Pregenerated sensors for DAZAP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000346

Ensembl transcript IDs: ENSMUST00000000356.10

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	GGGACAGGTGCAGGGAGACAAGGGGCTGAGTCTGGCTTTCGGTCCTaGACCACTGATTCTATGGATAGTGATGGGAGGGGGTGGAGGAGC	+
Preference number: 1 (lower is better) Translates to: GTGAGRQGAESGFRS*TTDSMDSDGRGWRS Trigger: GCTCCTCCACCCCCTCCCATCACTATCCATAGAATCAGTGGTGCAGGACCGAAAGCCAGACTCAGCCCCTTGTCTCCCTGCACCTGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
3UTR GCA 90 bp	CATCTTCTCCCCTGCCTGTCATCTTTAAATTTTCCTAGGACAGTTTaGACTGAGAACTGTTGTTTAAGTTCAGGTTTCTGGCACCACAGC	+
Preference number: 1 (lower is better) Translates to: HLLPCLSSLNFPRTV*TENCCLSSGFWHHS Trigger: GCTGTGGTGCCAGAAACCTGAACTTAAACAACAGTTCTCAGTGCAAACTGTCCTAGGAAAATTTAAAGATGACAGGCAGGGGAGAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
3UTR-3UTR GCA 90 bp	CCTAGGACAGTTTGCACTGAGAACTGTTGTTTAAGTTCAGGTTTCTGGCACCACTCTGGCTTTCGGTCCTaGACCACTGATTCTATGGAT	+
Preference number: 2 (lower is better) Translates to: PRTVCTENCCLSSGFWHHSGFRS*TTDSMD Trigger: ATCCATAGAATCAGTGGTGCAGGACCGAAAGCCAGA...GTGGTGCCAGAAACCTGAACTTAAACAACAGTTCTCAGTGCAAACTGTCCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
3UTR-3UTR CCA 90 bp	ACTCCCTTAGACTTTAAAGCCAAGCTTTTGATATGCATCTTCTCCCCTGCCTGTACCCTTCACCTTGCCTaGAGATATACAAAACCTGAA	+
Preference number: 2 (lower is better) Translates to: TPLDFKAKLLICIFSPACTLHLA*RYTKPE Trigger: TTCAGGTTTTGTATATCTCCAGGCAAGGTGAAGGGT...ACAGGCAGGGGAGAAGATGCATATCAAAAGCTTGGCTTTAAAGTCTAAGGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
3UTR-3UTR TCA 90 bp	ACTCCCTTAGACTTTAAAGCCAAGCTTTTGATATGCATCTTCTCCCCTGCCTGTGAGATATACAAAACCTaGAGAAATGGAGTCTGTGCT	+
Preference number: 2 (lower is better) Translates to: TPLDFKAKLLICIFSPACEIYKT*RNGVCA Trigger: AGCACAGACTCCATTTCTTCAGGTTTTGTATATCTC...ACAGGCAGGGGAGAAGATGCATATCAAAAGCTTGGCTTTAAAGTCTAAGGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
3UTR CCA 72 bp	TTCACCTTGCCTGGAGATATACAAAACCTGAAGAAATaGAGTCTGTGCTCAGGTCACACAGGGGGCTTCAGA	+
Preference number: 3 (lower is better) Translates to: FTLPGDIQNLKK*SLCSGHTGGFR Trigger: TCTGAAGCCCCCTGTGTGACCTGAGCACAGACTCCATTTCTTCAGGTTTTGTATATCTCCAGGCAAGGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
3UTR CCA 72 bp	TTGTTTAAGTTCAGGTTTCTGGCACCACAGCTAGTCTaGGTTCATGGTGATGCAGAGATGGTTTATGAGGCG	+
Preference number: 3 (lower is better) Translates to: LFKFRFLAPQLV*VHGDAEMVYEA Trigger: CGCCTCATAAACCATCTCTGCATCACCATGAACCCAGACTAGCTGTGGTGCCAGAAACCTGAACTTAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
CDS-3UTR TCA 90 bp	GGATACCTCCTTACCTCAGAATGCTTTAGGGAGGGGCTGCTACCCTTACATGGTCATCTGAGCCACCCATaGAGAAGTTTCCCTTGCGCT	+
Preference number: 4 (lower is better) Translates to: GYLLTSECFREGLLPLHGHLSHP*RSFPCA Trigger: AGCGCAAGGGAAACTTCTTCATGGGTGGCTCAGATG...ACCATGTAAGGGTAGCAGCCCCTCCCTAAAGCATTCTGAGGTAAGGAGGTATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
CDS-3UTR TCA 90 bp	GGATACCTCCTTACCTCAGAATGCTTTAGGGAGGGGCTGCTACCCTTACATGGTTGGACGATAGAGCTCTaGATATGCAGGTGGAGCATC	+
Preference number: 4 (lower is better) Translates to: GYLLTSECFREGLLPLHGWTIEL*ICRWSI Trigger: GATGCTCCACCTGCATATTCAGAGCTCTATCGTCCA...ACCATGTAAGGGTAGCAGCCCCTCCCTAAAGCATTCTGAGGTAAGGAGGTATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
CDS-3UTR GCA 90 bp	CCTAGGACAGTTTGCACTGAGAACTGTTGTTTAAGTTCAGGTTTCTGGCACCACGTGGAGGAGGAATGTTaGCAGCAGTGGCACCAGCTC	+
Preference number: 4 (lower is better) Translates to: PRTVCTENCCLSSGFWHHVEEEC*QQWHQL Trigger: GAGCTGGTGCCACTGCTGGCAACATTCCTCCTCCAC...GTGGTGCCAGAAACCTGAACTTAAACAACAGTTCTCAGTGCAAACTGTCCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
CDS-3UTR CCA 90 bp	CCTAGGACAGTTTGCACTGAGAACTGTTGTTTAAGTTCAGGTTTCTGGCACCACAGGGCATCCAGGAGGTaGAGGAGGAATGTTGCCAGC	+
Preference number: 4 (lower is better) Translates to: PRTVCTENCCLSSGFWHHRASRR*RRNVAS Trigger: GCTGGCAACATTCCTCCTCCACCTCCTGGATGCCCT...GTGGTGCCAGAAACCTGAACTTAAACAACAGTTCTCAGTGCAAACTGTCCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
3UTR CAA 72 bp	TGGTTTATGAGGCGGGTCCGAAGGGTACCCTTCACCTaGCCTGGAGATATACAAAACCTGAAGAAATGGAGT	+
Preference number: 4 (lower is better) Translates to: WFMRRVRRVPFT*PGDIQNLKKWS Trigger: ACTCCATTTCTTCAGGTTTTGTATATCTCCAGGCAAGGTGAAGGGTACCCTTCGGACCCGCCTCATAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
CDS-3UTR TCA 90 bp	ACTCCCTTAGACTTTAAAGCCAAGCTTTTGATATGCATCTTCTCCCCTGCCTGTAAGTTTCCCTTGCGCTaGGTTACAAGGACGTTGGCT	+
Preference number: 4 (lower is better) Translates to: TPLDFKAKLLICIFSPACKFPLR*VTRTLA Trigger: AGCCAACGTCCTTGTAACTCAGCGCAAGGGAAACTT...ACAGGCAGGGGAGAAGATGCATATCAAAAGCTTGGCTTTAAAGTCTAAGGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000356.10
CDS-3UTR CAA 90 bp	GGATACCTCCTTACCTCAGAATGCTTTAGGGAGGGGCTGCTACCCTTACATGGTGGTGGAGGAGGAATGTaGCCAGCAGTGGCACCAGCT	+
Preference number: 5 (lower is better) Translates to: GYLLTSECFREGLLPLHGGGGGM*PAVAPA Trigger: AGCTGGTGCCACTGCTGGCAACATTCCTCCTCCACC...ACCATGTAAGGGTAGCAGCCCCTCCCTAAAGCATTCTGAGGTAAGGAGGTATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000356.10