Pregenerated sensors for DBIL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038057Ensembl transcript IDs: ENSMUST00000040806.5
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AACCCGTCCCCTACCAGTGGAGCCATGCTACTTCCTTGTGTCTGCCAAAATGCTGCCCCTTCAGCTGCTTaGGTGAAGCACAGGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: NPSPTSGAMLLPCVCQNAAPSAA*VKHRPF Trigger: AAATGGCCTGTGCTTCACTCAAGCAGCTGAAGGGGC...AGCATTTTGGCAGACACAAGGAAGTAGCATGGCTCCACTGGTAGGGGACGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS-3UTR CCA 90 bp | ACCCGTCCCCTACCAGTGGAGCCATGCTACTTCCTTGTGTCTGCCAAAATGCTCTTGCTCTCACATCTGTaGCAGGAGGGACAGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: TRPLPVEPCYFLVSAKMLLLSHL*QEGQGC Trigger: ACATCCCTGTCCCTCCTGCCACAGATGTGAGAGCAA...GAGCATTTTGGCAGACACAAGGAAGTAGCATGGCTCCACTGGTAGGGGACGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS-3UTR TCA 90 bp | AGGAATCTTAAACCCGTCCCCTACCAGTGGAGCCATGCTACTTCCTTGTGTCTGACCAGCAGTTTCTCCTaGTCACTCACAGGCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RNLKPVPYQWSHATSLCLTSSFS*SLTGPF Trigger: GAAGGGGCCTGTGAGTGATCAGGAGAAACTGCTGGT...CAGACACAAGGAAGTAGCATGGCTCCACTGGTAGGGGACGGGTTTAAGATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS-3UTR CCA 90 bp | AACCCGTCCCCTACCAGTGGAGCCATGCTACTTCCTTGTGTCTGCCAAAATGCTTACAGTCGCCCTGGGTaGCCTGTTTGTAAAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NPSPTSGAMLLPCVCQNAYSRPG*PVCKSC Trigger: ACAGCTTTTACAAACAGGCCACCCAGGGCGACTGTA...AGCATTTTGGCAGACACAAGGAAGTAGCATGGCTCCACTGGTAGGGGACGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS-3UTR TCA 90 bp | ATCTTAAACCCGTCCCCTACCAGTGGAGCCATGCTACTTCCTTGTGTCTGCCAACTTCAGCTGCTTGAGTaGAGCACAGGCCATTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILNPSPTSGAMLLPCVCQLQLLE*STGHFK Trigger: TTTGAAATGGCCTGTGCTTCACTCAAGCAGCTGAAG...TTGGCAGACACAAGGAAGTAGCATGGCTCCACTGGTAGGGGACGGGTTTAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS-3UTR CCA 90 bp | TCAGGAATCTTAAACCCGTCCCCTACCAGTGGAGCCATGCTACTTCCTTGTGTCTCCAGGCCTCATATTTaGCCTTTGCTCTCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGILNPSPTSGAMLLPCVSRPHI*PLLSHL Trigger: CAGATGTGAGAGCAAAGGCCAAATATGAGGCCTGGA...GACACAAGGAAGTAGCATGGCTCCACTGGTAGGGGACGGGTTTAAGATTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS-3UTR CCA 90 bp | TCAGGAATCTTAAACCCGTCCCCTACCAGTGGAGCCATGCTACTTCCTTGTGTCCAATGTAGATCCTCATaGCATCCATCTTGGACATCC | + |
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Preference number: 4 (lower is better) Translates to: SGILNPSPTSGAMLLPCVQCRSS*HPSWTS Trigger: GGATGTCCAAGATGGATGCCATGAGGATCTACATTG...GACACAAGGAAGTAGCATGGCTCCACTGGTAGGGGACGGGTTTAAGATTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS GCA 90 bp | CTTGGACATCCCTTTGTTTACCATCCAGGCCTCATATTTGGCCTTTaGTCTCACATCTGTGGCAGGAGGGACAGGGATGTTACAGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: LGHPFVYHPGLIFGL*SHICGRRDRDVTVA Trigger: GGCGACTGTAACATCCCTGTCCCTCCTGCCACAGATGTGAGAGCAAAGGCCAAATATGAGGCCTGGATGGTAAACAAAGGGATGTCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS-3UTR CAA 90 bp | TTTATTGGTGTTTCTGCTAACGCTGCTACCCTTTCAGTGTGTTTCAGCCATCAGCTCATGGCATCCATCTaGGACATCCCTTTGTTTACC | + |
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Preference number: 5 (lower is better) Translates to: FIGVSANAATLSVCFSHQLMASI*DIPLFT Trigger: GGTAAACAAAGGGATGTCCAAGATGGATGCCATGAG...CTGATGGCTGAAACACACTGAAAGGGTAGCAGCGTTAGCAGAAACACCAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS CAA 90 bp | TCTTGGACATCCCTTTGTTTACCATCCAGGCCTCATATTTGGCCTTaGCTCTCACATCTGTGGCAGGAGGGACAGGGATGTTACAGTCGC | + |
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Preference number: 6 (lower is better) Translates to: SWTSLCLPSRPHIWP*LSHLWQEGQGCYSR Trigger: GCGACTGTAACATCCCTGTCCCTCCTGCCACAGATGTGAGAGCAAAGGCCAAATATGAGGCCTGGATGGTAAACAAAGGGATGTCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS CCA 72 bp | TGGACATCCCTTTGTTTACCATCCAGGCCTCATATTTaGCCTTTGCTCTCACATCTGTGGCAGGAGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: WTSLCLPSRPHI*PLLSHLWQEGQ Trigger: CTGTCCCTCCTGCCACAGATGTGAGAGCAAAGGCCAAATATGAGGCCTGGATGGTAAACAAAGGGATGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS CAA 72 bp | TCCCTTTGTTTACCATCCAGGCCTCATATTTGGCCTTaGCTCTCACATCTGTGGCAGGAGGGACAGGGATGT | + |
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Preference number: 6 (lower is better) Translates to: SLCLPSRPHIWP*LSHLWQEGQGC Trigger: ACATCCCTGTCCCTCCTGCCACAGATGTGAGAGCAAAGGCCAAATATGAGGCCTGGATGGTAAACAAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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| CDS CAA 72 bp | TTGGACATCCCTTTGTTTACCATCCAGGCCTCATATTaGGCCTTTGCTCTCACATCTGTGGCAGGAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: LDIPLFTIQASY*AFALTSVAGGT Trigger: TGTCCCTCCTGCCACAGATGTGAGAGCAAAGGCCAAATATGAGGCCTGGATGGTAAACAAAGGGATGTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040806.5 |
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