Pregenerated sensors for DAZL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010592Ensembl transcript IDs: ENSMUST00000010736.9, ENSMUST00000233248.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTTGTTAACTGTTACTTGTCTACTTTATACCAGGGAGCAATCCTaGCAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: CLLTVTCLLYTREQS*QNRIKTAKDCGYKG Trigger: ACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTCAGGATTGCTCCCTGGTATAAAGTAGACAAGTAACAGTTAACAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTACCAGGGAGCAATCCTaGCAGAATAGGATTAAGACT | + |
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Preference number: 2 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLTREQS*QNRIKT Trigger: AGTCTTAATCCTATTCTGTCAGGATTGCTCCCTGGT...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR-3UTR CCA 90 bp | TACAAAGGTTCTCTGCTGTCACAATGCATAATGTCCAATGATCTCATGTCCATCTTAAGACCCACTGATTaGACTGTTGAGAATCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: YKGSLLSQCIMSNDLMSILRPTD*TVENLF Trigger: AAACAGATTCTCAACAGTCCAATCAGTGGGTCTTAA...GATGGACATGAGATCATTGGACATTATGCATTGTGACAGCAGAGAACCTTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTGACTGCAAAAGACTGTaGGTACAAAGGTTCTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLDCKRL*VQRFSA Trigger: AGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTC...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGAGTGGAATCCATGTTTaGAGGAAAGGACTAATACAA | + |
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Preference number: 2 (lower is better) Translates to: STCLFLPSLKYLTPTKQQSGIHV*RKGLIQ Trigger: TTGTATTAGTCCTTTCCTTCAAACATGGATTCCACT...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGCTAAGTAAGAGTAAGTaGAATCCATGTTTGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: STCLFLPSLKYLTPTKQQLSKSK*NPCLKE Trigger: TTCCTTCAAACATGGATTCCACTTACTCTTACTTAG...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTTTAAGACCCACTGATTaGACTGTTGAGAATCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLLRPTD*TVENLF Trigger: AAACAGATTCTCAACAGTCCAATCAGTGGGTCTTAA...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR TCA 72 bp | ACTGTTACTTGTCTACTTTATACCAGGGAGCAATCCTaGCAGAATAGGATTAAGACTGCAAAAGACTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: TVTCLLYTREQS*QNRIKTAKDCG Trigger: CCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTCAGGATTGCTCCCTGGTATAAAGTAGACAAGTAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR-3UTR CAA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGCTGTTCAGGTACCTGTaGAGAAGTGAAATTCTTATA | + |
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Preference number: 3 (lower is better) Translates to: STCLFLPSLKYLTPTKQQLFRYL*RSEILI Trigger: TATAAGAATTTCACTTCTCAACAGGTACCTGAACAG...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR-3UTR CAA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGCTTGTTAACTGTTACTaGTCTACTTTATACCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: STCLFLPSLKYLTPTKQQLVNCY*STLYQG Trigger: TCCCTGGTATAAAGTAGACAAGTAACAGTTAACAAG...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTCTGTTCAGGTACCTGTaGAGAAGTGAAATTCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLLFRYL*RSEILI Trigger: TATAAGAATTTCACTTCTCAACAGGTACCTGAACAG...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR CCA 72 bp | TGTGCCTCAGAATTTAGGTTATCATTCATAGTAAGTTaGATATTTAGTCACAGAATGGTACATGTAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: CASEFRLSFIVS*IFSHRMVHVRT Trigger: TGTCCTTACATGTACCATTCTGTGACTAAATATCCAACTTACTATGAATGATAACCTAAATTCTGAGGCACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR GCA 90 bp | GACAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGTTCTCTGCTGTTCCACAGACTTCTTTTaGGGGCCATTTCCAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: DRIGLRLQKTVGTKVLCCSTDFF*GPFPEA Trigger: AGCTTCTGGAAATGGCCCGCAAAAGAAGTCTGTGGA...ACAGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | TACAAAGGTTCTCTGCTGTCACAATGCATAATGTCCAATGATCTCATGTCCATCCTACTCCAAACACTCTaGAACTGTGGTGGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: YKGSLLSQCIMSNDLMSILLQTL*NCGGGG Trigger: TCCTCCTCCACCACAGTTCCAGAGTGTTTGGAGTAG...GATGGACATGAGATCATTGGACATTATGCATTGTGACAGCAGAGAACCTTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | TACTTTATACCAGGGAGCAATCCTGACAGAATAGGATTAAGACTGCAAAAGACTGCTGGAGCAGCATCATaGACTGAACATTCATTGGGC | + |
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Preference number: 4 (lower is better) Translates to: YFIPGSNPDRIGLRLQKTAGAAS*TEHSLG Trigger: GCCCAATGAATGTTCAGTTCATGATGCTGCTCCAGC...AGTCTTTTGCAGTCTTAATCCTATTCTGTCAGGATTGCTCCCTGGTATAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTATGAAGACTGAGTGCTaGCCTCCCTGGAGACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLMKTEC*PPWRQL Trigger: CAGCTGTCTCCAGGGAGGCCAGCACTCAGTCTTCAT...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010736.9 |
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| CDS-3UTR CCA 90 bp | GACAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGTTCTCTGCTGTAGGATTCATCATGGTTaGAGGCTGCATGTAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DRIGLRLQKTVGTKVLCCRIHHG*RLHVSL Trigger: GAGACTTACATGCAGCCTCCAACCATGATGAATCCT...ACAGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR GCA 90 bp | TACTTTATACCAGGGAGCAATCCTGACAGAATAGGATTAAGACTGCAAAAGACTTCCACAGACTTCTTTTaGGGGCCATTTCCAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: YFIPGSNPDRIGLRLQKTSTDFF*GPFPEA Trigger: AGCTTCTGGAAATGGCCCGCAAAAGAAGTCTGTGGA...AGTCTTTTGCAGTCTTAATCCTATTCTGTCAGGATTGCTCCCTGGTATAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | GACAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGTTCTCTGCTGTCATATCCTTGACTTGTaGTTGCTGATGAAGACTGAG | + |
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Preference number: 4 (lower is better) Translates to: DRIGLRLQKTVGTKVLCCHILDL*LLMKTE Trigger: CTCAGTCTTCATCAGCAACCACAAGTCAAGGATATG...ACAGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010736.9 |
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| CDS-3UTR CCA 90 bp | GACAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGTTCTCTGCTGTGTAAGTCTCAGCATTTaGACTACTCCAAACACTCTG | + |
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Preference number: 4 (lower is better) Translates to: DRIGLRLQKTVGTKVLCCVSLSI*TTPNTL Trigger: CAGAGTGTTTGGAGTAGTCCAAATGCTGAGACTTAC...ACAGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGTGGCAAAGAAACTCCTaGTTTCGGTTTCATCCATCC | + |
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Preference number: 4 (lower is better) Translates to: STCLFLPSLKYLTPTKQQWQRNS*FRFHPS Trigger: GGATGGATGAAACCGAAATCAGGAGTTTCTTTGCCA...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | TACTTTATACCAGGGAGCAATCCTGACAGAATAGGATTAAGACTGCAAAAGACTTGGCAAAGAAACTCCTaGTTTCGGTTTCATCCATCC | + |
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Preference number: 4 (lower is better) Translates to: YFIPGSNPDRIGLRLQKTWQRNS*FRFHPS Trigger: GGATGGATGAAACCGAAATCAGGAGTTTCTTTGCCA...AGTCTTTTGCAGTCTTAATCCTATTCTGTCAGGATTGCTCCCTGGTATAAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | GACAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGTTCTCTGCTGTAGCAGCATCATGAACTaGACATTCATTGGGCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: DRIGLRLQKTVGTKVLCCSSIMN*TFIGQN Trigger: ATTTTGCCCAATGAATGTTCAGTTCATGATGCTGCT...ACAGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTGCTGGAGCAGCATCATaGACTGAACATTCATTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLAGAAS*TEHSLG Trigger: GCCCAATGAATGTTCAGTTCATGATGCTGCTCCAGC...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR GCA 90 bp | GACAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGTTCTCTGCTGTTGGATAAGGAGGATATaGCTGAACATACTGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: DRIGLRLQKTVGTKVLCCWIRRI*LNILSD Trigger: ATCACTCAGTATGTTCAGGCATATCCTCCTTATCCA...ACAGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTCTACTCCAAACACTCTaGAACTGTGGTGGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLLLQTL*NCGGGG Trigger: TCCTCCTCCACCACAGTTCCAGAGTGTTTGGAGTAG...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | TACAAAGGTTCTCTGCTGTCACAATGCATAATGTCCAATGATCTCATGTCCATCGTAAGTCTCAGCATTTaGACTACTCCAAACACTCTG | + |
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Preference number: 4 (lower is better) Translates to: YKGSLLSQCIMSNDLMSIVSLSI*TTPNTL Trigger: CAGAGTGTTTGGAGTAGTCCAAATGCTGAGACTTAC...GATGGACATGAGATCATTGGACATTATGCATTGTGACAGCAGAGAACCTTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGAGGATTCATCATGGTTaGAGGCTGCATGTAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: STCLFLPSLKYLTPTKQQRIHHG*RLHVSL Trigger: GAGACTTACATGCAGCCTCCAACCATGATGAATCCT...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGGGCAAAACATATCCTTaGCTTGTGGTTGCTGATGAA | + |
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Preference number: 4 (lower is better) Translates to: STCLFLPSLKYLTPTKQQGKTYP*LVVADE Trigger: TTCATCAGCAACCACAAGTCAAGGATATGTTTTGCC...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010736.9 |
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| CDS-3UTR TCA 90 bp | TACAAAGGTTCTCTGCTGTCACAATGCATAATGTCCAATGATCTCATGTCCATCAGCAGCATCATGAACTaGACATTCATTGGGCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: YKGSLLSQCIMSNDLMSISSIMN*TFIGQN Trigger: ATTTTGCCCAATGAATGTTCAGTTCATGATGCTGCT...GATGGACATGAGATCATTGGACATTATGCATTGTGACAGCAGAGAACCTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGCTGCCCGACTTCTTCTaGAGTGATGTACTCTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: STCLFLPSLKYLTPTKQQLPDFF*SDVLFY Trigger: ATAAAAGAGTACATCACTTCAGAAGAAGTCGGGCAG...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR GCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGATCAGATTTAAGCACTaGCCGACTTCTTCTGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: STCLFLPSLKYLTPTKQQIRFKH*PTSSEV Trigger: CACTTCAGAAGAAGTCGGGCAGTGCTTAAATCTGAT...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | TACAAAGGTTCTCTGCTGTCACAATGCATAATGTCCAATGATCTCATGTCCATCGAACTGAACATTCATTaGGCAAAATATCAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: YKGSLLSQCIMSNDLMSIELNIH*AKYQLL Trigger: CAGGAGCTGATATTTTGCCCAATGAATGTTCAGTTC...GATGGACATGAGATCATTGGACATTATGCATTGTGACAGCAGAGAACCTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | TACTTTATACCAGGGAGCAATCCTGACAGAATAGGATTAAGACTGCAAAAGACTCTTCACTTCTTTTACTaGGCCATATCTGGCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: YFIPGSNPDRIGLRLQKTLHFFY*AISGKE Trigger: TTCTTTGCCAGATATGGCTCAGTAAAAGAAGTGAAG...AGTCTTTTGCAGTCTTAATCCTATTCTGTCAGGATTGCTCCCTGGTATAAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | TACAAAGGTTCTCTGCTGTCACAATGCATAATGTCCAATGATCTCATGTCCATCCACGTCATTATAAAATaGGACAAATCCATAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: YKGSLLSQCIMSNDLMSIHVIIK*DKSIAL Trigger: AAGGGCTATGGATTTGTCTCATTTTATAATGACGTG...GATGGACATGAGATCATTGGACATTATGCATTGTGACAGCAGAGAACCTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGCGACTTCTTCTGAAGTaGTGTACTCTTTTATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: STCLFLPSLKYLTPTKQQRLLLK*CTLLSL Trigger: CAAGGATAAAAGAGTACATCACTTCAGAAGAAGTCG...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR GCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGTGGATAAGGAGGATATaGCTGAACATACTGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: STCLFLPSLKYLTPTKQQWIRRI*LNILSD Trigger: ATCACTCAGTATGTTCAGGCATATCCTCCTTATCCA...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | TACAAAGGTTCTCTGCTGTCACAATGCATAATGTCCAATGATCTCATGTCCATCAAAAATCAAAGGACGTaGCTGCACATGATAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: YKGSLLSQCIMSNDLMSIKNQRT*LHMIST Trigger: TGTACTTATCATGTGCAGCCACGTCCTTTGATTTTT...GATGGACATGAGATCATTGGACATTATGCATTGTGACAGCAGAGAACCTTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | TACTTTATACCAGGGAGCAATCCTGACAGAATAGGATTAAGACTGCAAAAGACTGAACTGAACATTCATTaGGCAAAATATCAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: YFIPGSNPDRIGLRLQKTELNIH*AKYQLL Trigger: CAGGAGCTGATATTTTGCCCAATGAATGTTCAGTTC...AGTCTTTTGCAGTCTTAATCCTATTCTGTCAGGATTGCTCCCTGGTATAAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGCATGATTTTGCCTTCTaGCAAAACATATCCTTGACT | + |
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Preference number: 4 (lower is better) Translates to: STCLFLPSLKYLTPTKQQHDFAF*QNISLT Trigger: AGTCAAGGATATGTTTTGCCAGAAGGCAAAATCATG...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010736.9 |
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| CDS-3UTR CCA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGAAAAATCAAAGGACGTaGCTGCACATGATAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: STCLFLPSLKYLTPTKQQKNQRT*LHMIST Trigger: TGTACTTATCATGTGCAGCCACGTCCTTTGATTTTT...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| 3UTR CAA 72 bp | CTCAGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTaGACTCCAACAAAACAGCAGACAAAAGTTTATTCC | + |
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Preference number: 4 (lower is better) Translates to: LSTCLFLPSLKY*TPTKQQTKVYS Trigger: GGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTCTTCACTTCTTTTACTaGGCCATATCTGGCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLLHFFY*AISGKE Trigger: TTCTTTGCCAGATATGGCTCAGTAAAAGAAGTGAAG...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTCACGTCATTATAAAATaGGACAAATCCATAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLHVIIK*DKSIAL Trigger: AAGGGCTATGGATTTGTCTCATTTTATAATGACGTG...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CAA 90 bp | TACTTTATACCAGGGAGCAATCCTGACAGAATAGGATTAAGACTGCAAAAGACTGTCCACAGACTTCTTTaGCGGGCCATTTCCAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: YFIPGSNPDRIGLRLQKTVHRLL*RAISRS Trigger: GCTTCTGGAAATGGCCCGCAAAAGAAGTCTGTGGAC...AGTCTTTTGCAGTCTTAATCCTATTCTGTCAGGATTGCTCCCTGGTATAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CAA 90 bp | GACAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGTTCTCTGCTGTTGTAAGTCTCAGCATTaGGACTACTCCAAACACTCT | + |
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Preference number: 5 (lower is better) Translates to: DRIGLRLQKTVGTKVLCCCKSQH*DYSKHS Trigger: AGAGTGTTTGGAGTAGTCCAAATGCTGAGACTTACA...ACAGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CAA 90 bp | GACAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGTTCTCTGCTGTGTGTTTGGCATGATTTaGCCTTCTGGCAAAACATAT | + |
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Preference number: 5 (lower is better) Translates to: DRIGLRLQKTVGTKVLCCVFGMI*PSGKTY Trigger: ATATGTTTTGCCAGAAGGCAAAATCATGCCAAACAC...ACAGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010736.9 |
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| CDS-3UTR CAA 90 bp | AGTACTTGTCTCTTTCTCCCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGTGTAAGTCTCAGCATTaGGACTACTCCAAACACTCT | + |
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Preference number: 5 (lower is better) Translates to: STCLFLPSLKYLTPTKQQCKSQH*DYSKHS Trigger: AGAGTGTTTGGAGTAGTCCAAATGCTGAGACTTACA...CTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGGGAGAAAGAGACAAGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CAA 90 bp | GACAGAATAGGATTAAGACTGCAAAAGACTGTGGGTACAAAGGTTCTCTGCTGTCTTGAAGTAGTCATCTaGAGTAACAAGAGAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: DRIGLRLQKTVGTKVLCCLEVVI*SNKRVS Trigger: AGAAACTCTCTTGTTACTCAAGATGACTACTTCAAG...ACAGCAGAGAACCTTTGTACCCACAGTCTTTTGCAGTCTTAATCCTATTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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| CDS-3UTR CAA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTAAACATATCCTTGACTaGTGGTTGCTGATGAAGACT | + |
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Preference number: 5 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLKHILD*WLLMKT Trigger: AGTCTTCATCAGCAACCACAAGTCAAGGATATGTTT...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010736.9 |
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| CDS-3UTR CAA 90 bp | CCTTCTCTTAAATACTTGACTCCAACAAAACAGCAGACAAAAGTTTATTCCCTTCTTGAAGTAGTCATCTaGAGTAACAAGAGAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PSLKYLTPTKQQTKVYSLLEVVI*SNKRVS Trigger: AGAAACTCTCTTGTTACTCAAGATGACTACTTCAAG...AAGGGAATAAACTTTTGTCTGCTGTTTTGTTGGAGTCAAGTATTTAAGAGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010736.9 ENSMUST00000233248.2 |
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