Pregenerated sensors for DAZAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069565Ensembl transcript IDs: ENSMUST00000092305.6, ENSMUST00000105361.10, ENSMUST00000105362.8, ENSMUST00000156935.8
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCAATGGGAACCTGAGCCCTACTGAGGGGCCTCCAGCAAGGCCTTaGCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTT | + |
|
Preference number: 1 (lower is better) Translates to: VNGNLSPTEGPPARP*LPHLCGWGPGHPRL Trigger: AAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR GCA 90 bp | GGCCACCCGAGACTTCAGCACTGCCACCTGTGCCAGGGGCCCTGTTaGACCTGCAGCCACACAAGCCGCTCAAAGCAAGGAATGAACAAA | + |
|
Preference number: 1 (lower is better) Translates to: GHPRLQHCHLCQGPC*TCSHTSRSKQGMNK Trigger: TTTGTTCATTCCTTGCTTTGAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTGAAGTCTCGGGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR TCA 90 bp | TTATTCAAACCGGGTCAAACTGGTCAATGGGAACCTGAGCCCTACTaGGGGGCCTCCAGCAAGGCCTTGCCTGCCACACCTGTGTGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: LFKPGQTGQWEPEPY*GASSKALPATPVWV Trigger: CACCCACACAGGTGTGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGACCAGTTTGACCCGGTTTGAATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR CAA 90 bp | AGGCCACCCGAGACTTCAGCACTGCCACCTGTGCCAGGGGCCCTGTaGCACCTGCAGCCACACAAGCCGCTCAAAGCAAGGAATGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: RPPETSALPPVPGAL*HLQPHKPLKARNEQ Trigger: TTGTTCATTCCTTGCTTTGAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTGAAGTCTCGGGTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTTTAAACCCTGTTGTTaGACCAGTGACGTGTTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: SKALPATPVWVGPRPPETFKPCC*TSDVFL Trigger: TAAAAACACGTCACTGGTTCAACAACAGGGTTTAAA...AGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACCAAATGCACGCAGTAGTCTCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGTTTAAACCCTGTTGTTaGACCAGTGACGTGTTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: KPNARSSLCPHPSPRRREFKPCC*TSDVFL Trigger: TAAAAACACGTCACTGGTTCAACAACAGGGTTTAAA...CTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGAGACTACTGCGTGCATTTGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR GCA 72 bp | TGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGCACTaGCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CGWGPGHPRLQH*HLCQGPCCTCS Trigger: GCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTGAAGTCTCGGGTGGCCTGGGCCCCACCCACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR CCA 72 bp | GGGGCCTCCAGCAAGGCCTTGCCTGCCACACCTGTGTaGGTGGGGCCCAGGCCACCCGAGACTTCAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GASSKALPATPV*VGPRPPETSAL Trigger: CAGTGCTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCTGGAGGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR CCA 72 bp | CCTCCAGCAAGGCCTTGCCTGCCACACCTGTGTGGGTaGGGCCCAGGCCACCCGAGACTTCAGCACTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PPARPCLPHLCG*GPGHPRLQHCH Trigger: GTGGCAGTGCTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCTGGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR TCA 72 bp | CCGGGTCAAACTGGTCAATGGGAACCTGAGCCCTACTaGGGGGCCTCCAGCAAGGCCTTGCCTGCCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: PGQTGQWEPEPY*GASSKALPATP Trigger: AGGTGTGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGACCAGTTTGACCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| 3UTR GCA 72 bp | CAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTaGAGCCACACAAGCCGCTCAAAGCAAGGAATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QHCHLCQGPCCT*SHTSRSKQGMN Trigger: GTTCATTCCTTGCTTTGAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACCCGAACCCTGCTACGCGGCTGCCCCACTaGCTGGCTCCTGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PARAGGSQGSRFPHPNPATRLPH*LAPGCP Trigger: AGGACAGCCAGGAGCCAGCCAGTGGGGCAGCCGCGT...AGCAGGGTTCGGGTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACGGGTGTGTGGTCTGCTaGCCAGCACTGTCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SARTPARAGGSQGSRFPHGCVVC*PALSPH Trigger: GTGTGGGGACAGTGCTGGCCAGCAGACCACACACCC...GTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACCCGAACCCTGCTGGGCCGTGTTCGCTCTaGCTGCATCCCCCGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PARAGGSQGSRFPHPNPAGPCSL*LHPPRC Trigger: ACACCTCGGGGGATGCAGCCAGAGCGAACACGGCCC...AGCAGGGTTCGGGTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACCCGAACCCTGCTATACAATGTAGGAGGTaGAGGGTGGGGGCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PARAGGSQGSRFPHPNPAIQCRR*RVGAGA Trigger: CGCCCCCGCCCCCACCCTTCACCTCCTACATTGTAT...AGCAGGGTTCGGGTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACCCGAACCCTGCTATGTCTGGGGCAGCCTaGGACGGAGGTGGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PARAGGSQGSRFPHPNPAMSGAA*DGGGGK Trigger: CTTCCCACCACCTCCGTCTCAGGCTGCCCCAGACAT...AGCAGGGTTCGGGTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGGGGCGGGGGCTGGCCTaGCCAGCCGTTGGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RPCLPHLCGWGPGHPRLQGRGLA*PAVGCT Trigger: AGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCC...CTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCGGGCGGGGGCTGGCCTaGCCAGCCGTTGGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QHCHLCQGPCCTCSHTSRGRGLA*PAVGCT Trigger: AGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCC...GCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAATGCACGCAGTAGTCTCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGAGCCGTTGGCTGCACTaGGCGCCACGCGGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPNARSSLCPHPSPRRRESRWLH*APRGCP Trigger: GGGGCAGCCGCGTGGCGCCCAGTGCAGCCAACGGCT...CTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGAGACTACTGCGTGCATTTGGTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCCACGTGGGCGGGGGCTaGCCTGCCCAGCCGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHCHLCQGPCCTCSHTSRHVGGG*PAQPLA Trigger: AGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTG...GCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACGCCAAAACTGAACTGTaGTGGGGCGCCATAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SARTPARAGGSQGSRFPHAKTEL*WGAIAL Trigger: CAGGGCTATGGCGCCCCACCACAGTTCAGTTTTGGC...GTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGCAGCGGGGCAGCCCCTaGGGTGGCAGGTGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPCLPHLCGWGPGHPRLQQRGSP*GGRWRR Trigger: CCTCCTCCACCTGCCACCCCAGGGGCTGCCCCGCTG...CTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAGACTTCAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACGTGGGCGGGGGCTaGCCTGCCCAGCCGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PETSALPPVPGALLHLQPHVGGG*PAQPLA Trigger: AGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTG...TGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTGAAGTCTCGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACCCGAACCCTGCTGTAGAGTCTCTTGAGTaGTACTCCAGTCCAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PARAGGSQGSRFPHPNPAVESLE*YSSPGR Trigger: GCGGCCTGGACTGGAGTACCACTCAAGAGACTCTAC...AGCAGGGTTCGGGTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAATGCACGCAGTAGTCTCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGACGCGGCTGCCCCACTaGCTGGCTCCTGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPNARSSLCPHPSPRRRETRLPH*LAPGCP Trigger: AGGACAGCCAGGAGCCAGCCAGTGGGGCAGCCGCGT...CTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGAGACTACTGCGTGCATTTGGTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGCACTGCGGCGCCATAGCCCTGTaGGAAGCCCTGTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPHLCGWGPGHPRLQHCGAIAL*EALWWG Trigger: CCCCCACCACAGGGCTTCCCACAGGGCTATGGCGCC...GCAGTGCTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCGGCGCCATAGCCCTGTaGGAAGCCCTGTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPPVPGALLHLQPHKPLGAIAL*EALWWG Trigger: CCCCCACCACAGGGCTTCCCACAGGGCTATGGCGCC...GAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCGGGCCATATCCTTGTTaGCACGTGGGCGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QHCHLCQGPCCTCSHTSRGPYPC*HVGGGW Trigger: CCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCC...GCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAAATGCACGCAGTAGTCTCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGGGGCCGTGTTCGCTCTaGCTGCATCCCCCGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPNARSSLCPHPSPRRREGPCSL*LHPPRC Trigger: ACACCTCGGGGGATGCAGCCAGAGCGAACACGGCCC...CTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGAGACTACTGCGTGCATTTGGTTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACTGCATGTTGACAGCCTaGTCCACTGATTGTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SARTPARAGGSQGSRFPHCMLTA*STDCSS Trigger: GGACGAACAATCAGTGGACCAGGCTGTCAACATGCA...GTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACATTCTTGCTGTCCCGTaGTTCAGCCCGTTTAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SARTPARAGGSQGSRFPHILAVP*FSPFNL Trigger: GAGGTTAAACGGGCTGAACCACGGGACAGCAAGAAT...GTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAGACTTCAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCAATCCTTGTTGCCACGTaGGCGGGGGCTGGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PETSALPPVPGALLHLQPILVAT*AGAGLP Trigger: GGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGAT...TGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTGAAGTCTCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAGACTTCAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCATGGGAAGCCCTGTGGTaGGGGGAAGCCTCCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PETSALPPVPGALLHLQPWEALW*GEASRR Trigger: CCGCCTGGAGGCTTCCCCCCACCACAGGGCTTCCCA...TGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTGAAGTCTCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACCTCCTGGGTCCTTTCTaGCAGCCTTCCTTGGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QQGLACHTCVGGAQATRDLLGPF*QPSLGR Trigger: ACGGCCCAAGGAAGGCTGGCAGAAAGGACCCAGGAG...GTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092305.6 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACCCGAACCCTGCTTCTTGTTGGATTTGCTaGTGTCGCTCCTGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PARAGGSQGSRFPHPNPASCWIC*CRSWVL Trigger: AAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGA...AGCAGGGTTCGGGTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCTGGGCGCCACGCGGCTaGCCCACTGGCTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPSVIVTSSPVPNPACPAWAPRG*PTGWLL Trigger: CAGGAGCCAGCCAGTGGGGCAGCCGCGTGGCGCCCA...GGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCAAAGTGGGAAGCCCTGTGGTaGGGGGAAGCCTCCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CHLCQGPCCTCSHTSRSKWEALW*GEASRR Trigger: CCGCCTGGAGGCTTCCCCCCACCACAGGGCTTCCCA...CTTTGAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGCAAACTGATCAGGGGGTaGGGGAGGAGGACCGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLACHTCVGGAQATRDFSKLIRG*GRRTVA Trigger: GGCTACGGTCCTCCTCCCCCACCCCCTGATCAGTTT...GCTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGCACTGCGCATCCCCCGAGGTGTaGACGGCTTCGGGTCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: CLPHLCGWGPGHPRLQHCASPEV*TASGRY Trigger: ATATCGACCCGAAGCCGTGCACACCTCGGGGGATGC...GCAGTGCTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAAATGCACGCAGTAGTCTCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGGCATCCCCCGAGGTGTaGACGGCTTCGGGTCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: KPNARSSLCPHPSPRRREASPEV*TASGRY Trigger: ATATCGACCCGAAGCCGTGCACACCTCGGGGGATGC...CTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGAGACTACTGCGTGCATTTGGTTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATCACGTGGGCGGGGGCTaGCCTGCCCAGCCGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ECDCHKFTSPESCLPRRHHVGGG*PAQPLA Trigger: AGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTG...ATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGGCCATAGCCACCAATaGCCTGTCCTGCTGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KALPATPVWVGPRPPETSGHSHQ*PVLLAP Trigger: GGGTGCCAGCAGGACAGGCCATTGGTGGCTATGGCC...TGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGCAGCGGGGCAGCCCCTaGGGTGGCAGGTGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTSSPVPNPACPAAMQRGSP*GGRWRR Trigger: CCTCCTCCACCTGCCACCCCAGGGGCTGCCCCGCTG...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGGGTCCGAGAAGCCCTaGCCGAAGCCACTCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KALPATPVWVGPRPPETSGSEKP*PKPLKS Trigger: GGACTTGAGTGGCTTCGGCCAGGGCTTCTCGGACCC...TGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCAAAGGGCCATAGCCACCAATaGCCTGTCCTGCTGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: CHLCQGPCCTCSHTSRSKGHSHQ*PVLLAP Trigger: GGGTGCCAGCAGGACAGGCCATTGGTGGCTATGGCC...CTTTGAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATAGGGCGGCTGCTGGCTaGGGTCCGAGAAGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ECDCHKFTSPESCLPRRHRAAAG*GPRSPG Trigger: GCCAGGGCTTCTCGGACCCCAGCCAGCAGCCGCCCT...ATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTTGCTGCTGTCGCTCCTaGGTCCTTTCCAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARPCLPHLCGWGPGHPRLCCCRS*VLSSLP Trigger: AGGAAGGCTGGAAAGGACCCAGGAGCGACAGCAGCA...AAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | GTCAATGGGAACCTGAGCCCTACTGAGGGGCCTCCAGCAAGGCCTTGCCTGCCAATACAATGTAGGAGGTaGAGGGTGGGGGCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VNGNLSPTEGPPARPCLPIQCRR*RVGAGA Trigger: CGCCCCCGCCCCCACCCTTCACCTCCTACATTGTAT...TGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GTCAATGGGAACCTGAGCCCTACTGAGGGGCCTCCAGCAAGGCCTTGCCTGCCAGGGTGTGTGGTCTGCTaGCCAGCACTGTCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VNGNLSPTEGPPARPCLPGCVVC*PALSPH Trigger: GTGTGGGGACAGTGCTGGCCAGCAGACCACACACCC...TGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCATCCTTGTTGCCACGTaGGCGGGGGCTGGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CPECDCHKFTSPESCLPRILVAT*AGAGLP Trigger: GGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGAT...GCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGCCCCTGGGCCATAGCCACCAATaGCCTGTCCTGCTGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: IVTSSPVPNPACPAAMPLGHSHQ*PVLLAP Trigger: GGGTGCCAGCAGGACAGGCCATTGGTGGCTATGGCC...CAGGGGCATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATTGGGAAGCCCTGTGGTaGGGGGAAGCCTCCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ECDCHKFTSPESCLPRRHWEALW*GEASRR Trigger: CCGCCTGGAGGCTTCCCCCCACCACAGGGCTTCCCA...ATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGGGCGCCATAGCCCTGTaGGAAGCCCTGTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTSSPVPNPACPAAMGAIAL*EALWWG Trigger: CCCCCACCACAGGGCTTCCCACAGGGCTATGGCGCC...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCAAAACTGAACTGTGGTaGGGCGCCATAGCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPPVPGALLHLQPHKPLKTELW*GAIALW Trigger: CCACAGGGCTATGGCGCCCCACCACAGTTCAGTTTT...GAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAGACTTCAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCAGCCAAAACTGAACTGTaGTGGGGCGCCATAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PETSALPPVPGALLHLQPAKTEL*WGAIAL Trigger: CAGGGCTATGGCGCCCCACCACAGTTCAGTTTTGGC...TGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTGAAGTCTCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GTCAATGGGAACCTGAGCCCTACTGAGGGGCCTCCAGCAAGGCCTTGCCTGCCAGGGTCCGAGAAGCCCTaGCCGAAGCCACTCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VNGNLSPTEGPPARPCLPGSEKP*PKPLKS Trigger: GGACTTGAGTGGCTTCGGCCAGGGCTTCTCGGACCC...TGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCGACAGCCTGGTCCACTaGTTGTTCGTCCTCGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHCHLCQGPCCTCSHTSRDSLVH*LFVLES Trigger: ACTTTCGAGGACGAACAATCAGTGGACCAGGCTGTC...GCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCGGGCGGGGGCTGGCCTaGCCAGCCGTTGGCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FCPECDCHKFTSPESCLPGRGLA*PAVGCT Trigger: AGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCC...GGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGGGCCATATCCTTGTTaGCACGTGGGCGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ECDCHKFTSPESCLPRRHGPYPC*HVGGGW Trigger: CCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCC...ATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAGACTTCAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCAGTAGAGTCTCTTGAGTaGTACTCCAGTCCAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PETSALPPVPGALLHLQPVESLE*YSSPGR Trigger: GCGGCCTGGACTGGAGTACCACTCAAGAGACTCTAC...TGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTGAAGTCTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCGAGACTTCAGCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCAAATGGCCTGTCCTGCTaGCACCCACATTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PETSALPPVPGALLHLQPNGLSC*HPHSLW Trigger: CCACAAGGAATGTGGGTGCCAGCAGGACAGGCCATT...TGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGCTGAAGTCTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCAAAGCAAGGAAAACTGATCAGGGGGTaGGGGAGGAGGACCGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCQGPCCTCSHTSRSKQGKLIRG*GRRTVA Trigger: GGCTACGGTCCTCCTCCCCCACCCCCTGATCAGTTT...TCCTTGCTTTGAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGGGTCCGAGAAGCCCTaGCCGAAGCCACTCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPSVIVTSSPVPNPACPAGSEKP*PKPLKS Trigger: GGACTTGAGTGGCTTCGGCCAGGGCTTCTCGGACCC...GGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGATACAATGTAGGAGGTaGAGGGTGGGGGCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTSSPVPNPACPAAMIQCRR*RVGAGA Trigger: CGCCCCCGCCCCCACCCTTCACCTCCTACATTGTAT...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGATGTCTGGGGCAGCCTaGGACGGAGGTGGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTSSPVPNPACPAAMMSGAA*DGGGGK Trigger: CTTCCCACCACCTCCGTCTCAGGCTGCCCCAGACAT...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCTGCACGTTGTGGTTCTaGCCGCGTCCGAAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VPSVIVTSSPVPNPACPACTLWF*PRPKPL Trigger: CAGTGGCTTCGGACGCGGGCAGAACCACAACGTGCA...GGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCGGGTGTGTGGTCTGCTaGCCAGCACTGTCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CPECDCHKFTSPESCLPRGCVVC*PALSPH Trigger: GTGTGGGGACAGTGCTGGCCAGCAGACCACACACCC...GCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCTGCATGTTGACAGCCTaGTCCACTGATTGTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALPPVPGALLHLQPHKPLCMLTA*STDCSS Trigger: GGACGAACAATCAGTGGACCAGGCTGTCAACATGCA...GAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGATTCTTGCTGTCCCGTaGTTCAGCCCGTTTAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPCLPHLCGWGPGHPRLQILAVP*FSPFNL Trigger: GAGGTTAAACGGGCTGAACCACGGGACAGCAAGAAT...CTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCCACCCACATTCCTTGTaGGCCATATCCTTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPPVPGALLHLQPHKPLHPHSL*AISLLP Trigger: TGGCAACAAGGATATGGCCCACAAGGAATGTGGGTG...GAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCTGGAGGAGGGACCCCTaGAGGGGCAAACTGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPSVIVTSSPVPNPACPAWRRDP*RGKLIR Trigger: CCTGATCAGTTTGCCCCTCCAGGGGTCCCTCCTCCA...GGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCAGGGCGGCTGCTGGCTaGGGTCCGAGAAGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FCPECDCHKFTSPESCLPRAAAG*GPRSPG Trigger: GCCAGGGCTTCTCGGACCCCAGCCAGCAGCCGCCCT...GGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGGCTGTCCTGGAGCTTaGTTCTTGCTGTCCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSVIVTSSPVPNPACPAGCPGA*FLLSRG Trigger: ACCACGGGACAGCAAGAATCAAGCTCCAGGACAGCC...GGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGACTGGGAAAAGTAGCTaGGTAGAGTCTCTTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPCLPHLCGWGPGHPRLQTGKSS*VESLEW Trigger: CCACTCAAGAGACTCTACGCAGCTACTTTTCCCAGT...CTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGGCATCCCCCGAGGTGTaGACGGCTTCGGGTCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTSSPVPNPACPAAMASPEV*TASGRY Trigger: ATATCGACCCGAAGCCGTGCACACCTCGGGGGATGC...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCTGCACGTTGTGGTTCTaGCCGCGTCCGAAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CPECDCHKFTSPESCLPRCTLWF*PRPKPL Trigger: CAGTGGCTTCGGACGCGGGCAGAACCACAACGTGCA...GCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGCGACAAAGATCTTGTTaGATTTGCTGCTGTCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPCLPHLCGWGPGHPRLQRQRSC*ICCCRS Trigger: GGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCG...CTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGGTCTCCCCGCAGTTGTaGGGAATGCCCCCGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTSSPVPNPACPAAMVSPQL*GMPPTK Trigger: CTTTGTCGGGGGCATTCCCCACAACTGCGGGGAGAC...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | ATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGCCCCTGGGCTCCTGGCTGTCCTaGAGCTTGATTCTTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVTSSPVPNPACPAAMPLGSWLS*SLILAV Trigger: GACAGCAAGAATCAAGCTCCAGGACAGCCAGGAGCC...CAGGGGCATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GTCAATGGGAACCTGAGCCCTACTGAGGGGCCTCCAGCAAGGCCTTGCCTGCCAAAAACTGAACTGTGGTaGGGCGCCATAGCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VNGNLSPTEGPPARPCLPKTELW*GAIALW Trigger: CCACAGGGCTATGGCGCCCCACCACAGTTCAGTTTT...TGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCTGGAGGAGGGACCCCTaGAGGGGCAAACTGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPECDCHKFTSPESCLPRWRRDP*RGKLIR Trigger: CCTGATCAGTTTGCCCCTCCAGGGGTCCCTCCTCCA...GCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGTGCTGCTGTCGCTCCTaGGTCCTTTCTGCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTSSPVPNPACPAAMCCCRS*VLSASL Trigger: AAGGCTGGCAGAAAGGACCCAGGAGCGACAGCAGCA...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092305.6 |
||
| CDS-3UTR TCA 90 bp | TGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCAAAGTTGCCCATGATGTCGTaGAAATGCATGTTGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CHLCQGPCCTCSHTSRSKLPMMS*KCMLTA Trigger: GGCTGTCAACATGCATTTTCACGACATCATGGGCAA...CTTTGAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGCCCCTGAGATCTTGTTGGATTTaGTGCTGTCGCTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVTSSPVPNPACPAAMPLRSCWI*CCRSWV Trigger: GACCCAGGAGCGACAGCAGCAAATCCAACAAGATCT...CAGGGGCATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCATGGGCGCCACGCGGCTaGCCCACTGGCTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPWAPRG*PTGWLL Trigger: CAGGAGCCAGCCAGTGGGGCAGCCGCGTGGCGCCCA...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | CATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCTGGGCGCCACGCGGCTaGCCCACTGGCTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLFCPECDCHKFTSPESCWAPRG*PTGWLL Trigger: CAGGAGCCAGCCAGTGGGGCAGCCGCGTGGCGCCCA...GCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGGGCTCCTGGCTGTCCTaGAGCTTGATTCTTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTSSPVPNPACPAAMGSWLS*SLILAV Trigger: GACAGCAAGAATCAAGCTCCAGGACAGCCAGGAGCC...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCAGCCGTTGGCTGCACTaGGCGCCACGCGGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLFCPECDCHKFTSPESCSRWLH*APRGCP Trigger: GGGGCAGCCGCGTGGCGCCCAGTGCAGCCAACGGCT...GCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GTCAATGGGAACCTGAGCCCTACTGAGGGGCCTCCAGCAAGGCCTTGCCTGCCACACCCACATTCCTTGTaGGCCATATCCTTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNGNLSPTEGPPARPCLPHPHSL*AISLLP Trigger: TGGCAACAAGGATATGGCCCACAAGGAATGTGGGTG...TGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCAGCGGGGCAGCCCCTaGGGTGGCAGGTGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLFCPECDCHKFTSPESCQRGSP*GGRWRR Trigger: CCTCCTCCACCTGCCACCCCAGGGGCTGCCCCGCTG...GCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCGACAGCCTGGTCCACTaGTTGTTCGTCCTCGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPECDCHKFTSPESCLPRDSLVH*LFVLES Trigger: ACTTTCGAGGACGAACAATCAGTGGACCAGGCTGTC...GCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCAGATCTTGTTGGATTTaGTGCTGTCGCTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPSVIVTSSPVPNPACPARSCWI*CCRSWV Trigger: GACCCAGGAGCGACAGCAGCAAATCCAACAAGATCT...GGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GTCAATGGGAACCTGAGCCCTACTGAGGGGCCTCCAGCAAGGCCTTGCCTGCCACGACAAAGATCTTGTTaGATTTGCTGCTGTCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VNGNLSPTEGPPARPCLPRQRSC*ICCCRS Trigger: GGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCG...TGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAAGGGCGGCTGCTGGCTaGGGTCCGAGAAGCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPRAAAG*GPRSPG Trigger: GCCAGGGCTTCTCGGACCCCAGCCAGCAGCCGCCCT...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGAGATCTTGTTGGATTTaGTGCTGTCGCTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVIVTSSPVPNPACPAAMRSCWI*CCRSWV Trigger: GACCCAGGAGCGACAGCAGCAAATCCAACAAGATCT...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCAGGGCCGTGTTCGCTCTaGCTGCATCCCCCGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPGRVVIYFVPSVIVTSSGPCSL*LHPPRC Trigger: ACACCTCGGGGGATGCAGCCAGAGCGAACACGGCCC...TGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAACGCGGCTGCCCCACTaGCTGGCTCCTGGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPTRLPH*LAPGCP Trigger: AGGACAGCCAGGAGCCAGCCAGTGGGGCAGCCGCGT...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCATCCTTGTTGCCACGTaGGCGGGGGCTGGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLFCPECDCHKFTSPESCILVAT*AGAGLP Trigger: GGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGAT...GCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCTGCTGCTGTCGCTCCTaGGTCCTTTCCAGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FCPECDCHKFTSPESCLPCCCRS*VLSSLP Trigger: AGGAAGGCTGGAAAGGACCCAGGAGCGACAGCAGCA...GGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGTGAAAATGCATGTTaGCAGCCTGGTCCACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: CPECDCHKFTSPESCLPRRENAC*QPGPLI Trigger: AATCAGTGGACCAGGCTGTCAACATGCATTTTCACG...GCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATCGTGAAAATGCATGTTaGCAGCCTGGTCCACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ECDCHKFTSPESCLPRRHRENAC*QPGPLI Trigger: AATCAGTGGACCAGGCTGTCAACATGCATTTTCACG...ATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGATGTCTGGGGCAGCCTaGGACGGAGGTGGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFCPECDCHKFTSPESCLMSGAA*DGGGGK Trigger: CTTCCCACCACCTCCGTCTCAGGCTGCCCCAGACAT...CAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCACTGGGAAAAGTAGCTaGGTAGAGTCTCTTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPECDCHKFTSPESCLPRTGKSS*VESLEW Trigger: CCACTCAAGAGACTCTACGCAGCTACTTTTCCCAGT...GCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGGGCCATATCCTTGTTaGCACGTGGGCGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPGPYPC*HVGGGW Trigger: CCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCC...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCATGCACGTTGTGGTTCTaGCCGCGTCCGAAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPGRVVIYFVPSVIVTSSCTLWF*PRPKPL Trigger: CAGTGGCTTCGGACGCGGGCAGAACCACAACGTGCA...TGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGAAACTGATCAGGGGGTaGGGGAGGAGGACCGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFCPECDCHKFTSPESCLKLIRG*GRRTVA Trigger: GGCTACGGTCCTCCTCCCCCACCCCCTGATCAGTTT...CAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGTGGAGGAGGGACCCCTaGAGGGGCAAACTGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFCPECDCHKFTSPESCLWRRDP*RGKLIR Trigger: CCTGATCAGTTTGCCCCTCCAGGGGTCCCTCCTCCA...CAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGGGCTGTCCTGGAGCTTaGTTCTTGCTGTCCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFCPECDCHKFTSPESCLGCPGA*FLLSRG Trigger: ACCACGGGACAGCAAGAATCAAGCTCCAGGACAGCC...CAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCGTCTCCCCGCAGTTGTaGGGAATGCCCCCGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLFCPECDCHKFTSPESCVSPQL*GMPPTK Trigger: CTTTGTCGGGGGCATTCCCCACAACTGCGGGGAGAC...GCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGGCTGTCCTGGAGCTTaGTTCTTGCTGTCCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPGCPGA*FLLSRG Trigger: ACCACGGGACAGCAAGAATCAAGCTCCAGGACAGCC...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCAGTAGAGTCTCTTGAGTaGTACTCCAGTCCAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGRVVIYFVPSVIVTSSVESLE*YSSPGR Trigger: GCGGCCTGGACTGGAGTACCACTCAAGAGACTCTAC...TGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCAAATGGCCTGTCCTGCTaGCACCCACATTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGRVVIYFVPSVIVTSSNGLSC*HPHSLW Trigger: CCACAAGGAATGTGGGTGCCAGCAGGACAGGCCATT...TGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCGCCAAAACTGAACTGTaGTGGGGCGCCATAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLFCPECDCHKFTSPESCAKTEL*WGAIAL Trigger: CAGGGCTATGGCGCCCCACCACAGTTCAGTTTTGGC...GCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCGGCTCCTGGCTGTCCTaGAGCTTGATTCTTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HLFCPECDCHKFTSPESCGSWLS*SLILAV Trigger: GACAGCAAGAATCAAGCTCCAGGACAGCCAGGAGCC...GCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCAATGGCCTGTCCTGCTaGCACCCACATTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVVIYFVPSVIVTSSPVNGLSC*HPHSLW Trigger: CCACAAGGAATGTGGGTGCCAGCAGGACAGGCCATT...GACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCAAAACTGAACTGTGGTaGGGCGCCATAGCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVVIYFVPSVIVTSSPVKTELW*GAIALW Trigger: CCACAGGGCTATGGCGCCCCACCACAGTTCAGTTTT...GACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | CATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCGACAGCCTGGTCCACTaGTTGTTCGTCCTCGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLFCPECDCHKFTSPESCDSLVH*LFVLES Trigger: ACTTTCGAGGACGAACAATCAGTGGACCAGGCTGTC...GCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCATCTTGTTGGATTTGCTaGTGTCGCTCCTGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPGRVVIYFVPSVIVTSSSCWIC*CRSWVL Trigger: AAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGA...TGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGATTCTTGCTGTCCCGTaGTTCAGCCCGTTTAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFCPECDCHKFTSPESCLILAVP*FSPFNL Trigger: GAGGTTAAACGGGCTGAACCACGGGACAGCAAGAAT...CAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCACCCACATTCCTTGTaGGCCATATCCTTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFCPECDCHKFTSPESCLHPHSL*AISLLP Trigger: TGGCAACAAGGATATGGCCCACAAGGAATGTGGGTG...CAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCATTGCCCATGATGTCGTaGAAATGCATGTTGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGRVVIYFVPSVIVTSSLPMMS*KCMLTA Trigger: GGCTGTCAACATGCATTTTCACGACATCATGGGCAA...TGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGTTGCCCATGATGTCGTaGAAATGCATGTTGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFCPECDCHKFTSPESCLLPMMS*KCMLTA Trigger: GGCTGTCAACATGCATTTTCACGACATCATGGGCAA...CAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | GGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCTGCATGTTGACAGCCTaGTCCACTGATTGTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRVVIYFVPSVIVTSSPVCMLTA*STDCSS Trigger: GGACGAACAATCAGTGGACCAGGCTGTCAACATGCA...GACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCACGACAAAGATCTTGTTaGATTTGCTGCTGTCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPRQRSC*ICCCRS Trigger: GGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCG...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAAAGCCTCTAGACTaGTTGGTGGTTTTATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGRVVIYFVPSVIVTSSPKPLD*LVVLSF Trigger: GAAAGATAAAACCACCAACCAGTCTAGAGGCTTTGG...TGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCAAAGCCTCTAGACTaGTTGGTGGTTTTATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFCPECDCHKFTSPESCLPKPLD*LVVLSF Trigger: GAAAGATAAAACCACCAACCAGTCTAGAGGCTTTGG...CAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 90 bp | GTTGCCACGTGGGCGGGGGCTGGCCTGCCCAGCCGTTGGCTGCACTaGGCGCCACGCGGCTGCCCCACTGGCTGGCTCCTGGCTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VATWAGAGLPSRWLH*APRGCPTGWLLAVL Trigger: CAGGACAGCCAGGAGCCAGCCAGTGGGGCAGCCGCGTGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAAC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS GCA 90 bp | TCCTTGTTGCCACGTGGGCGGGGGCTGGCCTGCCCAGCCGTTGGCTaGACTGGGCGCCACGCGGCTGCCCCACTGGCTGGCTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLPRGRGLACPAVG*TGRHAAAPLAGSWL Trigger: CAGCCAGGAGCCAGCCAGTGGGGCAGCCGCGTGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACCCGAACCCTGCTTTGTGGGCCATATCCTaGTTGCCACGTGGGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PARAGGSQGSRFPHPNPALWAIS*LPRGRG Trigger: CCCCCGCCCACGTGGCAACAAGGATATGGCCCACAA...AGCAGGGTTCGGGTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCGCACCCCAGCCCGCGCCGGCGGGAGCCAGGGCTCCCGCTTCCCACACTGGCTGTCCTGGAGCTaGATTCTTGCTGTCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SARTPARAGGSQGSRFPHWLSWS*ILAVPW Trigger: CCACGGGACAGCAAGAATCAAGCTCCAGGACAGCCA...GTGTGGGAAGCGGGAGCCCTGGCTCCCGCCGGCGCGGGCTGGGGTGCGGGCAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS CCA 90 bp | CACATTCCTTGTGGGCCATATCCTTGTTGCCACGTGGGCGGGGGCTaGCCTGCCCAGCCGTTGGCTGCACTGGGCGCCACGCGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HIPCGPYPCCHVGGG*PAQPLAALGATRLP Trigger: GGGCAGCCGCGTGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCACAAGGAATGTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 90 bp | CCGAACCTGGTACAGAGGGGCCCCCATAGGAGGGCGGCTGCTGGCTaGGGTCCGAGAAGCCCTGGCCGAAGCCACTCAAGTCCTGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PNLVQRGPHRRAAAG*GPRSPGRSHSSPAR Trigger: ACGGGCAGGACTTGAGTGGCTTCGGCCAGGGCTTCTCGGACCCCAGCCAGCAGCCGCCCTCCTATGGGGGCCCCTCTGTACCAGGTTCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTGGGCCATATCCTTGTaGCCACGTGGGCGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QQGLACHTCVGGAQATRDWAISL*PRGRGL Trigger: CAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCA...GTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS CCA 90 bp | CTGCTGGCACCCACATTCCTTGTGGGCCATATCCTTGTTGCCACGTaGGCGGGGGCTGGCCTGCCCAGCCGTTGGCTGCACTGGGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLAPTFLVGHILVAT*AGAGLPSRWLHWAP Trigger: TGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCACAAGGAATGTGGGTGCCAGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | GTCAATGGGAACCTGAGCCCTACTGAGGGGCCTCCAGCAAGGCCTTGCCTGCCATGGCCTGCCCAGCCGTaGGCTGCACTGGGCGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: VNGNLSPTEGPPARPCLPWPAQP*AALGAT Trigger: CGTGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCA...TGGCAGGCAAGGCCTTGCTGGAGGCCCCTCAGTAGGGCTCAGGTTCCCATTGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCCACCTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCAGTCCGGCTGGGCTGTaGGGGGTTTGCTCATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALPPVPGALLHLQPHKPLSPAGL*GVCSCL Trigger: CAGACATGAGCAAACCCCCAACAGCCCAGCCGGACT...GAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAGGTGGCAGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGTGGCTGTCCTGGAGCTaGATTCTTGCTGTCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPCLPHLCGWGPGHPRLQWLSWS*ILAVPW Trigger: CCACGGGACAGCAAGAATCAAGCTCCAGGACAGCCA...CTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS CCA 90 bp | GCTCCTGGGTCCTTTCTGCCAGCCTTCCTTGGGCCGTGTTCGCTCTaGCTGCATCCCCCGAGGTGTGCACGGCTTCGGGTCGATATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: APGSFLPAFLGPCSL*LHPPRCARLRVDIS Trigger: CGAAATATCGACCCGAAGCCGTGCACACCTCGGGGGATGCAGCCAGAGCGAACACGGCCCAAGGAAGGCTGGCAGAAAGGACCCAGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092305.6 |
||
| CDS CCA 90 bp | GTCGCTCCTGGGTCCTTTCCAGCCTTCCTTGGGCCGTGTTCGCTCTaGCTGCATCCCCCGAGGTGTGCACGGCTTCGGGTCGATATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VAPGSFPAFLGPCSL*LHPPRCARLRVDIS Trigger: CGAAATATCGACCCGAAGCCGTGCACACCTCGGGGGATGCAGCCAGAGCGAACACGGCCCAAGGAAGGCTGGAAAGGACCCAGGAGCGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCTGGGCCATATCCTTGTaGCCACGTGGGCGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPSVIVTSSPVPNPACPAWAISL*PRGRGL Trigger: CAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCA...GGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCTGGAAGCCCTGCACGTaGTGGTTCTGCCCGCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VPSVIVTSSPVPNPACPAWKPCT*WFCPRP Trigger: CGGACGCGGGCAGAACCACAACGTGCAGGGCTTCCA...GGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS GCA 90 bp | AGCCTTCCTTGGGCCGTGTTCGCTCTGGCTGCATCCCCCGAGGTGTaGACGGCTTCGGGTCGATATTTCGGCCATCTAGGGTGTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLPWAVFALAASPEV*TASGRYFGHLGCVV Trigger: GACCACACACCCTAGATGGCCGAAATATCGACCCGAAGCCGTGCACACCTCGGGGGATGCAGCCAGAGCGAACACGGCCCAAGGAAGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACAAGATCTTGTTGGATTaGCTGCTGTCGCTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QQGLACHTCVGGAQATRDKILLD*LLSLLG Trigger: ACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTT...GTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTCCCCCGACAAAGATCTaGTTGGATTTGCTGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SKALPATPVWVGPRPPETPPTKI*LDLLLS Trigger: CGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGG...AGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCTTGTGGGCCATATCCTaGTTGCCACGTGGGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPSVIVTSSPVPNPACPALWAIS*LPRGRG Trigger: CCCCCGCCCACGTGGCAACAAGGATATGGCCCACAA...GGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 90 bp | ACTGAACTGTGGTGGGGCGCCATAGCCCTGTGGGAAGCCCTGTGGTaGGGGGAAGCCTCCAGGCGGTGTGGATACAATGTAGGAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TELWWGAIALWEALW*GEASRRCGYNVGGE Trigger: TTCACCTCCTACATTGTATCCACACCGCCTGGAGGCTTCCCCCCACCACAGGGCTTCCCACAGGGCTATGGCGCCCCACCACAGTTCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGCACTGCACCACTCCAAACTTCTaGAAGTACTCCCTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLPHLCGWGPGHPRLQHCTTPNF*KYSLSS Trigger: GGAGCTCAGGGAGTACTTCAAGAAGTTTGGAGTGGT...GCAGTGCTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAAAGATCTTGTTGGATTaGCTGCTGTCGCTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KALPATPVWVGPRPPETSKILLD*LLSLLG Trigger: ACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTT...TGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGAGTCCGGCTGGGCTGTaGGGGGTTTGCTCATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVIVTSSPVPNPACPAAMSPAGL*GVCSCL Trigger: CAGACATGAGCAAACCCCCAACAGCCCAGCCGGACT...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGCCCCTGCTGCCCGTAACCATATaGACCATAGGGGAAGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IVTSSPVPNPACPAAMPLLPVTI*TIGEVR Trigger: CCGGACTTCCCCTATGGTCAATATGGTTACGGGCAG...CAGGGGCATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCCAGGGGCCCTGTTGCACCTGCAGCCACACAAGCCGCTCAAAGCAAGGACTGCCCGTAACCATATaGACCATAGGGGAAGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LCQGPCCTCSHTSRSKQGLPVTI*TIGEVR Trigger: CCGGACTTCCCCTATGGTCAATATGGTTACGGGCAG...TCCTTGCTTTGAGCGGCTTGTGTGGCTGCAGGTGCAACAGGGCCCCTGGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACAAGCCTCTAGACTGGTaGGTGGTTTTATCTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QQGLACHTCVGGAQATRDKPLDW*VVLSFM Trigger: CATGAAAGATAAAACCACCAACCAGTCTAGAGGCTT...GTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | TGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTTCAGCACTGCACTGTCCCCACACAATaGGGGTCTTTAAACTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CLPHLCGWGPGHPRLQHCTVPTQ*GSLNLT Trigger: TGTCAAGTTTAAAGACCCCAATTGTGTGGGGACAGT...GCAGTGCTGAAGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS GCA 90 bp | CGCAGTTGTGGGGAATGCCCCCGACAAAGATCTTGTTGGATTTGCTaGTGTCGCTCCTGGGTCCTTTCCAGCCTTCCTTGGGCCGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSCGECPRQRSCWIC*CRSWVLSSLPWAVF Trigger: GAACACGGCCCAAGGAAGGCTGGAAAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGGCATTCCCCACAACTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS CCA 90 bp | GAATGCCCCCGACAAAGATCTTGTTGGATTTGCTGCTGTCGCTCCTaGGTCCTTTCCAGCCTTCCTTGGGCCGTGTTCGCTCTGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ECPRQRSCWICCCRS*VLSSLPWAVFALAA Trigger: TGCAGCCAGAGCGAACACGGCCCAAGGAAGGCTGGAAAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGGCATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGCCTTGCCTGCCACACCTGTGTGGGTGGGGCCCAGGCCACCCGAGACTAAGCCTCTAGACTGGTaGGTGGTTTTATCTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SKALPATPVWVGPRPPETKPLDW*VVLSFM Trigger: CATGAAAGATAAAACCACCAACCAGTCTAGAGGCTT...AGTCTCGGGTGGCCTGGGCCCCACCCACACAGGTGTGGCAGGCAAGGCCTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092305.6 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCATGGCCTGCCCAGCCGTaGGCTGCACTGGGCGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPWPAQP*AALGAT Trigger: CGTGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCA...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGCCCGTAACCTGCATATaGACCATAGGGGAAGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVIVTSSPVPNPACPAAMPVTCI*TIGEVR Trigger: CCGGACTTCCCCTATGGTCAATATGCAGGTTACGGG...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105361.10 |
||
| CDS-3UTR CAA 90 bp | GAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATCCCCCGACAAAGATCTaGTTGGATTTGCTGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ECDCHKFTSPESCLPRRHPPTKI*LDLLLS Trigger: CGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGG...ATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGCCCCTGACTGTCCCCACACAATaGGGGTCTTTAAACTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: IVTSSPVPNPACPAAMPLTVPTQ*GSLNLT Trigger: TGTCAAGTTTAAAGACCCCAATTGTGTGGGGACAGT...CAGGGGCATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCACCACTCCAAACTTCTaGAAGTACTCCCTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPECDCHKFTSPESCLPRTTPNF*KYSLSS Trigger: GGAGCTCAGGGAGTACTTCAAGAAGTTTGGAGTGGT...GCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATACCACTCCAAACTTCTaGAAGTACTCCCTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ECDCHKFTSPESCLPRRHTTPNF*KYSLSS Trigger: GGAGCTCAGGGAGTACTTCAAGAAGTTTGGAGTGGT...ATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGTGGAAGCCCTGCACGTaGTGGTTCTGCCCGCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LFCPECDCHKFTSPESCLWKPCT*WFCPRP Trigger: CGGACGCGGGCAGAACCACAACGTGCAGGGCTTCCA...CAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 90 bp | CCAAACTTCTTGAAGTACTCCCTGAGCTCCGTCTCCCCGCAGTTGTaGGGAATGCCCCCGACAAAGATCTTGTTGGATTTGCTGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PNFLKYSLSSVSPQL*GMPPTKILLDLLLS Trigger: CGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGGCATTCCCCACAACTGCGGGGAGACGGAGCTCAGGGAGTACTTCAAGAAGTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS-3UTR CAA 90 bp | CATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCTGGGCCATATCCTTGTaGCCACGTGGGCGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLFCPECDCHKFTSPESCWAISL*PRGRGL Trigger: CAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCA...GCAGGATTCGGGACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCATGGAAGCCCTGCACGTaGTGGTTCTGCCCGCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPWKPCT*WFCPRP Trigger: CGGACGCGGGCAGAACCACAACGTGCAGGGCTTCCA...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 90 bp | CAACCTCACCATACTGGGAAAAGTAGCTGCGTAGAGTCTCTTGAGTaGTACTCCAGTCCAGGCCGCCCACAAAGAGCTTCCCGATTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: QPHHTGKSSCVESLE*YSSPGRPQRASRFR Trigger: ACGAAATCGGGAAGCTCTTTGTGGGCGGCCTGGACTGGAGTACCACTCAAGAGACTCTACGCAGCTACTTTTCCCAGTATGGTGAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCATTGTGGGCCATATCCTaGTTGCCACGTGGGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPLWAIS*LPRGRG Trigger: CCCCCGCCCACGTGGCAACAAGGATATGGCCCACAA...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGATTGTCACAAGTTCACCAGTCCCGAATCCTGCCTGCCCCGCCGCCATGAAGCCTCTAGACTGGTaGGTGGTTTTATCTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SVIVTSSPVPNPACPAAMKPLDW*VVLSFM Trigger: CATGAAAGATAAAACCACCAACCAGTCTAGAGGCTT...CATGGCGGCGGGGCAGGCAGGATTCGGGACTGGTGAACTTGTGACAATCACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCATGGCTGTCCTGGAGCTaGATTCTTGCTGTCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPGRVVIYFVPSVIVTSSWLSWS*ILAVPW Trigger: CCACGGGACAGCAAGAATCAAGCTCCAGGACAGCCA...TGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAAGTCCGGCTGGGCTGTaGGGGGTTTGCTCATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGRVVIYFVPSVIVTSSPSPAGL*GVCSCL Trigger: CAGACATGAGCAAACCCCCAACAGCCCAGCCGGACT...TGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCAAAGATCTTGTTGGATTaGCTGCTGTCGCTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPGRVVIYFVPSVIVTSSKILLD*LLSLLG Trigger: ACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTT...TGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACCTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS-3UTR CAA 90 bp | GGTCGAGTGGTCATTTATTTTGTCCCGAGTGTGATTGTCACAAGTTCACCAGTCCCCCCGACAAAGATCTaGTTGGATTTGCTGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GRVVIYFVPSVIVTSSPVPPTKI*LDLLLS Trigger: CGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGG...GACTGGTGAACTTGTGACAATCACACTCGGGACAAAATAAATGACCACTCGACC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS TCA 90 bp | TTTGCCCATGATGTCGTGAAAATGCATGTTGACAGCCTGGTCCACTaGTTGTTCGTCCTCGAAAGTAATAAATCCAAAACCTCGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FAHDVVKMHVDSLVH*LFVLESNKSKTSRP Trigger: CGGCCTCGAGGTTTTGGATTTATTACTTTCGAGGACGAACAATCAGTGGACCAGGCTGTCAACATGCATTTTCACGACATCATGGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS GCA 72 bp | CCACGTGGGCGGGGGCTGGCCTGCCCAGCCGTTGGCTaGACTGGGCGCCACGCGGCTGCCCCACTGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRGRGLACPAVG*TGRHAAAPLAG Trigger: GCCAGCCAGTGGGGCAGCCGCGTGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 72 bp | TGGGCGGGGGCTGGCCTGCCCAGCCGTTGGCTGCACTaGGCGCCACGCGGCTGCCCCACTGGCTGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: WAGAGLPSRWLH*APRGCPTGWLL Trigger: CAGGAGCCAGCCAGTGGGGCAGCCGCGTGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS GCA 72 bp | GCCATATCCTTGTTGCCACGTGGGCGGGGGCTGGCCTaGCCAGCCGTTGGCTGCACTGGGCGCCACGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AISLLPRGRGLA*PAVGCTGRHAA Trigger: AGCCGCGTGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGATATGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 72 bp | TGTGGGCCATATCCTTGTTGCCACGTGGGCGGGGGCTaGCCTGCCCAGCCGTTGGCTGCACTGGGCGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: CGPYPCCHVGGG*PAQPLAALGAT Trigger: CGTGGCGCCCAGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 72 bp | GTACAGAGGGGCCCCCATAGGAGGGCGGCTGCTGGCTaGGGTCCGAGAAGCCCTGGCCGAAGCCACTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: VQRGPHRRAAAG*GPRSPGRSHSS Trigger: ACTTGAGTGGCTTCGGCCAGGGCTTCTCGGACCCCAGCCAGCAGCCGCCCTCCTATGGGGGCCCCTCTGTAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS GCA 72 bp | GCTGGCACCCACATTCCTTGTGGGCCATATCCTTGTTaGCACGTGGGCGGGGGCTGGCCTGCCCAGCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AGTHIPCGPYPC*HVGGGWPAQPL Trigger: CAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCACAAGGAATGTGGGTGCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 72 bp | CCCACATTCCTTGTGGGCCATATCCTTGTTGCCACGTaGGCGGGGGCTGGCCTGCCCAGCCGTTGGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PTFLVGHILVAT*AGAGLPSRWLH Trigger: GTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCACAAGGAATGTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 72 bp | GGGTCCTTTCCAGCCTTCCTTGGGCCGTGTTCGCTCTaGCTGCATCCCCCGAGGTGTGCACGGCTTCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GSFPAFLGPCSL*LHPPRCARLRV Trigger: GACCCGAAGCCGTGCACACCTCGGGGGATGCAGCCAGAGCGAACACGGCCCAAGGAAGGCTGGAAAGGACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS CAA 72 bp | TCCTGCTGGCACCCACATTCCTTGTGGGCCATATCCTaGTTGCCACGTGGGCGGGGGCTGGCCTGCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCWHPHSLWAIS*LPRGRGLACPA Trigger: GGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCACAAGGAATGTGGGTGCCAGCAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 72 bp | TCCTTTCTGCCAGCCTTCCTTGGGCCGTGTTCGCTCTaGCTGCATCCCCCGAGGTGTGCACGGCTTCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SFLPAFLGPCSL*LHPPRCARLRV Trigger: GACCCGAAGCCGTGCACACCTCGGGGGATGCAGCCAGAGCGAACACGGCCCAAGGAAGGCTGGCAGAAAGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092305.6 |
||
| CDS CCA 72 bp | TGCTGTCGCTCCTGGGTCCTTTCTGCCAGCCTTCCTTaGGCCGTGTTCGCTCTGGCTGCATCCCCCGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CCRSWVLSASLP*AVFALAASPEV Trigger: CACCTCGGGGGATGCAGCCAGAGCGAACACGGCCCAAGGAAGGCTGGCAGAAAGGACCCAGGAGCGACAGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092305.6 |
||
| CDS CAA 72 bp | TGCTGGCACCCACATTCCTTGTGGGCCATATCCTTGTaGCCACGTGGGCGGGGGCTGGCCTGCCCAGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: CWHPHSLWAISL*PRGRGLACPAV Trigger: AACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCACAAGGAATGTGGGTGCCAGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS GCA 72 bp | TGGGCCGTGTTCGCTCTGGCTGCATCCCCCGAGGTGTaGACGGCTTCGGGTCGATATTTCGGCCATCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WAVFALAASPEV*TASGRYFGHLG Trigger: CCCTAGATGGCCGAAATATCGACCCGAAGCCGTGCACACCTCGGGGGATGCAGCCAGAGCGAACACGGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS CCA 72 bp | TGGTGGGGCGCCATAGCCCTGTGGGAAGCCCTGTGGTaGGGGGAAGCCTCCAGGCGGTGTGGATACAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: WWGAIALWEALW*GEASRRCGYNV Trigger: TACATTGTATCCACACCGCCTGGAGGCTTCCCCCCACCACAGGGCTTCCCACAGGGCTATGGCGCCCCACCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS CCA 72 bp | TGGGGGAGGAGGACCGTAGCCAAAACTGAACTGTGGTaGGGCGCCATAGCCCTGTGGGAAGCCCTGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WGRRTVAKTELW*GAIALWEALWW Trigger: CCACCACAGGGCTTCCCACAGGGCTATGGCGCCCCACCACAGTTCAGTTTTGGCTACGGTCCTCCTCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 |
||
| CDS GCA 72 bp | TCGGGTCGATATTTCGGCCATCTAGGGTGTGTGGTCTaGTGGCCAGCACTGTCCCCACACAATTGGGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGRYFGHLGCVV*WPALSPHNWGL Trigger: AAGACCCCAATTGTGTGGGGACAGTGCTGGCCAGCAGACCACACACCCTAGATGGCCGAAATATCGACCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS GCA 72 bp | GGGGAATGCCCCCGACAAAGATCTTGTTGGATTTGCTaGTGTCGCTCCTGGGTCCTTTCTGCCAGCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GECPRQRSCWIC*CRSWVLSASLP Trigger: AGGAAGGCTGGCAGAAAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGGCATTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092305.6 |
||
| CDS CAA 72 bp | CCGCAGTTGTGGGGAATGCCCCCGACAAAGATCTTGTaGGATTTGCTGCTGTCGCTCCTGGGTCCTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PQLWGMPPTKIL*DLLLSLLGPFC Trigger: GCAGAAAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGGCATTCCCCACAACTGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092305.6 |
||
| CDS CAA 72 bp | CCGCAGTTGTGGGGAATGCCCCCGACAAAGATCTTGTaGGATTTGCTGCTGTCGCTCCTGGGTCCTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQLWGMPPTKIL*DLLLSLLGPFQ Trigger: CTGGAAAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGGCATTCCCCACAACTGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS GCA 72 bp | TGTGGGGAATGCCCCCGACAAAGATCTTGTTGGATTTaGTGCTGTCGCTCCTGGGTCCTTTCTGCCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CGECPRQRSCWI*CCRSWVLSASL Trigger: AAGGCTGGCAGAAAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCGGGGGCATTCCCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092305.6 |
||
| CDS CCA 72 bp | CGACAAAGATCTTGTTGGATTTGCTGCTGTCGCTCCTaGGTCCTTTCCAGCCTTCCTTGGGCCGTGTTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RQRSCWICCCRS*VLSSLPWAVFA Trigger: AGCGAACACGGCCCAAGGAAGGCTGGAAAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS CCA 72 bp | CATACTGGGAAAAGTAGCTGCGTAGAGTCTCTTGAGTaGTACTCCAGTCCAGGCCGCCCACAAAGAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HTGKSSCVESLE*YSSPGRPQRAS Trigger: GGAAGCTCTTTGTGGGCGGCCTGGACTGGAGTACCACTCAAGAGACTCTACGCAGCTACTTTTCCCAGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS CCA 72 bp | TTGAAGTACTCCCTGAGCTCCGTCTCCCCGCAGTTGTaGGGAATGCCCCCGACAAAGATCTTGTTGGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LKYSLSSVSPQL*GMPPTKILLDL Trigger: CAAATCCAACAAGATCTTTGTCGGGGGCATTCCCCACAACTGCGGGGAGACGGAGCTCAGGGAGTACTTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS CAA 90 bp | CCATCTAGGGTGTGTGGTCTGCTGGCCAGCACTGTCCCCACACAATaGGGGTCTTTAAACTTGACAAATCCAAAGCCTCTAGACTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PSRVCGLLASTVPTQ*GSLNLTNPKPLDWL Trigger: CAACCAGTCTAGAGGCTTTGGATTTGTCAAGTTTAAAGACCCCAATTGTGTGGGGACAGTGCTGGCCAGCAGACCACACACCCTAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS CAA 72 bp | GTGTGTGGTCTGCTGGCCAGCACTGTCCCCACACAATaGGGGTCTTTAAACTTGACAAATCCAAAGCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: VCGLLASTVPTQ*GSLNLTNPKPL Trigger: TAGAGGCTTTGGATTTGTCAAGTTTAAAGACCCCAATTGTGTGGGGACAGTGCTGGCCAGCAGACCACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||
| CDS TCA 72 bp | GATGTCGTGAAAATGCATGTTGACAGCCTGGTCCACTaGTTGTTCGTCCTCGAAAGTAATAAATCCAAAACC | + |
|
Preference number: 6 (lower is better) Translates to: DVVKMHVDSLVH*LFVLESNKSKT Trigger: GGTTTTGGATTTATTACTTTCGAGGACGAACAATCAGTGGACCAGGCTGTCAACATGCATTTTCACGACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092305.6 ENSMUST00000105361.10 ENSMUST00000105362.8 ENSMUST00000156935.8 |
||