCAGCTTGTTATGGGTCCAAGCCCAGACTCGCAGGGGAGAATCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | CTAGATTATAGGATGATTATTCTAAAACCTGTGGAGGATGCTGTGTCCTACGGTACGACAAAGAGTGTGTaGCATTTCGTGCCACACACC | + |
|
Preference number: 5 (lower is better) Translates to: LDYRMIILKPVEDAVSYGTTKSV*HFVPHT Trigger: GGTGTGTGGCACGAAATGCAACACACTCTTTGTCGT...ACCGTAGGACACAGCATCCTCCACAGGTTTTAGAATAATCATCCTATAATCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | CACACAAAGCACTCGCTACAAACCACACCTTCCTGGACAGACAAATTAGAAAATAACTCCTTGTTCTTGTaGTTGAAGGCTAAAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HTKHSLQTTPSWTDKLENNSLFL*LKAKAR Trigger: GCGGGCTTTAGCCTTCAACAACAAGAACAAGGAGTT...ATTTTCTAATTTGTCTGTCCAGGAAGGTGTGGTTTGTAGCGAGTGCTTTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS-3UTR CAA 90 bp | CACACAAAGCACTCGCTACAAACCACACCTTCCTGGACAGACAAATTAGAAAATCTCTTCCAAAAATCTTaGAGCTCGGATGTCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HTKHSLQTTPSWTDKLENLFQKS*SSDVIE Trigger: TTCTATGACATCCGAGCTCAAAGATTTTTGGAAGAG...ATTTTCTAATTTGTCTGTCCAGGAAGGTGTGGTTTGTAGCGAGTGCTTTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS GCA 72 bp | ATAGTTTCCGTGGAGCCCAGAAGGGAGGGGGCCCCCTaGCACAAAGAGTTTCGTTCCGGACGAGTCGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IVSVEPRREGAP*HKEFRSGRVVA Trigger: TGCTACGACTCGTCCGGAACGAAACTCTTTGTGGCAGGGGGCCCCCTCCCTTCTGGGCTCCACGGAAACTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS TCA 72 bp | GAATCCCACTGCCTCGTTCCCTGGAGCAGACAGACTTaGCGTTGTACGATGGCTGCCGTGGATCCAAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ESHCLVPWSRQT*RCTMAAVDPRR Trigger: CCTTCTTGGATCCACGGCAGCCATCGTACAACGTCAAGTCTGTCTGCTCCAGGGAACGAGGCAGTGGGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 72 bp | CCACTGCCTCGTTCCCTGGAGCAGACAGACTTGACGTaGTACGATGGCTGCCGTGGATCCAAGAAGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: PLPRSLEQTDLT*YDGCRGSKKET Trigger: TGTCTCCTTCTTGGATCCACGGCAGCCATCGTACAACGTCAAGTCTGTCTGCTCCAGGGAACGAGGCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 72 bp | CGAATCCCACTGCCTCGTTCCCTGGAGCAGACAGACTaGACGTTGTACGATGGCTGCCGTGGATCCAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RIPLPRSLEQTD*TLYDGCRGSKK Trigger: CTTCTTGGATCCACGGCAGCCATCGTACAACGTCAAGTCTGTCTGCTCCAGGGAACGAGGCAGTGGGATTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 90 bp | CTCACTGATCGAATCCCACTGCCTCGTTCCCTGGAGCAGACAGACTaGACGTTGTACGATGGCTGCCGTGGATCCAAGAAGGAGACATGC | + |
|
Preference number: 6 (lower is better) Translates to: LTDRIPLPRSLEQTD*TLYDGCRGSKKETC Trigger: GCATGTCTCCTTCTTGGATCCACGGCAGCCATCGTACAACGTCAAGTCTGTCTGCTCCAGGGAACGAGGCAGTGGGATTCGATCAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS TCA 72 bp | GATGGCTGCCGTGGATCCAAGAAGGAGACATGCGCTTaGGAGCCCACTGCATACACTGACCACTCACTACCA | + |
|
Preference number: 6 (lower is better) Translates to: DGCRGSKKETCA*EPTAYTDHSLP Trigger: TGGTAGTGAGTGGTCAGTGTATGCAGTGGGCTCTCAAGCGCATGTCTCCTTCTTGGATCCACGGCAGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CCA 72 bp | TCGTTCCCTGGAGCAGACAGACTTGACGTTGTACGATaGCTGCCGTGGATCCAAGAAGGAGACATGCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFPGADRLDVVR*LPWIQEGDMRL Trigger: CAAGCGCATGTCTCCTTCTTGGATCCACGGCAGCCATCGTACAACGTCAAGTCTGTCTGCTCCAGGGAACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS TCA 72 bp | CTCCCCTGCGAGTCTGGGCTTGGACCCATAACAAGCTaGGAGCCTCTCTTCCAAAAATCTTTGAGCTCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LPCESGLGPITS*EPLFQKSLSSD Trigger: ATCCGAGCTCAAAGATTTTTGGAAGAGAGGCTCTCAGCTTGTTATGGGTCCAAGCCCAGACTCGCAGGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 72 bp | ACACCTCCAGGTTCCCGGTCTTTCAGAATGGGAATCTaGGTGATCTGGCCTGTCTGGACATCCACGACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TPPGSRSFRMGI*VIWPVWTSTTK Trigger: CTTTGTCGTGGATGTCCAGACAGGCCAGATCACCAAGATTCCCATTCTGAAAGACCGGGAACCTGGAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CCA 72 bp | GGTTCCCGGTCTTTCAGAATGGGAATCTTGGTGATCTaGCCTGTCTGGACATCCACGACAAAGAGTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSRSFRMGILVI*PVWTSTTKSVL Trigger: CAACACACTCTTTGTCGTGGATGTCCAGACAGGCCAGATCACCAAGATTCCCATTCTGAAAGACCGGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 72 bp | TCCTTGTTCTTGTTGTTGAAGGCTAAAGCCCGCACCTaGCAGTTGTCCGGGTTTGTATCCTCCTTGGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: SLFLLLKAKART*QLSGFVSSLGI Trigger: TATCCCCAAGGAGGATACAAACCCGGACAACTGCAAGGTGCGGGCTTTAGCCTTCAACAACAAGAACAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS GCA 72 bp | TCTGGACATCCACGACAAAGAGTGTGTTGCATTTCGTaGCACACACCACTTGCCTATGATTCAACCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGHPRQRVCCIS*HTPLAYDSTTE Trigger: CTCAGTGGTTGAATCATAGGCAAGTGGTGTGTGGCACGAAATGCAACACACTCTTTGTCGTGGATGTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 72 bp | GACCCATCCCGTGAGCCAGACACTGCCATAGTATCGTaGATCCACGCAATAGAAAAGATCCAATCCTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: DPSREPDTAIVS*IHAIEKIQSLC Trigger: ACACAAGGATTGGATCTTTTCTATTGCGTGGATCAACGATACTATGGCAGTGTCTGGCTCACGGGATGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 72 bp | TTCTTGTTGTTGAAGGCTAAAGCCCGCACCTTGCAGTaGTCCGGGTTTGTATCCTCCTTGGGGATATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FLLLKAKARTLQ*SGFVSSLGISF Trigger: AAAGGATATCCCCAAGGAGGATACAAACCCGGACAACTGCAAGGTGCGGGCTTTAGCCTTCAACAACAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 90 bp | AGTCCCATAGACCCATCCCGTGAGCCAGACACTGCCATAGTATCGTaGATCCACGCAATAGAAAAGATCCAATCCTTGTGTCCATCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SPIDPSREPDTAIVS*IHAIEKIQSLCPSS Trigger: TGATGATGGACACAAGGATTGGATCTTTTCTATTGCGTGGATCAACGATACTATGGCAGTGTCTGGCTCACGGGATGGGTCTATGGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 90 bp | ACTGCCATAGTATCGTTGATCCACGCAATAGAAAAGATCCAATCCTaGTGTCCATCATCACCCACACACACAGGATCTAAGGTAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TAIVSLIHAIEKIQS*CPSSPTHTGSKVGR Trigger: CCTGCCTACCTTAGATCCTGTGTGTGTGGGTGATGATGGACACAAGGATTGGATCTTTTCTATTGCGTGGATCAACGATACTATGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS TCA 72 bp | TATCCTCCTTGGGGATATCCTTTAAGGCCTTGTGAGTaGTGTGAGCATACACAGGGACTGGTGACACGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: YPPWGYPLRPCE*CEHTQGLVTRY Trigger: ATAACGTGTCACCAGTCCCTGTGTATGCTCACATCACTCACAAGGCCTTAAAGGATATCCCCAAGGAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CCA 72 bp | TCTTTCAGAATGGGAATCTTGGTGATCTGGCCTGTCTaGACATCCACGACAAAGAGTGTGTTGCATTTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFRMGILVIWPV*TSTTKSVLHFV Trigger: CACGAAATGCAACACACTCTTTGTCGTGGATGTCCAGACAGGCCAGATCACCAAGATTCCCATTCTGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 72 bp | TGTGAGCATACACAGGGACTGGTGACACGTTATGTCTaGCATCACTTTTGGTCAACACATCATCTGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: CEHTQGLVTRYV*HHFWSTHHLSP Trigger: AGGTGACAGATGATGTGTTGACCAAAAGTGATGCAAGACATAACGTGTCACCAGTCCCTGTGTATGCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 72 bp | GACAAAGAGTGTGTTGCATTTCGTGCCACACACCACTaGCCTATGATTCAACCACTGAGAAGCAAACACTTT | + |
|
Preference number: 6 (lower is better) Translates to: DKECVAFRATHH*PMIQPLRSKHF Trigger: AAAGTGTTTGCTTCTCAGTGGTTGAATCATAGGCAAGTGGTGTGTGGCACGAAATGCAACACACTCTTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CAA 72 bp | GTATCGTTGATCCACGCAATAGAAAAGATCCAATCCTaGTGTCCATCATCACCCACACACACAGGATCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSLIHAIEKIQS*CPSSPTHTGSK Trigger: CTTAGATCCTGTGTGTGTGGGTGATGATGGACACAAGGATTGGATCTTTTCTATTGCGTGGATCAACGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
||
| CDS CCA 72 bp | ACTACCATAGGCCAGACACACGTTTTCTCGACAATATaGCAATTTGGTGGAAAGGAGCTTAGACAAGGTATT | + |
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Preference number: 6 (lower is better) Translates to: TTIGQTHVFSTI*QFGGKELRQGI Trigger: AATACCTTGTCTAAGCTCCTTTCCACCAAATTGCCATATTGTCGAGAAAACGTGTGTCTGGCCTATGGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030145.9 |
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