RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DBX1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030507

Ensembl transcript IDs: ENSMUST00000032717.7

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTCTGTTGTGAGAAGAGGCAGGATCCAGGATCCTGAACAGAGGTaGCCACGTGGGCGTTCCCTCTCCAGTTTCCAATTGCAACAGCCC +
Preference number: 1 (lower is better)
Translates to: GSVVRRGRIQDPEQR*PRGRSLSSFQLQQP
Trigger: GGGCTGTTGCAATTGGAAACTGGAGAGGGAACGCCCACGTGGCCACCTCTGTTCAGGATCCTGGATCCTGCCTCTTCTCACAACAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR TCA 90 bp AGAAGGTGGTGGGTCTGTTGTGAGAAGAGGCAGGATCCAGGATCCTaGACAGAGGTGGCCACGTGGGCGTTCCCTCTCCAGTTTCCAATT +
Preference number: 1 (lower is better)
Translates to: RRWWVCCEKRQDPGS*TEVATWAFPLQFPI
Trigger: AATTGGAAACTGGAGAGGGAACGCCCACGTGGCCACCTCTGTTCAGGATCCTGGATCCTGCCTCTTCTCACAACAGACCCACCACCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 90 bp CCATCCAGGAAGTTAGGGGTCAGAGGCTTGGTGTTTGACAGGACCTaGCTCACAGTAAGCACTGGCAGTGGAACTAGGGACACCCCTCTA +
Preference number: 1 (lower is better)
Translates to: PSRKLGVRGLVFDRT*LTVSTGSGTRDTPL
Trigger: TAGAGGGGTGTCCCTAGTTCCACTGCCAGTGCTTACTGTGAGCCAGGTCCTGTCAAACACCAAGCCTCTGACCCCTAACTTCCTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 90 bp TACACAGTAGAGCACATCTCAGGTAAGCTGCCCAGACTGCAAAGCTaGGTGAAACGTGTCGGAGAGTCAGACAAGTCCACACCCCAGTGC +
Preference number: 1 (lower is better)
Translates to: YTVEHISGKLPRLQS*VKRVGESDKSTPQC
Trigger: GCACTGGGGTGTGGACTTGTCTGACTCTCCGACACGTTTCACCCAGCTTTGCAGTCTGGGCAGCTTACCTGAGATGTGCTCTACTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR TCA 90 bp GAATCTCCTGTGCTTTCTACTCTCAAGGTGAAAAGACAGGATGGCTaGCTGATACCCCCTGCAGAAAGGTGGCCATCCAGGAAGTTAGGG +
Preference number: 1 (lower is better)
Translates to: ESPVLSTLKVKRQDG*LIPPAERWPSRKLG
Trigger: CCCTAACTTCCTGGATGGCCACCTTTCTGCAGGGGGTATCAGTCAGCCATCCTGTCTTTTCACCTTGAGAGTAGAAAGCACAGGAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 90 bp GAAAAGGCTCCCGTTGGAGTAGCAGAAGGACATCAAGCAGAGCACTaGATACACATGTCTACAGAGAGAAATCGCTTCCTCCCGCCAAAG +
Preference number: 1 (lower is better)
Translates to: EKAPVGVAEGHQAEH*IHMSTERNRFLPPK
Trigger: CTTTGGCGGGAGGAAGCGATTTCTCTCTGTAGACATGTGTATCCAGTGCTCTGCTTGATGTCCTTCTGCTACTCCAACGGGAGCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 90 bp TTCAGAATCTCCTGTGCTTTCTACTCTCAAGGTGAAAAGACAGGATaGCTGACTGATACCCCCTGCAGAAAGGTGGCCATCCAGGAAGTT +
Preference number: 1 (lower is better)
Translates to: FRISCAFYSQGEKTG*LTDTPCRKVAIQEV
Trigger: AACTTCCTGGATGGCCACCTTTCTGCAGGGGGTATCAGTCAGCCATCCTGTCTTTTCACCTTGAGAGTAGAAAGCACAGGAGATTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR-3UTR TCA 90 bp TCTGGGACAACAGGAAGGGTGATGCCACCCCTGAGAAGGTGGTGGGTCTGTTGTCAGGATCCAGGATCCTaGACAGAGGTGGCCACGTGG +
Preference number: 2 (lower is better)
Translates to: SGTTGRVMPPLRRWWVCCQDPGS*TEVATW
Trigger: CCACGTGGCCACCTCTGTTCAGGATCCTGGATCCTG...ACAACAGACCCACCACCTTCTCAGGGGTGGCATCACCCTTCCTGTTGTCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CAA 90 bp CCCCCTGCAGAAAGGTGGCCATCCAGGAAGTTAGGGGTCAGAGGCTaGGTGTTTGACAGGACCTGGCTCACAGTAAGCACTGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: PPAERWPSRKLGVRG*VFDRTWLTVSTGSG
Trigger: TCCACTGCCAGTGCTTACTGTGAGCCAGGTCCTGTCAAACACCAAGCCTCTGACCCCTAACTTCCTGGATGGCCACCTTTCTGCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR-3UTR CCA 90 bp AAATGTCTCTGGGACAACAGGAAGGGTGATGCCACCCCTGAGAAGGTGGTGGGTGATCCTGAACAGAGGTaGCCACGTGGGCGTTCCCTC +
Preference number: 2 (lower is better)
Translates to: KCLWDNRKGDATPEKVVGDPEQR*PRGRSL
Trigger: GAGGGAACGCCCACGTGGCCACCTCTGTTCAGGATC...ACCCACCACCTTCTCAGGGGTGGCATCACCCTTCCTGTTGTCCCAGAGACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR-3UTR CCA 90 bp CTCACAGTAAGCACTGGCAGTGGAACTAGGGACACCCCTCTACACACACCCTGCCCCCTGAGAAGGTGGTaGGTCTGTTGTGAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: LTVSTGSGTRDTPLHTPCPLRRW*VCCEKR
Trigger: CCTCTTCTCACAACAGACCCACCACCTTCTCAGGGG...GCAGGGTGTGTGTAGAGGGGTGTCCCTAGTTCCACTGCCAGTGCTTACTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR-3UTR GCA 90 bp CACATGTCTACAGAGAGAAATCGCTTCCTCCCGCCAAAGGAGCATCAAGAAATGTCTCCAGTTTCCAATTaGAACAGCCCCAGAGCCGCT +
Preference number: 2 (lower is better)
Translates to: HMSTERNRFLPPKEHQEMSPVSN*NSPRAA
Trigger: AGCGGCTCTGGGGCTGTTGCAATTGGAAACTGGAGA...CATTTCTTGATGCTCCTTTGGCGGGAGGAAGCGATTTCTCTCTGTAGACATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR TCA 72 bp TGGGTCTGTTGTGAGAAGAGGCAGGATCCAGGATCCTaGACAGAGGTGGCCACGTGGGCGTTCCCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: WVCCEKRQDPGS*TEVATWAFPLQ
Trigger: CTGGAGAGGGAACGCCCACGTGGCCACCTCTGTTCAGGATCCTGGATCCTGCCTCTTCTCACAACAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR-3UTR CAA 90 bp CTGACTGATACCCCCTGCAGAAAGGTGGCCATCCAGGAAGTTAGGGGTCAGAGGCTCCCGTGGGAAGGGTaGTTTAGAGGTGGCAGCACG +
Preference number: 3 (lower is better)
Translates to: LTDTPCRKVAIQEVRGQRLPWEG*FRGGST
Trigger: CGTGCTGCCACCTCTAAACAACCCTTCCCACGGGAG...CCTCTGACCCCTAACTTCCTGGATGGCCACCTTTCTGCAGGGGGTATCAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR-3UTR CAA 90 bp GAGAGTCAGACAAGTCCACACCCCAGTGCCAGGAGCTGGCACTCTGAAAAGGCTTTAGGGGTCAGAGGCTaGGTGTTTGACAGGACCTGG +
Preference number: 3 (lower is better)
Translates to: ESQTSPHPSARSWHSEKALGVRG*VFDRTW
Trigger: CCAGGTCCTGTCAAACACCAAGCCTCTGACCCCTAA...AGCCTTTTCAGAGTGCCAGCTCCTGGCACTGGGGTGTGGACTTGTCTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR TCA 72 bp GACAAGTCCACACCCCAGTGCCAGGAGCTGGCACTCTaGAAAGGCTCCCGTTGGAGTAGCAGAAGGACATCA +
Preference number: 3 (lower is better)
Translates to: DKSTPQCQELAL*KGSRWSSRRTS
Trigger: TGATGTCCTTCTGCTACTCCAACGGGAGCCTTTTCAGAGTGCCAGCTCCTGGCACTGGGGTGTGGACTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 72 bp GTGAGAAGAGGCAGGATCCAGGATCCTGAACAGAGGTaGCCACGTGGGCGTTCCCTCTCCAGTTTCCAATTG +
Preference number: 3 (lower is better)
Translates to: VRRGRIQDPEQR*PRGRSLSSFQL
Trigger: CAATTGGAAACTGGAGAGGGAACGCCCACGTGGCCACCTCTGTTCAGGATCCTGGATCCTGCCTCTTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 72 bp ACAACAGGAAGGGTGATGCCACCCCTGAGAAGGTGGTaGGTCTGTTGTGAGAAGAGGCAGGATCCAGGATCC +
Preference number: 3 (lower is better)
Translates to: TTGRVMPPLRRW*VCCEKRQDPGS
Trigger: GGATCCTGGATCCTGCCTCTTCTCACAACAGACCCACCACCTTCTCAGGGGTGGCATCACCCTTCCTGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 72 bp AAGTTAGGGGTCAGAGGCTTGGTGTTTGACAGGACCTaGCTCACAGTAAGCACTGGCAGTGGAACTAGGGAC +
Preference number: 3 (lower is better)
Translates to: KLGVRGLVFDRT*LTVSTGSGTRD
Trigger: GTCCCTAGTTCCACTGCCAGTGCTTACTGTGAGCCAGGTCCTGTCAAACACCAAGCCTCTGACCCCTAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 72 bp GAGCACATCTCAGGTAAGCTGCCCAGACTGCAAAGCTaGGTGAAACGTGTCGGAGAGTCAGACAAGTCCACA +
Preference number: 3 (lower is better)
Translates to: EHISGKLPRLQS*VKRVGESDKST
Trigger: TGTGGACTTGTCTGACTCTCCGACACGTTTCACCCAGCTTTGCAGTCTGGGCAGCTTACCTGAGATGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 72 bp TCCTGTGCTTTCTACTCTCAAGGTGAAAAGACAGGATaGCTGACTGATACCCCCTGCAGAAAGGTGGCCATC +
Preference number: 3 (lower is better)
Translates to: SCAFYSQGEKTG*LTDTPCRKVAI
Trigger: GATGGCCACCTTTCTGCAGGGGGTATCAGTCAGCCATCCTGTCTTTTCACCTTGAGAGTAGAAAGCACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR-3UTR CAA 90 bp CCGCCAAAGGAGCATCAAGAAATGAAAAGCTTGCTTGATAGTGCTTTCCCCTTACTCTCCAGTTTCCAATaGCAACAGCCCCAGAGCCGC +
Preference number: 3 (lower is better)
Translates to: PPKEHQEMKSLLDSAFPLLSSFQ*QQPQSR
Trigger: GCGGCTCTGGGGCTGTTGCAATTGGAAACTGGAGAG...TAAGGGGAAAGCACTATCAAGCAAGCTTTTCATTTCTTGATGCTCCTTTGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CCA 72 bp CCCGTTGGAGTAGCAGAAGGACATCAAGCAGAGCACTaGATACACATGTCTACAGAGAGAAATCGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: PVGVAEGHQAEH*IHMSTERNRFL
Trigger: GAGGAAGCGATTTCTCTCTGTAGACATGTGTATCCAGTGCTCTGCTTGATGTCCTTCTGCTACTCCAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR GCA 90 bp AAGTTAGGGGTCAGAGGCTTGGTGTTTGACAGGACCTGGCTCACAGTAAGCACTCAGAGAACACGGCTCTaGGCAGCATGCCCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: KLGVRGLVFDRTWLTVSTQRTRL*AACPGE
Trigger: CTCGCCGGGGCATGCTGCGCAGAGCCGTGTTCTCTG...AGTGCTTACTGTGAGCCAGGTCCTGTCAAACACCAAGCCTCTGACCCCTAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR GCA 90 bp AAATGTCTCTGGGACAACAGGAAGGGTGATGCCACCCCTGAGAAGGTGGTGGGTTTGGGAGGAGGGCTCTaGAGCAAAGCGGGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: KCLWDNRKGDATPEKVVGLGGGL*SKAGEV
Trigger: AACTTCGCCCGCTTTGCTGCAGAGCCCTCCTCCCAA...ACCCACCACCTTCTCAGGGGTGGCATCACCCTTCCTGTTGTCCCAGAGACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CCA 90 bp GGAAGGGTGATGCCACCCCTGAGAAGGTGGTGGGTCTGTTGTGAGAAGAGGCAGCGAGCCTTCGAAGTATaGAAAGGCGAACGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GRVMPPLRRWWVCCEKRQRAFEV*KGERLG
Trigger: CCCAAGACGTTCGCCTTTCCATACTTCGAAGGCTCG...CTGCCTCTTCTCACAACAGACCCACCACCTTCTCAGGGGTGGCATCACCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CCA 90 bp CTGACTGATACCCCCTGCAGAAAGGTGGCCATCCAGGAAGTTAGGGGTCAGAGGGGGGGTTTAGTTTTGTaGGAAGGGTCTGCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LTDTPCRKVAIQEVRGQRGGLVL*EGSALG
Trigger: GCCGAGAGCAGACCCTTCCCACAAAACTAAACCCCC...CCTCTGACCCCTAACTTCCTGGATGGCCACCTTTCTGCAGGGGGTATCAGTCAG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CCA 90 bp AAGTTAGGGGTCAGAGGCTTGGTGTTTGACAGGACCTGGCTCACAGTAAGCACTCGGCGAGGCAGGCAGTaGCCCTTCCAGCAAATGTCG +
Preference number: 4 (lower is better)
Translates to: KLGVRGLVFDRTWLTVSTRRGRQ*PFQQMS
Trigger: CGACATTTGCTGGAAGGGCCACTGCCTGCCTCGCCG...AGTGCTTACTGTGAGCCAGGTCCTGTCAAACACCAAGCCTCTGACCCCTAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR TCA 90 bp AAATGTCTCTGGGACAACAGGAAGGGTGATGCCACCCCTGAGAAGGTGGTGGGTCCGGAAAATGCGGATTaGAGGGACTGGGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: KCLWDNRKGDATPEKVVGPENAD*RDWGSV
Trigger: AACACTGCCCCAGTCCCTTCAATCCGCATTTTCCGG...ACCCACCACCTTCTCAGGGGTGGCATCACCCTTCCTGTTGTCCCAGAGACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR TCA 90 bp CTGACTGATACCCCCTGCAGAAAGGTGGCCATCCAGGAAGTTAGGGGTCAGAGGTCCGGTCTGGCTTGCTaGTGTACTTCTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LTDTPCRKVAIQEVRGQRSGLAC*CTSASG
Trigger: TCCAGAAGCAGAAGTACATCAGCAAGCCAGACCGGA...CCTCTGACCCCTAACTTCCTGGATGGCCACCTTTCTGCAGGGGGTATCAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR GCA 90 bp GGATCCAGGATCCTGAACAGAGGTGGCCACGTGGGCGTTCCCTCTCCAGTTTCCAACCAGATTTTCACCTaGGAGTCCTTCAAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GSRILNRGGHVGVPSPVSNQIFT*ESFKPS
Trigger: GCTTGGCTTGAAGGACTCGCAGGTGAAAATCTGGTT...GGAAACTGGAGAGGGAACGCCCACGTGGCCACCTCTGTTCAGGATCCTGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CCA 90 bp GAGAGTCAGACAAGTCCACACCCCAGTGCCAGGAGCTGGCACTCTGAAAAGGCTGCGCCGAGGAAAGGATaGCATTCACCCCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: ESQTSPHPSARSWHSEKAAPRKG*HSPQTS
Trigger: TGAAGTTTGGGGTGAATGCCATCCTTTCCTCGGCGC...AGCCTTTTCAGAGTGCCAGCTCCTGGCACTGGGGTGTGGACTTGTCTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CCA 90 bp AAATGTCTCTGGGACAACAGGAAGGGTGATGCCACCCCTGAGAAGGTGGTGGGTGGAGCTCGCGCTCTTTaGAGTTCCGCCATTTCATGC +
Preference number: 4 (lower is better)
Translates to: KCLWDNRKGDATPEKVVGGARAL*SSAISC
Trigger: GCATGAAATGGCGGAACTCCAAAGAGCGCGAGCTCC...ACCCACCACCTTCTCAGGGGTGGCATCACCCTTCCTGTTGTCCCAGAGACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CCA 90 bp CTCACAGTAAGCACTGGCAGTGGAACTAGGGACACCCCTCTACACACACCCTGCGACGCTGGAGGAAGCTaGGAAATAGGAGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: LTVSTGSGTRDTPLHTPCDAGGS*EIGGSD
Trigger: ATCAGATCCTCCTATTTCCCAGCTTCCTCCAGCGTC...GCAGGGTGTGTGTAGAGGGGTGTCCCTAGTTCCACTGCCAGTGCTTACTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CCA 90 bp GAACAGAGGTGGCCACGTGGGCGTTCCCTCTCCAGTTTCCAATTGCAACAGCCCCAGCTTTTTCCGGTCTaGCTTGCTGATGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: EQRWPRGRSLSSFQLQQPQLFPV*LADVLL
Trigger: CAGAAGTACATCAGCAAGCCAGACCGGAAAAAGCTG...GGGCTGTTGCAATTGGAAACTGGAGAGGGAACGCCCACGTGGCCACCTCTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
3UTR CAA 72 bp GAAAGGTGGCCATCCAGGAAGTTAGGGGTCAGAGGCTaGGTGTTTGACAGGACCTGGCTCACAGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: ERWPSRKLGVRG*VFDRTWLTVST
Trigger: AGTGCTTACTGTGAGCCAGGTCCTGTCAAACACCAAGCCTCTGACCCCTAACTTCCTGGATGGCCACCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CCA 90 bp AGTGCTTTCCCCTTAGACAGGGAGACGGTGCCCTTATTCTCTTTCAGAATCTCCGAAAGGCGAACGTCTTaGGAGGAGGGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SAFPLDRETVPLFSFRISERRTS*EEGSAA
Trigger: TGCTGCAGAGCCCTCCTCCCAAGACGTTCGCCTTTC...GGAGATTCTGAAAGAGAATAAGGGCACCGTCTCCCTGTCTAAGGGGAAAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR GCA 90 bp ATCTCCTGTGCTTTCTACTCTCAAGGTGAAAAGACAGGATGGCTGACTGATACCTTTGTGGGAAGGGTCTaGTCTCGGCAGCCCCCGCTA +
Preference number: 4 (lower is better)
Translates to: ISCAFYSQGEKTGWLTDTFVGRV*SRQPPL
Trigger: TAGCGGGGGCTGCCGAGAGCAGACCCTTCCCACAAA...GGTATCAGTCAGCCATCCTGTCTTTTCACCTTGAGAGTAGAAAGCACAGGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR GCA 90 bp CCGCCAAAGGAGCATCAAGAAATGAAAAGCTTGCTTGATAGTGCTTTCCCCTTAAGAGTGGCCGGAAAATaGGGATTGAAGGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: PPKEHQEMKSLLDSAFPLRVAGK*GLKGLG
Trigger: CCCCAGTCCCTTCAATCCGCATTTTCCGGCCACTCT...TAAGGGGAAAGCACTATCAAGCAAGCTTTTCATTTCTTGATGCTCCTTTGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CCA 90 bp CCGCCAAAGGAGCATCAAGAAATGAAAAGCTTGCTTGATAGTGCTTTCCCCTTATCCCCAGGTCCCTTCTaGCCTACATCACTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PPKEHQEMKSLLDSAFPLSPGPF*PTSLRS
Trigger: AGACCTTAGTGATGTAGGCCAGAAGGGACCTGGGGA...TAAGGGGAAAGCACTATCAAGCAAGCTTTTCATTTCTTGATGCTCCTTTGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS TCA 90 bp TGGAGAACTGCCTCGCCGGCTCCCGGACCCAGGAGAGCCCAGGTCTaGGGTCCCCGAGTCGGCGAGGGCTGCAGGGGCCTCTTGACTGGG +
Preference number: 5 (lower is better)
Translates to: WRTASPAPGPRRAQV*GPRVGEGCRGLLTG
Trigger: CCCAGTCAAGAGGCCCCTGCAGCCCTCGCCGACTCGGGGACCTCAGACCTGGGCTCTCCTGGGTCCGGGAGCCGGCGAGGCAGTTCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS GCA 90 bp GAAACGTGGGCTCGCTGGCAGGGGAGAGGGCGGTCTGTGGAGAACTaGCTCGCCGGCTCCCGGACCCAGGAGAGCCCAGGTCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: ETWARWQGRGRSVEN*LAGSRTQESPGLRS
Trigger: GGACCTCAGACCTGGGCTCTCCTGGGTCCGGGAGCCGGCGAGGCAGTTCTCCACAGACCGCCCTCTCCCCTGCCAGCGAGCCCACGTTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS GCA 90 bp CCAGGGCTTTCCGCTGCACGTCAGAGAACACGGCTCTGCGCAGCATaGCCCGGCGAGGCTTGCCGCGAGCAGCCAGCGGCCAGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: PGLSAARQRTRLCAA*PGEACREQPAARRR
Trigger: CCTTCTCCTGGCCGCTGGCTGCTCGCGGCAAGCCTCGCCGGGGCATGCTGCGCAGAGCCGTGTTCTCTGACGTGCAGCGGAAAGCCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS GCA 90 bp ACGTCTTCTCCAGGGCTTTCCGCTGCACGTCAGAGAACACGGCTCTaGGCAGCATGCCCCGGCGAGGCTTGCCGCGAGCAGCCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: TSSPGLSAARQRTRL*AACPGEACREQPAA
Trigger: GGCCGCTGGCTGCTCGCGGCAAGCCTCGCCGGGGCATGCTGCGCAGAGCCGTGTTCTCTGACGTGCAGCGGAAAGCCCTGGAGAAGACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CCA 90 bp AAACTTCAGAAACGTGGGCTCGCTGGCAGGGGAGAGGGCGGTCTGTaGAGAACTGCCTCGCCGGCTCCCGGACCCAGGAGAGCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: KLQKRGLAGRGEGGL*RTASPAPGPRRAQV
Trigger: GACCTGGGCTCTCCTGGGTCCGGGAGCCGGCGAGGCAGTTCTCCACAGACCGCCCTCTCCCCTGCCAGCGAGCCCACGTTTCTGAAGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CAA 90 bp GGAAGGGTGATGCCACCCCTGAGAAGGTGGTGGGTCTGTTGTGAGAAGAGGCAGAGGCGGGCACCCGGATaGTCTTCCTCCTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: GRVMPPLRRWWVCCEKRQRRAPG*SSSSSP
Trigger: TGGGGATGAGGAGGAAGACAATCCGGGTGCCCGCCT...CTGCCTCTTCTCACAACAGACCCACCACCTTCTCAGGGGTGGCATCACCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CAA 90 bp GAGAGTCAGACAAGTCCACACCCCAGTGCCAGGAGCTGGCACTCTGAAAAGGCTGGAAAGGCGAACGTCTaGGGAGGAGGGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ESQTSPHPSARSWHSEKAGKANV*GGGLCS
Trigger: GCTGCAGAGCCCTCCTCCCAAGACGTTCGCCTTTCC...AGCCTTTTCAGAGTGCCAGCTCCTGGCACTGGGGTGTGGACTTGTCTGACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS GCA 90 bp GAGCCTTCGAAGTATGGAAAGGCGAACGTCTTGGGAGGAGGGCTCTaGAGCAAAGCGGGCGAAGTTTCTCTTCTAGGCGCCGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: EPSKYGKANVLGGGL*SKAGEVSLLGAEER
Trigger: CCTTTCCTCGGCGCCTAGAAGAGAAACTTCGCCCGCTTTGCTGCAGAGCCCTCCTCCCAAGACGTTCGCCTTTCCATACTTCGAAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CCA 90 bp CGGCCAGGAGAAGGTCCCAGGGATAGGCACGACGCTGGAGGAAGCTaGGAAATAGGAGGATCTGATAAAGGGTTGGAACGAGCCTTCGAA +
Preference number: 5 (lower is better)
Translates to: RPGEGPRDRHDAGGS*EIGGSDKGLERAFE
Trigger: TTCGAAGGCTCGTTCCAACCCTTTATCAGATCCTCCTATTTCCCAGCTTCCTCCAGCGTCGTGCCTATCCCTGGGACCTTCTCCTGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CAA 90 bp GATACCCCCTGCAGAAAGGTGGCCATCCAGGAAGTTAGGGGTCAGAGGCTTGGTAGGAGCTCGCGCTCTTaGGAGTTCCGCCATTTCATG +
Preference number: 5 (lower is better)
Translates to: DTPCRKVAIQEVRGQRLGRSSRS*EFRHFM
Trigger: CATGAAATGGCGGAACTCCAAAGAGCGCGAGCTCCT...ACCAAGCCTCTGACCCCTAACTTCCTGGATGGCCACCTTTCTGCAGGGGGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CAA 90 bp TCTGGGACAACAGGAAGGGTGATGCCACCCCTGAGAAGGTGGTGGGTCTGTTGTGATGGGGGTTTAGTTTaGTGGGAAGGGTCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: SGTTGRVMPPLRRWWVCCDGGLV*WEGSAL
Trigger: GAGAGCAGACCCTTCCCACAAAACTAAACCCCCATC...ACAACAGACCCACCACCTTCTCAGGGGTGGCATCACCCTTCCTGTTGTCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CAA 90 bp GGAAGGGTGATGCCACCCCTGAGAAGGTGGTGGGTCTGTTGTGAGAAGAGGCAGTTTTTCCGGTCTGGCTaGCTGATGTACTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GRVMPPLRRWWVCCEKRQFFRSG*LMYFCF
Trigger: GAAGCAGAAGTACATCAGCAAGCCAGACCGGAAAAA...CTGCCTCTTCTCACAACAGACCCACCACCTTCTCAGGGGTGGCATCACCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CCA 90 bp GAAATAGGAGGATCTGATAAAGGGTTGGAACGAGCCTTCGAAGTATaGAAAGGCGAACGTCTTGGGAGGAGGGCTCTGCAGCAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: EIGGSDKGLERAFEV*KGERLGRRALQQSG
Trigger: CCCGCTTTGCTGCAGAGCCCTCCTCCCAAGACGTTCGCCTTTCCATACTTCGAAGGCTCGTTCCAACCCTTTATCAGATCCTCCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS-3UTR CAA 90 bp AAGTTAGGGGTCAGAGGCTTGGTGTTTGACAGGACCTGGCTCACAGTAAGCACTTCCTTCAAGCCAAGCTaGGAGGCCAGCTTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: KLGVRGLVFDRTWLTVSTSFKPS*EASFFR
Trigger: CCGGAAAAAGCTGGCCTCCAAGCTTGGCTTGAAGGA...AGTGCTTACTGTGAGCCAGGTCCTGTCAAACACCAAGCCTCTGACCCCTAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS TCA 72 bp GCCTCGCCGGCTCCCGGACCCAGGAGAGCCCAGGTCTaGGGTCCCCGAGTCGGCGAGGGCTGCAGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: ASPAPGPRRAQV*GPRVGEGCRGL
Trigger: GAGGCCCCTGCAGCCCTCGCCGACTCGGGGACCTCAGACCTGGGCTCTCCTGGGTCCGGGAGCCGGCGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CCA 72 bp ACCCGGGCTGCTCGAGTGCGCCGGCGAGGCAGGCAGTaGCCCTTCCAGCAAATGTCGCGGGTCTGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: TRAARVRRRGRQ*PFQQMSRVCGR
Trigger: GCGCCCGCAGACCCGCGACATTTGCTGGAAGGGCCACTGCCTGCCTCGCCGGCGCACTCGAGCAGCCCGGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS GCA 72 bp TCCGCTGCACGTCAGAGAACACGGCTCTGCGCAGCATaGCCCGGCGAGGCTTGCCGCGAGCAGCCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: SAARQRTRLCAA*PGEACREQPAA
Trigger: GGCCGCTGGCTGCTCGCGGCAAGCCTCGCCGGGGCATGCTGCGCAGAGCCGTGTTCTCTGACGTGCAGCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS GCA 72 bp AGAACACGGCTCTGCGCAGCATGCCCCGGCGAGGCTTaGCGCGAGCAGCCAGCGGCCAGGAGAAGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RTRLCAACPGEA*REQPAARRRSQ
Trigger: CTGGGACCTTCTCCTGGCCGCTGGCTGCTCGCGGCAAGCCTCGCCGGGGCATGCTGCGCAGAGCCGTGTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CAA 72 bp GAGAACACGGCTCTGCGCAGCATGCCCCGGCGAGGCTaGCCGCGAGCAGCCAGCGGCCAGGAGAAGGTCCCA +
Preference number: 6 (lower is better)
Translates to: ENTALRSMPRRG*PRAASGQEKVP
Trigger: TGGGACCTTCTCCTGGCCGCTGGCTGCTCGCGGCAAGCCTCGCCGGGGCATGCTGCGCAGAGCCGTGTTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS GCA 72 bp CCAGGGCTTTCCGCTGCACGTCAGAGAACACGGCTCTaGGCAGCATGCCCCGGCGAGGCTTGCCGCGAGCAG +
Preference number: 6 (lower is better)
Translates to: PGLSAARQRTRL*AACPGEACREQ
Trigger: CTGCTCGCGGCAAGCCTCGCCGGGGCATGCTGCGCAGAGCCGTGTTCTCTGACGTGCAGCGGAAAGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CCA 72 bp AAACGTGGGCTCGCTGGCAGGGGAGAGGGCGGTCTGTaGAGAACTGCCTCGCCGGCTCCCGGACCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: KRGLAGRGEGGL*RTASPAPGPRR
Trigger: TCTCCTGGGTCCGGGAGCCGGCGAGGCAGTTCTCCACAGACCGCCCTCTCCCCTGCCAGCGAGCCCACGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS TCA 72 bp CTCGCCCTCCTCATCCTCATCAGAATCAGAGAAGTCTaGCGGTTTACCCGGGCTGCTCGAGTGCGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: LALLILIRIREV*RFTRAARVRRR
Trigger: TCGCCGGCGCACTCGAGCAGCCCGGGTAAACCGTCAGACTTCTCTGATTCTGATGAGGATGAGGAGGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CAA 72 bp TCTCGGCAGCCCCCGCTAGACAGGAGCTCGCGCTCTTaGGAGTTCCGCCATTTCATGCGTCGATTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SRQPPLDRSSRS*EFRHFMRRFWN
Trigger: GTTCCAGAATCGACGCATGAAATGGCGGAACTCCAAAGAGCGCGAGCTCCTGTCTAGCGGGGGCTGCCGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS GCA 72 bp AAGTATGGAAAGGCGAACGTCTTGGGAGGAGGGCTCTaGAGCAAAGCGGGCGAAGTTTCTCTTCTAGGCGCC +
Preference number: 6 (lower is better)
Translates to: KYGKANVLGGGL*SKAGEVSLLGA
Trigger: GGCGCCTAGAAGAGAAACTTCGCCCGCTTTGCTGCAGAGCCCTCCTCCCAAGACGTTCGCCTTTCCATACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CCA 72 bp GGAACGAGCCTTCGAAGTATGGAAAGGCGAACGTCTTaGGAGGAGGGCTCTGCAGCAAAGCGGGCGAAGTTT +
Preference number: 6 (lower is better)
Translates to: GTSLRSMERRTS*EEGSAAKRAKF
Trigger: AAACTTCGCCCGCTTTGCTGCAGAGCCCTCCTCCCAAGACGTTCGCCTTTCCATACTTCGAAGGCTCGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CAA 72 bp TGGAACGAGCCTTCGAAGTATGGAAAGGCGAACGTCTaGGGAGGAGGGCTCTGCAGCAAAGCGGGCGAAGTT +
Preference number: 6 (lower is better)
Translates to: WNEPSKYGKANV*GGGLCSKAGEV
Trigger: AACTTCGCCCGCTTTGCTGCAGAGCCCTCCTCCCAAGACGTTCGCCTTTCCATACTTCGAAGGCTCGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CCA 72 bp CCCGGATTGTCTTCCTCCTCATCCCCAGGTCCCTTCTaGCCTACATCACTAAGGTCTGGATGGGGGTTTAGT +
Preference number: 6 (lower is better)
Translates to: PGLSSSSSPGPF*PTSLRSGWGFS
Trigger: ACTAAACCCCCATCCAGACCTTAGTGATGTAGGCCAGAAGGGACCTGGGGATGAGGAGGAAGACAATCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CCA 72 bp GGATCTGATAAAGGGTTGGAACGAGCCTTCGAAGTATaGAAAGGCGAACGTCTTGGGAGGAGGGCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: GSDKGLERAFEV*KGERLGRRALQ
Trigger: CTGCAGAGCCCTCCTCCCAAGACGTTCGCCTTTCCATACTTCGAAGGCTCGTTCCAACCCTTTATCAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CCA 72 bp GAAGGTCCCAGGGATAGGCACGACGCTGGAGGAAGCTaGGAAATAGGAGGATCTGATAAAGGGTTGGAACGA +
Preference number: 6 (lower is better)
Translates to: EGPRDRHDAGGS*EIGGSDKGLER
Trigger: TCGTTCCAACCCTTTATCAGATCCTCCTATTTCCCAGCTTCCTCCAGCGTCGTGCCTATCCCTGGGACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CAA 90 bp CACGACGCTGGAGGAAGCTGGGAAATAGGAGGATCTGATAAAGGGTaGGAACGAGCCTTCGAAGTATGGAAAGGCGAACGTCTTGGGAGG +
Preference number: 6 (lower is better)
Translates to: HDAGGSWEIGGSDKG*ERAFEVWKGERLGR
Trigger: CCTCCCAAGACGTTCGCCTTTCCATACTTCGAAGGCTCGTTCCAACCCTTTATCAGATCCTCCTATTTCCCAGCTTCCTCCAGCGTCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CAA 72 bp AACCAGATTTTCACCTGCGAGTCCTTCAAGCCAAGCTaGGAGGCCAGCTTTTTCCGGTCTGGCTTGCTGATG +
Preference number: 6 (lower is better)
Translates to: NQIFTCESFKPS*EASFFRSGLLM
Trigger: CATCAGCAAGCCAGACCGGAAAAAGCTGGCCTCCAAGCTTGGCTTGAAGGACTCGCAGGTGAAAATCTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CAA 90 bp ATAAAGGGTTGGAACGAGCCTTCGAAGTATGGAAAGGCGAACGTCTaGGGAGGAGGGCTCTGCAGCAAAGCGGGCGAAGTTTCTCTTCTA +
Preference number: 6 (lower is better)
Translates to: IKGWNEPSKYGKANV*GGGLCSKAGEVSLL
Trigger: TAGAAGAGAAACTTCGCCCGCTTTGCTGCAGAGCCCTCCTCCCAAGACGTTCGCCTTTCCATACTTCGAAGGCTCGTTCCAACCCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7
CDS CAA 72 bp GGAGGAAGCTGGGAAATAGGAGGATCTGATAAAGGGTaGGAACGAGCCTTCGAAGTATGGAAAGGCGAACGT +
Preference number: 6 (lower is better)
Translates to: GGSWEIGGSDKG*ERAFEVWKGER
Trigger: ACGTTCGCCTTTCCATACTTCGAAGGCTCGTTCCAACCCTTTATCAGATCCTCCTATTTCCCAGCTTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032717.7