Pregenerated sensors for DAW1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053161Ensembl transcript IDs: ENSMUST00000065403.7, ENSMUST00000065436.10, ENSMUST00000113436.8, ENSMUST00000149342.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCAAGGACCTGGAGGCACTGGCCAGTCTGAACATCCCAGATTCTaGCTGTCTTATCAGAGCTGCCCGTCAGGAGCCGGTTTCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: PQGPGGTGQSEHPRF*LSYQSCPSGAGFLG Trigger: CCCAAGGAAACCGGCTCCTGACGGGCAGCTCTGATAAGACAGCCAGAATCTGGGATGTTCAGACTGGCCAGTGCCTCCAGGTCCTTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR TCA 90 bp | GAGGCAGAGGACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTaGTCACTGTTGCCAACAGCCCTGCTCCATAGCAGAGCCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: EAEDIGSLALWSSSS*SLLPTALLHSRALG Trigger: CCCAAGGGCTCTGCTATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTCCTCTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000149342.8 |
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| 3UTR GCA 90 bp | TTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTGCCAACAGCCCTaGTCCATAGCAGAGCCCTTGGGTCAACGCCATATCCTGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LLSGVQVLDHCCQQP*SIAEPLGQRHILQE Trigger: CTCCTGCAGGATATGGCGTTGACCCAAGGGCTCTGCTATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR GCA 90 bp | CACCTTGCAGGTCCGATCATAGCTTCCGGTGATAAAGCAGGAGCCTaGTTTGTTGAGTGCCACGTTGGTCAATGGCAATATGTGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: HLAGPIIASGDKAGA*FVECHVGQWQYVCS Trigger: AGAGCACACATATTGCCATTGACCAACGTGGCACTCAACAAAGCAGGCTCCTGCTTTATCACCGGAAGCTATGATCGGACCTGCAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR CCA 90 bp | GTGTGCACCTTCCTTCCAGTACTAGCATCCCATACTACAACTGTGTaGTCAAAGGACCCTGTGATGATTCTGTCTCCTGAGGTGTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: VCTFLPVLASHTTTV*SKDPVMILSPEVSN Trigger: GTTTGACACCTCAGGAGACAGAATCATCACAGGGTCCTTTGACCACACAGTTGTAGTATGGGATGCTAGTACTGGAAGGAAGGTGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR TCA 90 bp | AGAGAGCAATCCCAATTGAACAAGGCGCTGCTGATCTCAGCACAGTaGCCAATTAAAGTGTGCACCTTCCTTCCAGTACTAGCATCCCAT | + |
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Preference number: 1 (lower is better) Translates to: REQSQLNKALLISAQ*PIKVCTFLPVLASH Trigger: ATGGGATGCTAGTACTGGAAGGAAGGTGCACACTTTAATTGGTCACTGTGCTGAGATCAGCAGCGCCTTGTTCAATTGGGATTGCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR GCA 90 bp | CCGATCATAGCTTCCGGTGATAAAGCAGGAGCCTGCTTTGTTGAGTaGCACGTTGGTCAATGGCAATATGTGTGCTCTGAGAACCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: PIIASGDKAGACFVE*HVGQWQYVCSENLK Trigger: TTTAAGGTTCTCAGAGCACACATATTGCCATTGACCAACGTGGCACTCAACAAAGCAGGCTCCTGCTTTATCACCGGAAGCTATGATCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR CCA 90 bp | AATTTGGCTGTAGTATCCATACTTCCAGTAGCAACCACTGTACTTTaGGGGTTGAATGATAAACATACAATCTCTGCTGTGTGGCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: NLAVVSILPVATTVL*GLNDKHTISAVWPL Trigger: CAGGGGCCACACAGCAGAGATTGTATGTTTATCATTCAACCCCCAAAGTACAGTGGTTGCTACTGGAAGTATGGATACTACAGCCAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR GCA 90 bp | TTCCAGTTTGGTTACACACTTTCTTGTGGTTGCATTGTAAACTCTTaGCGTTCCATCGGCAGAAGCTGTTGCGATAAGTTTTCCAGTATA | + |
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Preference number: 1 (lower is better) Translates to: FQFGYTLSCGCIVNS*RSIGRSCCDKFSSI Trigger: TATACTGGAAAACTTATCGCAACAGCTTCTGCCGATGGAACGGCAAGAGTTTACAATGCAACCACAAGAAAGTGTGTAACCAAACTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGATTCTGGCTGTCTTATCAGAGCTGCCCGTCAGGAGCCGGTTTCCTTGGCCGTGTCCCACACCTTaGAGGTCCGATCATAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SQILAVLSELPVRSRFPWPCPTP*RSDHSF Trigger: GAAGCTATGATCGGACCTGCAAGGTGTGGGACACGG...CCAAGGAAACCGGCTCCTGACGGGCAGCTCTGATAAGACAGCCAGAATCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGATTCTGGCTGTCTTATCAGAGCTGCCCGTCAGGAGCCGGTTTCCTTGGCTGCTGTGTGGCCCCTaGAGGTATGGTAACACTTTC | + |
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Preference number: 2 (lower is better) Translates to: SQILAVLSELPVRSRFPWLLCGP*RYGNTF Trigger: GAAAGTGTTACCATACCTTCAGGGGCCACACAGCAG...CCAAGGAAACCGGCTCCTGACGGGCAGCTCTGATAAGACAGCCAGAATCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR CCA 90 bp | GGACCTGGAGGCACTGGCCAGTCTGAACATCCCAGATTCTGGCTGTCTTATCAGTACACCACATTCTTGTaGCCCTCCAGGGTGTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GPGGTGQSEHPRFWLSYQYTTFL*PSRVCS Trigger: GCTGCACACCCTGGAGGGCCACAAGAATGTGGTGTA...CTGATAAGACAGCCAGAATCTGGGATGTTCAGACTGGCCAGTGCCTCCAGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR CAA 90 bp | GTTCTTGATCACTGTTGCCAACAGCCCTGCTCCATAGCAGAGCCCTaGGGTCAACGCCATATCCTGCAGGAGTTGTCCTTGCTGCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: VLDHCCQQPCSIAEP*GQRHILQELSLLPV Trigger: TACAGGCAGCAAGGACAACTCCTGCAGGATATGGCGTTGACCCAAGGGCTCTGCTATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR CCA 90 bp | GGACCTGGAGGCACTGGCCAGTCTGAACATCCCAGATTCTGGCTGTCTTATCAGGAGATTTCTCCTTCATaGCCTTCCAGTTTGGTTACA | + |
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Preference number: 2 (lower is better) Translates to: GPGGTGQSEHPRFWLSYQEISPS*PSSLVT Trigger: TGTAACCAAACTGGAAGGCCATGAAGGAGAAATCTC...CTGATAAGACAGCCAGAATCTGGGATGTTCAGACTGGCCAGTGCCTCCAGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR CAA 90 bp | GCTGTAGTATCCATACTTCCAGTAGCAACCACTGTACTTTGGGGGTaGAATGATAAACATACAATCTCTGCTGTGTGGCCCCTGAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: AVVSILPVATTVLWG*NDKHTISAVWPLKV Trigger: TACCTTCAGGGGCCACACAGCAGAGATTGTATGTTTATCATTCAACCCCCAAAGTACAGTGGTTGCTACTGGAAGTATGGATACTACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGCATCCCATACTACAACTGTGTGGTCAAAGGACCCTGTGATGATTCTGTCTATGGTGAAGGCTCATTaGTTTTCATGGTCATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LASHTTTVWSKDPVMILSMVKAH*FSWSCL Trigger: CAGACATGACCATGAAAACCAATGAGCCTTCACCAT...AGACAGAATCATCACAGGGTCCTTTGACCACACAGTTGTAGTATGGGATGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAGTTCTTGATCACTGTTaGCAACAGCCCTGCTCCATA | + |
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Preference number: 2 (lower is better) Translates to: SDVICQYPGAIETQNTTEVLDHC*QQPCSI Trigger: TATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAAC...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000149342.8 |
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| 3UTR-3UTR TCA 90 bp | CCATATCCTGCAGGAGTTGTCCTTGCTGCCTGTAATGACTATATTCCCTTTATAATTGAAGGAGATCTTTaGGATTTCTCCTTCATGGCC | + |
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Preference number: 2 (lower is better) Translates to: PYPAGVVLAACNDYIPFIIEGDL*DFSFMA Trigger: GGCCATGAAGGAGAAATCTCAAAGATCTCCTTCAAT...TATAAAGGGAATATAGTCATTACAGGCAGCAAGGACAACTCCTGCAGGATATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAATGTCAGAAAATGGTaGAGGCTCATTGGTTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SDVICQYPGAIETQNTTENVRKW*RLIGFH Trigger: ATGAAAACCAATGAGCCTTCACCATTTTCTGACATT...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 ENSMUST00000149342.8 |
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| 3UTR CCA 72 bp | CCTGGAGGCACTGGCCAGTCTGAACATCCCAGATTCTaGCTGTCTTATCAGAGCTGCCCGTCAGGAGCCGGT | + |
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Preference number: 3 (lower is better) Translates to: PGGTGQSEHPRF*LSYQSCPSGAG Trigger: ACCGGCTCCTGACGGGCAGCTCTGATAAGACAGCCAGAATCTGGGATGTTCAGACTGGCCAGTGCCTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR CCA 72 bp | GGATTGTTGAAGGCTATGGCATACACCACATTCTTGTaGCCCTCCAGGGTGTGCAGCTCCTCTCCAGACGCC | + |
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Preference number: 3 (lower is better) Translates to: GLLKAMAYTTFL*PSRVCSSSPDA Trigger: GGCGTCTGGAGAGGAGCTGCACACCCTGGAGGGCCACAAGAATGTGGTGTATGCCATAGCCTTCAACAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGAGCCCTTGGGTCAACGCCATATCCTGCAGGAGTTGTCCTTGCTGCCTGTAAGAGAGCAATCCCAATaGAACAAGGCGCTGCTGATC | + |
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Preference number: 3 (lower is better) Translates to: AEPLGQRHILQELSLLPVREQSQ*NKALLI Trigger: GATCAGCAGCGCCTTGTTCAATTGGGATTGCTCTCT...TACAGGCAGCAAGGACAACTCCTGCAGGATATGGCGTTGACCCAAGGGCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGATTCTGGCTGTCTTATCAGAGCTGCCCGTCAGGAGCCGGTTTCCTTGGCACAACATGCAGGTCTaGTCCATGGAGCCTGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: SQILAVLSELPVRSRFPWHNMQV*SMEPVS Trigger: ACTAACAGGCTCCATGGACAAGACCTGCATGTTGTG...CCAAGGAAACCGGCTCCTGACGGGCAGCTCTGATAAGACAGCCAGAATCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR GCA 72 bp | GGAGTTCAAGTTCTTGATCACTGTTGCCAACAGCCCTaGTCCATAGCAGAGCCCTTGGGTCAACGCCATATC | + |
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Preference number: 3 (lower is better) Translates to: GVQVLDHCCQQP*SIAEPLGQRHI Trigger: GATATGGCGTTGACCCAAGGGCTCTGCTATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGGCACTGGCCAGTCTGAACATCCCAGATTCTGGCTGTCTTATCAGAGCTTGTTCCATGGATAAGTaGCATGAAAAGAGGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LEALASLNIPDSGCLIRACSMDK*HEKRQR Trigger: CCTCTGCCTCTTTTCATGCAACTTATCCATGGAACA...AGCTCTGATAAGACAGCCAGAATCTGGGATGTTCAGACTGGCCAGTGCCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR TCA 72 bp | GACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTaGTCACTGTTGCCAACAGCCCTGCTCCATAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: DIGSLALWSSSS*SLLPTALLHSR Trigger: TCTGCTATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000149342.8 |
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| 3UTR GCA 72 bp | GGTCCGATCATAGCTTCCGGTGATAAAGCAGGAGCCTaGTTTGTTGAGTGCCACGTTGGTCAATGGCAATAT | + |
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Preference number: 3 (lower is better) Translates to: GPIIASGDKAGA*FVECHVGQWQY Trigger: ATATTGCCATTGACCAACGTGGCACTCAACAAAGCAGGCTCCTGCTTTATCACCGGAAGCTATGATCGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR CCA 72 bp | GTCTTATCAGAGCTGCCCGTCAGGAGCCGGTTTCCTTaGGGATTGAAGGAGATCTTTGAGATTTCTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: VLSELPVRSRFP*GLKEIFEISPS Trigger: TGAAGGAGAAATCTCAAAGATCTCCTTCAATCCCCAAGGAAACCGGCTCCTGACGGGCAGCTCTGATAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR TCA 72 bp | CAGGAGCCGGTTTCCTTGGGGATTGAAGGAGATCTTTaGGATTTCTCCTTCATGGCCTTCCAGTTTGGTTAC | + |
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Preference number: 3 (lower is better) Translates to: QEPVSLGIEGDL*DFSFMAFQFGY Trigger: GTAACCAAACTGGAAGGCCATGAAGGAGAAATCTCAAAGATCTCCTTCAATCCCCAAGGAAACCGGCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR TCA 72 bp | AAGACCCCGTGGCAATTTTATCACCGTAAGGATTGTTaGAGGCTATGGCATACACCACATTCTTGTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: KTPWQFYHRKDC*RLWHTPHSCGP Trigger: AGGGCCACAAGAATGTGGTGTATGCCATAGCCTTCAACAATCCTTACGGTGATAAAATTGCCACGGGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR TCA 72 bp | TCCCAATTGAACAAGGCGCTGCTGATCTCAGCACAGTaGCCAATTAAAGTGTGCACCTTCCTTCCAGTACTA | + |
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Preference number: 3 (lower is better) Translates to: SQLNKALLISAQ*PIKVCTFLPVL Trigger: TAGTACTGGAAGGAAGGTGCACACTTTAATTGGTCACTGTGCTGAGATCAGCAGCGCCTTGTTCAATTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR CCA 72 bp | TTCCTTCCAGTACTAGCATCCCATACTACAACTGTGTaGTCAAAGGACCCTGTGATGATTCTGTCTCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: FLPVLASHTTTV*SKDPVMILSPE Trigger: CTCAGGAGACAGAATCATCACAGGGTCCTTTGACCACACAGTTGTAGTATGGGATGCTAGTACTGGAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR TCA 72 bp | GAAGGCTCATTGGTTTTCATGGTCATGTCTGTAAGGTaGAGGACAGGCTGTTCCATGGATAAGTTGCATGAA | + |
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Preference number: 3 (lower is better) Translates to: EGSLVFMVMSVR*RTGCSMDKLHE Trigger: TTCATGCAACTTATCCATGGAACAGCCTGTCCTTCACCTTACAGACATGACCATGAAAACCAATGAGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000149342.8 |
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| 3UTR GCA 72 bp | GGTTACACACTTTCTTGTGGTTGCATTGTAAACTCTTaGCGTTCCATCGGCAGAAGCTGTTGCGATAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: GYTLSCGCIVNS*RSIGRSCCDKF Trigger: AAACTTATCGCAACAGCTTCTGCCGATGGAACGGCAAGAGTTTACAATGCAACCACAAGAAAGTGTGTAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR CCA 72 bp | GTAGTATCCATACTTCCAGTAGCAACCACTGTACTTTaGGGGTTGAATGATAAACATACAATCTCTGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VVSILPVATTVL*GLNDKHTISAV Trigger: CACAGCAGAGATTGTATGTTTATCATTCAACCCCCAAAGTACAGTGGTTGCTACTGGAAGTATGGATACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| 3UTR-3UTR CAA 90 bp | GTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATTCTGGAGTTCAAGTTCTaGATCACTGTTGCCAACAGC | + |
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Preference number: 3 (lower is better) Translates to: VICQYPGAIETQNTTETILEFKF*ITVANS Trigger: GCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAG...AATTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000149342.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAATGGTGAAGGCTCATaGGTTTTCATGGTCATGTCT | + |
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Preference number: 3 (lower is better) Translates to: SDVICQYPGAIETQNTTENGEGS*VFMVMS Trigger: AGACATGACCATGAAAACCAATGAGCCTTCACCATT...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000149342.8 |
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| 3UTR CAA 72 bp | CACTGTTGCCAACAGCCCTGCTCCATAGCAGAGCCCTaGGGTCAACGCCATATCCTGCAGGAGTTGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HCCQQPCSIAEP*GQRHILQELSL Trigger: CAAGGACAACTCCTGCAGGATATGGCGTTGACCCAAGGGCTCTGCTATGGAGCAGGGCTGTTGGCAACAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| CDS-3UTR TCA 90 bp | GCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTGCCAACAGCCCTGCAGGCACTGGCCAGTCTaGACATCCCAGATTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: AHLLSGVQVLDHCCQQPCRHWPV*TSQILA Trigger: AGCCAGAATCTGGGATGTTCAGACTGGCCAGTGCCT...GCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAAGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTTACACCACATTCTTGTaGCCCTCCAGGGTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GRGHRLTCSLEFKFLITVYTTFL*PSRVCS Trigger: GCTGCACACCCTGGAGGGCCACAAGAATGTGGTGTA...AACAGTGATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTCCTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR TCA 90 bp | AAAAGAGGCAGAGGACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCAGGCACTGGCCAGTCTaGACATCCCAGATTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KRGRGHRLTCSLEFKFLIRHWPV*TSQILA Trigger: AGCCAGAATCTGGGATGTTCAGACTGGCCAGTGCCT...GATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTCCTCTGCCTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| 3UTR CAA 72 bp | GCAGAGCCCTTGGGTCAACGCCATATCCTGCAGGAGTaGTCCTTGCTGCCTGTAATGACTATATTCCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: AEPLGQRHILQE*SLLPVMTIFPL Trigger: TAAAGGGAATATAGTCATTACAGGCAGCAAGGACAACTCCTGCAGGATATGGCGTTGACCCAAGGGCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
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| CDS-3UTR TCA 90 bp | AAAAGAGGCAGAGGACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCTGTCTGAGTTTCTCCTaGAGCCTCTGCACTAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: KRGRGHRLTCSLEFKFLICLSFS*SLCTRS Trigger: ACTCCTAGTGCAGAGGCTTCAGGAGAAACTCAGACA...GATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTCCTCTGCCTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000149342.8 |
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| CDS-3UTR TCA 90 bp | GCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTGCCAACAGCCCTGCATTGAAGGAGATCTTTaGGATTTCTCCTTCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: AHLLSGVQVLDHCCQQPCIEGDL*DFSFMA Trigger: GGCCATGAAGGAGAAATCTCAAAGATCTCCTTCAAT...GCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAAGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR CCA 90 bp | GCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTGCCAACAGCCCTGCGAGATTTCTCCTTCATaGCCTTCCAGTTTGGTTACA | + |
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Preference number: 4 (lower is better) Translates to: AHLLSGVQVLDHCCQQPCEISPS*PSSLVT Trigger: TGTAACCAAACTGGAAGGCCATGAAGGAGAAATCTC...GCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAAGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTGAACATCCCAGATTCTaGCTGTCTTATCAGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRGHRLTCSLEFKFLITVEHPRF*LSYQSC Trigger: GCAGCTCTGATAAGACAGCCAGAATCTGGGATGTTC...AACAGTGATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTCCTCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR TCA 90 bp | GCTGTAGTATCCATACTTCCAGTAGCAACCACTGTACTTTGGGGGTTGAATGATTGTCTGAGTTTCTCCTaGAGCCTCTGCACTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AVVSILPVATTVLWGLNDCLSFS*SLCTRS Trigger: ACTCCTAGTGCAGAGGCTTCAGGAGAAACTCAGACA...ATCATTCAACCCCCAAAGTACAGTGGTTGCTACTGGAAGTATGGATACTACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTGCCAACAGCCCTGCTCCATACAAACGACAAGGAAATaGTTTCTGCCAAATGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGVQVLDHCCQQPCSIQTTRK*FLPNDR Trigger: CCGGTCATTTGGCAGAAATCATTTCCTTGTCGTTTG...TATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065403.7 |
||
| CDS-3UTR GCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAACTGTCTTATCAGAGCTaGCCGTCAGGAGCCGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDVICQYPGAIETQNTTELSYQS*PSGAGF Trigger: GAAACCGGCTCCTGACGGGCAGCTCTGATAAGACAG...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTGCCAACAGCCCTGCTCCATATGCAGGTCTTGTCCATaGAGCCTGTTAGTATTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGVQVLDHCCQQPCSICRSCP*SLLVLE Trigger: CTCTAATACTAACAGGCTCCATGGACAAGACCTGCA...TATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
||
| 3UTR CAA 72 bp | CATGGCCTTCCAGTTTGGTTACACACTTTCTTGTGGTaGCATTGTAAACTCTTGCCGTTCCATCGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HGLPVWLHTFLW*HCKLLPFHRQK Trigger: CTTCTGCCGATGGAACGGCAAGAGTTTACAATGCAACCACAAGAAAGTGTGTAACCAAACTGGAAGGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAACTGCTGTGTGGCCCCTaGAGGTATGGTAACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDVICQYPGAIETQNTTELLCGP*RYGNTF Trigger: GAAAGTGTTACCATACCTTCAGGGGCCACACAGCAG...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065403.7 |
||
| CDS-3UTR TCA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAAAGGCACTGGCCAGTCTaGACATCCCAGATTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSFVSILALLKHKTQQKQRHWPV*TSQILA Trigger: AGCCAGAATCTGGGATGTTCAGACTGGCCAGTGCCT...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAACCGTGTCCCACACCTTaGAGGTCCGATCATAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSFVSILALLKHKTQQKQPCPTP*RSDHSF Trigger: GAAGCTATGATCGGACCTGCAAGGTGTGGGACACGG...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTGCCAACAGCCCTGCTCCATATTCCAGCATAATTCCTaGTGGGTAATAGCGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSGVQVLDHCCQQPCSIFQHNS*WVIAKQ Trigger: TTGCTTCGCTATTACCCACCAGGAATTATGCTGGAA...TATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000149342.8 |
||
| 3UTR CAA 72 bp | TCCATACTTCCAGTAGCAACCACTGTACTTTGGGGGTaGAATGATAAACATACAATCTCTGCTGTGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SILPVATTVLWG*NDKHTISAVWP Trigger: GGGCCACACAGCAGAGATTGTATGTTTATCATTCAACCCCCAAAGTACAGTGGTTGCTACTGGAAGTATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
||
| 3UTR CAA 72 bp | TATTTCCCACTTGTAGCATCCCACAACATGCAGGTCTaGTCCATGGAGCCTGTTAGTATTAGAGAGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: YFPLVASHNMQV*SMEPVSIREQS Trigger: GGATTGCTCTCTAATACTAACAGGCTCCATGGACAAGACCTGCATGTTGTGGGATGCTACAAGTGGGAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149342.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAATGTCTGAGTTTCTCCTaGAGCCTCTGCACTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDVICQYPGAIETQNTTECLSFS*SLCTRS Trigger: ACTCCTAGTGCAGAGGCTTCAGGAGAAACTCAGACA...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 ENSMUST00000149342.8 |
||
| CDS-3UTR TCA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACACCGTAAGGATTGTTaGAGGCTATGGCATACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSFVSILALLKHKTQQKHRKDC*RLWHTP Trigger: TGGTGTATGCCATAGCCTTCAACAATCCTTACGGTG...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065403.7 |
||
| CDS-3UTR TCA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAGATGATTCTGTCTCCTaGGGTGTCAAACGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSFVSILALLKHKTQQKDDSVS*GVKRQG Trigger: TCCTTGTCGTTTGACACCTCAGGAGACAGAATCATC...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065403.7 |
||
| CDS-3UTR TCA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAATCCCGTAAGGATTGTTaGAGGCTATGGCATACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSFVSILALLKHKTQQKSRKDC*RLWHTP Trigger: TGGTGTATGCCATAGCCTTCAACAATCCTTACGGGA...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAACCGTGTCCCACACCTTaGAGGTCCGATCATAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQQKQLVIFNTYYACSCQPCPTP*RSDHSF Trigger: GAAGCTATGATCGGACCTGCAAGGTGTGGGACACGG...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAATGCATTGTAAACTCTTaGCGTTCCATCGGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDVICQYPGAIETQNTTECIVNS*RSIGRS Trigger: GCTTCTGCCGATGGAACGGCAAGAGTTTACAATGCA...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAATGCATTGTAAACTCTTaGCGTTCCATCGGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSFVSILALLKHKTQQKCIVNS*RSIGRS Trigger: GCTTCTGCCGATGGAACGGCAAGAGTTTACAATGCA...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAACTGTCTTATCAGAGCTaGCCGTCAGGAGCCGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQQKQLVIFNTYYACSCQLSYQS*PSGAGF Trigger: GAAACCGGCTCCTGACGGGCAGCTCTGATAAGACAG...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAATATTTCATCAGTGTaGCCCTCAAGGACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDVICQYPGAIETQNTTENISSV*PSRTWR Trigger: CCTCCAGGTCCTTGAGGGGCACACTGATGAAATATT...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAGTTCTTGATCACTGTTaGCAACAGCCCTGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LTSFVSILALLKHKTQQKVLDHC*QQPCSI Trigger: TATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAAC...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAATGCCACGTTGGTCAATaGCAATATGTGTGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSFVSILALLKHKTQQKCHVGQ*QYVCSE Trigger: CTCAGAGCACACATATTGCCATTGACCAACGTGGCA...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAATGCCACGTTGGTCAATaGCAATATGTGTGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDVICQYPGAIETQNTTECHVGQ*QYVCSE Trigger: CTCAGAGCACACATATTGCCATTGACCAACGTGGCA...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAATACACCACATTCTTGTaGCCCTCCAGGGTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQQKQLVIFNTYYACSCQYTTFL*PSRVCS Trigger: GCTGCACACCCTGGAGGGCCACAAGAATGTGGTGTA...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGAGGCAGAGGACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCGCAACCACTGTACTTTaGGGGTTGAATGATAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KRGRGHRLTCSLEFKFLIATTVL*GLNDKH Trigger: ATGTTTATCATTCAACCCCCAAAGTACAGTGGTTGC...GATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTCCTCTGCCTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065403.7 |
||
| CDS-3UTR GCA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATGCATTGTAAACTCTTaGCGTTCCATCGGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSFVSILALLKHKTQQKQCIVNS*RSIGRS Trigger: GCTTCTGCCGATGGAACGGCAAGAGTTTACAATGCA...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAAAATATTTCATCAGTGTaGCCCTCAAGGACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSFVSILALLKHKTQQKQNISSV*PSRTWR Trigger: CCTCCAGGTCCTTGAGGGGCACACTGATGAAATATT...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | GTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATTGTCAACGCCATATCCTaGAGGAGTTGTCCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VICQYPGAIETQNTTETIVNAIS*RSCPCC Trigger: ACAGCAAGGACAACTCCTGCAGGATATGGCGTTGAC...AATTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAATGCAGGTCTTGTCCATaGAGCCTGTTAGTATTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSFVSILALLKHKTQQKCRSCP*SLLVLE Trigger: CTCTAATACTAACAGGCTCCATGGACAAGACCTGCA...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR TCA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAATGTCTGAGTTTCTCCTaGAGCCTCTGCACTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQQKQLVIFNTYYACSCQCLSFS*SLCTRS Trigger: ACTCCTAGTGCAGAGGCTTCAGGAGAAACTCAGACA...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 ENSMUST00000149342.8 |
||
| CDS-3UTR CCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAATTCCAGCATAATTCCTaGTGGGTAATAGCGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDVICQYPGAIETQNTTEFQHNS*WVIAKQ Trigger: TTGCTTCGCTATTACCCACCAGGAATTATGCTGGAA...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 ENSMUST00000149342.8 |
||
| CDS-3UTR CCA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATGCAGGTCTTGTCCATaGAGCCTGTTAGTATTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSFVSILALLKHKTQQKQCRSCP*SLLVLE Trigger: CTCTAATACTAACAGGCTCCATGGACAAGACCTGCA...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAAAGGATCTCATCGTCATaGCCTGTTAAGGTTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: TSFVSILALLKHKTQQKQRISSS*PVKVAT Trigger: TGTAGCAACCTTAACAGGCCATGACGATGAGATCCT...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAACATGGCCTTCCAGTTTaGTTACACACTTTCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSFVSILALLKHKTQQKQHGLPV*LHTFLW Trigger: CCACAAGAAAGTGTGTAACCAAACTGGAAGGCCATG...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAGAGATTTCTCCTTCATaGCCTTCCAGTTTGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LTSFVSILALLKHKTQQKEISPS*PSSLVT Trigger: TGTAACCAAACTGGAAGGCCATGAAGGAGAAATCTC...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | GTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATTGAACATCCCAGATTCTaGCTGTCTTATCAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VICQYPGAIETQNTTETIEHPRF*LSYQSC Trigger: GCAGCTCTGATAAGACAGCCAGAATCTGGGATGTTC...AATTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR TCA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAAATTGAAGGAGATCTTTaGGATTTCTCCTTCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSFVSILALLKHKTQQKQIEGDL*DFSFMA Trigger: GGCCATGAAGGAGAAATCTCAAAGATCTCCTTCAAT...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR TCA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAATCCCGTAAGGATTGTTaGAGGCTATGGCATACACCA | + |
|
Preference number: 4 (lower is better) Translates to: TQQKQLVIFNTYYACSCQSRKDC*RLWHTP Trigger: TGGTGTATGCCATAGCCTTCAACAATCCTTACGGGA...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAACACTTTCTTGTGGTTaGATTGTAAACTCTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSFVSILALLKHKTQQKTLSCG*IVNSCR Trigger: ACGGCAAGAGTTTACAATGCAACCACAAGAAAGTGT...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACACTTTCTTGTGGTTaGATTGTAAACTCTTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SDVICQYPGAIETQNTTETLSCG*IVNSCR Trigger: ACGGCAAGAGTTTACAATGCAACCACAAGAAAGTGT...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | GTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATTAGGATCTCATCGTCATaGCCTGTTAAGGTTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: VICQYPGAIETQNTTETIRISSS*PVKVAT Trigger: TGTAGCAACCTTAACAGGCCATGACGATGAGATCCT...AATTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR CCA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAAGAGATTTCTCCTTCATaGCCTTCCAGTTTGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: TSFVSILALLKHKTQQKQEISPS*PSSLVT Trigger: TGTAACCAAACTGGAAGGCCATGAAGGAGAAATCTC...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
||
| CDS-3UTR GCA 90 bp | GTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATTGTTCCATGGATAAGTTaGATGAAAAGAGGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VICQYPGAIETQNTTETIVPWIS*MKRGRG Trigger: TCCTCTGCCTCTTTTCATGCAACTTATCCATGGAAC...AATTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113436.8 |
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| CDS-3UTR CCA 90 bp | GTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATTTTCCAGCATAATTCCTaGTGGGTAATAGCGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: VICQYPGAIETQNTTETIFQHNS*WVIAKQ Trigger: TTGCTTCGCTATTACCCACCAGGAATTATGCTGGAA...AATTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 ENSMUST00000149342.8 |
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| CDS-3UTR CCA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAACATGGCCTTCCAGTTTaGTTACACACTTTCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TQQKQLVIFNTYYACSCQHGLPV*LHTFLW Trigger: CCACAAGAAAGTGTGTAACCAAACTGGAAGGCCATG...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR GCA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAATGCAGGAGTTGTCCTTaGTGTAATGACTATATTCCC | + |
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Preference number: 4 (lower is better) Translates to: TQQKQLVIFNTYYACSCQCRSCP*CNDYIP Trigger: GGGAATATAGTCATTACAGCAAGGACAACTCCTGCA...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113436.8 |
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| CDS-3UTR GCA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAAACACTTTCTTGTGGTTaGATTGTAAACTCTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: TQQKQLVIFNTYYACSCQTLSCG*IVNSCR Trigger: ACGGCAAGAGTTTACAATGCAACCACAAGAAAGTGT...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS TCA 90 bp | CAGCACAGTGACCAATTAAAGTGTGCACCTTCCCGTAAGGATTGTTaGAGGCTATGGCATACACCACATTCTTGTGGCCCTCCAGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: QHSDQLKCAPSRKDC*RLWHTPHSCGPPGC Trigger: ACACCCTGGAGGGCCACAAGAATGTGGTGTATGCCATAGCCTTCAACAATCCTTACGGGAAGGTGCACACTTTAATTGGTCACTGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTCAGGAGCCGGTTTCCTaGGGGATTGAAGGAGATCTT | + |
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Preference number: 5 (lower is better) Translates to: GRGHRLTCSLEFKFLITVQEPVS*GIEGDL Trigger: AAGATCTCCTTCAATCCCCAAGGAAACCGGCTCCTG...AACAGTGATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTCCTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR CAA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAGCATACACCACATTCTaGTGGCCCTCCAGGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LTSFVSILALLKHKTQQKAYTTF*WPSRVC Trigger: GCACACCCTGGAGGGCCACAAGAATGTGGTGTATGC...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTTTGCATTGTAAACTCTaGCCGTTCCATCGGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GRGHRLTCSLEFKFLITVLHCKL*PFHRQK Trigger: CTTCTGCCGATGGAACGGCAAGAGTTTACAATGCAA...AACAGTGATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTCCTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR CAA 90 bp | AAAAGAGGCAGAGGACATAGGCTCACTTGCTCTCTGGAGTTCAAGTTCTTGATCTTGCATTGTAAACTCTaGCCGTTCCATCGGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: KRGRGHRLTCSLEFKFLILHCKL*PFHRQK Trigger: CTTCTGCCGATGGAACGGCAAGAGTTTACAATGCAA...GATCAAGAACTTGAACTCCAGAGAGCAAGTGAGCCTATGTCCTCTGCCTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR CAA 90 bp | TTGCTCTCTGGAGTTCAAGTTCTTGATCACTGTTGCCAACAGCCCTGCTCCATACGGTTTCCTTGGGGATaGAAGGAGATCTTTGAGATT | + |
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Preference number: 5 (lower is better) Translates to: LLSGVQVLDHCCQQPCSIRFPWG*KEIFEI Trigger: AATCTCAAAGATCTCCTTCAATCCCCAAGGAAACCG...TATGGAGCAGGGCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAGAGAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR CAA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAATCCATAGCAGAGCCCTaGGGTCAACGCCATATCCTG | + |
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Preference number: 5 (lower is better) Translates to: LTSFVSILALLKHKTQQKSIAEP*GQRHIL Trigger: CAGGATATGGCGTTGACCCAAGGGCTCTGCTATGGA...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAAGCATACACCACATTCTaGTGGCCCTCCAGGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: TQQKQLVIFNTYYACSCQAYTTF*WPSRVC Trigger: GCACACCCTGGAGGGCCACAAGAATGTGGTGTATGC...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAGAGTTTACAGGTCTaGTCAAAAGACCCCGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LTSFVSILALLKHKTQQKQSLQV*SKDPVA Trigger: TGCCACGGGGTCTTTTGACAAGACCTGTAAACTCTG...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065403.7 |
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| CDS-3UTR CAA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAAGAGAGCAATCCCAATaGAACAAGGCGCTGCTGATC | + |
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Preference number: 5 (lower is better) Translates to: LTSFVSILALLKHKTQQKREQSQ*NKALLI Trigger: GATCAGCAGCGCCTTGTTCAATTGGGATTGCTCTCT...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | TCTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAAGAGAGCAATCCCAATaGAACAAGGCGCTGCTGATC | + |
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Preference number: 5 (lower is better) Translates to: SDVICQYPGAIETQNTTEREQSQ*NKALLI Trigger: GATCAGCAGCGCCTTGTTCAATTGGGATTGCTCTCT...TTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAACAGGAGCCGGTTTCCTaGGGGATTGAAGGAGATCTT | + |
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Preference number: 5 (lower is better) Translates to: TSFVSILALLKHKTQQKQQEPVS*GIEGDL Trigger: AAGATCTCCTTCAATCCCCAAGGAAACCGGCTCCTG...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACATATCCTGCAGGAGTaGTCCTTGCTGCCTGTAATG | + |
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Preference number: 5 (lower is better) Translates to: LTSFVSILALLKHKTQQKHILQE*SLLPVM Trigger: CATTACAGGCAGCAAGGACAACTCCTGCAGGATATG...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 |
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| CDS-3UTR CAA 90 bp | GTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATTCAGGAGCCGGTTTCCTaGGGGATTGAAGGAGATCTT | + |
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Preference number: 5 (lower is better) Translates to: VICQYPGAIETQNTTETIQEPVS*GIEGDL Trigger: AAGATCTCCTTCAATCCCCAAGGAAACCGGCTCCTG...AATTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | CTGACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACTGGAGTTCAAGTTCTaGATCACTGTTGCCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: LTSFVSILALLKHKTQQKLEFKF*ITVANS Trigger: GCTGTTGGCAACAGTGATCAAGAACTTGAACTCCAG...TTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | GTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATTCACAACATGCAGGTCTaGTCCATGGAGCCTGTTAGT | + |
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Preference number: 5 (lower is better) Translates to: VICQYPGAIETQNTTETIHNMQV*SMEPVS Trigger: ACTAACAGGCTCCATGGACAAGACCTGCATGTTGTG...AATTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATTGCATTGTAAACTCTaGCCGTTCCATCGGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: TSFVSILALLKHKTQQKQLHCKL*PFHRQK Trigger: CTTCTGCCGATGGAACGGCAAGAGTTTACAATGCAA...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAACACAACATGCAGGTCTaGTCCATGGAGCCTGTTAGT | + |
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Preference number: 5 (lower is better) Translates to: TQQKQLVIFNTYYACSCQHNMQV*SMEPVS Trigger: ACTAACAGGCTCCATGGACAAGACCTGCATGTTGTG...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | ACGTCATTTGTCAGTATCCTGGCGCTATTGAAACACAAAACACAACAGAAACAATGTTCCATGGATAAGTaGCATGAAAAGAGGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: TSFVSILALLKHKTQQKQCSMDK*HEKRQR Trigger: CCTCTGCCTCTTTTCATGCAACTTATCCATGGAACA...TTGTTTCTGTTGTGTTTTGTGTTTCAATAGCGCCAGGATACTGACAAATGACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113436.8 |
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| CDS-3UTR CAA 90 bp | ACACAACAGAAACAATTAGTGATATTTAACACATATTATGCCTGCTCCTGCCAACGGTTTCCTTGGGGATaGAAGGAGATCTTTGAGATT | + |
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Preference number: 5 (lower is better) Translates to: TQQKQLVIFNTYYACSCQRFPWG*KEIFEI Trigger: AATCTCAAAGATCTCCTTCAATCCCCAAGGAAACCG...TTGGCAGGAGCAGGCATAATATGTGTTAAATATCACTAATTGTTTCTGTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS CAA 90 bp | GCTGTGATCAGAGGCTCTGCTTGCTGGATCTCTCCTACTAGGGTGTaGACATCAGTACTAGGACTGAGCTCAAGTAAATCTATGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: AVIRGSACWISPTRV*TSVLGLSSSKSMDF Trigger: GAAATCCATAGATTTACTTGAGCTCAGTCCTAGTACTGATGTCAACACCCTAGTAGGAGAGATCCAGCAAGCAGAGCCTCTGATCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS TCA 72 bp | GACCAATTAAAGTGTGCACCTTCCCGTAAGGATTGTTaGAGGCTATGGCATACACCACATTCTTGTGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: DQLKCAPSRKDC*RLWHTPHSCGP Trigger: AGGGCCACAAGAATGTGGTGTATGCCATAGCCTTCAACAATCCTTACGGGAAGGTGCACACTTTAATTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065436.10 ENSMUST00000113436.8 |
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| CDS CCA 72 bp | TTCTCCACCTTTTTCATATTCCAGCATAATTCCTGGTaGGTAATAGCGAAGCAAGAGGCTCTTAAGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: FSTFFIFQHNSW*VIAKQEALKLH Trigger: ATGAAGCTTAAGAGCCTCTTGCTTCGCTATTACCCACCAGGAATTATGCTGGAATATGAAAAAGGTGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065403.7 ENSMUST00000065436.10 ENSMUST00000113436.8 ENSMUST00000149342.8 |
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