Pregenerated sensors for DBR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032469Ensembl transcript IDs: ENSMUST00000066650.12, ENSMUST00000136884.2, ENSMUST00000138002.2, ENSMUST00000139796.8, ENSMUST00000148987.8
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ATGATTTCATCTGGATTAATGGAGGAGAGGGCCGACGTGTCTGTGTaGTACTCACTCCGGTCCTCTTCAGACTCCTCAGTCCCCGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: MISSGLMEERADVSV*YSLRSSSDSSVPGS Trigger: TGACCCGGGGACTGAGGAGTCTGAAGAGGACCGGAGTGAGTACAACACAGACACGTCGGCCCTCTCCTCCATTAATCCAGATGAAATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| 3UTR CAA 90 bp | ACAGAACTCAGTCGTCTGTGGATTGATCCTGTGAACCAGCTTCACTaGTGTCTGGGGCTTACTGGGATCATAACAAGCAGCTGTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: TELSRLWIDPVNQLH*CLGLTGIITSSCHG Trigger: ACCATGACAGCTGCTTGTTATGATCCCAGTAAGCCCCAGACACAAGTGAAGCTGGTTCACAGGATCAATCCACAGACGACTGAGTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCTCCTCCTCTTCATCCAGCATGATTTCATCTGGATTAATGGAGGAGAGTCCTCTCTGGCCTTCTaGATCATGACATTGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: LLLLLFIQHDFIWINGGESSLAF*IMTLMS Trigger: AGACATCAATGTCATGATTCAGAAGGCCAGAGAGGA...CTCTCCTCCATTAATCCAGATGAAATCATGCTGGATGAAGAGGAGGAGGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCAGAAGCAGGTTCCACAGAAGGTGTGTTCATGTCACTGTGAGCGCTTACAGCATAGTTTCTTCCGTTaGACTATAATCCCACCTTGT | + |
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Preference number: 2 (lower is better) Translates to: GQKQVPQKVCSCHCERLQHSFFR*TIIPPC Trigger: ACAAGGTGGGATTATAGTGCAACGGAAGAAACTATG...CTGTAAGCGCTCACAGTGACATGAACACACCTTCTGTGGAACCTGCTTCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| 3UTR-3UTR CCA 90 bp | ATCATGACATTGATGTCTGTGATGCCAAGCTGGGCACAGAACTCAGTCGTCTGTGGGACTTTAGGGTCATaGTTCAATTTTTCCATTACT | + |
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Preference number: 2 (lower is better) Translates to: IMTLMSVMPSWAQNSVVCGTLGS*FNFSIT Trigger: AGTAATGGAAAAATTGAACCATGACCCTAAAGTCCC...ACAGACGACTGAGTTCTGTGCCCAGCTTGGCATCACAGACATCAATGTCATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| 3UTR TCA 72 bp | GAAGCAGGTTCCACAGAAGGTGTGTTCATGTCACTGTaGGCGCTTACAGCCTCCTCCTCCTCCTCCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: EAGSTEGVFMSL*ALTASSSSSSS Trigger: GGAGGAGGAGGAGGAGGAGGAGGCTGTAAGCGCTCACAGTGACATGAACACACCTTCTGTGGAACCTGCTTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| 3UTR-3UTR CAA 90 bp | ATCATGACATTGATGTCTGTGATGCCAAGCTGGGCACAGAACTCAGTCGTCTGTGTGAACCAGCTTCACTaGTGTCTGGGGCTTACTGGG | + |
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Preference number: 3 (lower is better) Translates to: IMTLMSVMPSWAQNSVVCVNQLH*CLGLTG Trigger: CCCAGTAAGCCCCAGACACAAGTGAAGCTGGTTCAC...ACAGACGACTGAGTTCTGTGCCCAGCTTGGCATCACAGACATCAATGTCATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| 3UTR CCA 72 bp | TGTGATGCCAAGCTGGGCACAGAACTCAGTCGTCTGTaGATTGATCCTGTGAACCAGCTTCACTTGTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: CDAKLGTELSRL*IDPVNQLHLCL Trigger: CAGACACAAGTGAAGCTGGTTCACAGGATCAATCCACAGACGACTGAGTTCTGTGCCCAGCTTGGCATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| 3UTR GCA 72 bp | CAATTTTTCCATTACTTCCTTCATAGTTTCTTCCGTTaGACTATAATCCCACCTTGTGTGCAGACCGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: QFFHYFLHSFFR*TIIPPCVQTVV Trigger: GACAACGGTCTGCACACAAGGTGGGATTATAGTGCAACGGAAGAAACTATGAAGGAAGTAATGGAAAAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| CDS-3UTR TCA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCGCAGAAGGCAAGCTCTaGGGGAGCAGACGCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: PKLGPIRDQRNDYSSQVIAEGKL*GSRRTL Trigger: CAAGGTGCGTCTGCTCCCTCAGAGCTTGCCTTCTGC...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR CCA 90 bp | CCACCTTGTGTGCAGACCGTTGTCTTCAGGCATATTCCACAGGCCCCCAGTCACAAGGAAGTCTCTGTGTaGCAAGCACTTGTCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PPCVQTVVFRHIPQAPSHKEVSV*QALVQG Trigger: GCCTTGGACAAGTGCTTGCCACACAGAGACTTCCTT...GTGACTGGGGGCCTGTGGAATATGCCTGAAGACAACGGTCTGCACACAAGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| 3UTR CAA 72 bp | TCTGGATTAATGGAGGAGAGGGCCGACGTGTCTGTGTaGTACTCACTCCGGTCCTCTTCAGACTCCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLMEERADVSV*YSLRSSSDSSV Trigger: GACTGAGGAGTCTGAAGAGGACCGGAGTGAGTACAACACAGACACGTCGGCCCTCTCCTCCATTAATCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| CDS-3UTR GCA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCAGACCACACTGCACATaGAGGGCAGAAGGCAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PKLGPIRDQRNDYSSQVIRPHCT*RAEGKL Trigger: GAGCTTGCCTTCTGCCCTGCATGTGCAGTGTGGTCT...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR GCA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCGATGAGAGACCACACTaGACATGCAGGGCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PKLGPIRDQRNDYSSQVIDERPH*TCRAEG Trigger: GCCTTCTGCCCTGCATGTGCAGTGTGGTCTCTCATC...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR GCA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCATGCTGCATCAGGGCTaGGAACTTGACATGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: PKLGPIRDQRNDYSSQVIMLHQG*ELDMQV Trigger: CACCTGCATGTCAAGTTCGCAGCCCTGATGCAGCAT...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR GCA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCCTTCTCCCTCCGTTCTaGAGACAAGCAAACTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PKLGPIRDQRNDYSSQVILLPPF*RQANSS Trigger: TGAGGAGTTTGCTTGTCTGCAGAACGGAGGGAGAAG...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR GCA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCAAACCATTGCCACCTTaGTTCTCCCTCCGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKLGPIRDQRNDYSSQVIKPLPP*FSLRSA Trigger: TGCAGAACGGAGGGAGAAGCAAGGTGGCAATGGTTT...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR GCA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCAGAACCCAAAACCATTaGCACCTTGCTTCTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKLGPIRDQRNDYSSQVIRTQNH*HLASPS Trigger: GGAGGGAGAAGCAAGGTGGCAATGGTTTTGGGTTCT...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR CCA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCAAGGAAGTCTCTGTGTaGCAAGCACTTGTCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PKLGPIRDQRNDYSSQVIKEVSV*QALVQG Trigger: GCCTTGGACAAGTGCTTGCCACACAGAGACTTCCTT...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| 3UTR CAA 72 bp | AGTCGTCTGTGGATTGATCCTGTGAACCAGCTTCACTaGTGTCTGGGGCTTACTGGGATCATAACAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLWIDPVNQLH*CLGLTGIITSS Trigger: GCTGCTTGTTATGATCCCAGTAAGCCCCAGACACAAGTGAAGCTGGTTCACAGGATCAATCCACAGACGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| CDS-3UTR GCA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCCTTGGTTTCTTTGCCTaGTTGGTCTTTATCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKLGPIRDQRNDYSSQVILGFFA*LVFICG Trigger: GCCACAGATAAAGACCAAGCAGGCAAAGAAACCAAG...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR GCA 90 bp | TCCTCCTCTTCATCCAGCATGATTTCATCTGGATTAATGGAGGAGAGGGCCGACCTTGGTTTCTTTGCCTaGTTGGTCTTTATCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSSMISSGLMEERADLGFFA*LVFICG Trigger: GCCACAGATAAAGACCAAGCAGGCAAAGAAACCAAG...GTCGGCCCTCTCCTCCATTAATCCAGATGAAATCATGCTGGATGAAGAGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| CDS-3UTR GCA 90 bp | GTCATGGTGAAGTTACAGGGGACTTTAGGGTCATGGTTCAATTTTTCCATTACTATGCTGCATCAGGGCTaGGAACTTGACATGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VMVKLQGTLGSWFNFSITMLHQG*ELDMQV Trigger: CACCTGCATGTCAAGTTCGCAGCCCTGATGCAGCAT...AGTAATGGAAAAATTGAACCATGACCCTAAAGTCCCCTGTAACTTCACCATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| CDS CCA 90 bp | GGCGGCACGGCCATGCAGCGCAGGTCGGCCTCGTTGCGCACCGCCTaGAAGTCGCCGCAGCACAGAAGGAGATCCACGGGTCCCGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: GGTAMQRRSASLRTA*KSPQHRRRSTGPEP Trigger: CGGCTCGGGACCCGTGGATCTCCTTCTGTGCTGCGGCGACTTCCAGGCGGTGCGCAACGAGGCCGACCTGCGCTGCATGGCCGTGCCGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066650.12 ENSMUST00000148987.8 |
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| CDS GCA 90 bp | GACGGTACTTGGGCGGCACGGCCATGCAGCGCAGGTCGGCCTCGTTaGGCACCGCCTGGAAGTCGCCGCAGCACAGAAGGAGATCCACGG | + |
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Preference number: 5 (lower is better) Translates to: DGTWAARPCSAGRPR*APPGSRRSTEGDPR Trigger: CCGTGGATCTCCTTCTGTGCTGCGGCGACTTCCAGGCGGTGCGCAACGAGGCCGACCTGCGCTGCATGGCCGTGCCGCCCAAGTACCGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066650.12 ENSMUST00000148987.8 |
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| CDS GCA 90 bp | ATCTGTAGAAGGTCTGCATGTGACGGTACTTGGGCGGCACGGCCATaGAGCGCAGGTCGGCCTCGTTGCGCACCGCCTGGAAGTCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: ICRRSACDGTWAARP*SAGRPRCAPPGSRR Trigger: GCGGCGACTTCCAGGCGGTGCGCAACGAGGCCGACCTGCGCTGCATGGCCGTGCCGCCCAAGTACCGTCACATGCAGACCTTCTACAGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066650.12 ENSMUST00000148987.8 |
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| CDS GCA 90 bp | ATGCAGGGCAGAAGGCAAGCTCTGAGGGAGCAGACGCACCTTGTGTaGAGACCGTTGTCTTCAGGCATATTCCACAGGCCCCCAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: MQGRRQALREQTHLV*RPLSSGIFHRPPVT Trigger: TGTGACTGGGGGCCTGTGGAATATGCCTGAAGACAACGGTCTGCACACAAGGTGCGTCTGCTCCCTCAGAGCTTGCCTTCTGCCCTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS TCA 90 bp | CTTGGTCTTTATCTGTGGCCTGATGCTGCATCAGGGCTGCGAACTTaGCATGCAGGTGCGCGGAGAACCAGTACGCAGGCTGTAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LGLYLWPDAASGLRT*HAGARRTSTQAVGA Trigger: AGCACCTACAGCCTGCGTACTGGTTCTCCGCGCACCTGCATGTCAAGTTCGCAGCCCTGATGCAGCATCAGGCCACAGATAAAGACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066650.12 ENSMUST00000138002.2 ENSMUST00000139796.8 |
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| CDS TCA 90 bp | ACAGATGAGAGACCACACTGCACATGCAGGGCAGAAGGCAAGCTCTaGGGGAGCAGACGCACCTTGTGTGCAGACCGTTGTCTTCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: TDERPHCTCRAEGKL*GSRRTLCADRCLQA Trigger: TGCCTGAAGACAACGGTCTGCACACAAGGTGCGTCTGCTCCCTCAGAGCTTGCCTTCTGCCCTGCATGTGCAGTGTGGTCTCTCATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS GCA 90 bp | TTTGCCTGCTTGGTCTTTATCTGTGGCCTGATGCTGCATCAGGGCTaGGAACTTGACATGCAGGTGCGCGGAGAACCAGTACGCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FACLVFICGLMLHQG*ELDMQVRGEPVRRL Trigger: CAGCCTGCGTACTGGTTCTCCGCGCACCTGCATGTCAAGTTCGCAGCCCTGATGCAGCATCAGGCCACAGATAAAGACCAAGCAGGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066650.12 ENSMUST00000136884.2 ENSMUST00000138002.2 ENSMUST00000139796.8 |
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| CDS GCA 90 bp | TTCATCCCCAGACTCCACCGTTTCACCACATTTCCCCTCTCCACTTaGTGGAGAACGGGATGCATCGTCAGAGGACACAAACATGGAACT | + |
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Preference number: 5 (lower is better) Translates to: FIPRLHRFTTFPLST*WRTGCIVRGHKHGT Trigger: AGTTCCATGTTTGTGTCCTCTGACGATGCATCCCGTTCTCCAGCAAGTGGAGAGGGGAAATGTGGTGAAACGGTGGAGTCTGGGGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066650.12 |
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| CDS-3UTR CAA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCCAGAACCCAAAACCATaGCCACCTTGCTTCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: PKLGPIRDQRNDYSSQVIQNPKP*PPCFSL Trigger: GAGGGAGAAGCAAGGTGGCAATGGTTTTGGGTTCTG...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR CAA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCCTTGTGTGCAGACCGTaGTCTTCAGGCATATTCCAC | + |
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Preference number: 5 (lower is better) Translates to: PKLGPIRDQRNDYSSQVILVCRP*SSGIFH Trigger: GTGGAATATGCCTGAAGACAACGGTCTGCACACAAG...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS GCA 90 bp | CTCTGTGTGGCAAGCACTTGTCCAAGGCTAAAAACTTGGTTTCTTTaGCTGCTTGGTCTTTATCTGTGGCCTGATGCTGCATCAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LCVASTCPRLKTWFL*LLGLYLWPDAASGL Trigger: CAGCCCTGATGCAGCATCAGGCCACAGATAAAGACCAAGCAGGCAAAGAAACCAAGTTTTTAGCCTTGGACAAGTGCTTGCCACACAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066650.12 ENSMUST00000136884.2 ENSMUST00000139796.8 |
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| CDS-3UTR CAA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCCTGTGTGGCAAGCACTaGTCCAAGGCTAAAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: PKLGPIRDQRNDYSSQVILCGKH*SKAKNL Trigger: CAAGTTTTTAGCCTTGGACAAGTGCTTGCCACACAG...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR CAA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCTCCAAGGCTAAAAACTaGGTTTCTTTGCCTGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: PKLGPIRDQRNDYSSQVISKAKN*VSLPAW Trigger: CCAAGCAGGCAAAGAAACCAAGTTTTTAGCCTTGGA...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR CAA 90 bp | CCTAAGTTAGGCCCAATCAGAGACCAGAGGAACGACTACAGCTCACAGGTCATCAAAAACTTGGTTTCTTaGCCTGCTTGGTCTTTATCT | + |
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Preference number: 5 (lower is better) Translates to: PKLGPIRDQRNDYSSQVIKNLVS*PAWSLS Trigger: AGATAAAGACCAAGCAGGCAAAGAAACCAAGTTTTT...GATGACCTGTGAGCTGTAGTCGTTCCTCTGGTCTCTGATTGGGCCTAACTTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS-3UTR CAA 90 bp | GCAGCTGTCATGGTGAAGTTACAGGGGACTTTAGGGTCATGGTTCAATTTTTCCTCCAAGGCTAAAAACTaGGTTTCTTTGCCTGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: AAVMVKLQGTLGSWFNFSSKAKN*VSLPAW Trigger: CCAAGCAGGCAAAGAAACCAAGTTTTTAGCCTTGGA...GGAAAAATTGAACCATGACCCTAAAGTCCCCTGTAACTTCACCATGACAGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| CDS GCA 90 bp | CTCTGTGTGGCAAGCACTTGTCCAAGGCTAAAAACTTGGTTTCTTTaGCTGCTTGGTCTTTATCTGTGGCCTGTTTTAATTTGTAGACCT | + |
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Preference number: 5 (lower is better) Translates to: LCVASTCPRLKTWFL*LLGLYLWPVLICRP Trigger: AGGTCTACAAATTAAAACAGGCCACAGATAAAGACCAAGCAGGCAAAGAAACCAAGTTTTTAGCCTTGGACAAGTGCTTGCCACACAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148987.8 |
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| CDS-3UTR CAA 90 bp | ATGTCAGAAAAGCTTGTAGAGAGGTCAGAAGCCTGGTCAGAAGCAGGTTCCACAAAAAACTTGGTTTCTTaGCCTGCTTGGTCTTTATCT | + |
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Preference number: 5 (lower is better) Translates to: MSEKLVERSEAWSEAGSTKNLVS*PAWSLS Trigger: AGATAAAGACCAAGCAGGCAAAGAAACCAAGTTTTT...TGTGGAACCTGCTTCTGACCAGGCTTCTGACCTCTCTACAAGCTTTTCTGACAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000139796.8 |
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| CDS GCA 72 bp | TGGGCGGCACGGCCATGCAGCGCAGGTCGGCCTCGTTaGGCACCGCCTGGAAGTCGCCGCAGCACAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: WAARPCSAGRPR*APPGSRRSTEG Trigger: TCCTTCTGTGCTGCGGCGACTTCCAGGCGGTGCGCAACGAGGCCGACCTGCGCTGCATGGCCGTGCCGCCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066650.12 ENSMUST00000148987.8 |
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| CDS CAA 72 bp | TTGGGCGGCACGGCCATGCAGCGCAGGTCGGCCTCGTaGCGCACCGCCTGGAAGTCGCCGCAGCACAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LGGTAMQRRSAS*RTAWKSPQHRR Trigger: CCTTCTGTGCTGCGGCGACTTCCAGGCGGTGCGCAACGAGGCCGACCTGCGCTGCATGGCCGTGCCGCCCAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066650.12 ENSMUST00000148987.8 |
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| CDS GCA 72 bp | AGGTCTGCATGTGACGGTACTTGGGCGGCACGGCCATaGAGCGCAGGTCGGCCTCGTTGCGCACCGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RSACDGTWAARP*SAGRPRCAPPG Trigger: TCCAGGCGGTGCGCAACGAGGCCGACCTGCGCTGCATGGCCGTGCCGCCCAAGTACCGTCACATGCAGACCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066650.12 ENSMUST00000148987.8 |
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| CDS CCA 72 bp | GCCATGCAGCGCAGGTCGGCCTCGTTGCGCACCGCCTaGAAGTCGCCGCAGCACAGAAGGAGATCCACGGGT | + |
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Preference number: 6 (lower is better) Translates to: AMQRRSASLRTA*KSPQHRRRSTG Trigger: ACCCGTGGATCTCCTTCTGTGCTGCGGCGACTTCCAGGCGGTGCGCAACGAGGCCGACCTGCGCTGCATGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066650.12 ENSMUST00000148987.8 |
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| CDS TCA 72 bp | TATCTGTGGCCTGATGCTGCATCAGGGCTGCGAACTTaGCATGCAGGTGCGCGGAGAACCAGTACGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: YLWPDAASGLRT*HAGARRTSTQA Trigger: AGCCTGCGTACTGGTTCTCCGCGCACCTGCATGTCAAGTTCGCAGCCCTGATGCAGCATCAGGCCACAGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066650.12 ENSMUST00000136884.2 ENSMUST00000138002.2 ENSMUST00000139796.8 |
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| CDS CCA 72 bp | AGTAATATCTGTAGAAGGTCTGCATGTGACGGTACTTaGGCGGCACGGCCATGCAGCGCAGGTCGGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: SNICRRSACDGT*AARPCSAGRPR Trigger: ACGAGGCCGACCTGCGCTGCATGGCCGTGCCGCCCAAGTACCGTCACATGCAGACCTTCTACAGATATTACT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066650.12 ENSMUST00000148987.8 |
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| CDS CAA 72 bp | GCTCTGAGGGAGCAGACGCACCTTGTGTGCAGACCGTaGTCTTCAGGCATATTCCACAGGCCCCCAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: ALREQTHLVCRP*SSGIFHRPPVT Trigger: TGTGACTGGGGGCCTGTGGAATATGCCTGAAGACAACGGTCTGCACACAAGGTGCGTCTGCTCCCTCAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS CAA 90 bp | AGAAGGCAAGCTCTGAGGGAGCAGACGCACCTTGTGTGCAGACCGTaGTCTTCAGGCATATTCCACAGGCCCCCAGTCACATTAATCAGG | + |
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Preference number: 6 (lower is better) Translates to: RRQALREQTHLVCRP*SSGIFHRPPVTLIR Trigger: CCTGATTAATGTGACTGGGGGCCTGTGGAATATGCCTGAAGACAACGGTCTGCACACAAGGTGCGTCTGCTCCCTCAGAGCTTGCCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS GCA 72 bp | TTGGTCTTTATCTGTGGCCTGATGCTGCATCAGGGCTaGGAACTTGACATGCAGGTGCGCGGAGAACCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LVFICGLMLHQG*ELDMQVRGEPV Trigger: TACTGGTTCTCCGCGCACCTGCATGTCAAGTTCGCAGCCCTGATGCAGCATCAGGCCACAGATAAAGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066650.12 ENSMUST00000136884.2 ENSMUST00000138002.2 ENSMUST00000139796.8 |
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| CDS CAA 72 bp | CAGACTCCACCGTTTCACCACATTTCCCCTCTCCACTaGCTGGAGAACGGGATGCATCGTCAGAGGACACAA | + |
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Preference number: 6 (lower is better) Translates to: QTPPFHHISPLH*LENGMHRQRTQ Trigger: TTGTGTCCTCTGACGATGCATCCCGTTCTCCAGCAAGTGGAGAGGGGAAATGTGGTGAAACGGTGGAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066650.12 |
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| CDS GCA 72 bp | AGACTCCACCGTTTCACCACATTTCCCCTCTCCACTTaGTGGAGAACGGGATGCATCGTCAGAGGACACAAA | + |
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Preference number: 6 (lower is better) Translates to: RLHRFTTFPLST*WRTGCIVRGHK Trigger: TTTGTGTCCTCTGACGATGCATCCCGTTCTCCAGCAAGTGGAGAGGGGAAATGTGGTGAAACGGTGGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066650.12 |
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| CDS CCA 72 bp | CTCCACCGTTTCACCACATTTCCCCTCTCCACTTGCTaGAGAACGGGATGCATCGTCAGAGGACACAAACAT | + |
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Preference number: 6 (lower is better) Translates to: LHRFTTFPLSTC*RTGCIVRGHKH Trigger: ATGTTTGTGTCCTCTGACGATGCATCCCGTTCTCCAGCAAGTGGAGAGGGGAAATGTGGTGAAACGGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066650.12 |
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| CDS CAA 90 bp | TTTCATCCCCAGACTCCACCGTTTCACCACATTTCCCCTCTCCACTaGCTGGAGAACGGGATGCATCGTCAGAGGACACAAACATGGAAC | + |
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Preference number: 6 (lower is better) Translates to: FHPQTPPFHHISPLH*LENGMHRQRTQTWN Trigger: GTTCCATGTTTGTGTCCTCTGACGATGCATCCCGTTCTCCAGCAAGTGGAGAGGGGAAATGTGGTGAAACGGTGGAGTCTGGGGATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066650.12 |
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| CDS TCA 72 bp | TTGGTTTCTTTGCCTGCTTGGTCTTTATCTGTGGCCTaGTGCTGCATCAGGGCTGCGAACTTGACATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LVSLPAWSLSVA*CCIRAANLTCR Trigger: CCTGCATGTCAAGTTCGCAGCCCTGATGCAGCATCAGGCCACAGATAAAGACCAAGCAGGCAAAGAAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066650.12 ENSMUST00000136884.2 ENSMUST00000138002.2 ENSMUST00000139796.8 |
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| CDS TCA 72 bp | TCAGGAGCACTGGGGTCATGTTCTATCTCTAACACCTaGAGGAAGTCTCTGTGTGGCAAGCACTTGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SGALGSCSISNT*RKSLCGKHLSK Trigger: CTTGGACAAGTGCTTGCCACACAGAGACTTCCTTCAGGTGTTAGAGATAGAACATGACCCCAGTGCTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066650.12 ENSMUST00000136884.2 ENSMUST00000148987.8 |
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| CDS GCA 72 bp | CCCAAAACCATTGCCACCTTGCTTCTCCCTCCGTTCTaGAGACAAGCAAACTCCTCAGGAATCAGAACACAA | + |
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Preference number: 6 (lower is better) Translates to: PKTIATLLLPPF*RQANSSGIRTQ Trigger: TTGTGTTCTGATTCCTGAGGAGTTTGCTTGTCTGCAGAACGGAGGGAGAAGCAAGGTGGCAATGGTTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136884.2 |
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| CDS CAA 72 bp | TCTCTGTGTGGCAAGCACTTGTCCAAGGCTAAAAACTaGGTTTCTTTGCCTGCTTGGTCTTTATCTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SLCGKHLSKAKN*VSLPAWSLSVA Trigger: GGCCACAGATAAAGACCAAGCAGGCAAAGAAACCAAGTTTTTAGCCTTGGACAAGTGCTTGCCACACAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066650.12 ENSMUST00000136884.2 ENSMUST00000139796.8 ENSMUST00000148987.8 |
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| CDS CCA 72 bp | GCCATTCAACGTCATACTCTAAGTACTCAGGAGCACTaGGGTCATGTTCTATCTCTAACACCTGAAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: AIQRHTLSTQEH*GHVLSLTPEGS Trigger: ACTTCCTTCAGGTGTTAGAGATAGAACATGACCCCAGTGCTCCTGAGTACTTAGAGTATGACGTTGAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066650.12 ENSMUST00000136884.2 ENSMUST00000148987.8 |
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| CDS CCA 72 bp | AAAACTTGGTTTCTTTGCCTGCTTGGTCTTTATCTGTaGCCTGTTTTAATTTGTAGACCTCTATATTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: KTWFLCLLGLYL*PVLICRPLYFS Trigger: TGAGAAATATAGAGGTCTACAAATTAAAACAGGCCACAGATAAAGACCAAGCAGGCAAAGAAACCAAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148987.8 |
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