Pregenerated sensors for DBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059824Ensembl transcript IDs: ENSMUST00000080885.12, ENSMUST00000211357.2, ENSMUST00000211513.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCATGACGTTCTTCGGGCACCTAGCTGGCCAGACCACTGGCCATaGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGA | + |
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Preference number: 1 (lower is better) Translates to: HHDVLRAPSWPDHWP*DKEEVRCKSEQGTG Trigger: TCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAAGAACGTCATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| 3UTR CCA 90 bp | TGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGACCACTaGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: CLHHDVLRAPSWPDH*PWDKEEVRCKSEQG Trigger: TCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| 3UTR CCA 90 bp | CCCGGGTTCTCAAGATTTATTCAGGATTGTGTTGATGGAGGCGGTTaGATGGATGGGTTCCCCAACATGCTAAGAGCACACACAGGACCC | + |
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Preference number: 1 (lower is better) Translates to: PGFSRFIQDCVDGGG*MDGFPNMLRAHTGP Trigger: GGGTCCTGTGTGTGCTCTTAGCATGTTGGGGAACCCATCCATCCAACCGCCTCCATCAACACAATCCTGAATAAATCTTGAGAACCCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| 3UTR TCA 90 bp | ACAACAGCTGGCTCCCGGGTTCTCAAGATTTATTCAGGATTGTGTTaGTGGAGGCGGTTGGATGGATGGGTTCCCCAACATGCTAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: TTAGSRVLKIYSGLC*WRRLDGWVPQHAKS Trigger: GCTCTTAGCATGTTGGGGAACCCATCCATCCAACCGCCTCCATCAACACAATCCTGAATAAATCTTGAGAACCCGGGAGCCAGCTGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| 3UTR-3UTR GCA 90 bp | TGTCCGCCACAACAGCTGGCTCCCGGGTTCTCAAGATTTATTCAGGATTGTGTTATAAATGTATTTGTCTaGATCATGACGTTCTTCGGG | + |
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Preference number: 2 (lower is better) Translates to: CPPQQLAPGFSRFIQDCVINVFV*IMTFFG Trigger: CCCGAAGAACGTCATGATGCAGACAAATACATTTAT...AACACAATCCTGAATAAATCTTGAGAACCCGGGAGCCAGCTGTTGTGGCGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| 3UTR CCA 72 bp | CATGACGTTCTTCGGGCACCTAGCTGGCCAGACCACTaGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: HDVLRAPSWPDH*PWDKEEVRCKS Trigger: AGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAAGAACGTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| 3UTR CCA 72 bp | GTCAGAGCCAGTAGCTGCTTTGTCCGCCACAACAGCTaGCTCCCGGGTTCTCAAGATTTATTCAGGATTGTG | + |
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Preference number: 3 (lower is better) Translates to: VRASSCFVRHNS*LPGSQDLFRIV Trigger: CACAATCCTGAATAAATCTTGAGAACCCGGGAGCCAGCTGTTGTGGCGGACAAAGCAGCTACTGGCTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| 3UTR TCA 72 bp | GGCTCCCGGGTTCTCAAGATTTATTCAGGATTGTGTTaGTGGAGGCGGTTGGATGGATGGGTTCCCCAACAT | + |
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Preference number: 3 (lower is better) Translates to: GSRVLKIYSGLC*WRRLDGWVPQH Trigger: ATGTTGGGGAACCCATCCATCCAACCGCCTCCATCAACACAATCCTGAATAAATCTTGAGAACCCGGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| 3UTR CCA 72 bp | TCAAGATTTATTCAGGATTGTGTTGATGGAGGCGGTTaGATGGATGGGTTCCCCAACATGCTAAGAGCACAC | + |
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Preference number: 3 (lower is better) Translates to: SRFIQDCVDGGG*MDGFPNMLRAH Trigger: GTGTGCTCTTAGCATGTTGGGGAACCCATCCATCCAACCGCCTCCATCAACACAATCCTGAATAAATCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS-3UTR TCA 90 bp | TTCGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTATGGCCTGGAATGCTTaGCAGGGCGAGATCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: FGHLAGQTTGHGTRRKSGMAWNA*QGEISG Trigger: CCCGCTGATCTCGCCCTGTCAAGCATTCCAGGCCAT...ACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | CGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTGTCCTTCAGGAGACAGCTaGCCGGTTCTTTGGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RAPSWPDHWPWDKEEVRCPSGDS*PVLWAC Trigger: GCAAGCCCAAAGAACCGGCCAGCTGTCTCCTGAAGG...ACACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS-3UTR GCA 90 bp | TTCTTCGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGCTTGCTGTTTCCCTaGAGAAGGCTCCTCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: FFGHLAGQTTGHGTRRKSGLLFP*RRLLSP Trigger: TGGGCTGAGGAGCCTTCTGCAGGGAAACAGCAAGCC...TGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | TTCGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTAGCTGGCCGGTTCTTTaGGCTTGCTGTTTCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FGHLAGQTTGHGTRRKSGSWPVL*ACCFPA Trigger: TGCAGGGAAACAGCAAGCCCAAAGAACCGGCCAGCT...ACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR TCA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGATGGCCTGGAATGCTTaGCAGGGCGAGATCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GTRRKSGVSLSKEQDSALMAWNA*QGEISG Trigger: CCCGCTGATCTCGCCCTGTCAAGCATTCCAGGCCAT...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR TCA 90 bp | CACTGGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGAATGGCCTGGAATGCTTaGCAGGGCGAGATCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: HWPWDKEEVRCKSEQGTGMAWNA*QGEISG Trigger: CCCGCTGATCTCGCCCTGTCAAGCATTCCAGGCCAT...TCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | CCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCACCTCCACGGTGTCTaGGTCCACAGGACTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PWDKEEVRCKSEQGTGLCHLHGV*VHRTGC Trigger: ACACCCAGTCCTGTGGACCCAGACACCGTGGAGGTG...GCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | ACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGCACACCTCCACGGTGTCTaGGTCCACAGGACTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TRRKSGVSLSKEQDSALAHLHGV*VHRTGC Trigger: ACACCCAGTCCTGTGGACCCAGACACCGTGGAGGTG...TGCCAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR TCA 90 bp | GGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTGTATTCTTCATGATTGGTTaGGGCTTCAGTTCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GHLAGQTTGHGTRRKSGVFFMIG*GFSSSS Trigger: AGAGGAGGAACTGAAGCCTCAACCAATCATGAAGAA...TACACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR GCA 90 bp | ACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGCACCGGTTCTTTGGGCTTaGTGTTTCCCTGCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TRRKSGVSLSKEQDSALAPVLWA*CFPAEG Trigger: GCCTTCTGCAGGGAAACAGCAAGCCCAAAGAACCGG...TGCCAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | CCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCAGCTGGCCGGTTCTTTaGGCTTGCTGTTTCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PWDKEEVRCKSEQGTGLCSWPVL*ACCFPA Trigger: TGCAGGGAAACAGCAAGCCCAAAGAACCGGCCAGCT...GCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGCAGGGTGGTGTTCCTCAGGCACCTaGACTTTCCTTGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RKSGVSLSKEQDSALAGWCSSGT*TFLAFF Trigger: GAAGAAGGCAAGGAAAGTCCAGGTGCCTGAGGAACA...CCACCCTGCCAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | TTCTTCGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGCCCGCACAGATATCTaGTTCTCCTTGAGTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FFGHLAGQTTGHGTRRKSARTDI*FSLSLL Trigger: AAGAAGACTCAAGGAGAACCAGATATCTGTGCGGGC...TGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR GCA 90 bp | ACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGCAAGGGCAGAGTTGCCTTaGGCTCCTTTTCCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TRRKSGVSLSKEQDSALARAELP*APFPSG Trigger: TCCTGAAGGAAAAGGAGCGCAAGGCAACTCTGCCCT...TGCCAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS-3UTR GCA 90 bp | TTCTTCGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCATCTCGACCTCTTGGCTaGTTCATTGTTCTTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: FFGHLAGQTTGHGTRRKSSRPLG*FIVLVP Trigger: AGGTACAAGAACAATGAAGCAGCCAAGAGGTCGAGA...TGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGGGTCAAAAGTCTCATaGCCTGGAATGCTTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: GTRRKSGVSLSKEQDSALGSKVS*PGMLDR Trigger: CCTGTCAAGCATTCCAGGCCATGAGACTTTTGACCC...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR GCA 90 bp | ATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGACCGGCTTGCTGTTTCCCTaGAGAAGGCTCCTCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: INVFVCIMTFFGHLAGQTGLLFP*RRLLSP Trigger: TGGGCTGAGGAGCCTTCTGCAGGGAAACAGCAAGCC...GGTCTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | ATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGACCCCTTCAGGAGACAGCTaGCCGGTTCTTTGGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: INVFVCIMTFFGHLAGQTPSGDS*PVLWAC Trigger: GCAAGCCCAAAGAACCGGCCAGCTGTCTCCTGAAGG...GGTCTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTCAAGATTTATTCAGGATTGTGTTGATGGAGGCGGTTGGATGGATGGGTCACCTCCACGGTGTCTaGGTCCACAGGACTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GSQDLFRIVLMEAVGWMGHLHGV*VHRTGC Trigger: ACACCCAGTCCTGTGGACCCAGACACCGTGGAGGTG...ACCCATCCATCCAACCGCCTCCATCAACACAATCCTGAATAAATCTTGAGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS-3UTR CCA 90 bp | CAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAAGGGTCAAAAGTCTCATaGCCTGGAATGCTTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: QTTGHGTRRKSGVSLSKEGSKVS*PGMLDR Trigger: CCTGTCAAGCATTCCAGGCCATGAGACTTTTGACCC...TTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | CACTGGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGATGTTCCTCAGGCACCTaGACTTTCCTTGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HWPWDKEEVRCKSEQGTGCSSGT*TFLAFF Trigger: GAAGAAGGCAAGGAAAGTCCAGGTGCCTGAGGAACA...TCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGCCCGCACAGATATCTaGTTCTCCTTGAGTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GTRRKSGVSLSKEQDSALARTDI*FSLSLL Trigger: AAGAAGACTCAAGGAGAACCAGATATCTGTGCGGGC...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR TCA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGTTCTTCATGATTGGTTaGGGCTTCAGTTCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GTRRKSGVSLSKEQDSALFFMIG*GFSSSS Trigger: AGAGGAGGAACTGAAGCCTCAACCAATCATGAAGAA...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR TCA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGTCCTTGCCTTCTTCATaGTTGGTTGAGGCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: GTRRKSGVSLSKEQDSALSLPSS*LVEASV Trigger: AACTGAAGCCTCAACCAATCATGAAGAAGGCAAGGA...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR GCA 90 bp | CCACAACAGCTGGCTCCCGGGTTCTCAAGATTTATTCAGGATTGTGTTGATGGACCGGTTCTTTGGGCTTaGTGTTTCCCTGCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PQQLAPGFSRFIQDCVDGPVLWA*CFPAEG Trigger: GCCTTCTGCAGGGAAACAGCAAGCCCAAAGAACCGG...TCCATCAACACAATCCTGAATAAATCTTGAGAACCCGGGAGCCAGCTGTTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS-3UTR GCA 90 bp | ATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGACCCCGGTTCTTTGGGCTTaGTGTTTCCCTGCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: INVFVCIMTFFGHLAGQTPVLWA*CFPAEG Trigger: GCCTTCTGCAGGGAAACAGCAAGCCCAAAGAACCGG...GGTCTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGTGCCTTCTTCATGATTaGTTGAGGCTTCAGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GTRRKSGVSLSKEQDSALCLLHD*LRLQFL Trigger: GAGGAACTGAAGCCTCAACCAATCATGAAGAAGGCA...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | CATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCGCCCGCACAGATATCTaGTTCTCCTTGAGTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: HGTRRKSGVSLSKEQDSAARTDI*FSLSLL Trigger: AAGAAGACTCAAGGAGAACCAGATATCTGTGCGGGC...GGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| 3UTR CAA 72 bp | TGGCTCCCGGGTTCTCAAGATTTATTCAGGATTGTGTaGATGGAGGCGGTTGGATGGATGGGTTCCCCAACA | + |
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Preference number: 4 (lower is better) Translates to: WLPGSQDLFRIV*MEAVGWMGSPT Trigger: TGTTGGGGAACCCATCCATCCAACCGCCTCCATCAACACAATCCTGAATAAATCTTGAGAACCCGGGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS-3UTR GCA 90 bp | CACTGGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGATCTCGACCTCTTGGCTaGTTCATTGTTCTTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: HWPWDKEEVRCKSEQGTGSRPLG*FIVLVP Trigger: AGGTACAAGAACAATGAAGCAGCCAAGAGGTCGAGA...TCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTCAAGATTTATTCAGGATTGTGTTGATGGAGGCGGTTGGATGGATGGGTAGCTGGCCGGTTCTTTaGGCTTGCTGTTTCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GSQDLFRIVLMEAVGWMGSWPVL*ACCFPA Trigger: TGCAGGGAAACAGCAAGCCCAAAGAACCGGCCAGCT...ACCCATCCATCCAACCGCCTCCATCAACACAATCCTGAATAAATCTTGAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS-3UTR CCA 90 bp | CCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCATCTCTCGACCTCTTaGCTGCTTCATTGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PWDKEEVRCKSEQGTGLCHLSTS*LLHCSC Trigger: ACAAGAACAATGAAGCAGCCAAGAGGTCGAGAGATG...GCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | CATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCATCTCTCGACCTCTTaGCTGCTTCATTGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: HGTRRKSGVSLSKEQDSAHLSTS*LLHCSC Trigger: ACAAGAACAATGAAGCAGCCAAGAGGTCGAGAGATG...GGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | TTTATTCAGGATTGTGTTGATGGAGGCGGTTGGATGGATGGGTTCCCCAACATGTGTTCCTCAGGCACCTaGACTTTCCTTGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FIQDCVDGGGWMDGFPNMCSSGT*TFLAFF Trigger: GAAGAAGGCAAGGAAAGTCCAGGTGCCTGAGGAACA...CATGTTGGGGAACCCATCCATCCAACCGCCTCCATCAACACAATCCTGAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS-3UTR GCA 90 bp | AATATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGAGGGCAGAGTTGCCTTaGGCTCCTTTTCCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NINVFVCIMTFFGHLAGQRAELP*APFPSG Trigger: TCCTGAAGGAAAAGGAGCGCAAGGCAACTCTGCCCT...CTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS-3UTR CCA 90 bp | GGTTCTCAAGATTTATTCAGGATTGTGTTGATGGAGGCGGTTGGATGGATGGGTGGGTCAAAAGTCTCATaGCCTGGAATGCTTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: GSQDLFRIVLMEAVGWMGGSKVS*PGMLDR Trigger: CCTGTCAAGCATTCCAGGCCATGAGACTTTTGACCC...ACCCATCCATCCAACCGCCTCCATCAACACAATCCTGAATAAATCTTGAGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS-3UTR TCA 90 bp | CCACAACAGCTGGCTCCCGGGTTCTCAAGATTTATTCAGGATTGTGTTGATGGATCCTTGCCTTCTTCATaGTTGGTTGAGGCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: PQQLAPGFSRFIQDCVDGSLPSS*LVEASV Trigger: AACTGAAGCCTCAACCAATCATGAAGAAGGCAAGGA...TCCATCAACACAATCCTGAATAAATCTTGAGAACCCGGGAGCCAGCTGTTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS-3UTR GCA 90 bp | AATATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGTCTCGACCTCTTGGCTaGTTCATTGTTCTTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: NINVFVCIMTFFGHLAGQSRPLG*FIVLVP Trigger: AGGTACAAGAACAATGAAGCAGCCAAGAGGTCGAGA...CTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | AATATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGTGCCTTCTTCATGATTaGTTGAGGCTTCAGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: NINVFVCIMTFFGHLAGQCLLHD*LRLQFL Trigger: GAGGAACTGAAGCCTCAACCAATCATGAAGAAGGCA...CTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CCA 90 bp | AATATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGCATCTCTCGACCTCTTaGCTGCTTCATTGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: NINVFVCIMTFFGHLAGQHLSTS*LLHCSC Trigger: ACAAGAACAATGAAGCAGCCAAGAGGTCGAGAGATG...CTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS GCA 90 bp | TTTCCAGGCCGGGTCCCGGGACGGGGGCTGAGGGCAGAGTTGCCTTaGGCTCCTTTTCCTTCAGGAGACAGCTGGCCGGTTCTTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: FPGRVPGRGLRAELP*APFPSGDSWPVLWA Trigger: AGCCCAAAGAACCGGCCAGCTGTCTCCTGAAGGAAAAGGAGCGCAAGGCAACTCTGCCCTCAGCCCCCGTCCCGGGACCCGGCCTGGAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS-3UTR CAA 90 bp | CGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTGTCAGCTGGCCGGTTCTTaGGGCTTGCTGTTTCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: RAPSWPDHWPWDKEEVRCQLAGS*GLLFPC Trigger: GCAGGGAAACAGCAAGCCCAAAGAACCGGCCAGCTG...ACACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS GCA 90 bp | AGAAGGCGTCCAGGTCCACGTATTCCACGTCCCCGAAAGGCAAAGTaGGTTCCCACAGCAGCGGCGCAAAAAGACTCGGGCCAGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: RRRPGPRIPRPRKAK*VPTAAAQKDSGQPQ Trigger: CTGTGGCTGGCCCGAGTCTTTTTGCGCCGCTGCTGTGGGAACGCACTTTGCCTTTCGGGGACGTGGAATACGTGGACCTGGACGCCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS-3UTR CAA 90 bp | TTCGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTGGGCTGAGGGCAGAGTaGCCTTGCGCTCCTTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: FGHLAGQTTGHGTRRKSGGLRAE*PCAPFP Trigger: AGGAAAAGGAGCGCAAGGCAACTCTGCCCTCAGCCC...ACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS-3UTR CAA 90 bp | GGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTGTAGCCGGTTCTTTGGGCTaGCTGTTTCCCTGCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GHLAGQTTGHGTRRKSGVAGSLG*LFPCRR Trigger: CCTTCTGCAGGGAAACAGCAAGCCCAAAGAACCGGC...TACACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | AGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGCAGGGTGGGCCGGTTCTTTGGGCTaGCTGTTTCCCTGCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKSGVSLSKEQDSALAGWAGSLG*LFPCRR Trigger: CCTTCTGCAGGGAAACAGCAAGCCCAAAGAACCGGC...CCACCCTGCCAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGGGCTGAGGGCAGAGTaGCCTTGCGCTCCTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTRRKSGVSLSKEQDSALGLRAE*PCAPFP Trigger: AGGAAAAGGAGCGCAAGGCAACTCTGCCCTCAGCCC...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS-3UTR CAA 90 bp | CATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCAGCTGGCCGGTTCTTaGGGCTTGCTGTTTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HGTRRKSGVSLSKEQDSAQLAGS*GLLFPC Trigger: GCAGGGAAACAGCAAGCCCAAAGAACCGGCCAGCTG...GGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | TTCGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTGCATCTCTCGACCTCTaGGCTGCTTCATTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGHLAGQTTGHGTRRKSGASLDL*AASLFL Trigger: CAAGAACAATGAAGCAGCCAAGAGGTCGAGAGATGC...ACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | CACTGGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGAGAGGGCAGAGTTGCCTaGCGCTCCTTTTCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HWPWDKEEVRCKSEQGTGEGRVA*RSFSFR Trigger: CCTGAAGGAAAAGGAGCGCAAGGCAACTCTGCCCTC...TCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS-3UTR CAA 90 bp | TTCTTCGGGCACCTAGCTGGCCAGACCACTGGCCATGGGACAAGGAGGAAGTCAGCATCTCTCGACCTCTaGGCTGCTTCATTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FFGHLAGQTTGHGTRRKSASLDL*AASLFL Trigger: CAAGAACAATGAAGCAGCCAAGAGGTCGAGAGATGC...TGACTTCCTCCTTGTCCCATGGCCAGTGGTCTGGCCAGCTAGGTGCCCGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGCTGCTTCATTGTTCTaGTACCTCCGGCTCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GTRRKSGVSLSKEQDSALAASLF*YLRLQY Trigger: GTACTGGAGCCGGAGGTACAAGAACAATGAAGCAGC...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | CACTGGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGAGCTGCTTCATTGTTCTaGTACCTCCGGCTCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HWPWDKEEVRCKSEQGTGAASLF*YLRLQY Trigger: GTACTGGAGCCGGAGGTACAAGAACAATGAAGCAGC...TCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGCTTCTTCATGATTGGTaGAGGCTTCAGTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTRRKSGVSLSKEQDSALLLHDW*RLQFLL Trigger: GAGGAGGAACTGAAGCCTCAACCAATCATGAAGAAG...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | CACTGGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGAGCATCTCTCGACCTCTaGGCTGCTTCATTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HWPWDKEEVRCKSEQGTGASLDL*AASLFL Trigger: CAAGAACAATGAAGCAGCCAAGAGGTCGAGAGATGC...TCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | AATATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGCAGCTGGCCGGTTCTTaGGGCTTGCTGTTTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NINVFVCIMTFFGHLAGQQLAGS*GLLFPC Trigger: GCAGGGAAACAGCAAGCCCAAAGAACCGGCCAGCTG...CTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | CATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTTCTTCATGATTGGTaGAGGCTTCAGTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HGTRRKSGVSLSKEQDSALLHDW*RLQFLL Trigger: GAGGAGGAACTGAAGCCTCAACCAATCATGAAGAAG...GGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | CAGACCACTGGCCATGGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACTTCTTCATGATTGGTaGAGGCTTCAGTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTTGHGTRRKSGVSLSKELLHDW*RLQFLL Trigger: GAGGAGGAACTGAAGCCTCAACCAATCATGAAGAAG...TTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCCATGGCCAGTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | GGGACAAGGAGGAAGTCAGGTGTAAGTCTGAGCAAGGAACAGGACTCTGCCCTGGATATCTGGTTCTCCTaGAGTCTTCTTGCATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTRRKSGVSLSKEQDSALDIWFS*SLLASL Trigger: GAGAGATGCAAGAAGACTCAAGGAGAACCAGATATC...CAGGGCAGAGTCCTGTTCCTTGCTCAGACTTACACCTGACTTCCTCCTTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS GCA 90 bp | TATCTGGTTCTCCTTGAGTCTTCTTGCATCTCTCGACCTCTTGGCTaGTTCATTGTTCTTGTACCTCCGGCTCCAGTACTTCTCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YLVLLESSCISRPLG*FIVLVPPAPVLLIL Trigger: AAGGATGAGAAGTACTGGAGCCGGAGGTACAAGAACAATGAAGCAGCCAAGAGGTCGAGAGATGCAAGAAGACTCAAGGAGAACCAGATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | AATATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGGCTGCTTCATTGTTCTaGTACCTCCGGCTCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NINVFVCIMTFFGHLAGQAASLF*YLRLQY Trigger: GTACTGGAGCCGGAGGTACAAGAACAATGAAGCAGC...CTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS-3UTR CAA 90 bp | ATAAATGTATTTGTCTGCATCATGACGTTCTTCGGGCACCTAGCTGGCCAGACCGATATCTGGTTCTCCTaGAGTCTTCTTGCATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: INVFVCIMTFFGHLAGQTDIWFS*SLLASL Trigger: GAGAGATGCAAGAAGACTCAAGGAGAACCAGATATC...GGTCTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAATACATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS CCA 72 bp | CCCACCGCCACTAACGGCCCCACTCGGGGCATCGGCTaGGCCCGCCGTTTCCAGGCCGGGTCCCGGGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: PTATNGPTRGIG*ARRFQAGSRDG Trigger: CCCGTCCCGGGACCCGGCCTGGAAACGGCGGGCCCAGCCGATGCCCCGAGTGGGGCCGTTAGTGGCGGTGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS CCA 72 bp | CAAGCCGCCACTAACGGCCCCACTCGGGGCATCGGCTaGGCCCGCCGTTTCCAGGCCGGGTCCCGGGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: QAATNGPTRGIG*ARRFQAGSRDG Trigger: CCCGTCCCGGGACCCGGCCTGGAAACGGCGGGCCCAGCCGATGCCCCGAGTGGGGCCGTTAGTGGCGGCTTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211357.2 |
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| CDS CCA 72 bp | GGACTGGGTGTGTCCCTAGATGTCAAGCCTGCGCGGTaGCCGCCGGCGGCTCCCAGAGTGGCCCGCGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLGVSLDVKPAR*PPAAPRVARAG Trigger: CCCCGCGCGGGCCACTCTGGGAGCCGCCGGCGGCCACCGCGCAGGCTTGACATCTAGGGACACACCCAGTCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS GCA 72 bp | GTCCACAGGACTGGGTGTGTCCCTAGATGTCAAGCCTaGGCGGTGGCCGCCGGCGGCTCCCAGAGTGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VHRTGCVPRCQA*AVAAGGSQSGP Trigger: CGGGCCACTCTGGGAGCCGCCGGCGGCCACCGCGCAGGCTTGACATCTAGGGACACACCCAGTCCTGTGGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS CAA 72 bp | CCGGGTCCCGGGACGGGGGCTGAGGGCAGAGTTGCCTaGCGCTCCTTTTCCTTCAGGAGACAGCTGGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGPGTGAEGRVA*RSFSFRRQLAG Trigger: ACCGGCCAGCTGTCTCCTGAAGGAAAAGGAGCGCAAGGCAACTCTGCCCTCAGCCCCCGTCCCGGGACCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS CAA 90 bp | CCGCCGTTTCCAGGCCGGGTCCCGGGACGGGGGCTGAGGGCAGAGTaGCCTTGCGCTCCTTTTCCTTCAGGAGACAGCTGGCCGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPFPGRVPGRGLRAE*PCAPFPSGDSWPVL Trigger: AAGAACCGGCCAGCTGTCTCCTGAAGGAAAAGGAGCGCAAGGCAACTCTGCCCTCAGCCCCCGTCCCGGGACCCGGCCTGGAAACGGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS GCA 72 bp | CGGGTCCCGGGACGGGGGCTGAGGGCAGAGTTGCCTTaGGCTCCTTTTCCTTCAGGAGACAGCTGGCCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RVPGRGLRAELP*APFPSGDSWPV Trigger: AACCGGCCAGCTGTCTCCTGAAGGAAAAGGAGCGCAAGGCAACTCTGCCCTCAGCCCCCGTCCCGGGACCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS CAA 90 bp | GTTTCCAGGCCGGGTCCCGGGACGGGGGCTGAGGGCAGAGTTGCCTaGCGCTCCTTTTCCTTCAGGAGACAGCTGGCCGGTTCTTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSRPGPGTGAEGRVA*RSFSFRRQLAGSLG Trigger: GCCCAAAGAACCGGCCAGCTGTCTCCTGAAGGAAAAGGAGCGCAAGGCAACTCTGCCCTCAGCCCCCGTCCCGGGACCCGGCCTGGAAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 |
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| CDS GCA 72 bp | CCAGGTCCACGTATTCCACGTCCCCGAAAGGCAAAGTaGGTTCCCACAGCAGCGGCGCAAAAAGACTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGPRIPRPRKAK*VPTAAAQKDSG Trigger: GCCCGAGTCTTTTTGCGCCGCTGCTGTGGGAACGCACTTTGCCTTTCGGGGACGTGGAATACGTGGACCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080885.12 |
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| CDS CAA 72 bp | GGTGTGTCCCTAGATGTCAAGCAGCTGGCCGGTTCTTaGGGCTTGCTGTTTCCCTGCAGAAGGCTCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GVSLDVKQLAGS*GLLFPCRRLLS Trigger: GCTGAGGAGCCTTCTGCAGGGAAACAGCAAGCCCAAAGAACCGGCCAGCTGCTTGACATCTAGGGACACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211513.2 |
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| CDS TCA 72 bp | CCAGGAAGGCAGCCCGCACAGATATCTGGTTCTCCTTaGGTCTTCTTGCATCTCTCGACCTCTTGGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGRQPAQISGSP*VFLHLSTSWLL Trigger: AAGCAGCCAAGAGGTCGAGAGATGCAAGAAGACTCAAGGAGAACCAGATATCTGTGCGGGCTGCCTTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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| CDS CAA 72 bp | TCCAGGAAGGCAGCCCGCACAGATATCTGGTTCTCCTaGAGTCTTCTTGCATCTCTCGACCTCTTGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRKAARTDIWFS*SLLASLDLLAA Trigger: AGCAGCCAAGAGGTCGAGAGATGCAAGAAGACTCAAGGAGAACCAGATATCTGTGCGGGCTGCCTTCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080885.12 ENSMUST00000211357.2 ENSMUST00000211513.2 |
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