Pregenerated sensors for DBNDD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017734Ensembl transcript IDs: ENSMUST00000017878.3, ENSMUST00000069385.15, ENSMUST00000109349.9, ENSMUST00000109350.9, ENSMUST00000143690.8, ENSMUST00000149287.8
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAAGCAGCTGCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTaGAAGTCCTACCTCAGAAGAAAAGCACTGTGGGGGCGTGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RKQLRLVPPHLSSLT*KSYLRRKALWGRGS Trigger: GCTGCCACGCCCCCACAGTGCTTTTCTTCTGAGGTAGGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGCAGCTGCTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| 3UTR CCA 90 bp | AGAGACACTGGCTTAGGAGACTCTGTGGAAGACAACAGGATCATCTaGGGGCAGGAGGGGACTAAGAAAGCAGCTGCGTCTTGTCCCACC | + |
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Preference number: 1 (lower is better) Translates to: RDTGLGDSVEDNRII*GQEGTKKAAASCPT Trigger: GGTGGGACAAGACGCAGCTGCTTTCTTAGTCCCCTCCTGCCCCCAGATGATCCTGTTGTCTTCCACAGAGTCTCCTAAGCCAGTGTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| 3UTR CCA 90 bp | GCTGATGCTTTGCCAGCCATCCTAAACACAAGGCATGGGCAGGAATaGGCATCCGTGCCCTGGATGGCTAAGGAAAACCACCCCAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: ADALPAILNTRHGQE*ASVPWMAKENHPKA Trigger: TGCTTTGGGGTGGTTTTCCTTAGCCATCCAGGGCACGGATGCCCATTCCTGCCCATGCCTTGTGTTTAGGATGGCTGGCAAAGCATCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR CCA 90 bp | GATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTaGCTTAGGAGACTCTGTGGAAGACAACAGGATCATCTGGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: DNWKVELLRTSPQRH*LRRLCGRQQDHLGA Trigger: TGCCCCCAGATGATCCTGTTGTCTTCCACAGAGTCTCCTAAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| 3UTR TCA 90 bp | TCGCCACTTCATCTCGTTTTCTGCCTTTTTCAAAGTCACGCTGGCTaGTGCTTTGCCAGCCATCCTAAACACAAGGCATGGGCAGGAATG | + |
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Preference number: 1 (lower is better) Translates to: SPLHLVFCLFQSHAG*CFASHPKHKAWAGM Trigger: CATTCCTGCCCATGCCTTGTGTTTAGGATGGCTGGCAAAGCATCAGCCAGCGTGACTTTGAAAAAGGCAGAAAACGAGATGAAGTGGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR TCA 90 bp | GTGTGGCCTGTCCCAGGGAACAGCAACCATGCTTGTTTCAAAAAGTaGCCACCGTTTTGGAACCCTACCTTTGTTTCTGAAGGTTGTAAG | + |
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Preference number: 1 (lower is better) Translates to: VWPVPGNSNHACFKK*PPFWNPTFVSEGCK Trigger: CTTACAACCTTCAGAAACAAAGGTAGGGTTCCAAAACGGTGGTCACTTTTTGAAACAAGCATGGTTGCTGTTCCCTGGGACAGGCCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR CCA 90 bp | TATCCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTaGAACTCCTCAGAACATCCCCTCAGAGACACTGGCTTAGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: YPVPKRTYRGRITGK*NSSEHPLRDTGLGD Trigger: GTCTCCTAAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| 3UTR CCA 90 bp | TACACGCAGAAAAAGCTTGCTTTAATTAATGTGGTCGTGATGGTTTaGGCTGGTGGTCTTTCCCCTCGCATCTCTGGGATTAACACAACC | + |
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Preference number: 1 (lower is better) Translates to: YTQKKLALINVVVMV*AGGLSPRISGINTT Trigger: GGTTGTGTTAATCCCAGAGATGCGAGGGGAAAGACCACCAGCCCAAACCATCACGACCACATTAATTAAAGCAAGCTTTTTCTGCGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR TCA 90 bp | TCCTTTAGATCTCTGCCTAAGAAACCATCTTGCCATTCTCTTTCCTaGGAGCAGAGGAGGACGCGATCATGCTACGTACTATACTGTACT | + |
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Preference number: 1 (lower is better) Translates to: SFRSLPKKPSCHSLS*EQRRTRSCYVLYCT Trigger: AGTACAGTATAGTACGTAGCATGATCGCGTCCTCCTCTGCTCTCAGGAAAGAGAATGGCAAGATGGTTTCTTAGGCAGAGATCTAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR TCA 90 bp | AAAGCAGCCTGGTGCTCAGTTACTACGGACCTTCCCCAAGGAGCCTaGGATTTTCGGCTTCTTTGGTACGTGGAAATAAATTTATCTCTT | + |
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Preference number: 1 (lower is better) Translates to: KAAWCSVTTDLPQGA*DFRLLWYVEINLSL Trigger: AAGAGATAAATTTATTTCCACGTACCAAAGAAGCCGAAAATCTCAGGCTCCTTGGGGAAGGTCCGTAGTAACTGAGCACCAGGCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR GCA 90 bp | CATGCAGTACTTATGGGACGAAATAATGCCAATTTGTTTATACCCTaGTTGAGCCTGAGTAGGAAGATCACTTCAGTCTACTGGACCTGT | + |
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Preference number: 1 (lower is better) Translates to: HAVLMGRNNANLFIP*LSLSRKITSVYWTC Trigger: ACAGGTCCAGTAGACTGAAGTGATCTTCCTACTCAGGCTCAAGCAGGGTATAAACAAATTGGCATTATTTCGTCCCATAAGTACTGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR TCA 90 bp | TTTGGAACCCTACCTTTGTTTCTGAAGGTTGTAAGGACTGCCTGTTaGCATGACTACCTTGTTAAGACCACCTTTTTCTGCTTCTGTAAC | + |
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Preference number: 1 (lower is better) Translates to: FGTLPLFLKVVRTAC*HDYLVKTTFFCFCN Trigger: GTTACAGAAGCAGAAAAAGGTGGTCTTAACAAGGTAGTCATGTCAACAGGCAGTCCTTACAACCTTCAGAAACAAAGGTAGGGTTCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR TCA 90 bp | AGGAGGACGCGATCATGCTACGTACTATACTGTACTCTATTTACCTaGTTTTCTTCACCAGACAGTAACTCTGTGAAAACAGGAAAGTAC | + |
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Preference number: 1 (lower is better) Translates to: RRTRSCYVLYCTLFT*FSSPDSNSVKTGKY Trigger: GTACTTTCCTGTTTTCACAGAGTTACTGTCTGGTGAAGAAAATCAGGTAAATAGAGTACAGTATAGTACGTAGCATGATCGCGTCCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR TCA 90 bp | ACTGTACTCTATTTACCTGATTTTCTTCACCAGACAGTAACTCTGTaGAAACAGGAAAGTACTTCATCTTACTCAGGACTCTATTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: TVLYLPDFLHQTVTL*KQESTSSYSGLYSQ Trigger: TTGGGAATAGAGTCCTGAGTAAGATGAAGTACTTTCCTGTTTTCACAGAGTTACTGTCTGGTGAAGAAAATCAGGTAAATAGAGTACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR-3UTR TCA 90 bp | AGACCCAGGCTGCCCTCAAATAAGCTAGGAAGCCAAAGCTGTCCCCCTGCCTCCTGCCATTCTCTTTCCTaGGAGCAGAGGAGGACGCGA | + |
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Preference number: 2 (lower is better) Translates to: RPRLPSNKLGSQSCPPASCHSLS*EQRRTR Trigger: TCGCGTCCTCCTCTGCTCTCAGGAAAGAGAATGGCA...GGAGGCAGGGGGACAGCTTTGGCTTCCTAGCTTATTTGAGGGCAGCCTGGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR-3UTR TCA 90 bp | AACAGGATCATCTGGGGGCAGGAGGGGACTAAGAAAGCAGCTGCGTCTTGTCCCCCCTCCCTTTGGTGCTaGAGTAAGGAAAGTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: NRIIWGQEGTKKAAASCPPSLWC*SKESVR Trigger: CCTGACACTTTCCTTACTTCAGCACCAAAGGGAGGG...GGGACAAGACGCAGCTGCTTTCTTAGTCCCCTCCTGCCCCCAGATGATCCTGTT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGACAACAGGATCATCTGGGGGCAGGAGGGGACTAAGAAAGCAGCTGCGTCCCTCCCTTTGGTGCTaGAGTAAGGAAAGTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: WKTTGSSGGRRGLRKQLRPSLWC*SKESVR Trigger: CCTGACACTTTCCTTACTTCAGCACCAAAGGGAGGG...ACGCAGCTGCTTTCTTAGTCCCCTCCTGCCCCCAGATGATCCTGTTGTCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| 3UTR-3UTR CCA 90 bp | CTTACAGCTTCCTTCCAGGTGAGAACAGGCCCCAGGCTGTGCCCTTTTTGCCCAAGGATAACTGGAAAGTaGAACTCCTCAGAACATCCC | + |
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Preference number: 2 (lower is better) Translates to: LTASFQVRTGPRLCPFCPRITGK*NSSEHP Trigger: GGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCT...TGGGCAAAAAGGGCACAGCCTGGGGCCTGTTCTCACCTGGAAGGAAGCTGTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR CAA 90 bp | AGCTTCTCCCCACAGGATCCTTCTCCCTCGGCCTTGCTTGGCTACTaGTGTCCTTTAGATCTCTGCCTAAGAAACCATCTTGCCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: SFSPQDPSPSALLGY*CPLDLCLRNHLAIL Trigger: GAGAATGGCAAGATGGTTTCTTAGGCAGAGATCTAAAGGACACAAGTAGCCAAGCAAGGCCGAGGGAGAAGGATCCTGTGGGGAGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR CAA 90 bp | TTCATCTCGTTTTCTGCCTTTTTCAAAGTCACGCTGGCTGATGCTTaGCCAGCCATCCTAAACACAAGGCATGGGCAGGAATGGGCATCC | + |
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Preference number: 2 (lower is better) Translates to: FISFSAFFKVTLADA*PAILNTRHGQEWAS Trigger: GGATGCCCATTCCTGCCCATGCCTTGTGTTTAGGATGGCTGGCAAAGCATCAGCCAGCGTGACTTTGAAAAAGGCAGAAAACGAGATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR-3UTR TCA 90 bp | CTTACAGCTTCCTTCCAGGTGAGAACAGGCCCCAGGCTGTGCCCTTTTTGCCCACTTGGCAAAATGGAGTaGATGAATGATGGAGATATG | + |
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Preference number: 2 (lower is better) Translates to: LTASFQVRTGPRLCPFCPLGKME*MNDGDM Trigger: CATATCTCCATCATTCATTCACTCCATTTTGCCAAG...TGGGCAAAAAGGGCACAGCCTGGGGCCTGTTCTCACCTGGAAGGAAGCTGTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTTAGTCCCCTTCCTTCCAAACTCACCCAATAAAAAGGTGTCCATGTTTATCCAGCTTCCTTCCAGGTaGGAACAGGCCCCAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: TLVPFLPNSPNKKVSMFIQLPSR*EQAPGC Trigger: ACAGCCTGGGGCCTGTTCTCACCTGGAAGGAAGCTG...GATAAACATGGACACCTTTTTATTGGGTGAGTTTGGAAGGAAGGGGACTAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR-3UTR TCA 90 bp | AGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCCCCTCCCTTTGGTGCTaGAGTAAGGAAAGTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RTYRGRITGKWNSSEHPLPSLWC*SKESVR Trigger: CCTGACACTTTCCTTACTTCAGCACCAAAGGGAGGG...GAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| 3UTR-3UTR TCA 90 bp | ACGCTGGCTGATGCTTTGCCAGCCATCCTAAACACAAGGCATGGGCAGGAATGGCAGACAGTAACTCTGTaGAAACAGGAAAGTACTTCA | + |
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Preference number: 2 (lower is better) Translates to: TLADALPAILNTRHGQEWQTVTL*KQESTS Trigger: TGAAGTACTTTCCTGTTTTCACAGAGTTACTGTCTG...CCATTCCTGCCCATGCCTTGTGTTTAGGATGGCTGGCAAAGCATCAGCCAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGAAAACAGGAAAGTACTTCATCTTACTCAGGACTCTATTCCCAATGCCGACAACAGGATCATCTaGGGGCAGGAGGGGACTAAG | + |
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Preference number: 2 (lower is better) Translates to: LCENRKVLHLTQDSIPNADNRII*GQEGTK Trigger: CTTAGTCCCCTCCTGCCCCCAGATGATCCTGTTGTC...GGCATTGGGAATAGAGTCCTGAGTAAGATGAAGTACTTTCCTGTTTTCACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGACAGTAACTCTGTGAAAACAGGAAAGTACTTCATCTTACTCAGGACTCTAGACAACAGGATCATCTaGGGGCAGGAGGGGACTAAG | + |
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Preference number: 2 (lower is better) Translates to: PDSNSVKTGKYFILLRTLDNRII*GQEGTK Trigger: CTTAGTCCCCTCCTGCCCCCAGATGATCCTGTTGTC...TAGAGTCCTGAGTAAGATGAAGTACTTTCCTGTTTTCACAGAGTTACTGTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR-3UTR TCA 90 bp | TACCAACATGCAGTACTTATGGGACGAAATAATGCCAATTTGTTTATACCCTGCCCCTCCCTTTGGTGCTaGAGTAAGGAAAGTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: YQHAVLMGRNNANLFIPCPSLWC*SKESVR Trigger: CCTGACACTTTCCTTACTTCAGCACCAAAGGGAGGG...GCAGGGTATAAACAAATTGGCATTATTTCGTCCCATAAGTACTGCATGTTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAGAAACCATCTTGCCATTCTCTTTCCTGAGAGCAGAGGAGGACGCGATCATTGGGGTTGGTATCTTTaGAATATGAAGAATGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LRNHLAILFPESRGGRDHWGWYL*NMKNEV Trigger: CACCTCATTCTTCATATTGCAAAGATACCAACCCCA...ATGATCGCGTCCTCCTCTGCTCTCAGGAAAGAGAATGGCAAGATGGTTTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR-3UTR CCA 90 bp | GTTCATCTAGAGCCTGCCTTCTCCAGTATATTCTCTAAACTGCAGTCAGAATTAATAAATGGTTCTGTGTaGCCTGTCCCAGGGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: VHLEPAFSSIFSKLQSELINGSV*PVPGNS Trigger: GCTGTTCCCTGGGACAGGCCACACAGAACCATTTAT...TAATTCTGACTGCAGTTTAGAGAATATACTGGAGAAGGCAGGCTCTAGATGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR TCA 72 bp | CCTGCCTCCACCTCTGAAGTGCAAAGGTTTCAGGGATaGGCCCCACACCCAGCCCAGCCTTCCCACTTAGTG | + |
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Preference number: 3 (lower is better) Translates to: PASTSEVQRFQG*APHPAQPSHLV Trigger: CACTAAGTGGGAAGGCTGGGCTGGGTGTGGGGCTCATCCCTGAAACCTTTGCACTTCAGAGGTGGAGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR CCA 72 bp | AACACAAGGCATGGGCAGGAATGGGCATCCGTGCCCTaGATGGCTAAGGAAAACCACCCCAAAGCAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: NTRHGQEWASVP*MAKENHPKAAW Trigger: CCAGGCTGCTTTGGGGTGGTTTTCCTTAGCCATCCAGGGCACGGATGCCCATTCCTGCCCATGCCTTGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR CCA 72 bp | GGCTTAGGAGACTCTGTGGAAGACAACAGGATCATCTaGGGGCAGGAGGGGACTAAGAAAGCAGCTGCGTCT | + |
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Preference number: 3 (lower is better) Translates to: GLGDSVEDNRII*GQEGTKKAAAS Trigger: AGACGCAGCTGCTTTCTTAGTCCCCTCCTGCCCCCAGATGATCCTGTTGTCTTCCACAGAGTCTCCTAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| 3UTR CCA 72 bp | TTGCCAGCCATCCTAAACACAAGGCATGGGCAGGAATaGGCATCCGTGCCCTGGATGGCTAAGGAAAACCAC | + |
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Preference number: 3 (lower is better) Translates to: LPAILNTRHGQE*ASVPWMAKENH Trigger: GTGGTTTTCCTTAGCCATCCAGGGCACGGATGCCCATTCCTGCCCATGCCTTGTGTTTAGGATGGCTGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR TCA 72 bp | GGCACACCATCCACCATCCTTCCCTCCCTTTGGTGCTaGAGTAAGGAAAGTGTCAGGTCTTCTCCAGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: GTPSTILPSLWC*SKESVRSSPGS Trigger: AGAGCCTGGAGAAGACCTGACACTTTCCTTACTTCAGCACCAAAGGGAGGGAAGGATGGTGGATGGTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| 3UTR GCA 72 bp | ACAGCTTCCTTCCAGGTGAGAACAGGCCCCAGGCTGTaGCCTTTTTGCCCATTCGCCACTTCATCTCGTTTT | + |
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Preference number: 3 (lower is better) Translates to: TASFQVRTGPRL*PFCPFATSSRF Trigger: AAAACGAGATGAAGTGGCGAATGGGCAAAAAGGGCACAGCCTGGGGCCTGTTCTCACCTGGAAGGAAGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR TCA 72 bp | AAAACCGTATCTTCCCCATTTCCAACGTTGATCTCTTaGAGCCTGCCTTTAGGGAGACAGCCTGGGTACACG | + |
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Preference number: 3 (lower is better) Translates to: KTVSSPFPTLIS*SLPLGRQPGYT Trigger: CGTGTACCCAGGCTGTCTCCCTAAAGGCAGGCTTCAAGAGATCAACGTTGGAAATGGGGAAGATACGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR CCA 72 bp | GCACCCCCTATAACCTTCACTATAAATGGTTCTGTGTaGCCTGTCCCAGGGAACAGCAACCATGCTTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: APPITFTINGSV*PVPGNSNHACF Trigger: GAAACAAGCATGGTTGCTGTTCCCTGGGACAGGCCACACAGAACCATTTATAGTGAAGGTTATAGGGGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR CCA 72 bp | AAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTaGCTTAGGAGACTCTCAGAAGAAAAGCACTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: KVELLRTSPQRH*LRRLSEEKHCG Trigger: CCCACAGTGCTTTTCTTCTGAGAGTCTCCTAAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149287.8 |
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| 3UTR TCA 72 bp | CATCTCGTTTTCTGCCTTTTTCAAAGTCACGCTGGCTaGTGCTTTGCCAGCCATCCTAAACACAAGGCATGG | + |
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Preference number: 3 (lower is better) Translates to: HLVFCLFQSHAG*CFASHPKHKAW Trigger: CCATGCCTTGTGTTTAGGATGGCTGGCAAAGCATCAGCCAGCGTGACTTTGAAAAAGGCAGAAAACGAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR CCA 72 bp | AAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTaGCTTAGGAGACTCTGTGGAAGACAACAGGATCAT | + |
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Preference number: 3 (lower is better) Translates to: KVELLRTSPQRH*LRRLCGRQQDH Trigger: ATGATCCTGTTGTCTTCCACAGAGTCTCCTAAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| 3UTR CCA 72 bp | CCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTaGAACTCCTCAGAACATCCCCTCAGAGACACTGGC | + |
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Preference number: 3 (lower is better) Translates to: PKRTYRGRITGK*NSSEHPLRDTG Trigger: GCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| 3UTR CCA 72 bp | CATCCTCTAGACTGGGTGCTTCTCAAAGATGTTAGGTaGTGCTGGAATCCGATGCAGTGGCATCAAATTCAG | + |
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Preference number: 3 (lower is better) Translates to: HPLDWVLLKDVR*CWNPMQWHQIQ Trigger: CTGAATTTGATGCCACTGCATCGGATTCCAGCACCACCTAACATCTTTGAGAAGCACCCAGTCTAGAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR TCA 72 bp | CAGTCAGAATTACCTTTTAAACAAAAGTCCAACCGATaGAGCAGCCTGCCTGCCTCCATCTTAGGCCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: QSELPFKQKSNR*SSLPASILGLK Trigger: CTTCAGGCCTAAGATGGAGGCAGGCAGGCTGCTTCATCGGTTGGACTTTTGTTTAAAAGGTAATTCTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR GCA 72 bp | TCGGCCTTGCTTGGCTACTTGTGTCCTTTAGATCTCTaGCTAAGAAACCATCTTGCCATTCTCTTTCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SALLGYLCPLDL*LRNHLAILFPE Trigger: CTCAGGAAAGAGAATGGCAAGATGGTTTCTTAGGCAGAGATCTAAAGGACACAAGTAGCCAAGCAAGGCCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| 3UTR TCA 72 bp | GTCCCAGGGAACAGCAACCATGCTTGTTTCAAAAAGTaGCCACCGTTTTGGAACCCTACCTTTGTTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: VPGNSNHACFKK*PPFWNPTFVSE Trigger: TTCAGAAACAAAGGTAGGGTTCCAAAACGGTGGTCACTTTTTGAAACAAGCATGGTTGCTGTTCCCTGGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| 3UTR CCA 72 bp | AAAAAGCTTGCTTTAATTAATGTGGTCGTGATGGTTTaGGCTGGTGGTCTTTCCCCTCGCATCTCTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: KKLALINVVVMV*AGGLSPRISGI Trigger: AATCCCAGAGATGCGAGGGGAAAGACCACCAGCCCAAACCATCACGACCACATTAATTAAAGCAAGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| 3UTR TCA 72 bp | CTACCTTTGTTTCTGAAGGTTGTAAGGACTGCCTGTTaGCATGACTACCTTGTTAAGACCACCTTTTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPLFLKVVRTAC*HDYLVKTTFFC Trigger: GCAGAAAAAGGTGGTCTTAACAAGGTAGTCATGTCAACAGGCAGTCCTTACAACCTTCAGAAACAAAGGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| 3UTR GCA 72 bp | TGCTTCTCAAAGATGTTAGGTGGTGCTGGAATCCGATaGAGTGGCATCAAATTCAGTGATTTGAAAGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: CFSKMLGGAGIR*SGIKFSDLKGL Trigger: TAACCCTTTCAAATCACTGAATTTGATGCCACTGCATCGGATTCCAGCACCACCTAACATCTTTGAGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| 3UTR GCA 72 bp | TACTTCATCTTACTCAGGACTCTATTCCCAATGCCTTaGGGAGATGAAATTCCCAAGTATCTCTTGGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YFILLRTLFPMP*GDEIPKYLLAK Trigger: TTTTGCCAAGAGATACTTGGGAATTTCATCTCCGCAAGGCATTGGGAATAGAGTCCTGAGTAAGATGAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| 3UTR GCA 72 bp | CTTATGGGACGAAATAATGCCAATTTGTTTATACCCTaGTTGAGCCTGAGTAGGAAGATCACTTCAGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LMGRNNANLFIP*LSLSRKITSVY Trigger: GTAGACTGAAGTGATCTTCCTACTCAGGCTCAAGCAGGGTATAAACAAATTGGCATTATTTCGTCCCATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| 3UTR TCA 72 bp | TGGTGCTGGAATCCGATGCAGTGGCATCAAATTCAGTaGTTTGAAAGGGTTATTGTCTTTCCAAAAGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: WCWNPMQWHQIQ*FERVIVFPKAK Trigger: TTTAGCTTTTGGAAAGACAATAACCCTTTCAAATCACTGAATTTGATGCCACTGCATCGGATTCCAGCACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| 3UTR CCA 72 bp | TGCTTGAGCCTGAGTAGGAAGATCACTTCAGTCTACTaGACCTGTTATGACTTCTATATGTTACTGTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLSLSRKITSVY*TCYDFYMLLYS Trigger: AGAATACAGTAACATATAGAAGTCATAACAGGTCCAGTAGACTGAAGTGATCTTCCTACTCAGGCTCAAGCA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| 3UTR TCA 72 bp | CGATCATGCTACGTACTATACTGTACTCTATTTACCTaGTTTTCTTCACCAGACAGTAACTCTGTGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: RSCYVLYCTLFT*FSSPDSNSVKT Trigger: TGTTTTCACAGAGTTACTGTCTGGTGAAGAAAATCAGGTAAATAGAGTACAGTATAGTACGTAGCATGATCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| 3UTR-3UTR CAA 90 bp | ATATGTTACTGTATTCTTTGTTCATCTAGAGCCTGCCTTCTCCAGTATATTCTCTGGCTTATTTTATTTTaGAGACAGTCTCATGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: ICYCILCSSRACLLQYILWLILF*RQSHET Trigger: GGTCTCATGAGACTGTCTCAAAAATAAAATAAGCCA...GAGAATATACTGGAGAAGGCAGGCTCTAGATGAACAAAGAATACAGTAACATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| 3UTR CCA 72 bp | GTTTCACACTTGTTAAATACCAACATGCAGTACTTATaGGACGAAATAATGCCAATTTGTTTATACCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSHLLNTNMQYL*DEIMPICLYPA Trigger: AGCAGGGTATAAACAAATTGGCATTATTTCGTCCCATAAGTACTGCATGTTGGTATTTAACAAGTGTGAAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | TCCTACCTCAGAAGAAAAGCACTGTGGGGGCGTGGCAGCAGGATAGCGTTAGCGTCCACTCCAGACATCTaGGGAGCTGGCGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYLRRKALWGRGSRIALASTPDI*GAGEDS Trigger: GGAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGA...CGCTAACGCTATCCTGCTGCCACGCCCCCACAGTGCTTTTCTTCTGAGGTAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGGGCCTAGGTCTCCTTTCCATGGAGAACAGCCGGGCTGGTCAGTCTGTTGGTCCTGTCAGACGTaGGTACCAGCAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGPRSPFHGEQPGWSVCWSCQT*VPAGSA Trigger: AGCTGAGCCTGCTGGTACCCACGTCTGACAGGACCA...ACAGACTGACCAGCCCGGCTGTTCTCCATGGAAAGGAGACCTAGGCCCAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | TCCTACCTCAGAAGAAAAGCACTGTGGGGGCGTGGCAGCAGGATAGCGTTAGCGTTGGCGCTCCAGGGCTaGTCTCGGATTTGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SYLRRKALWGRGSRIALALALQG*SRIWVH Trigger: ATGGACCCAAATCCGAGAGCAGCCCTGGAGCGCCAA...CGCTAACGCTATCCTGCTGCCACGCCCCCACAGTGCTTTTCTTCTGAGGTAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR GCA 90 bp | GGAGACTCTCAGAAGAAAAGCACTGTGGGGGCGTGGCAGCAGGATAGCGTTAGCTTGGCGCTCCAGGGCTaGTCTCGGATTTGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDSQKKSTVGAWQQDSVSLALQG*SRIWVH Trigger: ATGGACCCAAATCCGAGAGCAGCCCTGGAGCGCCAA...GCTAACGCTATCCTGCTGCCACGCCCCCACAGTGCTTTTCTTCTGAGAGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGGAGGCTAACTCTCAGGCACACCATCCACCATCCTTCCCTCCCTTTGGTCTCCTCATCAGACTGTaGCAAGGGAGTGTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGEANSQAHHPPSFPPFGLLIRL*QGSVSS Trigger: GGAGGAGACACTCCCTTGGCACAGTCTGATGAGGAG...ACCAAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGAGTTAGCCTCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGACAACAGGATCATCTGGGGGCAGGAGGGGACTAAGAAAGCAGCTGCGTGGTCCTGTCAGACGTaGGTACCAGCAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VEDNRIIWGQEGTKKAAAWSCQT*VPAGSA Trigger: AGCTGAGCCTGCTGGTACCCACGTCTGACAGGACCA...CGCAGCTGCTTTCTTAGTCCCCTCCTGCCCCCAGATGATCCTGTTGTCTTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGAGGCTAACTCTCAGGCACACCATCCACCATCCTTCCCTCCCTTTGGTTTGGACTGCGCAGGTTaGAGGAGTCAGAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGEANSQAHHPPSFPPFGLDCAG*RSQRTR Trigger: CCTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAA...ACCAAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGAGTTAGCCTCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGACAACAGGATCATCTGGGGGCAGGAGGGGACTAAGAAAGCAGCTGCGTTTGGCGCTCCAGGGCTaGTCTCGGATTTGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WKTTGSSGGRRGLRKQLRLALQG*SRIWVH Trigger: ATGGACCCAAATCCGAGAGCAGCCCTGGAGCGCCAA...ACGCAGCTGCTTTCTTAGTCCCCTCCTGCCCCCAGATGATCCTGTTGTCTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CCA 90 bp | AACAGGATCATCTGGGGGCAGGAGGGGACTAAGAAAGCAGCTGCGTCTTGTCCCTTGGACTGCGCAGGTTaGAGGAGTCAGAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRIIWGQEGTKKAAASCPLDCAG*RSQRTR Trigger: CCTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAA...GGGACAAGACGCAGCTGCTTTCTTAGTCCCCTCCTGCCCCCAGATGATCCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR GCA 90 bp | GGAGACTCTCAGAAGAAAAGCACTGTGGGGGCGTGGCAGCAGGATAGCGTTAGCCACTTGGATTTGGACTaGGCAGGTTGGAGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDSQKKSTVGAWQQDSVSHLDLD*AGWRSQ Trigger: CTGACTCCTCCAACCTGCGCAGTCCAAATCCAAGTG...GCTAACGCTATCCTGCTGCCACGCCCCCACAGTGCTTTTCTTCTGAGAGTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGGGGAGGCTAACTCTCAGGCACACCATCCACCATCCTTCCCTCCCTTTCTCCTCATCAGACTGTaGCAAGGGAGTGTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAGEANSQAHHPPSFPPFLLIRL*QGSVSS Trigger: GGAGGAGACACTCCCTTGGCACAGTCTGATGAGGAG...AAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGAGTTAGCCTCCCCTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTGGGGGCAGGAGGGGACTAAGAAAGCAGCTGCGTCTTGTCCCACCTCACACGAGATGCTACCTATaGGGGGTCTTTGTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGGRRGLRKQLRLVPPHTRCYL*GVFVTP Trigger: TGGAGTCACAAAGACCCCCCATAGGTAGCATCTCGT...GTGAGGTGGGACAAGACGCAGCTGCTTTCTTAGTCCCCTCCTGCCCCCAGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CCA 90 bp | GCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTGGAAGTCCTACCTCAGAAGTGGTCCTGTCAGACGTaGGTACCAGCAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASCPTSPLKSHLEVLPQKWSCQT*VPAGSA Trigger: AGCTGAGCCTGCTGGTACCCACGTCTGACAGGACCA...CTTCTGAGGTAGGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR GCA 90 bp | AGCTGCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTGGAAGTCCTACCTCACTTTGTGACTCCAGGTaGAGATGGGACAGGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCVLSHLTSQVSLGSPTSLCDSR*RWDRGK Trigger: CTTCCCCCTGTCCCATCTGCACCTGGAGTCACAAAG...TGAGGTAGGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCAGCTGCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTGGAAGTCCGACTCCAGGTGCAGATaGGACAGGGGGAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKQLRLVPPHLSSLTWKSDSRCR*DRGKTN Trigger: GTTTGTCTTCCCCCTGTCCCATCTGCACCTGGAGTC...GGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGCAGCTGCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CCA 90 bp | GCCATTCTCTTTCCTGAGAGCAGAGGAGGACGCGATCATGCTACGTACTATACTTCCACTCCAGACATCTaGGGAGCTGGCGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: AILFPESRGGRDHATYYTSTPDI*GAGEDS Trigger: GGAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGA...AGTATAGTACGTAGCATGATCGCGTCCTCCTCTGCTCTCAGGAAAGAGAATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | CAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCTTTCCACTCCAGACATCTaGGGAGCTGGCGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDNWKVELLRTSPQRHWLSTPDI*GAGEDS Trigger: GGAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGA...AAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGAGACTCTGTGGAAGACAACAGGATCATCTGGGGGCAGGAGGGGACTAAGTTGGACTGCGCAGGTTaGAGGAGTCAGAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGDSVEDNRIIWGQEGTKLDCAG*RSQRTR Trigger: CCTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAA...CTTAGTCCCCTCCTGCCCCCAGATGATCCTGTTGTCTTCCACAGAGTCTCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGGGAGGCTAACTCTCAGGCACACCATCCACCATCCTTCCCTCCCTTTCCCATCACTTGGATTTaGACTGCGCAGGTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KAGEANSQAHHPPSFPPFPITWI*TAQVGG Trigger: TCCTCCAACCTGCGCAGTCCAAATCCAAGTGATGGG...AAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGAGTTAGCCTCCCCTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAGACTCTGTGGAAGACAACAGGATCATCTGGGGGCAGGAGGGGACTAAGCACTTGGATTTGGACTaGGCAGGTTGGAGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGDSVEDNRIIWGQEGTKHLDLD*AGWRSQ Trigger: CTGACTCCTCCAACCTGCGCAGTCCAAATCCAAGTG...CTTAGTCCCCTCCTGCCCCCAGATGATCCTGTTGTCTTCCACAGAGTCTCCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCAGGCTCAGCTCCTCTaGATGGTCATCCACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQDNWKVELLRTSPQRHWQAQLL*MVIHSR Trigger: TCTGGAGTGGATGACCATCCAGAGGAGCTGAGCCTG...CCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCAGCTGCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTGGAAGTCCCCCATCACTTGGATTTaGACTGCGCAGGTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKQLRLVPPHLSSLTWKSPITWI*TAQVGG Trigger: TCCTCCAACCTGCGCAGTCCAAATCCAAGTGATGGG...GGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGCAGCTGCTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCTGGGCCTAGGTCTCCTTTCCATGGAGAACAGCCGGGCTGGTCAGTCTGTTCAATAAACTCCACTTaGTCCAGTGTGTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: SAGPRSPFHGEQPGWSVCSINST*SSVSTF Trigger: GAATGTGGACACACTGGAGCAAGTGGAGTTTATTGA...ACAGACTGACCAGCCCGGCTGTTCTCCATGGAAAGGAGACCTAGGCCCAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCACTTGGATTTGGACTaGGCAGGTTGGAGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQDNWKVELLRTSPQRHWHLDLD*AGWRSQ Trigger: CTGACTCCTCCAACCTGCGCAGTCCAAATCCAAGTG...CCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | GATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCTTAGGGACTCCAGGTGCAGATaGGACAGGGGGAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DNWKVELLRTSPQRHWLRDSRCR*DRGKTN Trigger: GTTTGTCTTCCCCCTGTCCCATCTGCACCTGGAGTC...CCTAAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCTTGACTCCAGGTGCAGATaGGACAGGGGGAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QDNWKVELLRTSPQRHWLDSRCR*DRGKTN Trigger: GTTTGTCTTCCCCCTGTCCCATCTGCACCTGGAGTC...AAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCAGCTGCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTGGAAGTCCACGAGATGCTACCTATaGGGGGTCTTTGTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQLRLVPPHLSSLTWKSTRCYL*GVFVTP Trigger: TGGAGTCACAAAGACCCCCCATAGGTAGCATCTCGT...GGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGCAGCTGCTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CCA 90 bp | GATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCTTAGGCAGGCTCAGCTCCTCTaGATGGTCATCCACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DNWKVELLRTSPQRHWLRQAQLL*MVIHSR Trigger: TCTGGAGTGGATGACCATCCAGAGGAGCTGAGCCTG...CCTAAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCTTTTGGACTGCGCAGGTTaGAGGAGTCAGAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QDNWKVELLRTSPQRHWLLDCAG*RSQRTR Trigger: CCTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAA...AAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | GCCATTCTCTTTCCTGAGAGCAGAGGAGGACGCGATCATGCTACGTACTATACTCACTTGGATTTGGACTaGGCAGGTTGGAGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AILFPESRGGRDHATYYTHLDLD*AGWRSQ Trigger: CTGACTCCTCCAACCTGCGCAGTCCAAATCCAAGTG...AGTATAGTACGTAGCATGATCGCGTCCTCCTCTGCTCTCAGGAAAGAGAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | CAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCTTCCCATCACTTGGATTTaGACTGCGCAGGTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDNWKVELLRTSPQRHWLPITWI*TAQVGG Trigger: TCCTCCAACCTGCGCAGTCCAAATCCAAGTGATGGG...AAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | AGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCCTCCTCATCAGACTGTaGCAAGGGAGTGTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTYRGRITGKWNSSEHPLLLIRL*QGSVSS Trigger: GGAGGAGACACTCCCTTGGCACAGTCTGATGAGGAG...GAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | TATCCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTCCACTCCAGACATCTaGGGAGCTGGCGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: YPVPKRTYRGRITGKWNSSTPDI*GAGEDS Trigger: GGAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGA...GGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| 3UTR CAA 72 bp | CCACAGGATCCTTCTCCCTCGGCCTTGCTTGGCTACTaGTGTCCTTTAGATCTCTGCCTAAGAAACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQDPSPSALLGY*CPLDLCLRNHL Trigger: AAGATGGTTTCTTAGGCAGAGATCTAAAGGACACAAGTAGCCAAGCAAGGCCGAGGGAGAAGGATCCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR GCA 90 bp | TATCCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTTGGCGCTCCAGGGCTaGTCTCGGATTTGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YPVPKRTYRGRITGKWNSLALQG*SRIWVH Trigger: ATGGACCCAAATCCGAGAGCAGCCCTGGAGCGCCAA...GGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCAGCTGCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTGGAAGTCCTCAATAAACTCCACTTaGTCCAGTGTGTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: RKQLRLVPPHLSSLTWKSSINST*SSVSTF Trigger: GAATGTGGACACACTGGAGCAAGTGGAGTTTATTGA...GGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGCAGCTGCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTCACTCCTCATCAGACTGTaGCAAGGGAGTGTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVPKRTYRGRITGKWNSSLLIRL*QGSVSS Trigger: GGAGGAGACACTCCCTTGGCACAGTCTGATGAGGAG...TGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | ATACCATATCCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGTCCACTCCAGACATCTaGGGAGCTGGCGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPYPVPKRTYRGRITGKWSTPDI*GAGEDS Trigger: GGAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGA...CCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGGATATGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTCACAGGCTCAGCTCCTCTaGATGGTCATCCACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVPKRTYRGRITGKWNSSQAQLL*MVIHSR Trigger: TCTGGAGTGGATGACCATCCAGAGGAGCTGAGCCTG...TGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | CTACTTGTGTCCTTTAGATCTCTGCCTAAGAAACCATCTTGCCATTCTCTTTCCTGGTCCTGTCAGACGTaGGTACCAGCAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVSFRSLPKKPSCHSLSWSCQT*VPAGSA Trigger: AGCTGAGCCTGCTGGTACCCACGTCTGACAGGACCA...GGAAAGAGAATGGCAAGATGGTTTCTTAGGCAGAGATCTAAAGGACACAAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | AGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCCCCATCACTTGGATTTaGACTGCGCAGGTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTYRGRITGKWNSSEHPLPITWI*TAQVGG Trigger: TCCTCCAACCTGCGCAGTCCAAATCCAAGTGATGGG...GAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| 3UTR CAA 72 bp | TTTTCTGCCTTTTTCAAAGTCACGCTGGCTGATGCTTaGCCAGCCATCCTAAACACAAGGCATGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSAFFKVTLADA*PAILNTRHGQE Trigger: TTCCTGCCCATGCCTTGTGTTTAGGATGGCTGGCAAAGCATCAGCCAGCGTGACTTTGAAAAAGGCAGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGTCAATAAACTCCACTTaGTCCAGTGTGTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: RQDNWKVELLRTSPQRHWSINST*SSVSTF Trigger: GAATGTGGACACACTGGAGCAAGTGGAGTTTATTGA...CCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR GCA 90 bp | CAATGCCTTGCGGAGATGAAATTCCCAAGTATCTCTTGGCAAAATGGAGTGAATCTCCTCATCAGACTGTaGCAAGGGAGTGTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCLAEMKFPSISWQNGVNLLIRL*QGSVSS Trigger: GGAGGAGACACTCCCTTGGCACAGTCTGATGAGGAG...ATTCACTCCATTTTGCCAAGAGATACTTGGGAATTTCATCTCCGCAAGGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGAAAACAGGAAAGTACTTCATCTTACTCAGGACTCTATTCCCAATGCCGACTCCAGGTGCAGATaGGACAGGGGGAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCENRKVLHLTQDSIPNADSRCR*DRGKTN Trigger: GTTTGTCTTCCCCCTGTCCCATCTGCACCTGGAGTC...GGCATTGGGAATAGAGTCCTGAGTAAGATGAAGTACTTTCCTGTTTTCACAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | AGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCACGAGATGCTACCTATaGGGGGTCTTTGTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTYRGRITGKWNSSEHPLTRCYL*GVFVTP Trigger: TGGAGTCACAAAGACCCCCCATAGGTAGCATCTCGT...GAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTTGTTTCAAAAAGTGACCACCGTTTTGGAACCCTACCTTTGTTTCTGAAGTGGTCCTGTCAGACGTaGGTACCAGCAGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLVSKSDHRFGTLPLFLKWSCQT*VPAGSA Trigger: AGCTGAGCCTGCTGGTACCCACGTCTGACAGGACCA...CTTCAGAAACAAAGGTAGGGTTCCAAAACGGTGGTCACTTTTTGAAACAAGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | TATCCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTTGGACTGCGCAGGTTaGAGGAGTCAGAGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YPVPKRTYRGRITGKWNSLDCAG*RSQRTR Trigger: CCTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAA...GGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACAGTAACTCTGTGAAAACAGGAAAGTACTTCATCTTACTCAGGACTCTAGACTCCAGGTGCAGATaGGACAGGGGGAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PDSNSVKTGKYFILLRTLDSRCR*DRGKTN Trigger: GTTTGTCTTCCCCCTGTCCCATCTGCACCTGGAGTC...TAGAGTCCTGAGTAAGATGAAGTACTTTCCTGTTTTCACAGAGTTACTGTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | CCAGACAGTAACTCTGTGAAAACAGGAAAGTACTTCATCTTACTCAGGACTCTACAGGCTCAGCTCCTCTaGATGGTCATCCACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDSNSVKTGKYFILLRTLQAQLL*MVIHSR Trigger: TCTGGAGTGGATGACCATCCAGAGGAGCTGAGCCTG...TAGAGTCCTGAGTAAGATGAAGTACTTTCCTGTTTTCACAGAGTTACTGTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | CAATGCCTTGCGGAGATGAAATTCCCAAGTATCTCTTGGCAAAATGGAGTGAATCCCATCACTTGGATTTaGACTGCGCAGGTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QCLAEMKFPSISWQNGVNPITWI*TAQVGG Trigger: TCCTCCAACCTGCGCAGTCCAAATCCAAGTGATGGG...ATTCACTCCATTTTGCCAAGAGATACTTGGGAATTTCATCTCCGCAAGGCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR CCA 90 bp | CCATATCCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACACGAGATGCTACCTATaGGGGGTCTTTGTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PYPVPKRTYRGRITGKWNTRCYL*GVFVTP Trigger: TGGAGTCACAAAGACCCCCCATAGGTAGCATCTCGT...GTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGGATATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| 3UTR CAA 72 bp | TGTTTTGCAGCACGAGTCATAGCTGCAAATTTACATTaGGGCTCCACGACACTGAGCTCAGTGACAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CFAARVIAANLH*GSTTLSSVTEV Trigger: TACTTCTGTCACTGAGCTCAGTGTCGTGGAGCCCAAATGTAAATTTGCAGCTATGACTCGTGCTGCAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| 3UTR CAA 72 bp | ATGGGACGAAATAATGCCAATTTGTTTATACCCTGCTaGAGCCTGAGTAGGAAGATCACTTCAGTCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: MGRNNANLFIPC*SLSRKITSVYW Trigger: CCAGTAGACTGAAGTGATCTTCCTACTCAGGCTCAAGCAGGGTATAAACAAATTGGCATTATTTCGTCCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| CDS-3UTR GCA 90 bp | CTACTTGTGTCCTTTAGATCTCTGCCTAAGAAACCATCTTGCCATTCTCTTTCCTCAATAAACTCCACTTaGTCCAGTGTGTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVSFRSLPKKPSCHSLSSINST*SSVSTF Trigger: GAATGTGGACACACTGGAGCAAGTGGAGTTTATTGA...GGAAAGAGAATGGCAAGATGGTTTCTTAGGCAGAGATCTAAAGGACACAAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
||
| CDS-3UTR GCA 90 bp | TACCAACATGCAGTACTTATGGGACGAAATAATGCCAATTTGTTTATACCCTGCTCAATAAACTCCACTTaGTCCAGTGTGTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: YQHAVLMGRNNANLFIPCSINST*SSVSTF Trigger: GAATGTGGACACACTGGAGCAAGTGGAGTTTATTGA...GCAGGGTATAAACAAATTGGCATTATTTCGTCCCATAAGTACTGCATGTTGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| 3UTR CAA 72 bp | GCTGGAATCCGATGCAGTGGCATCAAATTCAGTGATTaGAAAGGGTTATTGTCTTTCCAAAAGCTAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AGIRCSGIKFSD*KGLLSFQKLKS Trigger: AGATTTTAGCTTTTGGAAAGACAATAACCCTTTCAAATCACTGAATTTGATGCCACTGCATCGGATTCCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGCACTGTGGGGGCGTGGCAGCAGGATAGCGTTAGCGGTAAAGCAGGGGCCGGAGCCGCAGCTGTaGGCGCTCCAGGGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKALWGRGSRIALAVKQGPEPQL*ALQGCS Trigger: AGAGCAGCCCTGGAGCGCCAACAGCTGCGGCTCCGG...CCCCTGCTTTACCGCTAACGCTATCCTGCTGCCACGCCCCCACAGTGCTTTTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGAGGCTAACTCTCAGGCACACCATCCACCATCCTTCCCTCCCTTTGGTCCGGAGCCGCAGCTGTaGGCGCTCCAGGGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGEANSQAHHPPSFPPFGPEPQL*ALQGCS Trigger: AGAGCAGCCCTGGAGCGCCAACAGCTGCGGCTCCGG...ACCAAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGAGTTAGCCTCCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CAA 90 bp | TCCTACCTCAGAAGAAAAGCACTGTGGGGGCGTGGCAGCAGGATAGCGTTAGCGCCGGAGCCGCAGCTGTaGGCGCTCCAGGGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SYLRRKALWGRGSRIALAPEPQL*ALQGCS Trigger: AGAGCAGCCCTGGAGCGCCAACAGCTGCGGCTCCGG...CGCTAACGCTATCCTGCTGCCACGCCCCCACAGTGCTTTTCTTCTGAGGTAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| CDS CCA 90 bp | GTGGTCCTGTCAGACGTGGGTACCAGCAGGCTCAGCTCCTCTGGATaGTCATCCACTCCAGACATCTGGGGAGCTGGCGAGGACTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VVLSDVGTSRLSSSG*SSTPDIWGAGEDSS Trigger: TGAGGAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGATGACCATCCAGAGGAGCTGAGCCTGCTGGTACCCACGTCTGACAGGACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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| CDS CCA 90 bp | GGATGTGGTCCTGTCAGACGTGGGTACCAGCAGGCTCAGCTCCTCTaGATGGTCATCCACTCCAGACATCTGGGGAGCTGGCGAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: GCGPVRRGYQQAQLL*MVIHSRHLGSWRGL Trigger: GAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGATGACCATCCAGAGGAGCTGAGCCTGCTGGTACCCACGTCTGACAGGACCACATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
||
| CDS CCA 90 bp | AGTCAGAGGACAAGGAGGAGGTCCGGGATGTGGTCCTGTCAGACGTaGGTACCAGCAGGCTCAGCTCCTCTGGATGGTCATCCACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQRTRRRSGMWSCQT*VPAGSAPLDGHPLQ Trigger: CTGGAGTGGATGACCATCCAGAGGAGCTGAGCCTGCTGGTACCCACGTCTGACAGGACCACATCCCGGACCTCCTCCTTGTCCTCTGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CAA 90 bp | GATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCTTAGGCCGGAGCCGCAGCTGTaGGCGCTCCAGGGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DNWKVELLRTSPQRHWLRPEPQL*ALQGCS Trigger: AGAGCAGCCCTGGAGCGCCAACAGCTGCGGCTCCGG...CCTAAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS CCA 90 bp | GCTCAGCTCCTCTGGATGGTCATCCACTCCAGACATCTGGGGAGCTaGCGAGGACTCCTCACAAGGCAAGAACACATCTGCTCCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQLLWMVIHSRHLGS*RGLLTRQEHICSIL Trigger: CAGGATGGAGCAGATGTGTTCTTGCCTTGTGAGGAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGATGACCATCCAGAGGAGCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGCACTGTGGGGGCGTGGCAGCAGGATAGCGTTAGCGGTAAAGCAGGGGTTTGGACTGCGCAGGTaGGAGGAGTCAGAGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKALWGRGSRIALAVKQGFGLRR*EESEDK Trigger: CTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAAA...CCCCTGCTTTACCGCTAACGCTATCCTGCTGCCACGCCCCCACAGTGCTTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCTGGGCCTAGGTCTCCTTTCCATGGAGAACAGCCGGGCTGGTCAGTCTGTTTTGGACTGCGCAGGTaGGAGGAGTCAGAGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAGPRSPFHGEQPGWSVCFGLRR*EESEDK Trigger: CTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAAA...ACAGACTGACCAGCCCGGCTGTTCTCCATGGAAAGGAGACCTAGGCCCAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS GCA 90 bp | AAGACAAACTCTGTCTCTGGCTGTAAAATGTCCTCAAAGAACTTCTaGCTCTCCCGGAGCCGCAGCTGTTGGCGCTCCAGGGCTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KTNSVSGCKMSSKNF*LSRSRSCWRSRAAL Trigger: GAGAGCAGCCCTGGAGCGCCAACAGCTGCGGCTCCGGGAGAGGCAGAAGTTCTTTGAGGACATTTTACAGCCAGAGACAGAGTTTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTCACCGGAGCCGCAGCTGTaGGCGCTCCAGGGCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVPKRTYRGRITGKWNSSPEPQL*ALQGCS Trigger: AGAGCAGCCCTGGAGCGCCAACAGCTGCGGCTCCGG...TGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGGGGAGGCTAACTCTCAGGCACACCATCCACCATCCTTCCCTCCCTTTTTTGGACTGCGCAGGTaGGAGGAGTCAGAGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: KAGEANSQAHHPPSFPPFFGLRR*EESEDK Trigger: CTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAAA...AAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGAGTTAGCCTCCCCTGCTTT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS-3UTR CAA 90 bp | GCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTGGAAGTCCTACCTCAGAAGCTCCTCCCCCATCACTaGGATTTGGACTGCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASCPTSPLKSHLEVLPQKLLPHH*DLDCAG Trigger: ACCTGCGCAGTCCAAATCCAAGTGATGGGGGAGGAG...CTTCTGAGGTAGGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
||
| CDS-3UTR CAA 90 bp | TCTCAGGCACACCATCCACCATCCTTCCCTCCCTTTGGTGCTGAAGTAAGGAAACTCCTCCCCCATCACTaGGATTTGGACTGCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQAHHPPSFPPFGAEVRKLLPHH*DLDCAG Trigger: ACCTGCGCAGTCCAAATCCAAGTGATGGGGGAGGAG...TTTCCTTACTTCAGCACCAAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
||
| CDS GCA 90 bp | CATCTGGGGAGCTGGCGAGGACTCCTCACAAGGCAAGAACACATCTaGTCCATCCTGATCCGCAAGATCAATAAACTCCACTTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLGSWRGLLTRQEHI*SILIRKINKLHLLQ Trigger: CTGGAGCAAGTGGAGTTTATTGATCTTGCGGATCAGGATGGAGCAGATGTGTTCTTGCCTTGTGAGGAGTCCTCGCCAGCTCCCCAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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| CDS-3UTR CAA 90 bp | GATAACTGGAAAGTGGAACTCCTCAGAACATCCCCTCAGAGACACTGGCTTAGGCTCCTCCCCCATCACTaGGATTTGGACTGCGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: DNWKVELLRTSPQRHWLRLLPHH*DLDCAG Trigger: ACCTGCGCAGTCCAAATCCAAGTGATGGGGGAGGAG...CCTAAGCCAGTGTCTCTGAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| CDS TCA 90 bp | GCTGGCGAGGACTCCTCACAAGGCAAGAACACATCTGCTCCATCCTaGTCCGCAAGATCAATAAACTCCACTTGCTCCAGTGTGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: AGEDSSQGKNTSAPS*SARSINSTCSSVST Trigger: TGTGGACACACTGGAGCAAGTGGAGTTTATTGATCTTGCGGATCAGGATGGAGCAGATGTGTTCTTGCCTTGTGAGGAGTCCTCGCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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| CDS-3UTR CAA 90 bp | GGGGAGGCTAACTCTCAGGCACACCATCCACCATCCTTCCCTCCCTTTGGTGCTATCAATAAACTCCACTaGCTCCAGTGTGTCCACATT | + |
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Preference number: 5 (lower is better) Translates to: GEANSQAHHPPSFPPFGAINKLH*LQCVHI Trigger: AATGTGGACACACTGGAGCAAGTGGAGTTTATTGAT...AGCACCAAAGGGAGGGAAGGATGGTGGATGGTGTGCCTGAGAGTTAGCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| CDS-3UTR CAA 90 bp | GCAGCTGCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTGGAAGTCCTACCTATCAATAAACTCCACTaGCTCCAGTGTGTCCACATT | + |
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Preference number: 5 (lower is better) Translates to: AAASCPTSPLKSHLEVLPINKLH*LQCVHI Trigger: AATGTGGACACACTGGAGCAAGTGGAGTTTATTGAT...AGGTAGGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| CDS-3UTR CAA 90 bp | AGCTGCGTCTTGTCCCACCTCACCTCTCAAGTCTCACTTGGAAGTCCTACCTCAATCAATAAACTCCACTaGCTCCAGTGTGTCCACATT | + |
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Preference number: 5 (lower is better) Translates to: SCVLSHLTSQVSLGSPTSINKLH*LQCVHI Trigger: AATGTGGACACACTGGAGCAAGTGGAGTTTATTGAT...TGAGGTAGGACTTCCAAGTGAGACTTGAGAGGTGAGGTGGGACAAGACGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 |
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| CDS-3UTR CAA 90 bp | TCTCAGAAGAAAAGCACTGTGGGGGCGTGGCAGCAGGATAGCGTTAGCGGTAAAATCAATAAACTCCACTaGCTCCAGTGTGTCCACATT | + |
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Preference number: 5 (lower is better) Translates to: SQKKSTVGAWQQDSVSGKINKLH*LQCVHI Trigger: AATGTGGACACACTGGAGCAAGTGGAGTTTATTGAT...TTTACCGCTAACGCTATCCTGCTGCCACGCCCCCACAGTGCTTTTCTTCTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149287.8 |
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| CDS-3UTR CAA 90 bp | TATCCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGAACTCCTTTGGACTGCGCAGGTaGGAGGAGTCAGAGGACAAG | + |
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Preference number: 5 (lower is better) Translates to: YPVPKRTYRGRITGKWNSFGLRR*EESEDK Trigger: CTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAAA...GGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| CDS-3UTR CAA 90 bp | GTTTCAAAAAGTGACCACCGTTTTGGAACCCTACCTTTGTTTCTGAAGGTTGTACTCCTCCCCCATCACTaGGATTTGGACTGCGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: VSKSDHRFGTLPLFLKVVLLPHH*DLDCAG Trigger: ACCTGCGCAGTCCAAATCCAAGTGATGGGGGAGGAG...TACAACCTTCAGAAACAAAGGTAGGGTTCCAAAACGGTGGTCACTTTTTGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109349.9 |
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| CDS-3UTR CAA 90 bp | ATACCATATCCTGTTCCCAAAAGAACTTATAGAGGCAGGATAACTGGAAAGTGGTTTGGACTGCGCAGGTaGGAGGAGTCAGAGGACAAG | + |
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Preference number: 5 (lower is better) Translates to: IPYPVPKRTYRGRITGKWFGLRR*EESEDK Trigger: CTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAAA...CCACTTTCCAGTTATCCTGCCTCTATAAGTTCTTTTGGGAACAGGATATGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| CDS-3UTR CAA 90 bp | AGTAACTCTGTGAAAACAGGAAAGTACTTCATCTTACTCAGGACTCTATTCCCAATCAATAAACTCCACTaGCTCCAGTGTGTCCACATT | + |
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Preference number: 5 (lower is better) Translates to: SNSVKTGKYFILLRTLFPINKLH*LQCVHI Trigger: AATGTGGACACACTGGAGCAAGTGGAGTTTATTGAT...TGGGAATAGAGTCCTGAGTAAGATGAAGTACTTTCCTGTTTTCACAGAGTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069385.15 ENSMUST00000109349.9 |
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| CDS CCA 72 bp | TCAGACGTGGGTACCAGCAGGCTCAGCTCCTCTGGATaGTCATCCACTCCAGACATCTGGGGAGCTGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: SDVGTSRLSSSG*SSTPDIWGAGE Trigger: CTCGCCAGCTCCCCAGATGTCTGGAGTGGATGACCATCCAGAGGAGCTGAGCCTGCTGGTACCCACGTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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| CDS CCA 72 bp | CCTGTCAGACGTGGGTACCAGCAGGCTCAGCTCCTCTaGATGGTCATCCACTCCAGACATCTGGGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PVRRGYQQAQLL*MVIHSRHLGSW Trigger: CCAGCTCCCCAGATGTCTGGAGTGGATGACCATCCAGAGGAGCTGAGCCTGCTGGTACCCACGTCTGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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| CDS CAA 72 bp | CTCAAAGAACTTCTGCCTCTCCCGGAGCCGCAGCTGTaGGCGCTCCAGGGCTGCTCTCGGATTTGGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LKELLPLPEPQL*ALQGCSRIWVH Trigger: ATGGACCCAAATCCGAGAGCAGCCCTGGAGCGCCAACAGCTGCGGCTCCGGGAGAGGCAGAAGTTCTTTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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| CDS CCA 72 bp | CTCAGCTCCTCTGGATGGTCATCCACTCCAGACATCTaGGGAGCTGGCGAGGACTCCTCACAAGGCAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: LSSSGWSSTPDI*GAGEDSSQGKN Trigger: GTTCTTGCCTTGTGAGGAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGATGACCATCCAGAGGAGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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| CDS CAA 72 bp | GTGCCAAGGGAGTGTCTCCTCCCCCATCACTTGGATTaGGACTGCGCAGGTTGGAGGAGTCAGAGGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: VPRECLLPHHLD*DCAGWRSQRTR Trigger: CCTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAAATCCAAGTGATGGGGGAGGAGACACTCCCTTGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| CDS GCA 72 bp | TCTGTCTCTGGCTGTAAAATGTCCTCAAAGAACTTCTaGCTCTCCCGGAGCCGCAGCTGTTGGCGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SVSGCKMSSKNF*LSRSRSCWRSR Trigger: CCTGGAGCGCCAACAGCTGCGGCTCCGGGAGAGGCAGAAGTTCTTTGAGGACATTTTACAGCCAGAGACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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| CDS CCA 72 bp | CTCTGGATGGTCATCCACTCCAGACATCTGGGGAGCTaGCGAGGACTCCTCACAAGGCAAGAACACATCTGC | + |
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Preference number: 6 (lower is better) Translates to: LWMVIHSRHLGS*RGLLTRQEHIC Trigger: GCAGATGTGTTCTTGCCTTGTGAGGAGTCCTCGCCAGCTCCCCAGATGTCTGGAGTGGATGACCATCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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| CDS CCA 72 bp | TGCCAAGGGAGTGTCTCCTCCCCCATCACTTGGATTTaGACTGCGCAGGTTGGAGGAGTCAGAGGACAAGGA | + |
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Preference number: 6 (lower is better) Translates to: CQGSVSSPITWI*TAQVGGVRGQG Trigger: TCCTTGTCCTCTGACTCCTCCAACCTGCGCAGTCCAAATCCAAGTGATGGGGGAGGAGACACTCCCTTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000149287.8 |
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| CDS TCA 72 bp | GACTCCTCACAAGGCAAGAACACATCTGCTCCATCCTaGTCCGCAAGATCAATAAACTCCACTTGCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: DSSQGKNTSAPS*SARSINSTCSS Trigger: ACTGGAGCAAGTGGAGTTTATTGATCTTGCGGATCAGGATGGAGCAGATGTGTTCTTGCCTTGTGAGGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000017878.3 ENSMUST00000069385.15 ENSMUST00000109349.9 ENSMUST00000109350.9 ENSMUST00000143690.8 ENSMUST00000149287.8 |
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