RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCAF11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022214

Ensembl transcript IDs: ENSMUST00000072530.11, ENSMUST00000117236.8, ENSMUST00000117701.8, ENSMUST00000121622.8, ENSMUST00000128490.9, ENSMUST00000143375.8, ENSMUST00000150019.8, ENSMUST00000150481.8, ENSMUST00000152681.8

Found 466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCTCCGAAGTCCCAGCCGCCCCGTGGCCAATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCTCCCGGGTGTCGGGGGTCGCATCCA +
Preference number: 1 (lower is better)
Translates to: SSEVPAAPWPIPPVS*SHCIPAPGCRGSHP
Trigger: TGGATGCGACCCCCGACACCCGGGAGCTGGAATACAATGAGATCAAGACACAGGTGGGATTGGCCACGGGGCGGCTGGGACTTCGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 90 bp GCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTaGGCAGTTCCTCCACGTACTCCCCAGAAGGGGAAAGGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: AQPGPRPWVSVSHPV*AVPPRTPQKGKGRR
Trigger: CCTCCTCCCTTTCCCCTTCTGGGGAGTACGTGGAGGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp AAGCAGACTGGGTATGAATGCACGAGGAAACCACTTGGCCCAGTTTaGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTT +
Preference number: 1 (lower is better)
Translates to: KQTGYECTRKPLGPV*GWSVQAQPGPRPWV
Trigger: AACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTGCATTCATACCCAGTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp ACTGGGTATGAATGCACGAGGAAACCACTTGGCCCAGTTTGGGGGTaGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTT +
Preference number: 1 (lower is better)
Translates to: TGYECTRKPLGPVWG*SVQAQPGPRPWVSV
Trigger: AACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTGCATTCATACCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp AGGTACCGGGCATCACCCTTACTGTCAATAAAGGTGATGCCATCCTaGTGCCCGGCCAGTGCACCCACAGGCTTGGGATCATCCTCCCTC +
Preference number: 1 (lower is better)
Translates to: RYRASPLLSIKVMPS*CPASAPTGLGSSSL
Trigger: GAGGGAGGATGATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAGGATGGCATCACCTTTATTGACAGTAAGGGTGATGCCCGGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp AGTAGAGCAGCCACTGTAGATGAACTGCTGGCCGGTGCTGTGGGCTaGGGAGAATCGGCATCGGATCAGAGTGTGAAGCACTCCATGGCC +
Preference number: 1 (lower is better)
Translates to: SRAATVDELLAGAVG*GESASDQSVKHSMA
Trigger: GGCCATGGAGTGCTTCACACTCTGATCCGATGCCGATTCTCCCCAGCCCACAGCACCGGCCAGCAGTTCATCTACAGTGGCTGCTCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 90 bp CTGCTGCCAGCGATAGTCCCAGTTTTGCTGTGTGGCAGCCAGTCGTaGTGCTTCCATGCCTTCTCGGCTGGAAAAGCGCCTGATATCCCA +
Preference number: 1 (lower is better)
Translates to: LLPAIVPVLLCGSQS*CFHAFSAGKAPDIP
Trigger: TGGGATATCAGGCGCTTTTCCAGCCGAGAAGGCATGGAAGCATCACGACTGGCTGCCACACAGCAAAACTGGGACTATCGCTGGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 90 bp ACCCTTACTGTCAATAAAGGTGATGCCATCCTGGTGCCCGGCCAGTaGACCCACAGGCTTGGGATCATCCTCCCTCATGGTTCGTCGATC +
Preference number: 1 (lower is better)
Translates to: TLTVNKGDAILVPGQ*THRLGIILPHGSSI
Trigger: GATCGACGAACCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAGGATGGCATCACCTTTATTGACAGTAAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 90 bp AGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTaGGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCT +
Preference number: 1 (lower is better)
Translates to: SPSMRADIVLTPGGC*GKHLPTHPVHPRRP
Trigger: AGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 90 bp CAGGCTTGGGATCATCCTCCCTCATGGTTCGTCGATCCCACACTTTaGAGATGGCATCGTCTCCCCCAGAGAACAGGATTTGGGAGCTTA +
Preference number: 1 (lower is better)
Translates to: QAWDHPPSWFVDPTL*RWHRLPQRTGFGSL
Trigger: TAAGCTCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGATCGACGAACCATGAGGGAGGATGATCCCAAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp CTGTTCATGTCAGACTCTGGCATGTCATCCTGGAAGTACTCAGCTTaGCGGTACTGCCACAGACGTAGGTTCCCATCCCACGAACTGCTG +
Preference number: 1 (lower is better)
Translates to: LFMSDSGMSSWKYSA*RYCHRRRFPSHELL
Trigger: CAGCAGTTCGTGGGATGGGAACCTACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGAGTCTGACATGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp CACTGGAGTAGGGCCACTGGAACAGACTCTGTTCATGTCAGACTCTaGCATGTCATCCTGGAAGTACTCAGCTTGGCGGTACTGCCACAG +
Preference number: 1 (lower is better)
Translates to: HWSRATGTDSVHVRL*HVILEVLSLAVLPQ
Trigger: CTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGAGTCTGACATGAACAGAGTCTGTTCCAGTGGCCCTACTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 90 bp ACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATaGCCTGCCACACTCTGGCTAGAGATCGAAATCCAAGCAGACTGG +
Preference number: 1 (lower is better)
Translates to: TLKTLVARSGTPDNG*PATLWLEIEIQADW
Trigger: CCAGTCTGCTTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp CCTCTTTTGTTGAAGCTGCTGGCCACCAGCAATGATAGGATCCAATaGCGAGTTGGGCCGTATCTGAGACCCATACCTCTCAGACCAGTC +
Preference number: 1 (lower is better)
Translates to: PLLLKLLATSNDRIQ*RVGPYLRPIPLRPV
Trigger: GACTGGTCTGAGAGGTATGGGTCTCAGATACGGCCCAACTCGCCATTGGATCCTATCATTGCTGGTGGCCAGCAGCTTCAACAAAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp CATTGGCTCCTCCTAGTACTTCTCGTCCATCTGAGGAGACTGCGATaGAGAAGACAGCAAAGCGACGCTCATCTGGCCTTAAATCCAGGG +
Preference number: 1 (lower is better)
Translates to: HWLLLVLLVHLRRLR*RRQQSDAHLALNPG
Trigger: CCCTGGATTTAAGGCCAGATGAGCGTCGCTTTGCTGTCTTCTCCATCGCAGTCTCCTCAGATGGACGAGAAGTACTAGGAGGAGCCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp TGGGATCATCCTCCCTCATGGTTCGTCGATCCCACACTTTGCAGATaGCATCGTCTCCCCCAGAGAACAGGATTTGGGAGCTTATGTCAG +
Preference number: 1 (lower is better)
Translates to: WDHPPSWFVDPTLCR*HRLPQRTGFGSLCQ
Trigger: CTGACATAAGCTCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGATCGACGAACCATGAGGGAGGATGATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp CCACTGGAACAGACTCTGTTCATGTCAGACTCTGGCATGTCATCCTaGAAGTACTCAGCTTGGCGGTACTGCCACAGACGTAGGTTCCCA +
Preference number: 1 (lower is better)
Translates to: PLEQTLFMSDSGMSS*KYSAWRYCHRRRFP
Trigger: TGGGAACCTACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGAGTCTGACATGAACAGAGTCTGTTCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 90 bp TCCCCCAGAGAACAGGATTTGGGAGCTTATGTCAGCAAAGGCCACTaGATTCACATCGTCCTCATGAGACTCGATCTGAAGAGTACGCCG +
Preference number: 1 (lower is better)
Translates to: SPREQDLGAYVSKGH*IHIVLMRLDLKSTP
Trigger: CGGCGTACTCTTCAGATCGAGTCTCATGAGGACGATGTGAATGCAGTGGCCTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 90 bp TCAGACTCTGGCATGTCATCCTGGAAGTACTCAGCTTGGCGGTACTaGCACAGACGTAGGTTCCCATCCCACGAACTGCTGACAATCTTT +
Preference number: 1 (lower is better)
Translates to: SDSGMSSWKYSAWRY*HRRRFPSHELLTIF
Trigger: AAAGATTGTCAGCAGTTCGTGGGATGGGAACCTACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGAGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 90 bp TCCCACACTTTGCAGATGGCATCGTCTCCCCCAGAGAACAGGATTTaGGAGCTTATGTCAGCAAAGGCCACTGCATTCACATCGTCCTCA +
Preference number: 1 (lower is better)
Translates to: SHTLQMASSPPENRI*ELMSAKATAFTSSS
Trigger: TGAGGACGATGTGAATGCAGTGGCCTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 90 bp AGCGACAGTCGTACAGTCGGATCGTCTGATCTTGGCAAGCAGACATaGAGATTTGACCATCTTTGCTGTAGATGCCGCAGAAAGCCTTCT +
Preference number: 1 (lower is better)
Translates to: SDSRTVGSSDLGKQT*RFDHLCCRCRRKPS
Trigger: AGAAGGCTTTCTGCGGCATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGACTGTACGACTGTCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 90 bp TTTTCTTCAAAGGGATGCCAACTGACATCACGCACACAGGCCTTGTaGTTGGTCAGCTTCTTAACAATGTGGCCGCTCAAGAGGTCATAT +
Preference number: 1 (lower is better)
Translates to: FSSKGCQLTSRTQAL*LVSFLTMWPLKRSY
Trigger: ATATGACCTCTTGAGCGGCCACATTGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 90 bp CTTTGCTGTAGATGCCGCAGAAAGCCTTCTGAGAGTAGGTATCAGTaGAGCTTAGATCATTGGGCAAGAAGTGAGACATCACTCGAGACT +
Preference number: 1 (lower is better)
Translates to: LCCRCRRKPSESRYQ*SLDHWARSETSLET
Trigger: AGTCTCGAGTGATGTCTCACTTCTTGCCCAATGATCTAAGCTTCACTGATACCTACTCTCAGAAGGCTTTCTGCGGCATCTACAGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 90 bp GACCTCAAGTGTCTACACTATGAGCCAATATCTAACATCAGAACATaGTTAAACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCA +
Preference number: 1 (lower is better)
Translates to: DLKCLHYEPISNIRT*LNTLKTLVARSGTP
Trigger: TGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTTTAATCATGTTCTGATGTTAGATATTGGCTCATAGTGTAGACACTTGAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CAA 90 bp AGTCCCAGCCGCCCCGTGGCCAATCCCACCTGTGTCTTGATCTCATaGTATTCCAGCTCCCGGGTGTCGGGGGTCGCATCCACGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SPSRPVANPTCVLIS*YSSSRVSGVASTGG
Trigger: CCCACCCGTGGATGCGACCCCCGACACCCGGGAGCTGGAATACAATGAGATCAAGACACAGGTGGGATTGGCCACGGGGCGGCTGGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCCCTGGGCCCAGACCCTaGGTTTCTGTTTCTCACCCA +
Preference number: 2 (lower is better)
Translates to: PSLGVVSPGSAWAQTLGFPGPRP*VSVSHP
Trigger: TGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGG...GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp AGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTGGCCCAGTTTGGGGGTaGTCAGTCCAGGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: SLGVVSPGSAWAQTLGFCGPVWG*SVQAQP
Trigger: AGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCC...ACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCCTGGTGCCCGGCCAGTaGACCCACAGGCTTGGGATC +
Preference number: 2 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSLVPGQ*THRLGI
Trigger: GATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAG...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CAGGAGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACAGTCCAGGCTCAGCCTaGGCCCAGACCCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: QEVAEANTSLPILSTLEDSPGSA*AQTLGF
Trigger: GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACT...GTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp AGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTCACGAGGAAACCACTTaGCCCAGTTTGGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: SLGVVSPGSAWAQTLGFCHEETT*PSLGVV
Trigger: GACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTG...ACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp GGCTTGGGATCATCCTCCCTCATGGTTCGTCGATCCCACACTTTGCAGATGGCACTGGTGCCCGGCCAGTaGACCCACAGGCTTGGGATC +
Preference number: 2 (lower is better)
Translates to: GLGSSSLMVRRSHTLQMALVPGQ*THRLGI
Trigger: GATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAG...TGCCATCTGCAAAGTGTGGGATCGACGAACCATGAGGGAGGATGATCCCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAGTCCAGGCTCAGCCTaGGCCCAGACCCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: AEANTSLPILSTLEDLRKSPGSA*AQTLGF
Trigger: GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACT...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GCTGCCAGCGATAGTCCCAGTTTTGCTGTGTGGCAGCCAGTCGTGATGCTTCCAAGTCCAGGCTCAGCCTaGGCCCAGACCCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: AASDSPSFAVWQPVVMLPSPGSA*AQTLGF
Trigger: GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACT...TGGAAGCATCACGACTGGCTGCCACACAGCAAAACTGGGACTATCGCTGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGAGGCCCCGTTCTCTCTaGTGTAACATCTGCGGAAAA +
Preference number: 2 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLRPRSL*CNICGK
Trigger: TTTTCCGCAGATGTTACACCAGAGAGAACGGGGCCT...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp AGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGGTTTCCATCAGGGGTaGAGGCCACGTCCAGGACAC +
Preference number: 2 (lower is better)
Translates to: RLLRQTPPYPSCPPSKTSGFHQG*RPRPGH
Trigger: GTGTCCTGGACGTGGCCTTCACCCCTGATGGAAACC...TGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp AGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTACCCCAGATAATGGATaGCCTGCCACACTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: SLGVVSPGSAWAQTLGFCTPDNG*PATLWL
Trigger: TAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGT...ACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CAGAGTGTGAAGCACTCCATGGCCTCTGTAGGTCATCAAGGAGCTGTCACCTGGAGTCCAGGCTCAGCCTaGGCCCAGACCCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: QSVKHSMASVGHQGAVTWSPGSA*AQTLGF
Trigger: GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACT...CCAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCACACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CAGAGTGTGAAGCACTCCATGGCCTCTGTAGGTCATCAAGGAGCTGTCACCTGGGGCCCAGTTTGGGGGTaGTCAGTCCAGGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: QSVKHSMASVGHQGAVTWGPVWG*SVQAQP
Trigger: AGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCC...CCAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCACACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CTGGCATGTCATCCTGGAAGTACTCAGCTTGGCGGTACTGCCACAGACGTAGGTGGCCCAGTTTGGGGGTaGTCAGTCCAGGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: LACHPGSTQLGGTATDVGGPVWG*SVQAQP
Trigger: AGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCC...ACCTACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTAGTCAGACCAGCTaGAGTACAGGAAGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: PSLGVVSPGSAWAQTLGFCSQTS*STGSGF
Trigger: GAAACCACTTCCTGTACTCCAGCTGGTCTGACTACA...GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GAGGAAAAGGCCACAGATGGGCAGGGCACTGGAGTAGGGCCACTGGAACAGACTGTGCACCCACAGGCTTaGGATCATCCTCCCTCATGG +
Preference number: 2 (lower is better)
Translates to: EEKATDGQGTGVGPLEQTVHPQA*DHPPSW
Trigger: CCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCAC...AGTCTGTTCCAGTGGCCCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCGGAAAAGGCCACAGATaGGCAGGGCACTGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSGKGHR*AGHWSR
Trigger: CCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCC...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CAA 90 bp ATAAAGGTGATGCCATCCTGGTGCCCGGCCAGTGCACCCACAGGCTaGGGATCATCCTCCCTCATGGTTCGTCGATCCCACACTTTGCAG +
Preference number: 2 (lower is better)
Translates to: IKVMPSWCPASAPTG*GSSSLMVRRSHTLQ
Trigger: CTGCAAAGTGTGGGATCGACGAACCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAGGATGGCATCACCTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp GAGGAAAAGGCCACAGATGGGCAGGGCACTGGAGTAGGGCCACTGGAACAGACTCATCGGATCAGAGTGTaGAGCACTCCATGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: EEKATDGQGTGVGPLEQTHRIRV*STPWPL
Trigger: CAGAGGCCATGGAGTGCTTCACACTCTGATCCGATG...AGTCTGTTCCAGTGGCCCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCCATCGGATCAGAGTGTaGAGCACTCCATGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSHRIRV*STPWPL
Trigger: CAGAGGCCATGGAGTGCTTCACACTCTGATCCGATG...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp GAGGAAAAGGCCACAGATGGGCAGGGCACTGGAGTAGGGCCACTGGAACAGACTCAAAGGGATGCCAACTaGCATCACGCACACAGGCCT +
Preference number: 2 (lower is better)
Translates to: EEKATDGQGTGVGPLEQTQRDAN*HHAHRP
Trigger: AGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTG...AGTCTGTTCCAGTGGCCCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp CAGATGGCATCGTCTCCCCCAGAGAACAGGATTTGGGAGCTTATGTCAGCAAAGCTGGTGCCCGGCCAGTaGACCCACAGGCTTGGGATC +
Preference number: 2 (lower is better)
Translates to: QMASSPPENRIWELMSAKLVPGQ*THRLGI
Trigger: GATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAG...CTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp AGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCACCTGGGCCCAGACCCTaGGTTTCTGTTTCTCACCCA +
Preference number: 2 (lower is better)
Translates to: RLLRQTPPYPSCPPSKTSPGPRP*VSVSHP
Trigger: TGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGG...TGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTAGTCCAGGCTCAGCCTaGGCCCAGACCCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGSPGSA*AQTLGF
Trigger: GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACT...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTAGTCCAGGCTCAGCCTaGGCCCAGACCCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: LALMATNLTLSVKTWAKGSPGSA*AQTLGF
Trigger: GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACT...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGGGCCCAGTTTGGGGGTaGTCAGTCCAGGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: SCPPSKTSERKVSVYLALGPVWG*SVQAQP
Trigger: AGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCC...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGACACGAGGAAACCACTTaGCCCAGTTTGGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: LRQTPPYPSCPPSKTSERHEETT*PSLGVV
Trigger: GACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTG...TCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp GAGGAAAAGGCCACAGATGGGCAGGGCACTGGAGTAGGGCCACTGGAACAGACTTACTTCTCGTCCATCTaGGGAGACTGCGATGGAGAA +
Preference number: 2 (lower is better)
Translates to: EEKATDGQGTGVGPLEQTYFSSI*GDCDGE
Trigger: TTCTCCATCGCAGTCTCCTCAGATGGACGAGAAGTA...AGTCTGTTCCAGTGGCCCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTCATCTTTGCTGTAGATaGCGCAGAAAGCCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSHLCCR*RRKPSE
Trigger: CTCAGAAGGCTTTCTGCGGCATCTACAGCAAAGATG...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTCCTGGGCCCAGACCCTaGGTTTCTGTTTCTCACCCA +
Preference number: 2 (lower is better)
Translates to: LALMATNLTLSVKTWAKGPGPRP*VSVSHP
Trigger: TGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGG...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCGGCCCAGTTTGGGGGTaGTCAGTCCAGGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSGPVWG*SVQAQP
Trigger: AGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCC...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCAACACGAGGAAACCACTTaGCCCAGTTTGGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: GTPDNGCPATLWLEIEIQHEETT*PSLGVV
Trigger: GACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTG...TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GTGAAGCACTCCATGGCCTCTGTAGGTCATCAAGGAGCTGTCACCTGGGAGCTTCCCACACTTTGCAGATaGCATCGTCTCCCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: VKHSMASVGHQGAVTWELPTLCR*HRLPQR
Trigger: TCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGG...AAGCTCCCAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp TCAGAGTGTGAAGCACTCCATGGCCTCTGTAGGTCATCAAGGAGCTGTCACCTGGTGCACCCACAGGCTTaGGATCATCCTCCCTCATGG +
Preference number: 2 (lower is better)
Translates to: SECEALHGLCRSSRSCHLVHPQA*DHPPSW
Trigger: CCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCAC...CAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCACACTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CAA 90 bp ACAGGCTTGGGATCATCCTCCCTCATGGTTCGTCGATCCCACACTTaGCAGATGGCATCGTCTCCCCCAGAGAACAGGATTTGGGAGCTT +
Preference number: 2 (lower is better)
Translates to: TGLGSSSLMVRRSHT*QMASSPPENRIWEL
Trigger: AAGCTCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGATCGACGAACCATGAGGGAGGATGATCCCAAGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp AGCGGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCGAGAGCCACAGCCAGTaGGAAGGTGAAAGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: SGTPDNGCPATLWLEIEIESHSQ*EGERSP
Trigger: AGGACTTCTTTCACCTTCTCACTGGCTGTGGCTCTC...GATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCGGTTTCCATCAGGGGTaGAGGCCACGTCCAGGACAC +
Preference number: 2 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSGFHQG*RPRPGH
Trigger: GTGTCCTGGACGTGGCCTTCACCCCTGATGGAAACC...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp TACAACCACTTTGCCAGTAGAGCAGCCACTGTAGATGAACTGCTGGCCGGTGCTCATCGGATCAGAGTGTaGAGCACTCCATGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: YNHFASRAATVDELLAGAHRIRV*STPWPL
Trigger: CAGAGGCCATGGAGTGCTTCACACTCTGATCCGATG...AGCACCGGCCAGCAGTTCATCTACAGTGGCTGCTCTACTGGCAAAGTGGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp GGCTTGGGATCATCCTCCCTCATGGTTCGTCGATCCCACACTTTGCAGATGGCAACCCCAGATAATGGATaGCCTGCCACACTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: GLGSSSLMVRRSHTLQMATPDNG*PATLWL
Trigger: TAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGT...TGCCATCTGCAAAGTGTGGGATCGACGAACCATGAGGGAGGATGATCCCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCTGGGCCCAGACCCTaGGTTTCTGTTTCTCACCCA +
Preference number: 2 (lower is better)
Translates to: THPVHPRRPQKERSRYTWPGPRP*VSVSHP
Trigger: TGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGG...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGTCCAGGCTCAGCCTaGGCCCAGACCCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLSPGSA*AQTLGF
Trigger: GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACT...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CGATGGAGAAGACAGCAAAGCGACGCTCATCTGGCCTTAAATCCAGGGCAGTATCACGAGGAAACCACTTaGCCCAGTTTGGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: RWRRQQSDAHLALNPGQYHEETT*PSLGVV
Trigger: GACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTG...ATACTGCCCTGGATTTAAGGCCAGATGAGCGTCGCTTTGCTGTCTTCTCCATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCACGAGGAAACCACTTaGCCCAGTTTGGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: THPVHPRRPQKERSRYTWHEETT*PSLGVV
Trigger: GACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTG...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTACTGAGGAGACTGCGATaGAGAAGACAGCAAAGCGAC +
Preference number: 2 (lower is better)
Translates to: PPYPSCPPSKTSERKVSVLRRLR*RRQQSD
Trigger: GTCGCTTTGCTGTCTTCTCCATCGCAGTCTCCTCAG...TACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGGATCATCCTCCCTCATaGTTCGTCGATCCCACACTT +
Preference number: 2 (lower is better)
Translates to: AEANTSLPILSTLEDLRKDHPPS*FVDPTL
Trigger: AAGTGTGGGATCGACGAACCATGAGGGAGGATGATC...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CAA 90 bp TCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTaGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAG +
Preference number: 2 (lower is better)
Translates to: SKSKYESRHSSHPRR*LRQTPPYPSCPPSK
Trigger: CTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGGGTTTCCATCAGGGGTaGAGGCCACGTCCAGGACAC +
Preference number: 2 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLGFHQG*RPRPGH
Trigger: GTGTCCTGGACGTGGCCTTCACCCCTGATGGAAACC...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCTGTGGCAGCCAGTCGTaGTGCTTCCATGCCTTCTCG +
Preference number: 2 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSCGSQS*CFHAFS
Trigger: CGAGAAGGCATGGAAGCATCACGACTGGCTGCCACA...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp CTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGACGCACACAGGCCTTGTaGTTGGTCAGCTTCTTAACA +
Preference number: 2 (lower is better)
Translates to: LRQTPPYPSCPPSKTSERRTQAL*LVSFLT
Trigger: TGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCG...TCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp AAGCGACGCTCATCTGGCCTTAAATCCAGGGCAGTATGTGTGTCTCCTTCCCCAACCCCAGATAATGGATaGCCTGCCACACTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: KRRSSGLKSRAVCVSPSPTPDNG*PATLWL
Trigger: TAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGT...TGGGGAAGGAGACACACATACTGCCCTGGATTTAAGGCCAGATGAGCGTCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp GTGAAGCACTCCATGGCCTCTGTAGGTCATCAAGGAGCTGTCACCTGGGAGCTTGTCAGCAAAGGCCACTaGATTCACATCGTCCTCATG +
Preference number: 2 (lower is better)
Translates to: VKHSMASVGHQGAVTWELVSKGH*IHIVLM
Trigger: CATGAGGACGATGTGAATGCAGTGGCCTTTGCTGAC...AAGCTCCCAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGGTGATGCCATCCTGGTaGCCGGCCAGTGCACCCACA +
Preference number: 2 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLVMPSW*PASAPT
Trigger: TGTGGGTGCACTGGCCGGGCACCAGGATGGCATCAC...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGGGCCCAGTTTGGGGGTaGTCAGTCCAGGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLGPVWG*SVQAQP
Trigger: AGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCC...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGATGCCCTGCCACACTCTaGCTAGAGATCGAAATCCAA +
Preference number: 2 (lower is better)
Translates to: LRQTPPYPSCPPSKTSERCPATL*LEIEIQ
Trigger: TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCA...TCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GGCTTGGGATCATCCTCCCTCATGGTTCGTCGATCCCACACTTTGCAGATGGCACTGGAGTACAGGAAGTaGTTTCCATCAGGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: GLGSSSLMVRRSHTLQMALEYRK*FPSGVK
Trigger: CTTCACCCCTGATGGAAACCACTTCCTGTACTCCAG...TGCCATCTGCAAAGTGTGGGATCGACGAACCATGAGGGAGGATGATCCCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp TTGTTGAAGCTGCTGGCCACCAGCAATGATAGGATCCAATGGCGAGTTGGGCCGCTGGAGTACAGGAAGTaGTTTCCATCAGGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: LLKLLATSNDRIQWRVGPLEYRK*FPSGVK
Trigger: CTTCACCCCTGATGGAAACCACTTCCTGTACTCCAG...CGGCCCAACTCGCCATTGGATCCTATCATTGCTGGTGGCCAGCAGCTTCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp AGCGGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCTGGAGTACAGGAAGTaGTTTCCATCAGGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: SGTPDNGCPATLWLEIEILEYRK*FPSGVK
Trigger: CTTCACCCCTGATGGAAACCACTTCCTGTACTCCAG...GATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CACTGCATTCACATCGTCCTCATGAGACTCGATCTGAAGAGTACGCCGGTTTTGGTGCACCCACAGGCTTaGGATCATCCTCCCTCATGG +
Preference number: 2 (lower is better)
Translates to: HCIHIVLMRLDLKSTPVLVHPQA*DHPPSW
Trigger: CCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCAC...CAAAACCGGCGTACTCTTCAGATCGAGTCTCATGAGGACGATGTGAATGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp AGCGGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCAAGGAGCTGTCACCTaGGAGCTTCAACTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: SGTPDNGCPATLWLEIEIQGAVT*ELQLLP
Trigger: TGGAAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTG...GATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp GAGGAAAAGGCCACAGATGGGCAGGGCACTGGAGTAGGGCCACTGGAACAGACTCAAAGCTTAATGGTCTaGTCTTTGGAGTTGGAGATG +
Preference number: 2 (lower is better)
Translates to: EEKATDGQGTGVGPLEQTQSLMV*SLELEM
Trigger: CATCTCCAACTCCAAAGATCAGACCATTAAGCTTTG...AGTCTGTTCCAGTGGCCCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGCAGACTGGGTATGAATaGACGAGGAAACCACTTGGC +
Preference number: 2 (lower is better)
Translates to: SCPPSKTSERKVSVYLALQTGYE*TRKPLG
Trigger: GCCAAGTGGTTTCCTCGTGCATTCATACCCAGTCTG...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGACCCCAGATAATGGATaGCCTGCCACACTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: THPVHPRRPQKERSRYTWTPDNG*PATLWL
Trigger: TAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGT...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTACCCCAGATAATGGATaGCCTGCCACACTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPTPDNG*PATLWL
Trigger: TAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGT...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAAGTCCAGGCTCAGCCTaGGCCCAGACCCTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRSPGSA*AQTLGF
Trigger: GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACT...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp ACAGGCCTTGTGATTGGTCAGCTTCTTAACAATGTGGCCGCTCAAGAGGTCATACACGAGGAAACCACTTaGCCCAGTTTGGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: TGLVIGQLLNNVAAQEVIHEETT*PSLGVV
Trigger: GACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTG...TATGACCTCTTGAGCGGCCACATTGTTAAGAAGCTGACCAATCACAAGGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTTGCCCTGCCACACTCTaGCTAGAGATCGAAATCCAA +
Preference number: 2 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGCPATL*LEIEIQ
Trigger: TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCA...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTCTGAGGAGACTGCGATaGAGAAGACAGCAAAGCGAC +
Preference number: 2 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPLRRLR*RRQQSD
Trigger: GTCGCTTTGCTGTCTTCTCCATCGCAGTCTCCTCAG...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GTGGCCGCTCAAGAGGTCATATACAACCACTTTGCCAGTAGAGCAGCCACTGTATGGAAGTACTCAGCTTaGCGGTACTGCCACAGACGT +
Preference number: 2 (lower is better)
Translates to: VAAQEVIYNHFASRAATVWKYSA*RYCHRR
Trigger: ACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCA...TACAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGACCTCTTGAGCGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGTACTTCTCGTCCATCTaGGGAGACTGCGATGGAGAA +
Preference number: 2 (lower is better)
Translates to: THPVHPRRPQKERSRYTWYFSSI*GDCDGE
Trigger: TTCTCCATCGCAGTCTCCTCAGATGGACGAGAAGTA...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp GCTGCCAGCGATAGTCCCAGTTTTGCTGTGTGGCAGCCAGTCGTGATGCTTCCACAAAGCTTAATGGTCTaGTCTTTGGAGTTGGAGATG +
Preference number: 2 (lower is better)
Translates to: AASDSPSFAVWQPVVMLPQSLMV*SLELEM
Trigger: CATCTCCAACTCCAAAGATCAGACCATTAAGCTTTG...TGGAAGCATCACGACTGGCTGCCACACAGCAAAACTGGGACTATCGCTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCAGACTGGGTATGAATaGACGAGGAAACCACTTGGC +
Preference number: 2 (lower is better)
Translates to: THPVHPRRPQKERSRYTWQTGYE*TRKPLG
Trigger: GCCAAGTGGTTTCCTCGTGCATTCATACCCAGTCTG...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCACGAGGAAACCACTTaGCCCAGTTTGGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLHEETT*PSLGVV
Trigger: GACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTG...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp AAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTTGCCCTGCCACACTCTaGCTAGAGATCGAAATCCAA +
Preference number: 2 (lower is better)
Translates to: KHLPTHPVHPRRPQKERSCPATL*LEIEIQ
Trigger: TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCA...AGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CATTGGCTCCTCCTAGTACTTCTCGTCCATCTGAGGAGACTGCGATGGAGAAGATGCCCTGCCACACTCTaGCTAGAGATCGAAATCCAA +
Preference number: 2 (lower is better)
Translates to: HWLLLVLLVHLRRLRWRRCPATL*LEIEIQ
Trigger: TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCA...TCTTCTCCATCGCAGTCTCCTCAGATGGACGAGAAGTACTAGGAGGAGCCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CAA 90 bp GTGGAATCGGCCATAGCGACAGTCGTACAGTCGGATCGTCTGATCTaGGCAAGCAGACATGAAGATTTGACCATCTTTGCTGTAGATGCC +
Preference number: 2 (lower is better)
Translates to: VESAIATVVQSDRLI*ASRHEDLTIFAVDA
Trigger: GGCATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGACTGTACGACTGTCGCTATGGCCGATTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCCAGACTGGGTATGAATaGACGAGGAAACCACTTGGC +
Preference number: 2 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSQTGYE*TRKPLG
Trigger: GCCAAGTGGTTTCCTCGTGCATTCATACCCAGTCTG...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp CTTTGCAGATGGCATCGTCTCCCCCAGAGAACAGGATTTGGGAGCTTATGTCAGCATCTTTGCTGTAGATaGCGCAGAAAGCCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: LCRWHRLPQRTGFGSLCQHLCCR*RRKPSE
Trigger: CTCAGAAGGCTTTCTGCGGCATCTACAGCAAAGATG...CTGACATAAGCTCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGGTCGATCCCACACTTTaGAGATGGCATCGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLVDPTL*RWHRLP
Trigger: GGGGAGACGATGCCATCTGCAAAGTGTGGGATCGAC...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCCCTGGGCCCAGACCCTaGGTTTCTGTTTCTCACCCA +
Preference number: 2 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPPGPRP*VSVSHP
Trigger: TGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGG...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAATGCCCTGCCACACTCTaGCTAGAGATCGAAATCCAA +
Preference number: 2 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQCPATL*LEIEIQ
Trigger: TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCA...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCCAGAGAACAGGATTTaGGAGCTTATGTCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGPENRI*ELMSAK
Trigger: CTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGG...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAATTTATCCTCTTTTGTTaGAGCTGCTGGCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQFILFC*SCWPPA
Trigger: TGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAA...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTCATCCCACGAACTGCTaGCAATCTTTTCTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPHPTNC*QSFLQR
Trigger: CCTTTGAAGAAAAGATTGTCAGCAGTTCGTGGGATG...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp GTGGCCGCTCAAGAGGTCATATACAACCACTTTGCCAGTAGAGCAGCCACTGTACATCCCACGAACTGCTaGCAATCTTTTCTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: VAAQEVIYNHFASRAATVHPTNC*QSFLQR
Trigger: CCTTTGAAGAAAAGATTGTCAGCAGTTCGTGGGATG...TACAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGACCTCTTGAGCGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp AGCTTAGATCATTGGGCAAGAAGTGAGACATCACTCGAGACTGTTCTCCAAGGGCAGACTGGGTATGAATaGACGAGGAAACCACTTGGC +
Preference number: 2 (lower is better)
Translates to: SLDHWARSETSLETVLQGQTGYE*TRKPLG
Trigger: GCCAAGTGGTTTCCTCGTGCATTCATACCCAGTCTG...CCCTTGGAGAACAGTCTCGAGTGATGTCTCACTTCTTGCCCAATGATCTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp CCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACACCCCAGATAATGGATaGCCTGCCACACTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: PIPLRPVFSLQSPSMRADTPDNG*PATLWL
Trigger: TAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGT...GTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp GCTCAAGAGGTCATATACAACCACTTTGCCAGTAGAGCAGCCACTGTAGATGAAGTCGTGATGCTTCCATaGCTTCTCGGCTGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: AQEVIYNHFASRAATVDEVVMLP*LLGWKS
Trigger: GCTTTTCCAGCCGAGAAGGCATGGAAGCATCACGAC...TTCATCTACAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGACCTCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGTGGAAGTACTCAGCTTaGCGGTACTGCCACAGACGT +
Preference number: 2 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLWKYSA*RYCHRR
Trigger: ACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCA...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CAA 90 bp GTCGTACAGTCGGATCGTCTGATCTTGGCAAGCAGACATGAAGATTaGACCATCTTTGCTGTAGATGCCGCAGAAAGCCTTCTGAGAGTA +
Preference number: 2 (lower is better)
Translates to: VVQSDRLILASRHED*TIFAVDAAESLLRV
Trigger: TACTCTCAGAAGGCTTTCTGCGGCATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGACTGTACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAACAGCCAGTGAGAAGGTaGAAGAAGTCCTGTTTTATC +
Preference number: 2 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQQPVRR*KKSCFI
Trigger: GATAAAACAGGACTTCTTTCACCTTCTCACTGGCTG...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCCAGCCAGTGAGAAGGTaGAAGAAGTCCTGTTTTATC +
Preference number: 2 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSQPVRR*KKSCFI
Trigger: GATAAAACAGGACTTCTTTCACCTTCTCACTGGCTG...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp CACTGCATTCACATCGTCCTCATGAGACTCGATCTGAAGAGTACGCCGGTTTTGCTTGGCAAGCAGACATaGAGATTTGACCATCTTTGC +
Preference number: 2 (lower is better)
Translates to: HCIHIVLMRLDLKSTPVLLGKQT*RFDHLC
Trigger: GCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAG...CAAAACCGGCGTACTCTTCAGATCGAGTCTCATGAGGACGATGTGAATGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCAGACTGGGTATGAATaGACGAGGAAACCACTTGGC +
Preference number: 2 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLQTGYE*TRKPLG
Trigger: GCCAAGTGGTTTCCTCGTGCATTCATACCCAGTCTG...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp TACAACCACTTTGCCAGTAGAGCAGCCACTGTAGATGAACTGCTGGCCGGTGCTCTTCCCCATAGATGTTaGAGATATGAATGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: YNHFASRAATVDELLAGALPHRC*RYECSQ
Trigger: CTGACTACATTCATATCTGCAACATCTATGGGGAAG...AGCACCGGCCAGCAGTTCATCTACAGTGGCTGCTCTACTGGCAAAGTGGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTCTGGTGTAACATCTaGGGAAAACTCTGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLLWCNI*GKLCCS
Trigger: GCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGAG...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CCAACTGACATCACGCACACAGGCCTTGTGATTGGTCAGCTTCTTAACAATGTGTGTAGTCAGACCAGCTaGAGTACAGGAAGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: PTDITHTGLVIGQLLNNVCSQTS*STGSGF
Trigger: GAAACCACTTCCTGTACTCCAGCTGGTCTGACTACA...CACATTGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCGTGATGTCAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp GCTCAAGAGGTCATATACAACCACTTTGCCAGTAGAGCAGCCACTGTAGATGAATTTATCCTCTTTTGTTaGAGCTGCTGGCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: AQEVIYNHFASRAATVDEFILFC*SCWPPA
Trigger: TGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAA...TTCATCTACAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGACCTCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCTACTTCTCGTCCATCTaGGGAGACTGCGATGGAGAA +
Preference number: 2 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPYFSSI*GDCDGE
Trigger: TTCTCCATCGCAGTCTCCTCAGATGGACGAGAAGTA...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLIPPVS*SHCIPA
Trigger: AGCTGGAATACAATGAGATCAAGACACAGGTGGGAT...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACACCCCAGATAATGGATaGCCTGCCACACTCTGGCTA +
Preference number: 2 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHTPDNG*PATLWL
Trigger: TAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGT...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCATCTTTGCTGTAGATaGCGCAGAAAGCCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLHLCCR*RRKPSE
Trigger: CTCAGAAGGCTTTCTGCGGCATCTACAGCAAAGATG...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp TTGGTCAGCTTCTTAACAATGTGGCCGCTCAAGAGGTCATATACAACCACTTTGGTCAGCAAAGGCCACTaGATTCACATCGTCCTCATG +
Preference number: 2 (lower is better)
Translates to: LVSFLTMWPLKRSYTTTLVSKGH*IHIVLM
Trigger: CATGAGGACGATGTGAATGCAGTGGCCTTTGCTGAC...CAAAGTGGTTGTATATGACCTCTTGAGCGGCCACATTGTTAAGAAGCTGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp TTCCCCATAGATGTTGCAGATATGAATGTAGTCAGACCAGCTGGAGTACAGGAACTTGGCAAGCAGACATaGAGATTTGACCATCTTTGC +
Preference number: 2 (lower is better)
Translates to: FPIDVADMNVVRPAGVQELGKQT*RFDHLC
Trigger: GCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAG...TTCCTGTACTCCAGCTGGTCTGACTACATTCATATCTGCAACATCTATGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGACCAGAGAACAGGATTTaGGAGCTTATGTCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRPENRI*ELMSAK
Trigger: CTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGG...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR TCA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHIPPVS*SHCIPA
Trigger: AGCTGGAATACAATGAGATCAAGACACAGGTGGGAT...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR GCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGACTTCCCCATAGATGTTaGAGATATGAATGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRLPHRC*RYECSQ
Trigger: CTGACTACATTCATATCTGCAACATCTATGGGGAAG...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 72 bp GTCCCAGCCGCCCCGTGGCCAATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCTCCCGGGTGTCGGGGG +
Preference number: 3 (lower is better)
Translates to: VPAAPWPIPPVS*SHCIPAPGCRG
Trigger: CCCCCGACACCCGGGAGCTGGAATACAATGAGATCAAGACACAGGTGGGATTGGCCACGGGGCGGCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 72 bp TGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTaGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGT +
Preference number: 3 (lower is better)
Translates to: WPSLGVVSPGSA*AQTLGFCFSPS
Trigger: ACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 72 bp TGCCATCCTGGTGCCCGGCCAGTGCACCCACAGGCTTaGGATCATCCTCCCTCATGGTTCGTCGATCCCACA +
Preference number: 3 (lower is better)
Translates to: CHPGARPVHPQA*DHPPSWFVDPT
Trigger: TGTGGGATCGACGAACCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAGGATGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 72 bp CGTTCTCTCTGGTGTAACATCTGCGGAAAACTCTGCTaGAGCGCAGTCCTCCGAAGTCCCAGCCGCCCCGTG +
Preference number: 3 (lower is better)
Translates to: RSLWCNICGKLC*SAVLRSPSRPV
Trigger: CACGGGGCGGCTGGGACTTCGGAGGACTGCGCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGAGAGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 72 bp CGGTGGCAGAGGCCCCGTTCTCTCTGGTGTAACATCTaGGGAAAACTCTGCTGCAGCGCAGTCCTCCGAAGT +
Preference number: 3 (lower is better)
Translates to: RWQRPRSLWCNI*GKLCCSAVLRS
Trigger: ACTTCGGAGGACTGCGCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGAGAGAACGGGGCCTCTGCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTACCACTTGGCCCAGTTaGGGGGTGGTCAGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGTTWPS*GVVSPG
Trigger: GCCTGGACTGACCACCCCCAAACTGGGCCAAGTGGT...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CTGGCATGTCATCCTGGAAGTACTCAGCTTGGCGGTACTGCCACAGACGTAGGTTCTCACCCCAGGAGGTaGCTGAGGCAAACACCTCCC +
Preference number: 3 (lower is better)
Translates to: LACHPGSTQLGGTATDVGSHPRR*LRQTPP
Trigger: GGGAGGTGTTTGCCTCAGCAACCTCCTGGGGTGAGA...ACCTACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GCTGCCAGCGATAGTCCCAGTTTTGCTGTGTGGCAGCCAGTCGTGATGCTTCCACGTCGATCCCACACTTaGCAGATGGCATCGTCTCCC +
Preference number: 3 (lower is better)
Translates to: AASDSPSFAVWQPVVMLPRRSHT*QMASSP
Trigger: GGGAGACGATGCCATCTGCAAAGTGTGGGATCGACG...TGGAAGCATCACGACTGGCTGCCACACAGCAAAACTGGGACTATCGCTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GCTGCCAGCGATAGTCCCAGTTTTGCTGTGTGGCAGCCAGTCGTGATGCTTCCAAGTGCACCCACAGGCTaGGGATCATCCTCCCTCATG +
Preference number: 3 (lower is better)
Translates to: AASDSPSFAVWQPVVMLPSAPTG*GSSSLM
Trigger: CATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACT...TGGAAGCATCACGACTGGCTGCCACACAGCAAAACTGGGACTATCGCTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 72 bp ACCAGCTGGAGTACAGGAAGTGGTTTCCATCAGGGGTaGAGGCCACGTCCAGGACACTCCAGCCTACATCCC +
Preference number: 3 (lower is better)
Translates to: TSWSTGSGFHQG*RPRPGHSSLHP
Trigger: GGGATGTAGGCTGGAGTGTCCTGGACGTGGCCTTCACCCCTGATGGAAACCACTTCCTGTACTCCAGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 72 bp GTCAATAAAGGTGATGCCATCCTGGTGCCCGGCCAGTaGACCCACAGGCTTGGGATCATCCTCCCTCATGGT +
Preference number: 3 (lower is better)
Translates to: VNKGDAILVPGQ*THRLGIILPHG
Trigger: ACCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAGGATGGCATCACCTTTATTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp AAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTACCACTTGGCCCAGTTaGGGGGTGGTCAGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: KHLPTHPVHPRRPQKERSTTWPS*GVVSPG
Trigger: GCCTGGACTGACCACCCCCAAACTGGGCCAAGTGGT...AGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CTTTGCAGATGGCATCGTCTCCCCCAGAGAACAGGATTTGGGAGCTTATGTCAGACCACTTGGCCCAGTTaGGGGGTGGTCAGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: LCRWHRLPQRTGFGSLCQTTWPS*GVVSPG
Trigger: GCCTGGACTGACCACCCCCAAACTGGGCCAAGTGGT...CTGACATAAGCTCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTTCTCACCCCAGGAGGTaGCTGAGGCAAACACCTCCC +
Preference number: 3 (lower is better)
Translates to: LALMATNLTLSVKTWAKGSHPRR*LRQTPP
Trigger: GGGAGGTGTTTGCCTCAGCAACCTCCTGGGGTGAGA...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGACGTCGATCCCACACTTaGCAGATGGCATCGTCTCCC +
Preference number: 3 (lower is better)
Translates to: LRQTPPYPSCPPSKTSERRRSHT*QMASSP
Trigger: GGGAGACGATGCCATCTGCAAAGTGTGGGATCGACG...TCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 72 bp GCGATAGTCCCAGTTTTGCTGTGTGGCAGCCAGTCGTaGTGCTTCCATGCCTTCTCGGCTGGAAAAGCGCCT +
Preference number: 3 (lower is better)
Translates to: AIVPVLLCGSQS*CFHAFSAGKAP
Trigger: AGGCGCTTTTCCAGCCGAGAAGGCATGGAAGCATCACGACTGGCTGCCACACAGCAAAACTGGGACTATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 72 bp GGCATGTCATCCTGGAAGTACTCAGCTTGGCGGTACTaGCACAGACGTAGGTTCCCATCCCACGAACTGCTG +
Preference number: 3 (lower is better)
Translates to: GMSSWKYSAWRY*HRRRFPSHELL
Trigger: CAGCAGTTCGTGGGATGGGAACCTACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 72 bp CCTCCCTCATGGTTCGTCGATCCCACACTTTGCAGATaGCATCGTCTCCCCCAGAGAACAGGATTTGGGAGC +
Preference number: 3 (lower is better)
Translates to: PPSWFVDPTLCR*HRLPQRTGFGS
Trigger: GCTCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGATCGACGAACCATGAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCACCACTTGGCCCAGTTaGGGGGTGGTCAGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSTTWPS*GVVSPG
Trigger: GCCTGGACTGACCACCCCCAAACTGGGCCAAGTGGT...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CTGGCATGTCATCCTGGAAGTACTCAGCTTGGCGGTACTGCCACAGACGTAGGTCCCACAGACAGTTTATaGGGAGAGCCACAGCCAGTG +
Preference number: 3 (lower is better)
Translates to: LACHPGSTQLGGTATDVGPTDSL*GEPQPV
Trigger: CACTGGCTGTGGCTCTCCCAATAAACTGTCTGTGGG...ACCTACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GCTGTGGGCTGGGGAGAATCGGCATCGGATCAGAGTGTGAAGCACTCCATGGCCTATAGGCAGCCATCATaGGCTCCTCCTAGTACTTCT +
Preference number: 3 (lower is better)
Translates to: AVGWGESASDQSVKHSMAYRQPS*APPSTS
Trigger: AGAAGTACTAGGAGGAGCCAATGATGGCTGCCTATA...GGCCATGGAGTGCTTCACACTCTGATCCGATGCCGATTCTCCCCAGCCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp TCAGAGTGTGAAGCACTCCATGGCCTCTGTAGGTCATCAAGGAGCTGTCACCTGAGTGCACCCACAGGCTaGGGATCATCCTCCCTCATG +
Preference number: 3 (lower is better)
Translates to: SECEALHGLCRSSRSCHLSAPTG*GSSSLM
Trigger: CATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACT...CAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCACACTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 72 bp ATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTaGGGCAAACACCTCCCTACCCATCCTGTCCACCCT +
Preference number: 3 (lower is better)
Translates to: MRADIVLTPGGC*GKHLPTHPVHP
Trigger: AGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCTTTTATCCTCTTTTGTaGAAGCTGCTGGCCACCAGC +
Preference number: 3 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSFYPLL*KLLATS
Trigger: GCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAA...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GCTCAAGAGGTCATATACAACCACTTTGCCAGTAGAGCAGCCACTGTAGATGAAACCACTTGGCCCAGTTaGGGGGTGGTCAGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: AQEVIYNHFASRAATVDETTWPS*GVVSPG
Trigger: GCCTGGACTGACCACCCCCAAACTGGGCCAAGTGGT...TTCATCTACAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGACCTCTTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTCCCACAGACAGTTTATaGGGAGAGCCACAGCCAGTG +
Preference number: 3 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPPTDSL*GEPQPV
Trigger: CACTGGCTGTGGCTCTCCCAATAAACTGTCTGTGGG...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGCCTACATCCCGAGCCTaGATGCTTTTGAATTTGTGG +
Preference number: 3 (lower is better)
Translates to: AEANTSLPILSTLEDLRKPTSRA*MLLNLW
Trigger: CCACAAATTCAAAAGCATCAAGGCTCGGGATGTAGG...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 72 bp GAATTCACCCTACACAGAACTGGAGGTCAGATCTACTaGGGTGAGGAAAAGGCCACAGATGGGCAGGGCACT +
Preference number: 3 (lower is better)
Translates to: EFTLHRTGGQIY*GEEKATDGQGT
Trigger: AGTGCCCTGCCCATCTGTGGCCTTTTCCTCACCTCAGTAGATCTGACCTCCAGTTCTGTGTAGGGTGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 72 bp ACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATaGCCTGCCACACTCTGGCTAGAGATCGAAATCCAA +
Preference number: 3 (lower is better)
Translates to: TLVARSGTPDNG*PATLWLEIEIQ
Trigger: TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 72 bp CTCCTAGTACTTCTCGTCCATCTGAGGAGACTGCGATaGAGAAGACAGCAAAGCGACGCTCATCTGGCCTTA +
Preference number: 3 (lower is better)
Translates to: LLVLLVHLRRLR*RRQQSDAHLAL
Trigger: TAAGGCCAGATGAGCGTCGCTTTGCTGTCTTCTCCATCGCAGTCTCCTCAGATGGACGAGAAGTACTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 72 bp CAGACTCTGTTCATGTCAGACTCTGGCATGTCATCCTaGAAGTACTCAGCTTGGCGGTACTGCCACAGACGT +
Preference number: 3 (lower is better)
Translates to: QTLFMSDSGMSS*KYSAWRYCHRR
Trigger: ACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGAGTCTGACATGAACAGAGTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 72 bp AGGGCCACTGGAACAGACTCTGTTCATGTCAGACTCTaGCATGTCATCCTGGAAGTACTCAGCTTGGCGGTA +
Preference number: 3 (lower is better)
Translates to: RATGTDSVHVRL*HVILEVLSLAV
Trigger: TACCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGAGTCTGACATGAACAGAGTCTGTTCCAGTGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACTCTCACCCCAGGAGGTaGCTGAGGCAAACACCTCCC +
Preference number: 3 (lower is better)
Translates to: PIPLRPVFSLQSPSMRADSHPRR*LRQTPP
Trigger: GGGAGGTGTTTGCCTCAGCAACCTCCTGGGGTGAGA...GTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCCCCACAGACAGTTTATaGGGAGAGCCACAGCCAGTG +
Preference number: 3 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSPTDSL*GEPQPV
Trigger: CACTGGCTGTGGCTCTCCCAATAAACTGTCTGTGGG...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CCAACTGACATCACGCACACAGGCCTTGTGATTGGTCAGCTTCTTAACAATGTGCTGGAAGTACTCAGCTaGGCGGTACTGCCACAGACG +
Preference number: 3 (lower is better)
Translates to: PTDITHTGLVIGQLLNNVLEVLS*AVLPQT
Trigger: CGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAG...CACATTGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCGTGATGTCAGTTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGATCTCACCCCAGGAGGTaGCTGAGGCAAACACCTCCC +
Preference number: 3 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRSHPRR*LRQTPP
Trigger: GGGAGGTGTTTGCCTCAGCAACCTCCTGGGGTGAGA...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp TCAGAGTGTGAAGCACTCCATGGCCTCTGTAGGTCATCAAGGAGCTGTCACCTGCGAGCCTTGATGCTTTaGAATTTGTGGAATCGGCCA +
Preference number: 3 (lower is better)
Translates to: SECEALHGLCRSSRSCHLRALML*NLWNRP
Trigger: TGGCCGATTCCACAAATTCAAAAGCATCAAGGCTCG...CAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCACACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp TCGATCCCACACTTTGCAGATGGCATCGTCTCCCCCAGAGAACAGGATTTGGGACGAGCCTTGATGCTTTaGAATTTGTGGAATCGGCCA +
Preference number: 3 (lower is better)
Translates to: SIPHFADGIVSPREQDLGRALML*NLWNRP
Trigger: TGGCCGATTCCACAAATTCAAAAGCATCAAGGCTCG...TCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGATCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCAACCTACATCCCGAGCCTaGATGCTTTTGAATTTGTGG +
Preference number: 3 (lower is better)
Translates to: GTPDNGCPATLWLEIEIQPTSRA*MLLNLW
Trigger: CCACAAATTCAAAAGCATCAAGGCTCGGGATGTAGG...TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GGCTTGGGATCATCCTCCCTCATGGTTCGTCGATCCCACACTTTGCAGATGGCAAAGAGTACGCCGGTTTaGTTCTCGGTCAAAGACATA +
Preference number: 3 (lower is better)
Translates to: GLGSSSLMVRRSHTLQMAKSTPV*FSVKDI
Trigger: TATGTCTTTGACCGAGAACAAAACCGGCGTACTCTT...TGCCATCTGCAAAGTGTGGGATCGACGAACCATGAGGGAGGATGATCCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTTCATATACAACCACTTaGCCAGTAGAGCAGCCACTG +
Preference number: 3 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGSYTTT*PVEQPL
Trigger: CAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGA...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 72 bp AAGGGATGCCAACTGACATCACGCACACAGGCCTTGTaGTTGGTCAGCTTCTTAACAATGTGGCCGCTCAAG +
Preference number: 3 (lower is better)
Translates to: KGCQLTSRTQAL*LVSFLTMWPLK
Trigger: CTTGAGCGGCCACATTGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CCA 72 bp TTGCAGATGGCATCGTCTCCCCCAGAGAACAGGATTTaGGAGCTTATGTCAGCAAAGGCCACTGCATTCACA +
Preference number: 3 (lower is better)
Translates to: LQMASSPPENRI*ELMSAKATAFT
Trigger: TGTGAATGCAGTGGCCTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTTTTTATCCTCTTTTGTaGAAGCTGCTGGCCACCAGC +
Preference number: 3 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPFYPLL*KLLATS
Trigger: GCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAA...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGTGCACCCACAGGCTaGGGATCATCCTCCCTCATG +
Preference number: 3 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPSAPTG*GSSSLM
Trigger: CATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACT...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CACTGCATTCACATCGTCCTCATGAGACTCGATCTGAAGAGTACGCCGGTTTTGTCGGATCGTCTGATCTaGGCAAGCAGACATGAAGAT +
Preference number: 3 (lower is better)
Translates to: HCIHIVLMRLDLKSTPVLSDRLI*ASRHED
Trigger: ATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGA...CAAAACCGGCGTACTCTTCAGATCGAGTCTCATGAGGACGATGTGAATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAATCGGATCGTCTGATCTaGGCAAGCAGACATGAAGAT +
Preference number: 3 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQSDRLI*ASRHED
Trigger: ATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGA...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GTGGCCGCTCAAGAGGTCATATACAACCACTTTGCCAGTAGAGCAGCCACTGTAAAGAGTACGCCGGTTTaGTTCTCGGTCAAAGACATA +
Preference number: 3 (lower is better)
Translates to: VAAQEVIYNHFASRAATVKSTPV*FSVKDI
Trigger: TATGTCTTTGACCGAGAACAAAACCGGCGTACTCTT...TACAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGACCTCTTGAGCGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTAAGAGTACGCCGGTTTaGTTCTCGGTCAAAGACATA +
Preference number: 3 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPKSTPV*FSVKDI
Trigger: TATGTCTTTGACCGAGAACAAAACCGGCGTACTCTT...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CCAACTGACATCACGCACACAGGCCTTGTGATTGGTCAGCTTCTTAACAATGTGTGTGTCTTGATCTCATaGTATTCCAGCTCCCGGGTG +
Preference number: 3 (lower is better)
Translates to: PTDITHTGLVIGQLLNNVCVLIS*YSSSRV
Trigger: CACCCGGGAGCTGGAATACAATGAGATCAAGACACA...CACATTGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCGTGATGTCAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp CACATCGTCCTCATGAGACTCGATCTGAAGAGTACGCCGGTTTTGTTCTCGGTCAATCCCACCTGTGTCTaGATCTCATTGTATTCCAGC +
Preference number: 3 (lower is better)
Translates to: HIVLMRLDLKSTPVLFSVNPTCV*ISLYSS
Trigger: GCTGGAATACAATGAGATCAAGACACAGGTGGGATT...GACCGAGAACAAAACCGGCGTACTCTTCAGATCGAGTCTCATGAGGACGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 72 bp CGTACAGTCGGATCGTCTGATCTTGGCAAGCAGACATaGAGATTTGACCATCTTTGCTGTAGATGCCGCAGA +
Preference number: 3 (lower is better)
Translates to: RTVGSSDLGKQT*RFDHLCCRCRR
Trigger: TCTGCGGCATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGACTGTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR GCA 72 bp GAACAGGATTTGGGAGCTTATGTCAGCAAAGGCCACTaGATTCACATCGTCCTCATGAGACTCGATCTGAAG +
Preference number: 3 (lower is better)
Translates to: EQDLGAYVSKGH*IHIVLMRLDLK
Trigger: CTTCAGATCGAGTCTCATGAGGACGATGTGAATGCAGTGGCCTTTGCTGACATAAGCTCCCAAATCCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GAGACTGCGATGGAGAAGACAGCAAAGCGACGCTCATCTGGCCTTAAATCCAGGAGCAGACATGAAGATTaGACCATCTTTGCTGTAGAT +
Preference number: 3 (lower is better)
Translates to: ETAMEKTAKRRSSGLKSRSRHED*TIFAVD
Trigger: ATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCT...CCTGGATTTAAGGCCAGATGAGCGTCGCTTTGCTGTCTTCTCCATCGCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp AAGCGACGCTCATCTGGCCTTAAATCCAGGGCAGTATGTGTGTCTCCTTCCCCAAGCAGACATGAAGATTaGACCATCTTTGCTGTAGAT +
Preference number: 3 (lower is better)
Translates to: KRRSSGLKSRAVCVSPSPSRHED*TIFAVD
Trigger: ATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCT...TGGGGAAGGAGACACACATACTGCCCTGGATTTAAGGCCAGATGAGCGTCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp ACAGGCCTTGTGATTGGTCAGCTTCTTAACAATGTGGCCGCTCAAGAGGTCATACGAGCCTTGATGCTTTaGAATTTGTGGAATCGGCCA +
Preference number: 3 (lower is better)
Translates to: TGLVIGQLLNNVAAQEVIRALML*NLWNRP
Trigger: TGGCCGATTCCACAAATTCAAAAGCATCAAGGCTCG...TATGACCTCTTGAGCGGCCACATTGTTAAGAAGCTGACCAATCACAAGGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp ACAGGCCTTGTGATTGGTCAGCTTCTTAACAATGTGGCCGCTCAAGAGGTCATACCTACATCCCGAGCCTaGATGCTTTTGAATTTGTGG +
Preference number: 3 (lower is better)
Translates to: TGLVIGQLLNNVAAQEVIPTSRA*MLLNLW
Trigger: CCACAAATTCAAAAGCATCAAGGCTCGGGATGTAGG...TATGACCTCTTGAGCGGCCACATTGTTAAGAAGCTGACCAATCACAAGGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp TGTGTCTCCTTCCCCATAGATGTTGCAGATATGAATGTAGTCAGACCAGCTGGATGTGTCTTGATCTCATaGTATTCCAGCTCCCGGGTG +
Preference number: 3 (lower is better)
Translates to: CVSFPIDVADMNVVRPAGCVLIS*YSSSRV
Trigger: CACCCGGGAGCTGGAATACAATGAGATCAAGACACA...TCCAGCTGGTCTGACTACATTCATATCTGCAACATCTATGGGGAAGGAGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp TTCCCCATAGATGTTGCAGATATGAATGTAGTCAGACCAGCTGGAGTACAGGAATCGGATCGTCTGATCTaGGCAAGCAGACATGAAGAT +
Preference number: 3 (lower is better)
Translates to: FPIDVADMNVVRPAGVQESDRLI*ASRHED
Trigger: ATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGA...TTCCTGTACTCCAGCTGGTCTGACTACATTCATATCTGCAACATCTATGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp TTGGTCAGCTTCTTAACAATGTGGCCGCTCAAGAGGTCATATACAACCACTTTGTATAGGCAGCCATCATaGGCTCCTCCTAGTACTTCT +
Preference number: 3 (lower is better)
Translates to: LVSFLTMWPLKRSYTTTLYRQPS*APPSTS
Trigger: AGAAGTACTAGGAGGAGCCAATGATGGCTGCCTATA...CAAAGTGGTTGTATATGACCTCTTGAGCGGCCACATTGTTAAGAAGCTGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 72 bp AGATGCCGCAGAAAGCCTTCTGAGAGTAGGTATCAGTaGAGCTTAGATCATTGGGCAAGAAGTGAGACATCA +
Preference number: 3 (lower is better)
Translates to: RCRRKPSESRYQ*SLDHWARSETS
Trigger: TGATGTCTCACTTCTTGCCCAATGATCTAAGCTTCACTGATACCTACTCTCAGAAGGCTTTCTGCGGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GTGAAAGAAGTCCTGTTTTATCCTCTTTTGTTGAAGCTGCTGGCCACCAGCAATAATCCCACCTGTGTCTaGATCTCATTGTATTCCAGC +
Preference number: 3 (lower is better)
Translates to: VKEVLFYPLLLKLLATSNNPTCV*ISLYSS
Trigger: GCTGGAATACAATGAGATCAAGACACAGGTGGGATT...ATTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAACAGGACTTCTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR-3UTR CAA 90 bp GTGAAAGAAGTCCTGTTTTATCCTCTTTTGTTGAAGCTGCTGGCCACCAGCAATAGCAGACATGAAGATTaGACCATCTTTGCTGTAGAT +
Preference number: 3 (lower is better)
Translates to: VKEVLFYPLLLKLLATSNSRHED*TIFAVD
Trigger: ATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCT...ATTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAACAGGACTTCTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR TCA 72 bp TGTCTACACTATGAGCCAATATCTAACATCAGAACATaGTTAAACACACTCAAGACTCTTGTAGCCAGAAGC +
Preference number: 3 (lower is better)
Translates to: CLHYEPISNIRT*LNTLKTLVARS
Trigger: GCTTCTGGCTACAAGAGTCTTGAGTGTGTTTAATCATGTTCTGATGTTAGATATTGGCTCATAGTGTAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp CCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCGTGATGCCATCCTGGTaGCCGGCCAGTGCACCCACA +
Preference number: 4 (lower is better)
Translates to: PSLGVVSPGSAWAQTLGFVMPSW*PASAPT
Trigger: TGTGGGTGCACTGGCCGGGCACCAGGATGGCATCAC...GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCCATCAGGGGTaGAGGCCACGTCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLGFHQG*RPRPGH
Trigger: GTGTCCTGGACGTGGCCTTCACCCCTGATGGAAACC...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGAGCAGCCACTGTAGATaGACTGCTGGCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLSSHCR*TAGRCC
Trigger: ACAGCACCGGCCAGCAGTTCATCTACAGTGGCTGCT...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CTCACCCAGTGTGAGCAGTTCCTCCACGTACTCCCCAGAAGGGGAAAGGGAGGACTGGTGCCCGGCCAGTaGACCCACAGGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: LTQCEQFLHVLPRRGKGGLVPGQ*THRLGI
Trigger: GATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAG...TCCTCCCTTTCCCCTTCTGGGGAGTACGTGGAGGAACTGCTCACACTGGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCCCCACACTTTGCAGATaGCATCGTCTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PSLGVVSPGSAWAQTLGFPTLCR*HRLPQR
Trigger: TCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGG...GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
3UTR CAA 72 bp ATGCCATCCTGGTGCCCGGCCAGTGCACCCACAGGCTaGGGATCATCCTCCCTCATGGTTCGTCGATCCCAC +
Preference number: 4 (lower is better)
Translates to: MPSWCPASAPTG*GSSSLMVRRSH
Trigger: GTGGGATCGACGAACCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAGGATGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
3UTR CAA 72 bp CGCCCCGTGGCCAATCCCACCTGTGTCTTGATCTCATaGTATTCCAGCTCCCGGGTGTCGGGGGTCGCATCC +
Preference number: 4 (lower is better)
Translates to: RPVANPTCVLIS*YSSSRVSGVAS
Trigger: GGATGCGACCCCCGACACCCGGGAGCTGGAATACAATGAGATCAAGACACAGGTGGGATTGGCCACGGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTGGTTTCCATCAGGGGTaGAGGCCACGTCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSGFHQG*RPRPGH
Trigger: GTGTCCTGGACGTGGCCTTCACCCCTGATGGAAACC...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGTCGTGATGCTTCCATaGCTTCTCGGCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLVVMLP*LLGWKS
Trigger: GCTTTTCCAGCCGAGAAGGCATGGAAGCATCACGAC...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTCTGGCATGTCATCCTaGAAGTACTCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PSLGVVSPGSAWAQTLGFSGMSS*KYSAWR
Trigger: CCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGA...GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTGTGGCAGCCAGTCGTaGTGCTTCCATGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSCGSQS*CFHAFS
Trigger: CGAGAAGGCATGGAAGCATCACGACTGGCTGCCACA...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp AGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: SLGVVSPGSAWAQTLGFCSQALS*SSSESE
Trigger: CTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGA...ACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR GCA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGTCAGCAAAGGCCACTaGATTCACATCGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLVSKGH*IHIVLM
Trigger: CATGAGGACGATGTGAATGCAGTGGCCTTTGCTGAC...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTACTGGTGCCCGGCCAGTaGACCCACAGGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: PPYPSCPPSKTSERKVSVLVPGQ*THRLGI
Trigger: GATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAG...TACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGGTGATGCCATCCTGGTaGCCGGCCAGTGCACCCACA +
Preference number: 4 (lower is better)
Translates to: AEANTSLPILSTLEDLRKVMPSW*PASAPT
Trigger: TGTGGGTGCACTGGCCGGGCACCAGGATGGCATCAC...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTGGAAAAGGCCACAGATaGGCAGGGCACTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSGKGHR*AGHWSR
Trigger: CCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCC...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CTCCAAGGGAGAAGCTTCCCCGGTGGCAGAGGCCCCGTTCTCTCTGGTGTAACATGCACCAGTCTCACTTaGCCTCTGGGCCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: LQGRSFPGGRGPVLSGVTCTSLT*PLGQIH
Trigger: GTGGATCTGGCCCAGAGGCCAAGTGAGACTGGTGCA...TGTTACACCAGAGAGAACGGGGCCTCTGCCACCGGGGAAGCTTCTCCCTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTGCTGCACCTCTTCCTTaGACCAGTCTCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSAAPLP*TSLTWP
Trigger: AGGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGC...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTCTGGTGCCCGGCCAGTaGACCCACAGGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: LALMATNLTLSVKTWAKGLVPGQ*THRLGI
Trigger: GATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAG...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGGAGTCCGAGAGGGCCTaGGGAGGAGATAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: AEANTSLPILSTLEDLRKESERA*GGDRPV
Trigger: TACTGGCCTATCTCCTCCGCAGGCCCTCTCGGACTC...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117701.8
CDS-3UTR CCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTCCCACACTTTGCAGATaGCATCGTCTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSPTLCR*HRLPQR
Trigger: TCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGG...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCGTGCACCCACAGGCTTaGGATCATCCTCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSVHPQA*DHPPSW
Trigger: CCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCAC...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp AGCGGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCAAGGTGATGCCATCCTaGTGCCCGGCCAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: SGTPDNGCPATLWLEIEIKVMPS*CPASAP
Trigger: GGGTGCACTGGCCGGGCACCAGGATGGCATCACCTT...GATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLIPPVS*SHCIPA
Trigger: AGCTGGAATACAATGAGATCAAGACACAGGTGGGAT...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR TCA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGAGAGTAGGTATCAGTaGAGCTTAGATCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLESRYQ*SLDHWA
Trigger: TGCCCAATGATCTAAGCTTCACTGATACCTACTCTC...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGCTTGGCAAGCAGACATaGAGATTTGACCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLLGKQT*RFDHLC
Trigger: GCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAG...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCCAAAGGGATGCCAACTaGCATCACGCACACAGGCCT +
Preference number: 4 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSQRDAN*HHAHRP
Trigger: AGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTG...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp CAGGAGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCAAAGGGATGCCAACTaGCATCACGCACACAGGCCT +
Preference number: 4 (lower is better)
Translates to: QEVAEANTSLPILSTLEDQRDAN*HHAHRP
Trigger: AGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTG...GTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CTCACCCAGTGTGAGCAGTTCCTCCACGTACTCCCCAGAAGGGGAAAGGGAGGAGTCTCACTTGGCCTCTaGGGAGGAGATAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: LTQCEQFLHVLPRRGKGGVSLGL*GGDRPV
Trigger: TACTGGCCTATCTCCTCCGCAGAGGCCAAGTGAGAC...TCCTCCCTTTCCCCTTCTGGGGAGTACGTGGAGGAACTGCTCACACTGGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR CCA 90 bp AGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTCTGGAGTACAGGAAGTaGTTTCCATCAGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SLGVVSPGSAWAQTLGFCLEYRK*FPSGVK
Trigger: CTTCACCCCTGATGGAAACCACTTCCTGTACTCCAG...ACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CAGGAGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCCCACACTTTGCAGATaGCATCGTCTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QEVAEANTSLPILSTLEDPTLCR*HRLPQR
Trigger: TCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGG...GTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp AGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGTGCACCCACAGGCTTaGGATCATCCTCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: RLLRQTPPYPSCPPSKTSVHPQA*DHPPSW
Trigger: CCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCAC...TGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGGTGCACCCACAGGCTTaGGATCATCCTCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: AEANTSLPILSTLEDLRKVHPQA*DHPPSW
Trigger: CCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCAC...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTGGAAGTACTCAGCTTaGCGGTACTGCCACAGACGT +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSWKYSA*RYCHRR
Trigger: ACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCA...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCGTTCATGTCAGACTCTaGCATGTCATCCTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PSLGVVSPGSAWAQTLGFVHVRL*HVILEV
Trigger: TACTTCCAGGATGACATGCCAGAGTCTGACATGAAC...GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
3UTR CAA 72 bp CCAAGCAGACTGGGTATGAATGCACGAGGAAACCACTaGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PSRLGMNARGNH*AQFGGGQSRLS
Trigger: GCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGTGGTTTCCTCGTGCATTCATACCCAGTCTGCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp GGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCAAGGTTTCCATCAGGGGTaGAGGCCACGTCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: GTPDNGCPATLWLEIEIQGFHQG*RPRPGH
Trigger: GTGTCCTGGACGTGGCCTTCACCCCTGATGGAAACC...TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGCAAAGCTTAATGGTCTaGTCTTTGGAGTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLQSLMV*SLELEM
Trigger: CATCTCCAACTCCAAAGATCAGACCATTAAGCTTTG...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TTGTTGAAGCTGCTGGCCACCAGCAATGATAGGATCCAATGGCGAGTTGGGCCGTGTGGCAGCCAGTCGTaGTGCTTCCATGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LLKLLATSNDRIQWRVGPCGSQS*CFHAFS
Trigger: CGAGAAGGCATGGAAGCATCACGACTGGCTGCCACA...CGGCCCAACTCGCCATTGGATCCTATCATTGCTGGTGGCCAGCAGCTTCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp CCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTAAGCAGCCACTGTAGATaGACTGCTGGCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PPYPSCPPSKTSERKVSVSSHCR*TAGRCC
Trigger: ACAGCACCGGCCAGCAGTTCATCTACAGTGGCTGCT...TACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGGTCTCACTTGGCCTCTaGGGAGGAGATAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: AEANTSLPILSTLEDLRKVSLGL*GGDRPV
Trigger: TACTGGCCTATCTCCTCCGCAGAGGCCAAGTGAGAC...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR CCA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCCTGAGGAGACTGCGATaGAGAAGACAGCAAAGCGAC +
Preference number: 4 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSLRRLR*RRQQSD
Trigger: GTCGCTTTGCTGTCTTCTCCATCGCAGTCTCCTCAG...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTGATCATCCTCCCTCATaGTTCGTCGATCCCACACTT +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSDHPPS*FVDPTL
Trigger: AAGTGTGGGATCGACGAACCATGAGGGAGGATGATC...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp AAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTAAGGTGATGCCATCCTaGTGCCCGGCCAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: KHLPTHPVHPRRPQKERSKVMPS*CPASAP
Trigger: GGGTGCACTGGCCGGGCACCAGGATGGCATCACCTT...AGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTCAAGGAGCTGTCACCTaGGAGCTTCAACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSQGAVT*ELQLLP
Trigger: TGGAAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTG...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTAGGAAAAGGCCACAGATaGGCAGGGCACTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: PPYPSCPPSKTSERKVSVGKGHR*AGHWSR
Trigger: CCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCC...TACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp GGCATGTCATCCTGGAAGTACTCAGCTTGGCGGTACTGCCACAGACGTAGGTTCCCGAGAGGGCCTGGATaGGCTGTAAATTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GMSSWKYSAWRYCHRRRFPRGPG*AVNLLH
Trigger: GTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGG...GAACCTACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAGGATGACATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTTGTGGCAGCCAGTCGTaGTGCTTCCATGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LALMATNLTLSVKTWAKGCGSQS*CFHAFS
Trigger: CGAGAAGGCATGGAAGCATCACGACTGGCTGCCACA...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp AGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTCATCCCACGAACTGCTaGCAATCTTTTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SLGVVSPGSAWAQTLGFCHPTNC*QSFLQR
Trigger: CCTTTGAAGAAAAGATTGTCAGCAGTTCGTGGGATG...ACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAGCTGCACCTCTTCCTTaGACCAGTCTCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LRQTPPYPSCPPSKTSERAAPLP*TSLTWP
Trigger: AGGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGC...TCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp CTCACCCAGTGTGAGCAGTTCCTCCACGTACTCCCCAGAAGGGGAAAGGGAGGACTCTGGTGTAACATCTaGGGAAAACTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LTQCEQFLHVLPRRGKGGLWCNI*GKLCCS
Trigger: GCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGAG...TCCTCCCTTTCCCCTTCTGGGGAGTACGTGGAGGAACTGCTCACACTGGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCCTTCCCCATAGATGTTaGAGATATGAATGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: PSLGVVSPGSAWAQTLGFLPHRC*RYECSQ
Trigger: CTGACTACATTCATATCTGCAACATCTATGGGGAAG...GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTAGTCGATCCCACACTTTaGAGATGGCATCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PPYPSCPPSKTSERKVSVVDPTL*RWHRLP
Trigger: GGGGAGACGATGCCATCTGCAAAGTGTGGGATCGAC...TACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGCTGGTGCCCGGCCAGTaGACCCACAGGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLLVPGQ*THRLGI
Trigger: GATCCCAAGCCTGTGGGTGCACTGGCCGGGCACCAG...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp AGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGTCGTGATGCTTCCATaGCTTCTCGGCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: RLLRQTPPYPSCPPSKTSVVMLP*LLGWKS
Trigger: GCTTTTCCAGCCGAGAAGGCATGGAAGCATCACGAC...TGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CAGGAGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACGAGTCCGAGAGGGCCTaGATGAGCTGTAAATTTGCT +
Preference number: 4 (lower is better)
Translates to: QEVAEANTSLPILSTLEDESERA*MSCKFA
Trigger: AGCAAATTTACAGCTCATCCAGGCCCTCTCGGACTC...GTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CCA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCAGGCCCCGTTCTCTCTaGTGTAACATCTGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSRPRSL*CNICGK
Trigger: TTTTCCGCAGATGTTACACCAGAGAGAACGGGGCCT...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTGTAGTCAGACCAGCTaGAGTACAGGAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSCSQTS*STGSGF
Trigger: GAAACCACTTCCTGTACTCCAGCTGGTCTGACTACA...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCCAAGGAGCTGTCACCTaGGAGCTTCAACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSQGAVT*ELQLLP
Trigger: TGGAAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTG...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGTGGAAGTACTCAGCTTaGCGGTACTGCCACAGACGT +
Preference number: 4 (lower is better)
Translates to: AEANTSLPILSTLEDLRKWKYSA*RYCHRR
Trigger: ACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCA...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTGGAAAAGGCCACAGATaGGCAGGGCACTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LALMATNLTLSVKTWAKGGKGHR*AGHWSR
Trigger: CCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCC...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCCGAGAGGGCCTGGATaGGCTGTAAATTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGPRGPG*AVNLLH
Trigger: GTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGG...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSIPPVS*SHCIPA
Trigger: AGCTGGAATACAATGAGATCAAGACACAGGTGGGAT...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR TCA 90 bp AGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCATACTTCTCGTCCATCTaGGGAGACTGCGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: RLLRQTPPYPSCPPSKTSYFSSI*GDCDGE
Trigger: TTCTCCATCGCAGTCTCCTCAGATGGACGAGAAGTA...TGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGCATCGGATCAGAGTGTaGAGCACTCCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALHRIRV*STPWPL
Trigger: CAGAGGCCATGGAGTGCTTCACACTCTGATCCGATG...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCAAAGGGATGCCAACTaGCATCACGCACACAGGCCT +
Preference number: 4 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGQRDAN*HHAHRP
Trigger: AGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTG...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGGTCTCACTTGGCCTCTaGGGAGGAGATAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALVSLGL*GGDRPV
Trigger: TACTGGCCTATCTCCTCCGCAGAGGCCAAGTGAGAC...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR GCA 90 bp GGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCAAGTCTCACTTGGCCTCTaGGGAGGAGATAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: GTPDNGCPATLWLEIEIQVSLGL*GGDRPV
Trigger: TACTGGCCTATCTCCTCCGCAGAGGCCAAGTGAGAC...TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR GCA 90 bp TACAACCACTTTGCCAGTAGAGCAGCCACTGTAGATGAACTGCTGGCCGGTGCTGCTGCACCTCTTCCTTaGACCAGTCTCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: YNHFASRAATVDELLAGAAAPLP*TSLTWP
Trigger: AGGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGC...AGCACCGGCCAGCAGTTCATCTACAGTGGCTGCTCTACTGGCAAAGTGGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp TCGATCCCACACTTTGCAGATGGCATCGTCTCCCCCAGAGAACAGGATTTGGGAGCTGCACCTCTTCCTTaGACCAGTCTCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SIPHFADGIVSPREQDLGAAPLP*TSLTWP
Trigger: AGGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGC...TCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGATCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGTCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALSQALS*SSSESE
Trigger: CTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGA...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR GCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGGTCGATCCCACACTTTaGAGATGGCATCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALVDPTL*RWHRLP
Trigger: GGGGAGACGATGCCATCTGCAAAGTGTGGGATCGAC...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGGTGATGCCATCCTGGTaGCCGGCCAGTGCACCCACA +
Preference number: 4 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLVMPSW*PASAPT
Trigger: TGTGGGTGCACTGGCCGGGCACCAGGATGGCATCAC...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GCTGCCAGCGATAGTCCCAGTTTTGCTGTGTGGCAGCCAGTCGTGATGCTTCCAGAGTCCGAGAGGGCCTaGATGAGCTGTAAATTTGCT +
Preference number: 4 (lower is better)
Translates to: AASDSPSFAVWQPVVMLPESERA*MSCKFA
Trigger: AGCAAATTTACAGCTCATCCAGGCCCTCTCGGACTC...TGGAAGCATCACGACTGGCTGCCACACAGCAAAACTGGGACTATCGCTGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CCA 90 bp AGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCACTGGAGTACAGGAAGTaGTTTCCATCAGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RLLRQTPPYPSCPPSKTSLEYRK*FPSGVK
Trigger: CTTCACCCCTGATGGAAACCACTTCCTGTACTCCAG...TGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAAGGTGATGCCATCCTaGTGCCCGGCCAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLKVMPS*CPASAP
Trigger: GGGTGCACTGGCCGGGCACCAGGATGGCATCACCTT...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGATCTGGCATGTCATCCTaGAAGTACTCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LRQTPPYPSCPPSKTSERSGMSS*KYSAWR
Trigger: CCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGA...TCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATCTGGCATGTCATCCTaGAAGTACTCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PPYPSCPPSKTSERKVSVSGMSS*KYSAWR
Trigger: CCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGA...TACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
3UTR CAA 72 bp GGATCATCCTCCCTCATGGTTCGTCGATCCCACACTTaGCAGATGGCATCGTCTCCCCCAGAGAACAGGATT +
Preference number: 4 (lower is better)
Translates to: GSSSLMVRRSHT*QMASSPPENRI
Trigger: AATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGATCGACGAACCATGAGGGAGGATGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp AAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCCGAGAGGGCCTGGATaGGCTGTAAATTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KHLPTHPVHPRRPQKERSPRGPG*AVNLLH
Trigger: GTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGG...AGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp CTCACCCAGTGTGAGCAGTTCCTCCACGTACTCCCCAGAAGGGGAAAGGGAGGAATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LTQCEQFLHVLPRRGKGGIPPVS*SHCIPA
Trigger: AGCTGGAATACAATGAGATCAAGACACAGGTGGGAT...TCCTCCCTTTCCCCTTCTGGGGAGTACGTGGAGGAACTGCTCACACTGGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR TCA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCCTTGGCAAGCAGACATaGAGATTTGACCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSLGKQT*RFDHLC
Trigger: GCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAG...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp CTCACCCAGTGTGAGCAGTTCCTCCACGTACTCCCCAGAAGGGGAAAGGGAGGACATCCCACGAACTGCTaGCAATCTTTTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LTQCEQFLHVLPRRGKGGHPTNC*QSFLQR
Trigger: CCTTTGAAGAAAAGATTGTCAGCAGTTCGTGGGATG...TCCTCCCTTTCCCCTTCTGGGGAGTACGTGGAGGAACTGCTCACACTGGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTGCTGCACCTCTTCCTTaGACCAGTCTCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPAAPLP*TSLTWP
Trigger: AGGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGC...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp AAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTTCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: KHLPTHPVHPRRPQKERSSQALS*SSSESE
Trigger: CTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGA...AGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR GCA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGCATCTTTGCTGTAGATaGCGCAGAAAGCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: AEANTSLPILSTLEDLRKHLCCR*RRKPSE
Trigger: CTCAGAAGGCTTTCTGCGGCATCTACAGCAAAGATG...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTAGTCAGCAAAGGCCACTaGATTCACATCGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: PPYPSCPPSKTSERKVSVVSKGH*IHIVLM
Trigger: CATGAGGACGATGTGAATGCAGTGGCCTTTGCTGAC...TACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGGTCGATCCCACACTTTaGAGATGGCATCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: THPVHPRRPQKERSRYTWVDPTL*RWHRLP
Trigger: GGGGAGACGATGCCATCTGCAAAGTGTGGGATCGAC...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTGTCGATCCCACACTTTaGAGATGGCATCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPVDPTL*RWHRLP
Trigger: GGGGAGACGATGCCATCTGCAAAGTGTGGGATCGAC...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCGTGCACCCACAGGCTTaGGATCATCCTCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSVHPQA*DHPPSW
Trigger: CCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCAC...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TTGTTGAAGCTGCTGGCCACCAGCAATGATAGGATCCAATGGCGAGTTGGGCCGCAAGGAGCTGTCACCTaGGAGCTTCAACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLKLLATSNDRIQWRVGPQGAVT*ELQLLP
Trigger: TGGAAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTG...CGGCCCAACTCGCCATTGGATCCTATCATTGCTGGTGGCCAGCAGCTTCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGTCTGGCATGTCATCCTaGAAGTACTCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALSGMSS*KYSAWR
Trigger: CCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGA...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GGAGGAGGCAGAGAATATGCTGAGAATTCACCCTACACAGAACTGGAGGTCAGAGGAAAAGGCCACAGATaGGCAGGGCACTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GGGREYAENSPYTELEVRGKGHR*AGHWSR
Trigger: CCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCC...TCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCGGAAAAGGCCACAGATaGGCAGGGCACTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSGKGHR*AGHWSR
Trigger: CCTACTCCAGTGCCCTGCCCATCTGTGGCCTTTTCC...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGGGTTTCCATCAGGGGTaGAGGCCACGTCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLGFHQG*RPRPGH
Trigger: GTGTCCTGGACGTGGCCTTCACCCCTGATGGAAACC...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTTACTTCTCGTCCATCTaGGGAGACTGCGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: LALMATNLTLSVKTWAKGYFSSI*GDCDGE
Trigger: TTCTCCATCGCAGTCTCCTCAGATGGACGAGAAGTA...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGTACTTCTCGTCCATCTaGGGAGACTGCGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALYFSSI*GDCDGE
Trigger: TTCTCCATCGCAGTCTCCTCAGATGGACGAGAAGTA...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp CAGGAGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCAAAGCTTAATGGTCTaGTCTTTGGAGTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: QEVAEANTSLPILSTLEDQSLMV*SLELEM
Trigger: CATCTCCAACTCCAAAGATCAGACCATTAAGCTTTG...GTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGCAGCCACTGTAGATaGACTGCTGGCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLSSHCR*TAGRCC
Trigger: ACAGCACCGGCCAGCAGTTCATCTACAGTGGCTGCT...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp GGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCAACGCACACAGGCCTTGTaGTTGGTCAGCTTCTTAACA +
Preference number: 4 (lower is better)
Translates to: GTPDNGCPATLWLEIEIQRTQAL*LVSFLT
Trigger: TGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCG...TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGCGCACACAGGCCTTGTaGTTGGTCAGCTTCTTAACA +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALRTQAL*LVSFLT
Trigger: TGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCG...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCGTCTCACTTGGCCTCTaGGGAGGAGATAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSVSLGL*GGDRPV
Trigger: TACTGGCCTATCTCCTCCGCAGAGGCCAAGTGAGAC...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR GCA 90 bp TTGTTGAAGCTGCTGGCCACCAGCAATGATAGGATCCAATGGCGAGTTGGGCCGCATCTTTGCTGTAGATaGCGCAGAAAGCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLKLLATSNDRIQWRVGPHLCCR*RRKPSE
Trigger: CTCAGAAGGCTTTCTGCGGCATCTACAGCAAAGATG...CGGCCCAACTCGCCATTGGATCCTATCATTGCTGGTGGCCAGCAGCTTCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTCTTCCCCATAGATGTTaGAGATATGAATGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSLPHRC*RYECSQ
Trigger: CTGACTACATTCATATCTGCAACATCTATGGGGAAG...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGGTCAGCAAAGGCCACTaGATTCACATCGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALVSKGH*IHIVLM
Trigger: CATGAGGACGATGTGAATGCAGTGGCCTTTGCTGAC...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGTGATGCCATCCTGGTaGCCGGCCAGTGCACCCACA +
Preference number: 4 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRVMPSW*PASAPT
Trigger: TGTGGGTGCACTGGCCGGGCACCAGGATGGCATCAC...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGAGCTGGTGTAACATCTaGGGAAAACTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALSWCNI*GKLCCS
Trigger: GCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGCT...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117701.8
ENSMUST00000143375.8
CDS-3UTR CCA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTGAGTCCGAGAGGGCCTaGATGAGCTGTAAATTTGCT +
Preference number: 4 (lower is better)
Translates to: LALMATNLTLSVKTWAKGESERA*MSCKFA
Trigger: AGCAAATTTACAGCTCATCCAGGCCCTCTCGGACTC...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CCA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTAGGCCCCGTTCTCTCTaGTGTAACATCTGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGRPRSL*CNICGK
Trigger: TTTTCCGCAGATGTTACACCAGAGAGAACGGGGCCT...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCTGAGGAGACTGCGATaGAGAAGACAGCAAAGCGAC +
Preference number: 4 (lower is better)
Translates to: THPVHPRRPQKERSRYTWLRRLR*RRQQSD
Trigger: GTCGCTTTGCTGTCTTCTCCATCGCAGTCTCCTCAG...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCCCCACACTTTGCAGATaGCATCGTCTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSPTLCR*HRLPQR
Trigger: TCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGG...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GGAGGAGGCAGAGAATATGCTGAGAATTCACCCTACACAGAACTGGAGGTCAGACCCACACTTTGCAGATaGCATCGTCTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GGGREYAENSPYTELEVRPTLCR*HRLPQR
Trigger: TCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGG...TCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCCTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAAGGTGATGCCATCCTaGTGCCCGGCCAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPKVMPS*CPASAP
Trigger: GGGTGCACTGGCCGGGCACCAGGATGGCATCACCTT...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGCAAGGAGCTGTCACCTaGGAGCTTCAACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALQGAVT*ELQLLP
Trigger: TGGAAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTG...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGGTTCATGTCAGACTCTaGCATGTCATCCTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: AEANTSLPILSTLEDLRKVHVRL*HVILEV
Trigger: TACTTCCAGGATGACATGCCAGAGTCTGACATGAAC...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CACATCGTCCTCATGAGACTCGATCTGAAGAGTACGCCGGTTTTGTTCTCGGTCGTCTCACTTGGCCTCTaGGCCAGATCCACATCTTCA +
Preference number: 4 (lower is better)
Translates to: HIVLMRLDLKSTPVLFSVVSLGL*ARSTSS
Trigger: TGAAGATGTGGATCTGGCCCAGAGGCCAAGTGAGAC...GACCGAGAACAAAACCGGCGTACTCTTCAGATCGAGTCTCATGAGGACGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp CCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACTGTGGCAGCCAGTCGTaGTGCTTCCATGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PIPLRPVFSLQSPSMRADCGSQS*CFHAFS
Trigger: CGAGAAGGCATGGAAGCATCACGACTGGCTGCCACA...GTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGCATCGGATCAGAGTGTaGAGCACTCCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLHRIRV*STPWPL
Trigger: CAGAGGCCATGGAGTGCTTCACACTCTGATCCGATG...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTCGCACACAGGCCTTGTaGTTGGTCAGCTTCTTAACA +
Preference number: 4 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPRTQAL*LVSFLT
Trigger: TGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCG...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTCTCTGGTGTAACATCTaGGGAAAACTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPLWCNI*GKLCCS
Trigger: GCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGAG...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGGTCAGCAAAGGCCACTaGATTCACATCGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: THPVHPRRPQKERSRYTWVSKGH*IHIVLM
Trigger: CATGAGGACGATGTGAATGCAGTGGCCTTTGCTGAC...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTGTCAGCAAAGGCCACTaGATTCACATCGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPVSKGH*IHIVLM
Trigger: CATGAGGACGATGTGAATGCAGTGGCCTTTGCTGAC...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAAGTCGTGATGCTTCCATaGCTTCTCGGCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQVVMLP*LLGWKS
Trigger: GCTTTTCCAGCCGAGAAGGCATGGAAGCATCACGAC...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGAGGCCCCGTTCTCTCTaGTGTAACATCTGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: THPVHPRRPQKERSRYTWRPRSL*CNICGK
Trigger: TTTTCCGCAGATGTTACACCAGAGAGAACGGGGCCT...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTTGTAGTCAGACCAGCTaGAGTACAGGAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LALMATNLTLSVKTWAKGCSQTS*STGSGF
Trigger: GAAACCACTTCCTGTACTCCAGCTGGTCTGACTACA...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTTGTAGTCAGACCAGCTaGAGTACAGGAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGCSQTS*STGSGF
Trigger: GAAACCACTTCCTGTACTCCAGCTGGTCTGACTACA...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCCTGAGGAGACTGCGATaGAGAAGACAGCAAAGCGAC +
Preference number: 4 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSLRRLR*RRQQSD
Trigger: GTCGCTTTGCTGTCTTCTCCATCGCAGTCTCCTCAG...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp AAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTGATCATCCTCCCTCATaGTTCGTCGATCCCACACTT +
Preference number: 4 (lower is better)
Translates to: KHLPTHPVHPRRPQKERSDHPPS*FVDPTL
Trigger: AAGTGTGGGATCGACGAACCATGAGGGAGGATGATC...AGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp AGCGGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCGTTCATGTCAGACTCTaGCATGTCATCCTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: SGTPDNGCPATLWLEIEIVHVRL*HVILEV
Trigger: TACTTCCAGGATGACATGCCAGAGTCTGACATGAAC...GATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GCTCAAGAGGTCATATACAACCACTTTGCCAGTAGAGCAGCCACTGTAGATGAATGCACCAGTCTCACTTaGCCTCTGGGCCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: AQEVIYNHFASRAATVDECTSLT*PLGQIH
Trigger: GTGGATCTGGCCCAGAGGCCAAGTGAGACTGGTGCA...TTCATCTACAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGACCTCTTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGGAGAGTAGGTATCAGTaGAGCTTAGATCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALESRYQ*SLDHWA
Trigger: TGCCCAATGATCTAAGCTTCACTGATACCTACTCTC...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGCTTGGCAAGCAGACATaGAGATTTGACCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALLGKQT*RFDHLC
Trigger: GCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAG...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACGGTTTCCATCAGGGGTaGAGGCCACGTCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHGFHQG*RPRPGH
Trigger: GTGTCCTGGACGTGGCCTTCACCCCTGATGGAAACC...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGCAGCCACTGTAGATaGACTGCTGGCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPSSHCR*TAGRCC
Trigger: ACAGCACCGGCCAGCAGTTCATCTACAGTGGCTGCT...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCAAAGGGATGCCAACTaGCATCACGCACACAGGCCT +
Preference number: 4 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLQRDAN*HHAHRP
Trigger: AGGCCTGTGTGCGTGATGTCAGTTGGCATCCCTTTG...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAAAGCTGGTGTAACATCTaGGGAAAACTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQSWCNI*GKLCCS
Trigger: GCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGCT...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117701.8
ENSMUST00000143375.8
CDS-3UTR CCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAAAGGCCCCGTTCTCTCTaGTGTAACATCTGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQRPRSL*CNICGK
Trigger: TTTTCCGCAGATGTTACACCAGAGAGAACGGGGCCT...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGCCAGAGAACAGGATTTaGGAGCTTATGTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SCPPSKTSERKVSVYLALPENRI*ELMSAK
Trigger: CTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGG...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TTGGCCCTGATGGCCACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTCCAGAGAACAGGATTTaGGAGCTTATGTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LALMATNLTLSVKTWAKGPENRI*ELMSAK
Trigger: CTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGG...ACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGTGGCCATCAGGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAAGATCATCCTCCCTCATaGTTCGTCGATCCCACACTT +
Preference number: 4 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQDHPPS*FVDPTL
Trigger: AAGTGTGGGATCGACGAACCATGAGGGAGGATGATC...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCGTGCACCCACAGGCTTaGGATCATCCTCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPVHPQA*DHPPSW
Trigger: CCATGAGGGAGGATGATCCCAAGCCTGTGGGTGCAC...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GGAGGAGGCAGAGAATATGCTGAGAATTCACCCTACACAGAACTGGAGGTCAGACAAGGAGCTGTCACCTaGGAGCTTCAACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GGGREYAENSPYTELEVRQGAVT*ELQLLP
Trigger: TGGAAGAAGTTGAAGCTCCCAGGTGACAGCTCCTTG...TCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCCTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGTGGAAGTACTCAGCTTaGCGGTACTGCCACAGACGT +
Preference number: 4 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLWKYSA*RYCHRR
Trigger: ACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCA...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGTCTGGCATGTCATCCTaGAAGTACTCAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLSGMSS*KYSAWR
Trigger: CCGCCAAGCTGAGTACTTCCAGGATGACATGCCAGA...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCCCGAGAGGGCCTGGATaGGCTGTAAATTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPPRGPG*AVNLLH
Trigger: GTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGG...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp GTGAAAGAAGTCCTGTTTTATCCTCTTTTGTTGAAGCTGCTGGCCACCAGCAATCCGAGAGGGCCTGGATaGGCTGTAAATTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VKEVLFYPLLLKLLATSNPRGPG*AVNLLH
Trigger: GTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGG...ATTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAACAGGACTTCTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp AAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTGAGAGTAGGTATCAGTaGAGCTTAGATCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: KHLPTHPVHPRRPQKERSESRYQ*SLDHWA
Trigger: TGCCCAATGATCTAAGCTTCACTGATACCTACTCTC...AGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCTTGGCAAGCAGACATaGAGATTTGACCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: THPVHPRRPQKERSRYTWLGKQT*RFDHLC
Trigger: GCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAG...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCAAAGCTTAATGGTCTaGTCTTTGGAGTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGQSLMV*SLELEM
Trigger: CATCTCCAACTCCAAAGATCAGACCATTAAGCTTTG...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCCATCGGATCAGAGTGTaGAGCACTCCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPHRIRV*STPWPL
Trigger: CAGAGGCCATGGAGTGCTTCACACTCTGATCCGATG...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp GTGAAAGAAGTCCTGTTTTATCCTCTTTTGTTGAAGCTGCTGGCCACCAGCAATCATCGGATCAGAGTGTaGAGCACTCCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VKEVLFYPLLLKLLATSNHRIRV*STPWPL
Trigger: CAGAGGCCATGGAGTGCTTCACACTCTGATCCGATG...ATTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAACAGGACTTCTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGACATCGGATCAGAGTGTaGAGCACTCCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRHRIRV*STPWPL
Trigger: CAGAGGCCATGGAGTGCTTCACACTCTGATCCGATG...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGCGCACACAGGCCTTGTaGTTGGTCAGCTTCTTAACA +
Preference number: 4 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLRTQAL*LVSFLT
Trigger: TGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCG...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCGCTGCACCTCTTCCTTaGACCAGTCTCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPAAPLP*TSLTWP
Trigger: AGGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGC...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCTGCACCTCTTCCTTaGACCAGTCTCACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRAAPLP*TSLTWP
Trigger: AGGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGC...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCTCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPSQALS*SSSESE
Trigger: CTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGA...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR GCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGATCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRSQALS*SSSESE
Trigger: CTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGA...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp TTGTTGAAGCTGCTGGCCACCAGCAATGATAGGATCCAATGGCGAGTTGGGCCGCTTCCCCATAGATGTTaGAGATATGAATGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLKLLATSNDRIQWRVGPLPHRC*RYECSQ
Trigger: CTGACTACATTCATATCTGCAACATCTATGGGGAAG...CGGCCCAACTCGCCATTGGATCCTATCATTGCTGGTGGCCAGCAGCTTCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGGTCGTGATGCTTCCATaGCTTCTCGGCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLVVMLP*LLGWKS
Trigger: GCTTTTCCAGCCGAGAAGGCATGGAAGCATCACGAC...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp GGAGGAGGCAGAGAATATGCTGAGAATTCACCCTACACAGAACTGGAGGTCAGATGTAGTCAGACCAGCTaGAGTACAGGAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GGGREYAENSPYTELEVRCSQTS*STGSGF
Trigger: GAAACCACTTCCTGTACTCCAGCTGGTCTGACTACA...TCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGAGACTGCGATaGAGAAGACAGCAAAGCGAC +
Preference number: 4 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLLRRLR*RRQQSD
Trigger: GTCGCTTTGCTGTCTTCTCCATCGCAGTCTCCTCAG...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCAGAGAACAGGATTTaGGAGCTTATGTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: THPVHPRRPQKERSRYTWPENRI*ELMSAK
Trigger: CTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGG...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGGTTCATGTCAGACTCTaGCATGTCATCCTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: THPVHPRRPQKERSRYTWVHVRL*HVILEV
Trigger: TACTTCCAGGATGACATGCCAGAGTCTGACATGAAC...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp GGAGGAGGCAGAGAATATGCTGAGAATTCACCCTACACAGAACTGGAGGTCAGAATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGGREYAENSPYTELEVRIPPVS*SHCIPA
Trigger: AGCTGGAATACAATGAGATCAAGACACAGGTGGGAT...TCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCCTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR TCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAAATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQIPPVS*SHCIPA
Trigger: AGCTGGAATACAATGAGATCAAGACACAGGTGGGAT...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR TCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAAGAGAGTAGGTATCAGTaGAGCTTAGATCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQESRYQ*SLDHWA
Trigger: TGCCCAATGATCTAAGCTTCACTGATACCTACTCTC...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACCAATCTAACTCTCAGTGTGAAGACCTGGGCAAAGGGTACTGCTAATGGGTCCCTTGGCAAGCAGACATaGAGATTTGACCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: TNLTLSVKTWAKGTANGSLGKQT*RFDHLC
Trigger: GCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAG...GGACCCATTAGCAGTACCCTTTGCCCAGGTCTTCACACTGAGAGTTAGATTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACTCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHSQALS*SSSESE
Trigger: CTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGA...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR GCA 90 bp CCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACCTCTGGTGTAACATCTaGGGAAAACTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PIPLRPVFSLQSPSMRADLWCNI*GKLCCS
Trigger: GCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGAG...GTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACGTCGATCCCACACTTTaGAGATGGCATCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHVDPTL*RWHRLP
Trigger: GGGGAGACGATGCCATCTGCAAAGTGTGGGATCGAC...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCGTCGTGATGCTTCCATaGCTTCTCGGCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPVVMLP*LLGWKS
Trigger: GCTTTTCCAGCCGAGAAGGCATGGAAGCATCACGAC...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGGAGTCCGAGAGGGCCTaGATGAGCTGTAAATTTGCT +
Preference number: 4 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLESERA*MSCKFA
Trigger: AGCAAATTTACAGCTCATCCAGGCCCTCTCGGACTC...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CCA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAACCAGAGAACAGGATTTaGGAGCTTATGTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQPENRI*ELMSAK
Trigger: CTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGG...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGGATCATCCTCCCTCATaGTTCGTCGATCCCACACTT +
Preference number: 4 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLDHPPS*FVDPTL
Trigger: AAGTGTGGGATCGACGAACCATGAGGGAGGATGATC...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCTGGAAGTACTCAGCTTaGCGGTACTGCCACAGACGT +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPWKYSA*RYCHRR
Trigger: ACGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCA...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGTCTCACTTGGCCTCTaGGCCAGATCCACATCTTCA +
Preference number: 4 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRVSLGL*ARSTSS
Trigger: TGAAGATGTGGATCTGGCCCAGAGGCCAAGTGAGAC...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR TCA 90 bp GTGAAAGAAGTCCTGTTTTATCCTCTTTTGTTGAAGCTGCTGGCCACCAGCAATCGCACACAGGCCTTGTaGTTGGTCAGCTTCTTAACA +
Preference number: 4 (lower is better)
Translates to: VKEVLFYPLLLKLLATSNRTQAL*LVSFLT
Trigger: TGTTAAGAAGCTGACCAATCACAAGGCCTGTGTGCG...ATTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAACAGGACTTCTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGCATCCCACGAACTGCTaGCAATCTTTTCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLHPTNC*QSFLQR
Trigger: CCTTTGAAGAAAAGATTGTCAGCAGTTCGTGGGATG...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCCTCTGGTGTAACATCTaGGGAAAACTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPLWCNI*GKLCCS
Trigger: GCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGAG...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGACTGGAGTACAGGAAGTaGTTTCCATCAGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRLEYRK*FPSGVK
Trigger: CTTCACCCCTGATGGAAACCACTTCCTGTACTCCAG...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
3UTR CAA 72 bp TCGGATCGTCTGATCTTGGCAAGCAGACATGAAGATTaGACCATCTTTGCTGTAGATGCCGCAGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SDRLILASRHED*TIFAVDAAESL
Trigger: AAGGCTTTCTGCGGCATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR GCA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGACATCTTTGCTGTAGATaGCGCAGAAAGCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRHLCCR*RRKPSE
Trigger: CTCAGAAGGCTTTCTGCGGCATCTACAGCAAAGATG...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCCATCTTTGCTGTAGATaGCGCAGAAAGCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPHLCCR*RRKPSE
Trigger: CTCAGAAGGCTTTCTGCGGCATCTACAGCAAAGATG...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACGAGTCCGAGAGGGCCTaGATGAGCTGTAAATTTGCT +
Preference number: 4 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHESERA*MSCKFA
Trigger: AGCAAATTTACAGCTCATCCAGGCCCTCTCGGACTC...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CCA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCTGGAGTACAGGAAGTaGTTTCCATCAGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHLEYRK*FPSGVK
Trigger: CTTCACCCCTGATGGAAACCACTTCCTGTACTCCAG...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCTGTAGTCAGACCAGCTaGAGTACAGGAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPCSQTS*STGSGF
Trigger: GAAACCACTTCCTGTACTCCAGCTGGTCTGACTACA...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp CCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACCCAGAGAACAGGATTTaGGAGCTTATGTCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PIPLRPVFSLQSPSMRADPENRI*ELMSAK
Trigger: CTTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGG...GTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp TTGGTCAGCTTCTTAACAATGTGGCCGCTCAAGAGGTCATATACAACCACTTTGATCCCACCTGTGTCTTaGTCTCATTGTATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LVSFLTMWPLKRSYTTTLIPPVS*SHCIPA
Trigger: AGCTGGAATACAATGAGATCAAGACACAGGTGGGAT...CAAAGTGGTTGTATATGACCTCTTGAGCGGCCACATTGTTAAGAAGCTGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143375.8
CDS-3UTR TCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCGAGAGTAGGTATCAGTaGAGCTTAGATCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPESRYQ*SLDHWA
Trigger: TGCCCAATGATCTAAGCTTCACTGATACCTACTCTC...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCGTTCATGTCAGACTCTaGCATGTCATCCTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPVHVRL*HVILEV
Trigger: TACTTCCAGGATGACATGCCAGAGTCTGACATGAAC...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR TCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCCAAAGCTTAATGGTCTaGTCTTTGGAGTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPQSLMV*SLELEM
Trigger: CATCTCCAACTCCAAAGATCAGACCATTAAGCTTTG...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR GCA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCCTTCCCCATAGATGTTaGAGATATGAATGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPLPHRC*RYECSQ
Trigger: CTGACTACATTCATATCTGCAACATCTATGGGGAAG...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGAGTGCACCCACAGGCTaGGGATCATCCTCCCTCATG +
Preference number: 5 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLSAPTG*GSSSLM
Trigger: CATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACT...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCCTGGAAGTACTCAGCTaGGCGGTACTGCCACAGACG +
Preference number: 5 (lower is better)
Translates to: PSLGVVSPGSAWAQTLGFLEVLS*AVLPQT
Trigger: CGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAG...GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGTGTGTCTTGATCTCATaGTATTCCAGCTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLCVLIS*YSSSRV
Trigger: CACCCGGGAGCTGGAATACAATGAGATCAAGACACA...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS GCA 90 bp GGTGGGTTATATCGATCTCCAAGGCGACCATCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAGAGGGCCTGCGGAGGAGATAGGCCA +
Preference number: 5 (lower is better)
Translates to: GGLYRSPRRPSQALS*SSSESERACGGDRP
Trigger: TGGCCTATCTCCTCCGCAGGCCCTCTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGATGGTCGCCTTGGAGATCGATATAACCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117701.8
CDS-3UTR CAA 90 bp CTCACCCAGTGTGAGCAGTTCCTCCACGTACTCCCCAGAAGGGGAAAGGGAGGATGCTGCACCTCTTCCTaGCACCAGTCTCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: LTQCEQFLHVLPRRGKGGCCTSS*HQSHLA
Trigger: GGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGCA...TCCTCCCTTTCCCCTTCTGGGGAGTACGTGGAGGAACTGCTCACACTGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CAA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCCGTCGATCCCACACTTaGCAGATGGCATCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSRRSHT*QMASSP
Trigger: GGGAGACGATGCCATCTGCAAAGTGTGGGATCGACG...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CTCACCCAGTGTGAGCAGTTCCTCCACGTACTCCCCAGAAGGGGAAAGGGAGGACGTCGATCCCACACTTaGCAGATGGCATCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LTQCEQFLHVLPRRGKGGRRSHT*QMASSP
Trigger: GGGAGACGATGCCATCTGCAAAGTGTGGGATCGACG...TCCTCCCTTTCCCCTTCTGGGGAGTACGTGGAGGAACTGCTCACACTGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CAGGAGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCGTCGATCCCACACTTaGCAGATGGCATCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: QEVAEANTSLPILSTLEDRRSHT*QMASSP
Trigger: GGGAGACGATGCCATCTGCAAAGTGTGGGATCGACG...GTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp ACTTGGCCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGTCATATACAACCACTTaGCCAGTAGAGCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: TWPSLGVVSPGSAWAQTLSYTTT*PVEQPL
Trigger: CAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGA...CAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGGCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCATGCTGCACCTCTTCCTaGCACCAGTCTCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: RLLRQTPPYPSCPPSKTSCCTSS*HQSHLA
Trigger: GGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGCA...TGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CAA 90 bp AGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTGTGTCTTGATCTCATaGTATTCCAGCTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: SLGVVSPGSAWAQTLGFCCVLIS*YSSSRV
Trigger: CACCCGGGAGCTGGAATACAATGAGATCAAGACACA...ACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR CAA 90 bp CCCAGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCAAGAGTACGCCGGTTTaGTTCTCGGTCAAAGACATA +
Preference number: 5 (lower is better)
Translates to: PSLGVVSPGSAWAQTLGFKSTPV*FSVKDI
Trigger: TATGTCTTTGACCGAGAACAAAACCGGCGTACTCTT...GAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTCGGATCGTCTGATCTaGGCAAGCAGACATGAAGAT +
Preference number: 5 (lower is better)
Translates to: SLGVVSPGSAWAQTLGFCSDRLI*ASRHED
Trigger: ATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGA...ACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AGTTTGGGGGTGGTCAGTCCAGGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTCGAGCCTTGATGCTTTaGAATTTGTGGAATCGGCCA +
Preference number: 5 (lower is better)
Translates to: SLGVVSPGSAWAQTLGFCRALML*NLWNRP
Trigger: TGGCCGATTCCACAAATTCAAAAGCATCAAGGCTCG...ACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCCTGGACTGACCACCCCCAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS CCA 90 bp CCATCCCAGGCACTGTCATGCTCTTCCTCTGAGTCCGAGAGGGCCTaGATGAGCTGTAAATTTGCTGCACCTCTTCCTTGCACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: PSQALSCSSSESERA*MSCKFAAPLPCTSL
Trigger: GAGACTGGTGCAAGGAAGAGGTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150481.8
CDS-3UTR CAA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTTGCTGCACCTCTTCCTaGCACCAGTCTCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGCCTSS*HQSHLA
Trigger: GGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGCA...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CAA 90 bp TCGATCCCACACTTTGCAGATGGCATCGTCTCCCCCAGAGAACAGGATTTGGGATGCTGCACCTCTTCCTaGCACCAGTCTCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: SIPHFADGIVSPREQDLGCCTSS*HQSHLA
Trigger: GGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGCA...TCCCAAATCCTGTTCTCTGGGGGAGACGATGCCATCTGCAAAGTGTGGGATCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CAA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTCCTACATCCCGAGCCTaGATGCTTTTGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSPTSRA*MLLNLW
Trigger: CCACAAATTCAAAAGCATCAAGGCTCGGGATGTAGG...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCGTCGATCCCACACTTaGCAGATGGCATCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGRRSHT*QMASSP
Trigger: GGGAGACGATGCCATCTGCAAAGTGTGGGATCGACG...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCAAAGTGCACCCACAGGCTaGGGATCATCCTCCCTCATG +
Preference number: 5 (lower is better)
Translates to: GTPDNGCPATLWLEIEIQSAPTG*GSSSLM
Trigger: CATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACT...TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp TCAGAGTGTGAAGCACTCCATGGCCTCTGTAGGTCATCAAGGAGCTGTCACCTGTTGCACCAGTCTCACTaGGCCTCTGGGCCAGATCCA +
Preference number: 5 (lower is better)
Translates to: SECEALHGLCRSSRSCHLLHQSH*ASGPDP
Trigger: TGGATCTGGCCCAGAGGCCAAGTGAGACTGGTGCAA...CAGGTGACAGCTCCTTGATGACCTACAGAGGCCATGGAGTGCTTCACACTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS TCA 90 bp CCCAGGCACTGTCATGCTCTTCCTCTGAGTCCGAGAGGGCCTGGATaGGCTGTAAATTTGCTGCACCTCTTCCTTGCACCAGTCTCACTT +
Preference number: 5 (lower is better)
Translates to: PRHCHALPLSPRGPG*AVNLLHLFLAPVSL
Trigger: AAGTGAGACTGGTGCAAGGAAGAGGTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150481.8
CDS GCA 90 bp TCCGAGAGGGCCTGGATGAGCTGTAAATTTGCTGCACCTCTTCCTTaGACCAGTCTCACTTGGCCTCTGGGCCAGATCCACATCTTCATC +
Preference number: 5 (lower is better)
Translates to: SERAWMSCKFAAPLP*TSLTWPLGQIHIFI
Trigger: GATGAAGATGTGGATCTGGCCCAGAGGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CAA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCCCCAGAGAACAGGATTaGGGAGCTTATGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSPREQD*GAYVSK
Trigger: TTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGGG...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp TCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTTCCTCATATACAACCACTTaGCCAGTAGAGCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: SAWAQTLGFCFSPSVSSSSYTTT*PVEQPL
Trigger: CAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGA...GGAACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CAGGAGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACTCATATACAACCACTTaGCCAGTAGAGCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: QEVAEANTSLPILSTLEDSYTTT*PVEQPL
Trigger: CAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGA...GTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS GCA 90 bp GGTGGGTTATATCGATCTCCAAGGCGACCATCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAGAGGGCCTGGATGAGCTGTAAATTT +
Preference number: 5 (lower is better)
Translates to: GGLYRSPRRPSQALS*SSSESERAWMSCKF
Trigger: AAATTTACAGCTCATCCAGGCCCTCTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGATGGTCGCCTTGGAGATCGATATAACCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150481.8
CDS-3UTR CAA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAATGCTGCACCTCTTCCTaGCACCAGTCTCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQCCTSS*HQSHLA
Trigger: GGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGCA...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CAA 90 bp GGAGGAGGCAGAGAATATGCTGAGAATTCACCCTACACAGAACTGGAGGTCAGAAGTGCACCCACAGGCTaGGGATCATCCTCCCTCATG +
Preference number: 5 (lower is better)
Translates to: GGGREYAENSPYTELEVRSAPTG*GSSSLM
Trigger: CATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACT...TCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAACTGGAAGTACTCAGCTaGGCGGTACTGCCACAGACG +
Preference number: 5 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQLEVLS*AVLPQT
Trigger: CGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAG...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GGAGGAGGCAGAGAATATGCTGAGAATTCACCCTACACAGAACTGGAGGTCAGACTGGAAGTACTCAGCTaGGCGGTACTGCCACAGACG +
Preference number: 5 (lower is better)
Translates to: GGGREYAENSPYTELEVRLEVLS*AVLPQT
Trigger: CGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAG...TCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAAATCCCACCTGTGTCTaGATCTCATTGTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: RLLRQTPPYPSCPPSKTSNPTCV*ISLYSS
Trigger: GCTGGAATACAATGAGATCAAGACACAGGTGGGATT...TGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR CAA 90 bp GCTGCCAGCGATAGTCCCAGTTTTGCTGTGTGGCAGCCAGTCGTGATGCTTCCAAATCCCACCTGTGTCTaGATCTCATTGTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: AASDSPSFAVWQPVVMLPNPTCV*ISLYSS
Trigger: GCTGGAATACAATGAGATCAAGACACAGGTGGGATT...TGGAAGCATCACGACTGGCTGCCACACAGCAAAACTGGGACTATCGCTGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143375.8
CDS-3UTR CAA 90 bp GGCTCAGCCTGGGCCCAGACCCTGGGTTTCTGTTTCTCACCCAGTGTGAGCAGTAGCAGACATGAAGATTaGACCATCTTTGCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: GSAWAQTLGFCFSPSVSSSRHED*TIFAVD
Trigger: ATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCT...ACTGCTCACACTGGGTGAGAAACAGAAACCCAGGGTCTGGGCCCAGGCTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGATCGGATCGTCTGATCTaGGCAAGCAGACATGAAGAT +
Preference number: 5 (lower is better)
Translates to: LRQTPPYPSCPPSKTSERSDRLI*ASRHED
Trigger: ATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGA...TCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTACGAGCCTTGATGCTTTaGAATTTGTGGAATCGGCCA +
Preference number: 5 (lower is better)
Translates to: PPYPSCPPSKTSERKVSVRALML*NLWNRP
Trigger: TGGCCGATTCCACAAATTCAAAAGCATCAAGGCTCG...TACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGATATAGGCAGCCATCATaGGCTCCTCCTAGTACTTCT +
Preference number: 5 (lower is better)
Translates to: LRQTPPYPSCPPSKTSERYRQPS*APPSTS
Trigger: AGAAGTACTAGGAGGAGCCAATGATGGCTGCCTATA...TCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp ACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGTGCACCCACAGGCTaGGGATCATCCTCCCTCATG +
Preference number: 5 (lower is better)
Translates to: TSKSKYESRHSSHPRRLLSAPTG*GSSSLM
Trigger: CATGAGGGAGGATGATCCCAAGCCTGTGGGTGCACT...CAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTAAATCCCACCTGTGTCTaGATCTCATTGTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: PPYPSCPPSKTSERKVSVNPTCV*ISLYSS
Trigger: GCTGGAATACAATGAGATCAAGACACAGGTGGGATT...TACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR CAA 90 bp CTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAATCCCACCTGTGTCTaGATCTCATTGTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: LRQTPPYPSCPPSKTSERNPTCV*ISLYSS
Trigger: GCTGGAATACAATGAGATCAAGACACAGGTGGGATT...TCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR CAA 90 bp CAGGAGGTTGCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACAGCAGACATGAAGATTaGACCATCTTTGCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: QEVAEANTSLPILSTLEDSRHED*TIFAVD
Trigger: ATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCT...GTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGCAACCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCAATCGGATCGTCTGATCTaGGCAAGCAGACATGAAGAT +
Preference number: 5 (lower is better)
Translates to: GTPDNGCPATLWLEIEIQSDRLI*ASRHED
Trigger: ATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGA...TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GGCACCCCAGATAATGGATGCCCTGCCACACTCTGGCTAGAGATCGAAATCCAATATAGGCAGCCATCATaGGCTCCTCCTAGTACTTCT +
Preference number: 5 (lower is better)
Translates to: GTPDNGCPATLWLEIEIQYRQPS*APPSTS
Trigger: AGAAGTACTAGGAGGAGCCAATGATGGCTGCCTATA...TTGGATTTCGATCTCTAGCCAGAGTGTGGCAGGGCATCCATTATCTGGGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGCCCAGAGAACAGGATTaGGGAGCTTATGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SCPPSKTSERKVSVYLALPREQD*GAYVSK
Trigger: TTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGGG...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCCCAGAGAACAGGATTaGGGAGCTTATGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGPREQD*GAYVSK
Trigger: TTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGGG...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGTCATATACAACCACTTaGCCAGTAGAGCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: SCPPSKTSERKVSVYLALSYTTT*PVEQPL
Trigger: CAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGA...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGTTGCACCAGTCTCACTaGGCCTCTGGGCCAGATCCA +
Preference number: 5 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLLHQSH*ASGPDP
Trigger: TGGATCTGGCCCAGAGGCCAAGTGAGACTGGTGCAA...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS-3UTR CAA 90 bp GCTGAGGCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAGCAGACATGAAGATTaGACCATCTTTGCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: AEANTSLPILSTLEDLRKSRHED*TIFAVD
Trigger: ATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCT...CTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGCCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTTCGGATCGTCTGATCTaGGCAAGCAGACATGAAGAT +
Preference number: 5 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPSDRLI*ASRHED
Trigger: ATCTTCATGTCTGCTTGCCAAGATCAGACGATCCGA...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCGAGCCTTGATGCTTTaGAATTTGTGGAATCGGCCA +
Preference number: 5 (lower is better)
Translates to: THPVHPRRPQKERSRYTWRALML*NLWNRP
Trigger: TGGCCGATTCCACAAATTCAAAAGCATCAAGGCTCG...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTCCTACATCCCGAGCCTaGATGCTTTTGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPPTSRA*MLLNLW
Trigger: CCACAAATTCAAAAGCATCAAGGCTCGGGATGTAGG...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp ACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCTACATCCCGAGCCTaGATGCTTTTGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: THPVHPRRPQKERSRYTWPTSRA*MLLNLW
Trigger: CCACAAATTCAAAAGCATCAAGGCTCGGGATGTAGG...CCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTTATAGGCAGCCATCATaGGCTCCTCCTAGTACTTCT +
Preference number: 5 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPYRQPS*APPSTS
Trigger: AGAAGTACTAGGAGGAGCCAATGATGGCTGCCTATA...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp ACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCCTGGAAGTACTCAGCTaGGCGGTACTGCCACAGACG +
Preference number: 5 (lower is better)
Translates to: TSLFTSKSKYESRHSSHPLEVLS*AVLPQT
Trigger: CGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAG...GGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CGGTTTTGTTCTCGGTCAAAGACATATAGGCAGCCATCATTGGCTCCTCCTAGTTGTGTCTTGATCTCATaGTATTCCAGCTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: RFCSRSKTYRQPSLAPPSCVLIS*YSSSRV
Trigger: CACCCGGGAGCTGGAATACAATGAGATCAAGACACA...ACTAGGAGGAGCCAATGATGGCTGCCTATATGTCTTTGACCGAGAACAAAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143375.8
CDS-3UTR CAA 90 bp AACACACTCAAGACTCTTGTAGCCAGAAGCGGCACCCCAGATAATGGATGCCCTAATCCCACCTGTGTCTaGATCTCATTGTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: NTLKTLVARSGTPDNGCPNPTCV*ISLYSS
Trigger: GCTGGAATACAATGAGATCAAGACACAGGTGGGATT...AGGGCATCCATTATCTGGGGTGCCGCTTCTGGCTACAAGAGTCTTGAGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR CAA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAACGAGCCTTGATGCTTTaGAATTTGTGGAATCGGCCA +
Preference number: 5 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQRALML*NLWNRP
Trigger: TGGCCGATTCCACAAATTCAAAAGCATCAAGGCTCG...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTAAGAGTACGCCGGTTTaGTTCTCGGTCAAAGACATA +
Preference number: 5 (lower is better)
Translates to: KHLPTHPVHPRRPQKERSKSTPV*FSVKDI
Trigger: TATGTCTTTGACCGAGAACAAAACCGGCGTACTCTT...AGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GGAGGAGGCAGAGAATATGCTGAGAATTCACCCTACACAGAACTGGAGGTCAGACCCAGAGAACAGGATTaGGGAGCTTATGTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: GGGREYAENSPYTELEVRPREQD*GAYVSK
Trigger: TTTGCTGACATAAGCTCCCAAATCCTGTTCTCTGGG...TCTGACCTCCAGTTCTGTGTAGGGTGAATTCTCAGCATATTCTCTGCCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCGTCGATCCCACACTTaGCAGATGGCATCGTCTCCC +
Preference number: 5 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHRRSHT*QMASSP
Trigger: GGGAGACGATGCCATCTGCAAAGTGTGGGATCGACG...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCTGGAAGTACTCAGCTaGGCGGTACTGCCACAGACG +
Preference number: 5 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHLEVLS*AVLPQT
Trigger: CGTCTGTGGCAGTACCGCCAAGCTGAGTACTTCCAG...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS TCA 90 bp CTTTGCTGTAGATGCCGCAGAAAGCCTTCTGAGAGTAGGTATCAGTaGAGCTTAGATCATTGGGCAAGAAGCTGGTGTAACATCTGCGGA +
Preference number: 5 (lower is better)
Translates to: LCCRCRRKPSESRYQ*SLDHWARSWCNICG
Trigger: TCCGCAGATGTTACACCAGCTTCTTGCCCAATGATCTAAGCTTCACTGATACCTACTCTCAGAAGGCTTTCTGCGGCATCTACAGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117701.8
CDS-3UTR CAA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGTGTGTCTTGATCTCATaGTATTCCAGCTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLCVLIS*YSSSRV
Trigger: CACCCGGGAGCTGGAATACAATGAGATCAAGACACA...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
CDS-3UTR CAA 90 bp TCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTCTCGGTATACTTGGCCCTGAGCAGACATGAAGATTaGACCATCTTTGCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: SCPPSKTSERKVSVYLALSRHED*TIFAVD
Trigger: ATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCT...CAGGGCCAAGTATACCGAGACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GCAAACACCTCCCTACCCATCCTGTCCACCCTCGAAGACCTCAGAAAGAAAGGTAGCAGACATGAAGATTaGACCATCTTTGCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: ANTSLPILSTLEDLRKKGSRHED*TIFAVD
Trigger: ATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCT...ACCTTTCTTTCTGAGGTCTTCGAGGGTGGACAGGATGGGTAGGGAGGTGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp AAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGCTGAGGCAAAAGAGTACGCCGGTTTaGTTCTCGGTCAAAGACATA +
Preference number: 5 (lower is better)
Translates to: KSKYESRHSSHPRRLLRQKSTPV*FSVKDI
Trigger: TATGTCTTTGACCGAGAACAAAACCGGCGTACTCTT...TTGCCTCAGCAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GTGAAAGAAGTCCTGTTTTATCCTCTTTTGTTGAAGCTGCTGGCCACCAGCAATTGTGTCTTGATCTCATaGTATTCCAGCTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: VKEVLFYPLLLKLLATSNCVLIS*YSSSRV
Trigger: CACCCGGGAGCTGGAATACAATGAGATCAAGACACA...ATTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAACAGGACTTCTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACTCATATACAACCACTTaGCCAGTAGAGCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: PIPLRPVFSLQSPSMRADSYTTT*PVEQPL
Trigger: CAGTGGCTGCTCTACTGGCAAAGTGGTTGTATATGA...GTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp GTGAAAGAAGTCCTGTTTTATCCTCTTTTGTTGAAGCTGCTGGCCACCAGCAATCCTACATCCCGAGCCTaGATGCTTTTGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: VKEVLFYPLLLKLLATSNPTSRA*MLLNLW
Trigger: CCACAAATTCAAAAGCATCAAGGCTCGGGATGTAGG...ATTGCTGGTGGCCAGCAGCTTCAACAAAAGAGGATAAAACAGGACTTCTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGATATAGGCAGCCATCATaGGCTCCTCCTAGTACTTCT +
Preference number: 5 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRYRQPS*APPSTS
Trigger: AGAAGTACTAGGAGGAGCCAATGATGGCTGCCTATA...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp TTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCCAGGAGGTTGAAGAGTACGCCGGTTTaGTTCTCGGTCAAAGACATA +
Preference number: 5 (lower is better)
Translates to: FTSKSKYESRHSSHPRRLKSTPV*FSVKDI
Trigger: TATGTCTTTGACCGAGAACAAAACCGGCGTACTCTT...CAACCTCCTGGGGTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CTGAGACCCATACCTCTCAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAAATCCCACCTGTGTCTaGATCTCATTGTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: LRPIPLRPVFSLQSPSMRNPTCV*ISLYSS
Trigger: GCTGGAATACAATGAGATCAAGACACAGGTGGGATT...TCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTGAGAGGTATGGGTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000128490.9
CDS-3UTR CAA 90 bp CAGACCAGTCTTTTCACTTCAAAGTCCAAGTATGAGAGCAGACATAGTTCTCACCCTACATCCCGAGCCTaGATGCTTTTGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: QTSLFTSKSKYESRHSSHPTSRA*MLLNLW
Trigger: CCACAAATTCAAAAGCATCAAGGCTCGGGATGTAGG...GTGAGAACTATGTCTGCTCTCATACTTGGACTTTGAAGTGAAAAGACTGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000117701.8
ENSMUST00000121622.8
ENSMUST00000128490.9
CDS GCA 72 bp TATCGATCTCCAAGGCGACCATCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAGAGGGCCTGCGGAGGA +
Preference number: 6 (lower is better)
Translates to: YRSPRRPSQALS*SSSESERACGG
Trigger: TCCTCCGCAGGCCCTCTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGATGGTCGCCTTGGAGATCGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117701.8
CDS GCA 72 bp TATCGATCTCCAAGGCGACCATCCCAGGCACTGTCATaGTCTTCCTCTGAGTCCGAGAGGGCCTGGATGAGC +
Preference number: 6 (lower is better)
Translates to: YRSPRRPSQALS*SSSESERAWMS
Trigger: GCTCATCCAGGCCCTCTCGGACTCAGAGGAAGAGCATGACAGTGCCTGGGATGGTCGCCTTGGAGATCGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150481.8
CDS GCA 72 bp GCCTGGATGAGCTGTAAATTTGCTGCACCTCTTCCTTaGACCAGTCTCACTTGGCCTCTGGGCCAGATCCAC +
Preference number: 6 (lower is better)
Translates to: AWMSCKFAAPLP*TSLTWPLGQIH
Trigger: GTGGATCTGGCCCAGAGGCCAAGTGAGACTGGTGCAAGGAAGAGGTGCAGCAAATTTACAGCTCATCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000150019.8
ENSMUST00000152681.8
CDS TCA 72 bp TGTCATGCTCTTCCTCTGAGTCCGAGAGGGCCTGGATaGGCTGTAAATTTGCTGCACCTCTTCCTTGCACCA +
Preference number: 6 (lower is better)
Translates to: CHALPLSPRGPG*AVNLLHLFLAP
Trigger: TGGTGCAAGGAAGAGGTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGGACTCAGAGGAAGAGCATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000072530.11
ENSMUST00000117236.8
ENSMUST00000121622.8
ENSMUST00000128490.9
ENSMUST00000143375.8
ENSMUST00000150481.8
CDS GCA 72 bp AGCTTAGATCATTGGGCAAGAAGCTGGTGTAACATCTaGGGAAAACTCTGCTGCAGCGCAGTCCTCCGAAGT +
Preference number: 6 (lower is better)
Translates to: SLDHWARSWCNI*GKLCCSAVLRS
Trigger: ACTTCGGAGGACTGCGCTGCAGCAGAGTTTTCCGCAGATGTTACACCAGCTTCTTGCCCAATGATCTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117701.8
CDS TCA 72 bp AGATGCCGCAGAAAGCCTTCTGAGAGTAGGTATCAGTaGAGCTTAGATCATTGGGCAAGAAGCTGGTGTAAC +
Preference number: 6 (lower is better)
Translates to: RCRRKPSESRYQ*SLDHWARSWCN
Trigger: GTTACACCAGCTTCTTGCCCAATGATCTAAGCTTCACTGATACCTACTCTCAGAAGGCTTTCTGCGGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117701.8